mRNA_L-elsbetiae_contig11923.1650.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: A0A6H5KFA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFA2_9PHAE) HSP 1 Score: 303 bits (775), Expect = 1.120e-96 Identity = 153/262 (58.40%), Postives = 196/262 (74.81%), Query Frame = 3 Query: 531 IVLAALLAALLLCNAICF--FMFKRRKXXXXXXXXXPVGTRDANADLELGRLQGNLAAERNRRIRAEAIIQRAKGGGIRPGDFPSVRDVDRDVEKLAEHAIKWTEKAGAIGGSHFALPATLQSVLENTFLVCREEVTRCFDEKLLSLSEFLGNDEPIVLSGGDSMNLDTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDFNDDLGKSRAFDPAVH 1310 + L+ LLAAL+L N CF F+ +RRK G RDAN ++ELGRL+ +L E +RR++AE ++ RAKGGG+R GDFPSVRDV + V +LA+ A+ WTEKA A+GGSH A+ T+ SVL NTFLVCREEV RC DE+L +LS FLGNDEPI+LS GD MNLDTQYVLYECL +++++IVP +P+RM+ LAG V +RC AD LA+ I+SG AWP+FE LMKNY++VFVEMALQ P ++F D+LG + FD VH Sbjct: 49 VALSVLLAALVLGNIACFAWFLMRRRKEPPTPPS---AGRRDANTEVELGRLRRDLETEHSRRVKAETLVHRAKGGGLRSGDFPSVRDVYQHVYQLADDALAWTEKACAVGGSHPAVNGTILSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMNALAGVVLRRCEEPADESLANEIISGPAWPSFEALMKNYLMVFVEMALQKPRVEFEDNLGDAVTFDSVVH 307
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: D7FSP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP0_ECTSI) HSP 1 Score: 306 bits (784), Expect = 8.520e-96 Identity = 162/260 (62.31%), Postives = 199/260 (76.54%), Query Frame = 3 Query: 531 IVLAALLAALLLCNAICFFMFKRRKXXXXXXXXXPVGTRDANADLELGRLQGNLAAERNRRIRAEAIIQRAKGGGIRPGDFPSVRDVDRDVEKLAEHAIKWTEKAGAIGGSHFALPATLQSVLENTFLVCREEVTRCFDEKLLSLSEFLGNDEPIVLSGGDSMNLDTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDFNDDLGKSRAFDPAVH 1310 I L+ LLAAL+L N CF R+ XXXXXXX P G RDAN ++ELGRL+ +L E RR++AE ++ RAKGGG+R GDFPSVRDV + V +LA+ A+ WTEKA A+GGSH AL T+ SVL NTFLVCREEV RC DE+L +LS FLGNDEPI+LS GD MNLDTQYVLYECL +++++IVP +P+RMD LAG V QRCG AD LA+ I+SG WP+FE LMKNY+LVFVEMALQ P ++F D+LG + FD +H Sbjct: 219 IALSVLLAALVLGNIACFAWCLMRRRXXXXXXX-PAGRRDANTEVELGRLRRDLETEHTRRVKAETLVHRAKGGGLRSGDFPSVRDVYQHVYQLADDALAWTEKACAVGGSHPALNGTVLSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMDALAGVVLQRCGEPADRSLANEILSGATWPSFEALMKNYLLVFVEMALQKPRVEFEDNLGDAMTFDSIIH 477
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: A0A6H5KA22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA22_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.640e-86 Identity = 153/262 (58.40%), Postives = 185/262 (70.61%), Query Frame = 3 Query: 525 GTIVLAALLAALLLCNAICFFMFKRRKXXXXXXXXXPVGTRDANADLELGRLQGNLAAERNRRIRAEAIIQRAKGGGIRPGDFPSVRDVDRDVEKLAEHAIKWTEKAGAIGGSHFALPATLQSVLENTFLVCREEVTRCFDEKLLSLSEFLGNDEPIVLSGGDSMNLDTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDFNDDLGKSRAFDPAVH 1310 G +VL+ +L AL+L NA XXXXXXX G A D+E+ RL+ +L E RR++AE +I R+ GGG+RPG FP VRDV + V LA+ A+ WTEKA A+GGS A T +SVL NTFLVCREEV RC DE+L +LS FLGNDEPI+LS GD +LDTQYVLYECL R +R IV EP+RMDELAG + QRCG AD LA+ I+SG WP+FE LMKNY+LVFVEM LQ P +DF D+LG + AFDPA H Sbjct: 23 GVVVLSGILGALVLGNAAWLACXXXXXXXXXXXXAGGYG---ATEDVEVDRLRRDLETEHTRRVKAETLIHRSSGGGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFAVGGSRQAWYGTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRKYRTIVSTEPDRMDELAGLILQRCGEPADRGLANEIMSGATWPSFEALMKNYLLVFVEMTLQKPGIDFEDNLGDNVAFDPAEH 281
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: D7FSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP1_ECTSI) HSP 1 Score: 262 bits (670), Expect = 1.370e-80 Identity = 135/224 (60.27%), Postives = 159/224 (70.98%), Query Frame = 3 Query: 639 GTRDANADLELGRLQGNLAAERNRRIRAEAIIQRAKGGGIRPGDFPSVRDVDRDVEKLAEHAIKWTEKAGAIGGSHFALPATLQSVLENTFLVCREEVTRCFDEKLLSLSEFLGNDEPIVLSGGDSMNLDTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDFNDDLGKSRAFDPAVH 1310 G A D+E+GRL+ +L E RR+ AE +I R+ GGG+RPG FPSV DV + V LA+ A+ WTEKA A+GGS T +SVL NTFLVCREEV RC DE+L LS FLGN EPI+LS GD +LD QYVLYECL R +R IV EP+RMDELA + QRCG AD LA+ I SG WP+FE LMKNY+LVFVEMALQ P +DF D LG + AFDPA H Sbjct: 108 GGHGATEDVEVGRLRRDLDTEHTRRVNAETLIHRSSGGGLRPGVFPSVGDVYQHVGHLADDALAWTEKAFAVGGSRQTWYGTTRSVLYNTFLVCREEVQRCLDERLQILSAFLGNAEPILLSAGDEKSLDPQYVLYECLCRKYRTIVSTEPDRMDELARLILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEMALQKPGIDFEDSLGDNVAFDPAEH 331
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: D7FRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD0_ECTSI) HSP 1 Score: 206 bits (524), Expect = 7.920e-59 Identity = 122/276 (44.20%), Postives = 171/276 (61.96%), Query Frame = 3 Query: 540 AALLAALLLCNAIC--FFMFKRRKXXXXXXXXXPVGTRDANADLELGRLQGNLAAERNRRIRAEA--------------IIQRAKGGGIRPG-DFPSVRDVDRDVEK-LAEHAIKWTEKAGAIGGSHFALPATLQSVLENTFLVCREEVTRCFDEKLLSLSEFLGNDEPIVLSGGDSMNLDTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDF-NDDLGKSRAFDPAVH 1310 A LL+AL+L N C ++ +R K G AD EL L+ +A E++RR AEA ++ R++ G+RPG DFPSVR V ++++ L + A++WTEK +GGS L AT+++VLE+TF VCR+E RC D +L + +E LG DEPI LSG SMNLDT+YVLY CL RN++ IV ++P ++ LA + QRC G D LA +I SG+A P F+ LMK+Y+ VF+ M LQ+PPM F +DDLG + FD ++H Sbjct: 66 AVLLSALVLGNVACAAWYFLRRCKTPPTRLPHHRSGI----ADAELDTLRKKVATEKSRRELAEADMEAARRQLNAYESLVLRSEVKGVRPGNDFPSVRSVLQEIKHGLIDDALRWTEKVSTLGGSQAGLTATIRAVLEHTFHVCRKEAMRCLDNRLRAFTECLGEDEPISLSGDKSMNLDTEYVLYTCLCRNYKTIVSMKPSQVQNLAVTIVQRCKGHED--LAGSITSGNARPFFDALMKHYLQVFIVMGLQNPPMGFKDDDLGMNTTFDGSLH 335
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: A0A6H5JCP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP3_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 7.690e-10 Identity = 64/246 (26.02%), Postives = 102/246 (41.46%), Query Frame = 3 Query: 666 ELGRLQGNLAAERNRRIRAEAIIQRAKGG------GIRPGDFPSVRDVDRDVEKLAEHAIKWTEKAGAIGGSHFALPATLQSVLENTFLVCREEVTRCFDEKLLSLSEFLGNDEPIVL--------SGGDSMNL-----------------DTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDFNDDLGKSRAFDPAVH 1310 ++ RL+ L ER+RR+ AE + G G+ GD ++ L + +K L + + S+L + F CR EV R ++ L F+G E + L +GG +L DT +LY LRR R I + + + L+ V R K ++ WP FE ++++Y+ +FVE ALQ P ++F++ GK FDP H Sbjct: 241 DIQRLRSLLDTERSRRMAAETALSVGGGSVSSRRSGMCGGDGSGETKAEQLYSSLGQPQQSREQKQKM-------LLSVVTSILVHLFHCCRVEVRRRLRVRVDGLRAFVGEAEFVQLGSIVSGPGTGGPKASLAAAAGAAGATPGGVMAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEIGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKH 479
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Match: D8LEG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG1_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 2.080e-7 Identity = 33/98 (33.67%), Postives = 50/98 (51.02%), Query Frame = 3 Query: 1017 MNLDTQYVLYECLRRNFRKIVPVEPERMDELAGEVQQRCGGAADGKLASAIVSGDAWPAFENLMKNYILVFVEMALQHPPMDFNDDLGKSRAFDPAVH 1310 M DT +LY LRR R I + + + L+ V R K ++ WP FE ++++Y+ +FVE ALQ P ++F++ GK FDP H Sbjct: 1 MAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEVGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKH 98 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11923.1650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11923.1650.1 >prot_L-elsbetiae_contig11923.1650.1 ID=prot_L-elsbetiae_contig11923.1650.1|Name=mRNA_L-elsbetiae_contig11923.1650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp MFKRRKKTPTPPPPAPVGTRDANADLELGRLQGNLAAERNRRIRAEAIIQback to top mRNA from alignment at L-elsbetiae_contig11923:1998..5086- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11923.1650.1 ID=mRNA_L-elsbetiae_contig11923.1650.1|Name=mRNA_L-elsbetiae_contig11923.1650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3089bp|location=Sequence derived from alignment at L-elsbetiae_contig11923:1998..5086- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11923:1998..5086- >mRNA_L-elsbetiae_contig11923.1650.1 ID=mRNA_L-elsbetiae_contig11923.1650.1|Name=mRNA_L-elsbetiae_contig11923.1650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig11923:1998..5086- (Laminarionema elsbetiae ELsaHSoW15)back to top |