mRNA_L-elsbetiae_contig11920.1648.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11920.1648.1
Unique NamemRNA_L-elsbetiae_contig11920.1648.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: D8LRG7_ECTSI (Sideroflexin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG7_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 6.400e-101
Identity = 178/223 (79.82%), Postives = 190/223 (85.20%), Query Frame = 1
Query:    1 QNTIFKSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEVR 669
            +N IFKSENDTHEFVAYFQKEMETKDGIISKLNDELIRKE                          +KEK LTNQIKNLEGDLSAL RFRELRD+H+KAMEDMAAAV+AKEQAHAQEMIDLERKLLTDK NLQKDLERVIEDVRRQAKIEAHSSLGGETKRI GENKRLAKELRFQMQMTTELQAHSK LE+QTT +ARDVAILN+KD+EYARQGQAK+KE++
Sbjct:   44 KNKIFKSENDTHEFVAYFQKEMETKDGIISKLNDELIRKER------------------------ANKEKALTNQIKNLEGDLSALVRFRELRDAHDKAMEDMAAAVKAKEQAHAQEMIDLERKLLTDKCNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIAGENKRLAKELRFQMQMTTELQAHSKTLEDQTTTTARDVAILNDKDQEYARQGQAKNKELK 242          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A7S2UZS8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZS8_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.640e-35
Identity = 85/221 (38.46%), Postives = 136/221 (61.54%), Query Frame = 1
Query:   10 IFKSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEVRT 672
            + KSE DTHEFVAYFQ+EME KD II+ L D L++KE E R   +        +L EVT    DKE+ L +++K ++ +L  L  FRE + S    M+ +       E+ H  +M   ERK L +K  +Q++ +R ++++R+ A++EA S L  +T++++ +N+R+ +ELRFQ+ M  ELQ   K +E + T+  R + +L EK++EYA Q   + KE++T
Sbjct:   66 LAKSEKDTHEFVAYFQREMENKDEIIANLKDNLVQKEVEFREEGQRKXXXXXEKLEEVTRGAGDKEEDLKSEVKRVKDELDKLEHFRENKTSLEMEMKHLREQNLRDEEKHVAQMTQHERKFLEEKAKMQREYDRQVQEMRQVARMEAQSGLDMDTRKVILDNRRMGEELRFQVAMMGELQTEKKIVESENTQQRRQMELLREKEQEYALQSHRQHKEIKT 286          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: F0Y4I6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4I6_AURAN)

HSP 1 Score: 130 bits (328), Expect = 2.620e-32
Identity = 79/216 (36.57%), Postives = 131/216 (60.65%), Query Frame = 1
Query:   22 ENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEVR 669
            E DTHEFVAYFQKE+E KD  I  LN+ +  +++E +     +  +   ++A++  ++   +   T +I+ LE +L+ +  FRE++ + +  +E+   A++  E+ H  E    ERK L +K  +QKDLE+   D+RR AK E  + L  +T +++GEN+R+A+ELRFQ QMT ELQ+    ++E      RD+ +  EK+ EYA+Q   K++E +
Sbjct:    3 EKDTHEFVAYFQKELEGKDVRIHSLNELMAHQDAERQAEHDALVRRQSEQVADLETKLQTADTTSTAKIQMLEDELAKVDTFREMKLAMDAKIEEQEKALKLAEERHLAEATANERKFLAEKSKMQKDLEKRTSDIRRAAKQEMQNGLDADTLKVIGENRRMAEELRFQQQMTAELQSEKNAVDEAVRVLRRDMELAREKEGEYAKQSHVKNREAK 218          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A067C952_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C952_SAPPC)

HSP 1 Score: 127 bits (320), Expect = 7.240e-31
Identity = 81/218 (37.16%), Postives = 134/218 (61.47%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEVR 669
            K E + HEFVAYFQ+E+ T++ I +KL +EL   +      V+    K   E  ++ E     E  L++++K  + DLS L  FR++R++  K +  +  A+E++  AH   +  LERK L +K   QKD E+ IE +++Q++ +A + L  +T++IV +NKR+  ELRFQ+QMT ELQ     L EQT    R++ + +EK++EYA+ GQ +++E++
Sbjct:   55 KGEKEIHEFVAYFQRELGTREKIAAKLTEELNETKQRHTDDVEAWHSKYDSETKQLKETNRSLESSLSSKLKIAQEDLSKLEVFRDMRETLEKKLNAVTDALESERVAHKDAVSVLERKFLEEKARAQKDTEKRIEKIKQQSREDARNILDADTRKIVTDNKRMGDELRFQLQMTDELQREKDKLVEQTKALQRELQLHDEKEQEYAKYGQRQTREIK 272          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A1V9ZQC9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQC9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.600e-29
Identity = 77/218 (35.32%), Postives = 132/218 (60.55%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEVR 669
            KSE + HEFVAYFQ+E+  ++ I +KL +EL   +S+    ++    K   +  ++ E     E  L++++K  + DLS L  FR++R+   K +  +   +EA+  AH + +  +ERK L +K   QKD E+ IE +++Q++ +A + L  +T++IV +NKR+ +ELRFQ+QMT ELQ     L  Q      +V +  +K++EYA+ GQ +++E+R
Sbjct:   43 KSEKEVHEFVAYFQRELGNREKIAAKLTEELNETKSKHTEDMESWHVKYDMDTKQLKETSRSLESTLSSKLKISQEDLSKLEIFRDMREVLEKRLNTVTETLEAERTAHKETIAMMERKFLEEKARAQKDTEKRIEKIKQQSREDARNILDADTRKIVTDNKRMGEELRFQLQMTDELQREKDKLINQNKALTCEVQMHADKEQEYAKYGQRQTREIR 260          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A662WS35_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS35_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.650e-29
Identity = 81/217 (37.33%), Postives = 132/217 (60.83%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEV 666
            K E +THEFVAYFQKE++T+D  ++KL +EL        +T++ MQ+    E   +T+Q    E+    Q+  L  +L  L  FRE++DS    M+D+ A +  +++   +    LERK L +K  LQK+ E+ IE V++QAK +A + L  +T++IV +NKR+ +ELRFQ+QMT ELQ   +  E +      ++ +  +K+ E+ARQ Q +++E+
Sbjct:   54 KREQETHEFVAYFQKEIQTRDKQLTKLGEELATVRLSHALTLEQMQQTRDAERQHLTQQAAANEEASAEQLFYLREELHQLELFREMKDSVAAKMKDLEAQLVLEKEKARETDGALERKFLEEKARLQKEHEKKIEVVKQQAKEDARNGLDADTRKIVTDNKRMGEELRFQLQMTEELQREKQHFEARAKTLQVELQLQVQKEGEFARQAQRQTREL 270          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A662X256_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X256_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.680e-28
Identity = 86/218 (39.45%), Postives = 132/218 (60.55%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAA-VEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEV 666
            K E +THEFVAYFQKE++T+D  ++KL +EL        + ++ MQ+    E   +T+Q    E+    Q+  L  +L  L  FRE++DS    M+D+ A  V  KEQA   +   LERK L +K  LQK+ E+ IE V++QAK +A + L  +T++IV +NKR+ +ELRFQ+QMT ELQ   +  E +      ++ +  +K+ EYARQ Q +++E+
Sbjct:  255 KREQETHEFVAYFQKEIQTRDKQLTKLGEELATARLTHALMLEQMQQTRDAERQHLTQQAAANEEASAEQLFYLREELHQLELFREMKDSIAAKMKDLEAQLVLEKEQARESDGA-LERKFLEEKARLQKEHEKKIEVVKQQAKEDARNGLDADTRKIVTDNKRMGEELRFQLQMTEELQREKQHFEARAKTLQVELQLQVQKEGEYARQAQRQTREL 471          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: H3HBU3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBU3_PHYRM)

HSP 1 Score: 120 bits (301), Expect = 2.580e-28
Identity = 78/217 (35.94%), Postives = 129/217 (59.45%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEV 666
            K E +THEFVAYFQKE++T+D  ++KL +EL        + ++ MQ+    +   + +Q T KE+  + QI  L  +L  L  FRE++DS    ++D+   +  + +   +    LERK L +K  LQK+ E+ IE V++QAK +A + L  +T++IV +NKR+ +ELRFQ+QMT ELQ   +  E +      ++    +K+ E+A+Q Q  ++E+
Sbjct:   51 KREQETHEFVAYFQKEIQTRDKQLTKLGEELAAARLSHALALEQMQQARDADRQHLMQQTTAKEEAASEQIFYLREELHQLELFREMKDSVATKLKDLETQLTLEREQSRETTGALERKFLEEKARLQKEHEKKIEVVKQQAKEDARNGLDADTRKIVTDNKRMGEELRFQLQMTEELQREKQQFEARAKTLNMELQXXVQKEAEFAKQAQRHAREI 267          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A3F2RGU6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RGU6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.510e-28
Identity = 81/217 (37.33%), Postives = 129/217 (59.45%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEV 666
            K E +THEFVAYFQKE++T+D  ++KL +EL        + ++ MQ+    E     +Q T KE+  T QI  L  +L  L  FRE++DS    ++D+   +  + +        LERK L +K  LQK+ E+ IE V++QAK +A + L  +T++IV +NKR+ +ELRFQ+QMT ELQ   +  E +      ++ +  +K+ E+A+Q Q +S+E+
Sbjct:  387 KREQETHEFVAYFQKEIQTRDKQLTKLGEELAAARLSHALALEQMQQARDTERQHFIQQATAKEETSTEQIFYLREELHQLELFREMKDSVATKLKDLETQLTLEREQARDTAGALERKFLEEKARLQKEHEKKIELVKQQAKEDARNGLDADTRKIVTDNKRMGEELRFQLQMTEELQREKQQFEARAKTLNVELQLQVQKEAEFAKQAQRQSREL 603          
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Match: A0A8J5MGW1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MGW1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 8.670e-28
Identity = 79/217 (36.41%), Postives = 130/217 (59.91%), Query Frame = 1
Query:   16 KSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHMQEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAMEDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIEAHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARDVAILNEKDEEYARQGQAKSKEV 666
            K E +THEFVAYFQKE++T+D  ++KL +EL        + ++ MQ+    E   + +Q   KE+  + QI  L  +L  L  FRE++DS    M+D+   +  + +        LERK L +K  LQK+ E+ IE V++QAK +A + L  +T++IV +NKR+ +ELRFQ+QMT ELQ   +  E +    + ++ +  +K+ E+A+Q Q +++E+
Sbjct:  659 KREQETHEFVAYFQKEIQTRDKQLTKLTEELAAARLNHALALEQMQQARDAERQHLIQQAAAKEEAASEQIFYLREELHQLELFREMKDSIATKMKDLETQLTLEREQARDTSGALERKFLEEKARLQKEHEKKIEIVKQQAKEDARNGLDADTRKIVTDNKRMGEELRFQLQMTEELQREKQQFETRAKTLSVELQLQVQKEAEFAKQAQRQAREL 875          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11920.1648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRG7_ECTSI6.400e-10179.82Sideroflexin 2 n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S2UZS8_9STRA1.640e-3538.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y4I6_AURAN2.620e-3236.57Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A067C952_SAPPC7.240e-3137.16Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZQC9_9STRA8.600e-2935.32Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A662WS35_9STRA8.650e-2937.33Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662X256_9STRA1.680e-2839.45Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3HBU3_PHYRM2.580e-2835.94Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3F2RGU6_9STRA4.510e-2837.33Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A8J5MGW1_9STRA8.670e-2836.41Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11920contigL-elsbetiae_contig11920:994..5372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.8
Seed ortholog evalue4.1e-84
Seed eggNOG ortholog2880.D8LRG7
Preferred nameCCDC176
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005815,GO:0005856,GO:0005929,GO:0006996,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0036064,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0060271,GO:0070925,GO:0071840,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.motile cilium assembly
EggNOG OGs28J0W@1,2QRCW@2759
Ec32 ortholog descriptionsideroflexin 2
Ec32 orthologEc-18_004470.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size675
Cds size675
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11920.1648.1prot_L-elsbetiae_contig11920.1648.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11920 994..5372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815393.4153755-CDS-L-elsbetiae_contig11920:993..11341622815393.4153755-CDS-L-elsbetiae_contig11920:993..1134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 994..1134 -
1691682876.231879-CDS-L-elsbetiae_contig11920:993..11341691682876.231879-CDS-L-elsbetiae_contig11920:993..1134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 994..1134 -
1622815393.4270582-CDS-L-elsbetiae_contig11920:1960..20921622815393.4270582-CDS-L-elsbetiae_contig11920:1960..2092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 1961..2092 -
1691682876.2431476-CDS-L-elsbetiae_contig11920:1960..20921691682876.2431476-CDS-L-elsbetiae_contig11920:1960..2092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 1961..2092 -
1622815393.4363523-CDS-L-elsbetiae_contig11920:3468..36071622815393.4363523-CDS-L-elsbetiae_contig11920:3468..3607Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 3469..3607 -
1691682876.252997-CDS-L-elsbetiae_contig11920:3468..36071691682876.252997-CDS-L-elsbetiae_contig11920:3468..3607Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 3469..3607 -
1622815393.4457045-CDS-L-elsbetiae_contig11920:3967..40381622815393.4457045-CDS-L-elsbetiae_contig11920:3967..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 3968..4038 -
1691682876.2709796-CDS-L-elsbetiae_contig11920:3967..40381691682876.2709796-CDS-L-elsbetiae_contig11920:3967..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 3968..4038 -
1622815393.454995-CDS-L-elsbetiae_contig11920:4640..47121622815393.454995-CDS-L-elsbetiae_contig11920:4640..4712Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 4641..4712 -
1691682876.2795682-CDS-L-elsbetiae_contig11920:4640..47121691682876.2795682-CDS-L-elsbetiae_contig11920:4640..4712Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 4641..4712 -
1622815393.466207-CDS-L-elsbetiae_contig11920:5252..53721622815393.466207-CDS-L-elsbetiae_contig11920:5252..5372Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 5253..5372 -
1691682876.2877765-CDS-L-elsbetiae_contig11920:5252..53721691682876.2877765-CDS-L-elsbetiae_contig11920:5252..5372Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11920 5253..5372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11920.1648.1

>prot_L-elsbetiae_contig11920.1648.1 ID=prot_L-elsbetiae_contig11920.1648.1|Name=mRNA_L-elsbetiae_contig11920.1648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
QNTIFKSENDTHEFVAYFQKEMETKDGIISKLNDELIRKESEMRVTVKHM
QEKAQRELAEVTEQMTDKEKVLTNQIKNLEGDLSALARFRELRDSHNKAM
EDMAAAVEAKEQAHAQEMIDLERKLLTDKGNLQKDLERVIEDVRRQAKIE
AHSSLGGETKRIVGENKRLAKELRFQMQMTTELQAHSKGLEEQTTKSARD
VAILNEKDEEYARQGQAKSKEVRT*
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mRNA from alignment at L-elsbetiae_contig11920:994..5372-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11920.1648.1 ID=mRNA_L-elsbetiae_contig11920.1648.1|Name=mRNA_L-elsbetiae_contig11920.1648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4379bp|location=Sequence derived from alignment at L-elsbetiae_contig11920:994..5372- (Laminarionema elsbetiae ELsaHSoW15)
CAGAATACAATCTTCAAGTCGGAGAACGACACCCACGAGTTTGTGGCCTA CTTCCAGAAAGAAATGGAAACTAAGGACGGCATTATTTCCAAGCTGAACG ACGAGCTCATACGAAAGGAGGTACGAAAAAAAAAACGCCCAGCAGAGCAA ATAATGCTGGGTACCATATGCACTTCGCTCGCTTGCGCTTTTTCGGGCAG GGGGCGGGATCGATGCGATTCGGGAGGCGATTGCGAACGGCTGCAAAGAG GCAGAGTATATCCGTCCCGAGGGGCAGTTGCATGGGGGCGCAAAGACTGC TGCTGGTTGCTGTATAGATACACATGTATGTATGTGTAGTAAGAGCTACC CAGGGATTTCGGATTTTGTCAGCGGTGTGGATCGTGTGCGCCAAAAATGT GTTTTTCACTCAGAAAGTTGTCGTCGCGTACCCCGGGCACAAAAGGTTGG TTGTCCGACGCAGCCGTTGTCCAGGCACAAAGTAGTTACTGCAAGAGAAC AATTTTCACCCCACGGCGGCTGTTGTGGTAAAAAATATTTCAGTCGCTCG CAGCGCGATTCCACCTCTCTAAGCTTGGCTGTAGCGAAGAACTTATCCAG CCATCTCTACGTCTGTCTGAAATCGCCCGCCATTTACCTCGTGCCCTCTT CTTGCGCCAGTCAGAGATGCGTGTGACGGTGAAACACATGCAGGAGAAGG CGCAGCGCGAGCTAGCGGAAGTGACAGAGCAGGTCGGTCTAGCAAGACCT GGCGCCTGATGAATGACAACGCACAGCCGGCGTCGTCGTCCGTGATCGTA TTGCTCTGTGCGCGCGTGATGCCGTAAGCAGCAAACACTGCTGTCGTCGC GTCCAAAGCTGTTCGTGATAGTGCTGAATGTTGGGCGATGTTGTTCTCTT GCTTCACAAGCTCTGAACAATCTTTTGAATCTAGTCTACTTTTTTACGAC TGACAGTCGGCAATCTATGGACACAATAATAACCTCCCCTTCTCATCGCC TCCGGCTGTAACTGTACAAATTTTATACAAATCGCGTAGATACTGCATGT ATTAACGAAGTACTAGACTAGCTGTTTGTTTATTTGGGGGTGTGCTATTT AACGTGTGGGACATGATACCTTGCCTATGTCGAAAATAGTGAATGGAGAA TAATATTTCATTTTTGGTAGATAGTTCGACGCGGCAGTACAGCAAACTAG GTTGCCTTTCTTTGGGAGCTAAGAAGTCATGGAAGAGGCACGCACACGTT TCCGAGGCATCCAGAGTGGGCGGACCATTAACCCCCTCCATCTTCCTCCC CCTCTCACCATCCCTTGCACGGTTCTTGGTGCAGATGACCGACAAGGAAA AGGTTTTGACCAACCAGATTAAGAACCTCGAGGGAGACTTGTCTGCGTTG GCCAGGTGAAAATGAGATACGATCGACGGTGTACCCTCACCTGTCTTATA CACAGAAGCACCACAAGCATGCCCACACGTCCTCCGGAAGCGTTGGTCTA TTAAAAGTCAACCGCGCGGTTTTCGAATCGATGTATGCATGCAGTGGAGA GCAAACCTGTCATTTCACGCTGAGGGCTTTCAGTATTCTCAGAGTACGTG GAAGCCTCTCAGGGCTTCTTCAGCCGTTCACAGTAAGCGGTGACGATGTG TTGAGGCCTGGATCTATCGATCGATCGGTTAGTGGATGGGCTGATTGATG CCCGTACCCCCGTGCCTGCCAAACGTAACGTACGCCAACACGCGAACCAA AACAACAAATCGAAGGTTTCGCGAGTTGAGGGACTCGCACAATAAAGCCA TGGAGGACATGGCGGCGGCAGTAGAGGCTAAGGAGCAGGCGCACGCGCAG GAGATGATTGATCTCGAGAGGAAGCTCCTTACGGACAAAGGAAACCTGCA GAAGGTGACTACCGCAATCGGCTGAGTTTTCCTCCCAGCATAATTGATCC CCCCCCCCATCACCTTTTCGAGCAAACACTGTCATTTATTTAATTTCCCC CCGGGAGGGGGGAGGGAGGTTCAGAAAAAAAGCACCCTCCCCCCTGTCTT AAATCTCCCCCTGGGGTTGTATTTTTTCCGTCACCTCCCCCCCGCCCGGG GTTGGAGGTATTTTTCGGCTTGAGCGACACTCAACGCGTCCTAGAGTATT TTTGGGCGGTGGAATACGCCTCGGAATACGTGAAGTCTTCTGTTTTCGGC AGTGAGTGCCGGTGTGTTCAAGCCGCATCTACATTTTATCGCCTGCGTCA AAGTCATGCCCACCAACACGGAAGACCACCGTGAGGCTCTGAGATAATCA GGATATGTCCTCTTTCATTTCCTTCGGCCCTCCCGCCACCTGCAAAAACA CTGCGTACATCCCGCACGCCGTCGCCAAAAAGGGCTGAGCAGCCCCACGT GCTGTTCTCCTCACTTTTTCTCTGTTGAACGCTTGCTCATAGACTTTGTC CATTGTAAGAAGAAGCAGTGTGTGTGGTGTGTGTTTGTGTATACAGTGAC GTGCGTTGTTTTTTGCCCCCCCCCCCCCCTCTCCCGGGTAGATTTCCCCC CGGGGTGTTACTTTCAAAACTAGAACACCTCCCCCCCCTGTCTCGAATTT TCCCCCGAGGGGGTACAGTTTCACAAAAAAAAAACTCCCCGAGGGTAAAA CTCAGCCGATTGCGGTAAAAAACAATGGCACATAACTGAATAGGTCACCG GTGAATCCCCTAAATCGCTAAAAAACTCTGCATGCAGCGCGTTTCCCGAC GAGTGTTTGTTTGGGGCAAGTGTTTCATGGTGGCACTTCTTTCGAGCTGT ATGAGGAGATGGCCCAGGCTGGAAATAGGATGAAACTGCAGCCAGCATGA TTTTTCCGGGGGCTTCAAATCAGAGGCTTGTAAGGCTTTCAACTCTGCCC AACCAGCGCTCGTTATGACGGGTACCTTAGTGCAGTGGCTTTGCGCTGCT CCGGATACGGGAACCTGCGGCACGTTGGCTGCCCATCTATAGTTGGTTTC CTGTTGGCAGGTCGATCCGACGACAACATGCCGCAACACACACACGGAAC CATGCGGGACAATCCTAACCTCCCCTTGTGGCGATGGGGGTCGGCATTCT AACAGCAAAACAAGCACCGGCTTTGGCACGCACCGGGATGCAGACGGAGT ATCTCTTCCGCTTTGTTTCGCACATCGATGCTCTCTCATGCAAGGTAAGC TTTTAATCGGCAGCCTTTAACTGTCAAGCTCACGAGTACACATCCCCGCC TCGTCCCGGCTATCTCACCGGGCGCTGCAGGACCTAGAGCGCGTGATTGA GGACGTCAGGCGACAGGCGAAAATCGAGGCGCACAGCAGCCTAGGGGGGG AGACGAAGCGGATTGTCGGAGAGAACAAGCGCTTGGCCAAGGAACTTCGG TTTCAGATGCAGGTGTTGCAGCACGGCACACCCGTACCCTTCTTGGAATG CTAGTAAAGCCGAGAGGCTCAAGCTCAAGCTATTTCACGAATGTTTGTTT CGTTGCCCCCTCGCGCACTTCCACAAACGTGCACGTGAAACCACTCGATG GGAGTAGCCATAGCCAGCGGTTGCTCTTGGTGCTCGCCGGCTGTCACCTA AAGGGGGTATATCATGTTGTTGTGGTAGTCATCAAGCTTGGGCTGTTGCA AGAGGGACGGATTTTTGTCGGTGGCCTTGCCGAAAAGCGTTTGAGAAGGA GCGCTCTTCGCGGCAGCGGCTGGCCTTTGGACTCCGCTCCTTGTCTGCAT TGGCTCTCGGAGGAGGGCGGTAAACCCTGCGGGTGTTCATTCCTGCTCAG GCTTTGTCGCAGCCATGGCCCGAGAAAAAGCAGGCGATGGCGGTGCCACA GACACGCGTTCTCTCTGACCTTCACGTTTTCCCCCGAGGGTCACCATGGG AAGTGAAAATACACCGGTCGAACGGAAGGCTCATTCATTTTATTTTCCCG CCCATCATTGGCCTATTTGTCGTCTGCCCCACTGCCCCCCTTCCTCCACT ACAGCTAGCTAGACGACCCAACCGGGGTCACATAGGAGGGGGGGTTGGAC CCCCTCCTGCGGTGCCTGCCTTAGATGTTTTTATCGCGAGCAGGGTTCAG CACTCCCCACCCTCTTCAACAATGAAGTCAAAGTAATTAAACTCCCGTTG TTTCCGCACCCTGCCCGCTCGCGAATGCACCCAATGCACCTACCTCGTGT CCGGCCGGCTCTCACGTACGTACGGTACGGTATGGCAGATGACAACCGAG CTTCAGGCGCACAGCAAGGGTTTGGAGGAGCAGACTACCAAGAGTGCGAG GGACGTGGCTATCCTCAACGAGAAGGATGAAGAGTATGCCAGGCAGGGCC AAGCCAAAAGCAAGGAGGTGCGCACATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11920:994..5372-

>mRNA_L-elsbetiae_contig11920.1648.1 ID=mRNA_L-elsbetiae_contig11920.1648.1|Name=mRNA_L-elsbetiae_contig11920.1648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig11920:994..5372- (Laminarionema elsbetiae ELsaHSoW15)
CAGAATACAATCTTCAAGTCGGAGAACGACACCCACGAGTTTGTGGCCTA
CTTCCAGAAAGAAATGGAAACTAAGGACGGCATTATTTCCAAGCTGAACG
ACGAGCTCATACGAAAGGAGCAGAATACAATCTTCAAGTCGGAGAACGAC
ACCCACGAGTTTGTGGCCTACTTCCAGAAAGAAATGGAAACTAAGGACGG
CATTATTTCCAAGCTGAACGACGAGCTCATACGAAAGGAGTCAGAGATGC
GTGTGACGGTGAAACACATGCAGGAGAAGGCGCAGCGCGAGCTAGCGGAA
GTGACAGAGCAGTCAGAGATGCGTGTGACGGTGAAACACATGCAGGAGAA
GGCGCAGCGCGAGCTAGCGGAAGTGACAGAGCAGATGACCGACAAGGAAA
AGGTTTTGACCAACCAGATTAAGAACCTCGAGGGAGACTTGTCTGCGTTG
GCCAGATGACCGACAAGGAAAAGGTTTTGACCAACCAGATTAAGAACCTC
GAGGGAGACTTGTCTGCGTTGGCCAGGTTTCGCGAGTTGAGGGACTCGCA
CAATAAAGCCATGGAGGACATGGCGGCGGCAGTAGAGGCTAAGGAGCAGG
CGCACGCGCAGGAGATGATTGATCTCGAGAGGAAGCTCCTTACGGACAAA
GGAAACCTGCAGAAGGTTTCGCGAGTTGAGGGACTCGCACAATAAAGCCA
TGGAGGACATGGCGGCGGCAGTAGAGGCTAAGGAGCAGGCGCACGCGCAG
GAGATGATTGATCTCGAGAGGAAGCTCCTTACGGACAAAGGAAACCTGCA
GAAGGACCTAGAGCGCGTGATTGAGGACGTCAGGCGACAGGCGAAAATCG
AGGCGCACAGCAGCCTAGGGGGGGAGACGAAGCGGATTGTCGGAGAGAAC
AAGCGCTTGGCCAAGGAACTTCGGTTTCAGATGCAGGACCTAGAGCGCGT
GATTGAGGACGTCAGGCGACAGGCGAAAATCGAGGCGCACAGCAGCCTAG
GGGGGGAGACGAAGCGGATTGTCGGAGAGAACAAGCGCTTGGCCAAGGAA
CTTCGGTTTCAGATGCAGATGACAACCGAGCTTCAGGCGCACAGCAAGGG
TTTGGAGGAGCAGACTACCAAGAGTGCGAGGGACGTGGCTATCCTCAACG
AGAAGGATGAAGAGTATGCCAGGCAGGGCCAAGCCAAAAGCAAGGAGGTG
CGCACATGAATGACAACCGAGCTTCAGGCGCACAGCAAGGGTTTGGAGGA
GCAGACTACCAAGAGTGCGAGGGACGTGGCTATCCTCAACGAGAAGGATG
AAGAGTATGCCAGGCAGGGCCAAGCCAAAAGCAAGGAGGTGCGCACATGA
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