mRNA_L-elsbetiae_contig1190.1631.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1190.1631.1
Unique NamemRNA_L-elsbetiae_contig1190.1631.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A097IUM6_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM6_9PHAE)

HSP 1 Score: 627 bits (1618), Expect = 1.410e-225
Identity = 324/349 (92.84%), Postives = 338/349 (96.85%), Query Frame = 1 
Query:    1 MSAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            MSA+ARVQMASRLAAP+ASKAVGVS+ARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMA ALDGAD+VVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCP ACFLIISNPVNSTVPIFADVLKANGVYNP+KLMGVTTLDVCRAKTFVAENQGM+VDKVDVTVVGGHAGTTIMPLLSQV+GAKFS EDIK+LTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAG+VLDGLNGV+GVKECAFVESDLTDAPFFASPV+LGKDGVSKVH FS+LSAFEQSLV+ENVPAL+ QA     FVK N
Sbjct:    1 MSAIARVQMASRLAAPIASKAVGVSAARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMATALDGADIVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPNACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVEGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSKVHGFSNLSAFEQSLVDENVPALMKQAXXXXXFVKSN 349
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: D8LQM3_ECTSI (Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 RepID=D8LQM3_ECTSI)

HSP 1 Score: 619 bits (1595), Expect = 4.500e-222
Identity = 314/349 (89.97%), Postives = 339/349 (97.13%), Query Frame = 1 
Query:    1 MSAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            MSAVAR+Q+AS++AAPMASKA+GVSS+R FTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGK+EHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMA ALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIA+QCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNP+KLMGVTTLDVCRA+TF+AENQGM+VDK+DVTV+GGHAGTTIMPLLSQV+GAKFS EDIK+LTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAG+VLDGLNGV+GV ECAFVESDLT+APFFASP TLGKDGVSKVH F +LS+FEQ+LV++NVPALV  AQKG DFVK+N
Sbjct:    1 MSAVARIQLASKVAAPMASKALGVSSSRFFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKVEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMATALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAQTFIAENQGMDVDKLDVTVIGGHAGTTIMPLLSQVEGAKFSDEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVEGVTECAFVESDLTEAPFFASPCTLGKDGVSKVHGFGNLSSFEQALVDDNVPALVKMAQKGSDFVKNN 349
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A097IUN2_SACJA (Malate dehydrogenase n=3 Tax=Laminariales TaxID=2886 RepID=A0A097IUN2_SACJA)

HSP 1 Score: 584 bits (1505), Expect = 2.290e-208
Identity = 298/349 (85.39%), Postives = 326/349 (93.41%), Query Frame = 1 
Query:    1 MSAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            MSA+ARVQ  ++LAAPMASKA+GVSS+R+FTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHC++K KVTGHKGAEEM AALDG+D+VVIPAGVPRKPGMTRDDLFNTNASIVKGIA+Q SKSCP AC LIISNPVNSTVPIFADVLKANGVYNP+KLMGVTTLDV RAKTFVAE+QGM+V K+ V V+GGHAGTTIMPLLSQVKGAKF+ EDI +LTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNG K VKEC FV+ DLTDAPFFASP TLG DGVSK+H FS+L+ FEQSLV+ENVP+L++ A+KG DFVK+N
Sbjct:    1 MSAIARVQPLAKLAAPMASKALGVSSSRAFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCDAKAKVTGHKGAEEMGAALDGSDIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQVSKSCPNACILIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVVRAKTFVAEHQGMDVSKIKVDVIGGHAGTTIMPLLSQVKGAKFTEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGKKNVKECTFVDCDLTDAPFFASPCTLGTDGVSKIHGFSNLTPFEQSLVDENVPSLISMAKKGSDFVKNN 349
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A097IUM5_9PHAE (Malate dehydrogenase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUM5_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 1.710e-203
Identity = 292/349 (83.67%), Postives = 318/349 (91.12%), Query Frame = 1 
Query:    1 MSAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            MSAVAR     R+AAP ASKA+GVS+ARSFTGTARAQNKV VVGAAGGIGQ MSLLLKLSGKI HLSLFDIVNTPGVAADISHCNS+GKVTGHKGAEEM  ALDGAD+VVIPAGVPRKPGMTRDDLFNTNASIVKGIA+QCSKSCP ACFLIISNPVNSTVPIF DVLKANGV+NP KLMGVT+LDV RAKTFVAE+QG++V K+ V V+GGHAGTTI+PLLS+VKGA F+ EDIK+LTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVK VKEC FVE DLTDAPFFASP TLGKDGVSK+H FS L+ FEQ+LV++NVP L+  A+KG +FVK+N
Sbjct:    1 MSAVARASPLVRMAAPTASKAIGVSAARSFTGTARAQNKVAVVGAAGGIGQSMSLLLKLSGKIGHLSLFDIVNTPGVAADISHCNSEGKVTGHKGAEEMGTALDGADIVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCSKSCPNACFLIISNPVNSTVPIFGDVLKANGVFNPAKLMGVTSLDVVRAKTFVAEHQGLDVSKMKVDVIGGHAGTTIIPLLSKVKGADFTEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKNVKECTFVECDLTDAPFFASPCTLGKDGVSKIHGFSKLTPFEQALVDDNVPTLINMAKKGSEFVKNN 349
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A097IUQ0_9PHAE (Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 RepID=A0A097IUQ0_9PHAE)

HSP 1 Score: 567 bits (1462), Expect = 8.070e-202
Identity = 286/349 (81.95%), Postives = 320/349 (91.69%), Query Frame = 1 
Query:    1 MSAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            MS V R +  +++AAPM S+AVG+SS R+F+GT R QNKVTVVGAAGGIGQPMSLL+KLSGKI+HLSLFDIVNTPGVAADI HCNSKGKV G+KGAEEMAA+LDG+DVVVIPAGVPRKPGMTRDDLFNTNASIVKGIA+QC+KSCPKACFLIISNPVNSTVPIFA+VLKA+GVY+P KLMGVTTLDV RAKTFVAENQGM+VDKV+V V+GGHAGTTIMPLLSQVKGA F+ EDIK+LTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VLDGLNGVKG+KEC FVES LT APFFASP TLG +GVS++H +  LS FEQ+LV+ENVPALV  +QKG DFVK+N
Sbjct:    1 MSVVTRTRPLAKMAAPMVSRAVGISSVRAFSGTPRVQNKVTVVGAAGGIGQPMSLLMKLSGKIDHLSLFDIVNTPGVAADIGHCNSKGKVMGYKGAEEMAASLDGSDVVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQVKGANFTEEDIKTLTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQALVDENVPALVKMSQKGIDFVKNN 349
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A097IUP2_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUP2_9PHAE)

HSP 1 Score: 560 bits (1443), Expect = 6.540e-199
Identity = 282/345 (81.74%), Postives = 312/345 (90.43%), Query Frame = 1 
Query:   13 ARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            AR+Q  +R+ AP+A KA+GVS+ RSFT +ARA+NKV VVGAAGGIGQPMSLL+KLSGKIEHLSLFDIVNTPGVAAD+SHCN+KGKV+ HKG EEM AALDG D+VVIPAGVPRKPGMTRDDLFNTNASIVKGIA+QC+KSCP ACFLIISNPVNSTVPIF DVLK  GV++P+KLMGVT LD+CRA TFVAENQGM+VDKV V V+GGHAGTTIMPLLSQVKGAKFS EDIK+LTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA RVLDGLNG  GVKEC FVES LTDAP+FASP TLGK+GVS+VH F  LS FEQSLV+ENVPAL+  A+KG DFVK+N
Sbjct:    6 ARIQPVARMVAPVALKALGVSATRSFTASARAKNKVAVVGAAGGIGQPMSLLMKLSGKIEHLSLFDIVNTPGVAADLSHCNTKGKVSAHKGPEEMGAALDGCDLVVIPAGVPRKPGMTRDDLFNTNASIVKGIAEQCAKSCPNACFLIISNPVNSTVPIFGDVLKTAGVFDPRKLMGVTMLDICRANTFVAENQGMDVDKVSVDVIGGHAGTTIMPLLSQVKGAKFSEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAERVLDGLNGATGVKECTFVESSLTDAPYFASPCTLGKEGVSEVHGFGTLSPFEQSLVDENVPALIKMAKKGTDFVKNN 350
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A097IUI7_9PHAE (Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUI7_9PHAE)

HSP 1 Score: 547 bits (1409), Expect = 1.050e-193
Identity = 275/348 (79.02%), Postives = 313/348 (89.94%), Query Frame = 1 
Query:    4 SAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN 1047
            S  +RV   +R+AAP ASKAVG+S++R+FT +  AQNKV VVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADI HCN+ GKVT H G EEM+ ALDG D+VVIPAGVPRKPGM+RDDLFNTNASIVKGIA+QC+KSCPKACFLIISNPVNSTVPIFADVLK+ GV++P KLMGVTTLDVCRAKTFVAENQGM+VDKV+V V+GGHAGTTIMPLLSQ+ GAKFS EDIK+LTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFAGRVLDGL+G   +KEC FVE D+TDAPFFASP TLGK+GVS++H F +LS+FEQ+LV++NV +L   A+KG DFVK++
Sbjct:    4 SIASRVSSITRMAAPTASKAVGISASRTFTSSTTAQNKVAVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADIGHCNTHGKVTSHTGPEEMSTALDGCDIVVIPAGVPRKPGMSRDDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFADVLKSAGVFHPGKLMGVTTLDVCRAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQIPGAKFSDEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAGRVLDGLDGQADIKECTFVECDITDAPFFASPCTLGKEGVSEIHGFKNLSSFEQALVDDNVDSLKKMAKKGSDFVKNS 351
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A835YGB7_9STRA (Malate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB7_9STRA)

HSP 1 Score: 491 bits (1264), Expect = 1.010e-171
Identity = 247/335 (73.73%), Postives = 292/335 (87.16%), Query Frame = 1 
Query:   34 RLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFV 1038
            R+A+P+A++A+G+ +ARSF+ +  AQ KVTVVGAAGGIGQP+SLLLKLSGK++HLSL+D+V TPGVAAD+SHCN+ GKVTGHKGA E+ AAL  ADVVVIPAGVPRKPGMTRDDLFNTNA IVKGIA+ C+++CPKA FLIISNPVNSTVPIFA+VLK  GVY+ KKLMGVTTLDVCRA+TFVAEN G +V+   V V+GGHAGTTI+PLLSQV+GAKFS +D+++LTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA RVL  + G   ++EC FVE+DLT AP+FA+PV LGKDGV KV  F  LSAFEQ +++ENVPAL  QA+KG DFV
Sbjct:   10 RVASPLATRALGLEAARSFSSSRSAQAKVTVVGAAGGIGQPLSLLLKLSGKVDHLSLYDLVGTPGVAADLSHCNTNGKVTGHKGASELKAALQDADVVVIPAGVPRKPGMTRDDLFNTNAGIVKGIAEACAEACPKARFLIISNPVNSTVPIFAEVLKGRGVYDKKKLMGVTTLDVCRAQTFVAENLGQSVNDTAVDVIGGHAGTTILPLLSQVEGAKFSDKDLEALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAIRVLAAMEGEADIRECTFVENDLTAAPYFATPVILGKDGVEKVLGFGKLSAFEQKILDENVPALQAQAKKGVDFV 344
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: F0YJC9_AURAN (Malate dehydrogenase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC9_AURAN)

HSP 1 Score: 422 bits (1086), Expect = 7.410e-145
Identity = 211/313 (67.41%), Postives = 253/313 (80.83%), Query Frame = 1 
Query:  100 ARAQNKVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFV 1038
            AR  + V V+GAAGGIGQPMSLL+K S  +  LSL+D+VNTPGVAAD+SHC++   V    G    A AL+G DVVVIPAGVPRKPGMTRDDLFNTNASIV+ +A+ C+ +CP ACFLII+NPVNSTVPIFA+ LK +GVY+  KL GVTTLDV RAKTFVAENQG +V   DV V+GGHAGTTI+PLLSQ++GA FS +DI  LTHRI FGGDEVVQAKDGAGSATLSMA+AGA+F  +VL+ LNG  G+ ECAFVESD+TDAP+F+SPVTLGK+GV  +H +  LS FEQ ++++ VP L+ QA+KG  FV
Sbjct:   15 ARYASNVAVLGAAGGIGQPMSLLIKQSPLVNELSLYDVVNTPGVAADLSHCSTPATVRSTVGMGNAAEALEGMDVVVIPAGVPRKPGMTRDDLFNTNASIVQSLAEACATTCPNACFLIIANPVNSTVPIFAETLKKHGVYDKNKLFGVTTLDVVRAKTFVAENQGGDVLNTDVDVIGGHAGTTILPLLSQIEGASFSQDDIDKLTHRIMFGGDEVVQAKDGAGSATLSMAYAGAHFTFKVLEALNGATGITECAFVESDVTDAPYFSSPVTLGKNGVETIHGYGTLSPFEQDVLDKAVPDLIAQAEKGVKFV 327
[Close]
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Match: A0A7S0L929_9EUKA (Malate dehydrogenase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L929_9EUKA)

HSP 1 Score: 419 bits (1078), Expect = 7.170e-144
Identity = 211/310 (68.06%), Postives = 256/310 (82.58%), Query Frame = 1 
Query:  115 KVTVVGAAGGIGQPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMAAALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGMNVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFFASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKD 1044
            KV V+GA+GGIGQP++LLLKL  ++  LSLFD+V TPGVAADISHC +  KVTGH G EE+  AL+G  VVVIPAGVPRKPGMTRDDLFNTNASIV+G+A+ C+KSCP A FLIISNPVNSTVPIFA+ LK +GVYNP+KL GVTTLDV RA TFV+ENQGM+V+  +V V+GGHAGTTI+PLLSQV GAKFS E++++LTHRIQFGGDEVV+AKDGAGSATLSMA+AG  F  R+L  ++G   V EC+FVE++LT APFF++PV LG +GV +V  +  LS  EQ+ ++  VP LV QA+KG DFVK+
Sbjct:   10 KVAVMGASGGIGQPLALLLKLDNRVTELSLFDVVRTPGVAADISHCCTPAKVTGHVGMEEVGNALNGCKVVVIPAGVPRKPGMTRDDLFNTNASIVQGLAEACAKSCPDAMFLIISNPVNSTVPIFAETLKKHGVYNPRKLFGVTTLDVVRANTFVSENQGMDVNNTNVRVIGGHAGTTILPLLSQVPGAKFSEENVQNLTHRIQFGGDEVVKAKDGAGSATLSMAYAGQQFTSRLLAAISGEANVVECSFVENNLTAAPFFSTPVRLGPNGVEEVLHYGTLSKAEQATLDAMVPDLVAQAKKGVDFVKN 319
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1190.1631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUM6_9PHAE1.410e-22592.84Malate dehydrogenase n=1 Tax=Punctaria latifolia T... [more]
D8LQM3_ECTSI4.500e-22289.97Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 ... [more]
A0A097IUN2_SACJA2.290e-20885.39Malate dehydrogenase n=3 Tax=Laminariales TaxID=28... [more]
A0A097IUM5_9PHAE1.710e-20383.67Malate dehydrogenase n=1 Tax=Desmarestia viridis T... [more]
A0A097IUQ0_9PHAE8.070e-20281.95Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 ... [more]
A0A097IUP2_9PHAE6.540e-19981.74Malate dehydrogenase n=1 Tax=Dictyopteris undulata... [more]
A0A097IUI7_9PHAE1.050e-19379.02Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID... [more]
A0A835YGB7_9STRA1.010e-17173.73Malate dehydrogenase n=1 Tax=Tribonema minus TaxID... [more]
F0YJC9_AURAN7.410e-14567.41Malate dehydrogenase n=1 Tax=Aureococcus anophagef... [more]
A0A7S0L929_9EUKA7.170e-14468.06Malate dehydrogenase (Fragment) n=1 Tax=Coccolithu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1190contigL-elsbetiae_contig1190:7355..14832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score619.4
Seed ortholog evalue1e-174
Seed eggNOG ortholog2880.D8LQM3
Preferred nameMDH2
KEGG rclassRC00031
KEGG koko:K00026,ko:K03283
KEGG TC1.A.33.1
KEGG ReactionR00342,R07136
KEGG Pathwayko00020,ko00270,ko00620,ko00630,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map00020,map00270,map00620,map00630,map00710,map01100,map01110,map01120,map01130,map01200,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00009,M00011,M00012,M00168,M00171,M00353,M00355
Hectar predicted targeting categorymitochondrion
GOsGO:0002165,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006091,GO:0006094,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006919,GO:0007275,GO:0007431,GO:0007435,GO:0007552,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009060,GO:0009117,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009893,GO:0009987,GO:0010604,GO:0010623,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0015980,GO:0016020,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019222,GO:0019318,GO:0019319,GO:0019362,GO:0019538,GO:0019637,GO:0019674,GO:0019752,GO:0022612,GO:0030060,GO:0030154,GO:0030162,GO:0031323,GO:0031325,GO:0031974,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0034641,GO:0035069,GO:0035070,GO:0035071,GO:0035096,GO:0035209,GO:0035272,GO:0036211,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043280,GO:0043281,GO:0043412,GO:0043436,GO:0043543,GO:0043621,GO:0043648,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0045862,GO:0046364,GO:0046483,GO:0046496,GO:0046554,GO:0046983,GO:0048102,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048707,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051087,GO:0051171,GO:0051173,GO:0051186,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060033,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0072350,GO:0072524,GO:0080090,GO:1901360,GO:1901564,GO:1901576,GO:2000116,GO:2001056
EggNOG free text desc.L-malate dehydrogenase activity
EggNOG OGsCOG0039@1,KOG1494@2759
EC1.1.1.37
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Ec32 ortholog descriptionmalate dehydrogenase
Ec32 orthologEc-10_006200.1
Exons9
Model size1128
Cds size1050
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1190.1631.1prot_L-elsbetiae_contig1190.1631.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1190 7433..14832 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815391.574684-UTR-L-elsbetiae_contig1190:7354..74321622815391.574684-UTR-L-elsbetiae_contig1190:7354..7432Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1190 7355..7432 -
1691682875.3172207-UTR-L-elsbetiae_contig1190:7354..74321691682875.3172207-UTR-L-elsbetiae_contig1190:7354..7432Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1190 7355..7432 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815391.584673-CDS-L-elsbetiae_contig1190:7432..75731622815391.584673-CDS-L-elsbetiae_contig1190:7432..7573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 7433..7573 -
1691682875.3299997-CDS-L-elsbetiae_contig1190:7432..75731691682875.3299997-CDS-L-elsbetiae_contig1190:7432..7573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 7433..7573 -
1622815391.6912608-CDS-L-elsbetiae_contig1190:8819..89391622815391.6912608-CDS-L-elsbetiae_contig1190:8819..8939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 8820..8939 -
1691682875.3401034-CDS-L-elsbetiae_contig1190:8819..89391691682875.3401034-CDS-L-elsbetiae_contig1190:8819..8939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 8820..8939 -
1622815391.7069147-CDS-L-elsbetiae_contig1190:9521..96381622815391.7069147-CDS-L-elsbetiae_contig1190:9521..9638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 9522..9638 -
1691682875.3493476-CDS-L-elsbetiae_contig1190:9521..96381691682875.3493476-CDS-L-elsbetiae_contig1190:9521..9638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 9522..9638 -
1622815391.7220306-CDS-L-elsbetiae_contig1190:10361..104381622815391.7220306-CDS-L-elsbetiae_contig1190:10361..10438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 10362..10438 -
1691682875.3591814-CDS-L-elsbetiae_contig1190:10361..104381691682875.3591814-CDS-L-elsbetiae_contig1190:10361..10438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 10362..10438 -
1622815391.7351909-CDS-L-elsbetiae_contig1190:11423..115111622815391.7351909-CDS-L-elsbetiae_contig1190:11423..11511Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 11424..11511 -
1691682875.3686695-CDS-L-elsbetiae_contig1190:11423..115111691682875.3686695-CDS-L-elsbetiae_contig1190:11423..11511Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 11424..11511 -
1622815391.7457302-CDS-L-elsbetiae_contig1190:12526..126651622815391.7457302-CDS-L-elsbetiae_contig1190:12526..12665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 12527..12665 -
1691682875.3798294-CDS-L-elsbetiae_contig1190:12526..126651691682875.3798294-CDS-L-elsbetiae_contig1190:12526..12665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 12527..12665 -
1622815391.755402-CDS-L-elsbetiae_contig1190:13630..137311622815391.755402-CDS-L-elsbetiae_contig1190:13630..13731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 13631..13731 -
1691682875.3891456-CDS-L-elsbetiae_contig1190:13630..137311691682875.3891456-CDS-L-elsbetiae_contig1190:13630..13731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 13631..13731 -
1622815391.7673779-CDS-L-elsbetiae_contig1190:14259..144091622815391.7673779-CDS-L-elsbetiae_contig1190:14259..14409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 14260..14409 -
1691682875.3997095-CDS-L-elsbetiae_contig1190:14259..144091691682875.3997095-CDS-L-elsbetiae_contig1190:14259..14409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 14260..14409 -
1622815391.7788172-CDS-L-elsbetiae_contig1190:14715..148321622815391.7788172-CDS-L-elsbetiae_contig1190:14715..14832Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 14716..14832 -
1691682875.4142482-CDS-L-elsbetiae_contig1190:14715..148321691682875.4142482-CDS-L-elsbetiae_contig1190:14715..14832Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1190 14716..14832 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1190.1631.1

>prot_L-elsbetiae_contig1190.1631.1 ID=prot_L-elsbetiae_contig1190.1631.1|Name=mRNA_L-elsbetiae_contig1190.1631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp
MSAVARVQMASRLAAPMASKAVGVSSARSFTGTARAQNKVTVVGAAGGIG
QPMSLLLKLSGKIEHLSLFDIVNTPGVAADISHCNSKGKVTGHKGAEEMA
AALDGADVVVIPAGVPRKPGMTRDDLFNTNASIVKGIADQCSKSCPKACF
LIISNPVNSTVPIFADVLKANGVYNPKKLMGVTTLDVCRAKTFVAENQGM
NVDKVDVTVVGGHAGTTIMPLLSQVKGAKFSAEDIKSLTHRIQFGGDEVV
QAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKGVKECAFVESDLTDAPFF
ASPVTLGKDGVSKVHAFSDLSAFEQSLVEENVPALVTQAQKGYDFVKDN*
back to top

mRNA from alignment at L-elsbetiae_contig1190:7355..14832-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1190.1631.1 ID=mRNA_L-elsbetiae_contig1190.1631.1|Name=mRNA_L-elsbetiae_contig1190.1631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7478bp|location=Sequence derived from alignment at L-elsbetiae_contig1190:7355..14832- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAGCTGTTGCACGCGTTCAGATGGCGTCGAGATTGGCGGCGCCGAT
GGCGTCGAAGGCCGTCGGCGTGTCTTCGGCTCGTTCCTTCACGGGTACAG
CACGCGCGCAGAACAAGGTGTGCTCTCTCTCTCTCCATGCATATTTACGA
GAGAGTGATGTGGTTTACAAAGACTTGGTCCTTGTTTTCACACACCAGCC
AGCTCTGCAGTACGCTTGCGATGCCGTCTAGCCTTAGATGAATTGAAAAC
CTCCTATCGTACTTGAGACTTTGCACCAAGTTTTTTTTCGAGAGCAACTG
ACTCAAGCTTCTTGGAAAGCACTCCCAGCGAATGTTCTGGACTTTAGCGG
CGCACTTCGACCAACCTTCTGCGGCCCTTTTGCTGTCGCGCGTGTGTTTT
GTTGTGTTACTTCCCTTTGACAGGTAACTGTAGTGGGCGCGGCAGGTGGC
ATCGGTCAGCCCATGTCTCTTCTCCTCAAGCTGTCAGGGAAGATCGAGCA
CCTGTCCTTGTTTGACATCGTCAACACCCCGGGCGTTGCTGCCGACATCT
CCCACTGCAACAGCAAGGGAAAGGTGACTGACAGCATACAAACACACCAA
CATCTCAGCATCGTGTGTCTGATTCAAGTTGCCGTTGACCCATGAAGCCG
CTGCTGTGAAGAGAAAACGGCCTTTGTGCACAGCGATGTAATAGACTTCT
CTGCCATACAGAAGAGGAATATGCAAGGTTCGGTGCATATTTGCTGGTTT
ACCCGCTGAACTGGCTCTTTTTGGGCACACGTGCTGCAGCAATCGCTATT
GGAACGTTGAAGCCGGCCGGCACCACCCCATTGGCCGTTTCATATGCGCA
GCATGACACCACCTGCGGTTGCGGTTTGAACAAAGGTTTTTCCAGCAAAA
ATCACCATCGCCATTACCACAAACTGCAGCGCCCGGGTACGAGTAGTGCA
CAACAGATATGTTTGCTTATAAGCAAGAATATGGAATAATGTTAATTTGC
CGCACACAGAACTGAAACTCCTGCCTGCTGACGCTAATGGTGTAGCTGCT
GTTTGCGGCGCCGTTGTGTATCGTGTCCTGTCCCATCTTTCTCGGTCGCA
GGTGACCGGGCACAAGGGAGCCGAGGAGATGGCCGCGGCGCTGGACGGCG
CGGATGTCGTCGTCATCCCTGCCGGAGTCCCCCGCAAGCCGGGCATGACC
CGGTGAGTTCATGAGATGAACGCCGAGGTAGAAGCAAGCGAAAGCCCTAG
CTACTTCTTCCCGCGGGTAGCTGCTGCGTCTTGAAGCTCGCTGCTTGCGT
GTCTCTGCTGCGGTAATTAGTGGTGCATCAATTTGCGCCTGGATTGGCCT
TTCTGTTTTCTGCGATAAGCGTACAACAGTAGGAGTACAGACAGCAGTAA
GAGGAAGTCGTAGGTGTGCCCGCCATCCTGCGCACGAAAAGGTCACCGCG
TGCCGCGTGAAGCGGCCAAAGCTAGCGCTGTTGCGGCTACGGCTTAAAAA
GGAGAGCACGTCTGGGTTGCAACGCGTGTGGTCGATAGCTCTGTGCGTGC
GTGTGTGTCTACCGGGCGCGCAAAGGCCGGGCGCCGTTTGTGATCAATTT
CGATCGTCCCGGCCTCATGTGGATCCCGTCCCATGCCGCGGCTGGTATCA
TCCACGAGGCAGTCACCCCACGCTAGAAATAGACACATGCTGCCCTCAAC
CCATGCTCCTATGTAAGTGTGGCACGGGCGGTGACCACAGCGATAGTTTG
CGGTTCGCGTAACACCAGGGTTTTCAAGCCAGACATAACACGCTTCGGTG
CACACTCTTACACGAACAGCCAAGCCTCAGGTCCGGGCCGTGTTGTGACG
CCATTGATTTACTTCGACCTTCGCCCCCGGCGAGCTCCTATTCCTTGTTC
GATGTTCCCAATTTACTACATACTCCCCGGCAAGCAGACATCATGATATT
GACGCCGTATTCAAAGGCATCGAAACGTAACATCGGCGTTCTTCTGAGAA
GTTTTTGCCAGCACTATTGAAGCTTATCCAGTCATATCTCTTCCTTCCAA
AGGCTTGTACGCGAAGGATGGTGGGATGGACCGGCAGTAAATATTTGTTG
CCATCAAAATGACCGCGATTTGTCGAATACTTTTCTCTGTCGCTGTTTCG
CTTTTTGTGCCGTTCAGCGACGACCTTTTCAACACGAACGCGTCGATCGT
CAAGGGTATCGCCGACCAGTGCTCCAAGAGCTGTCCCAAGGCATGCTTCC
TCATCATCTCCAACCCGGTCAACTCAACCGTGCCTATCTTCGCGGACGTC
CTCAAGGTCTGCTGACAGTCCCGTTGAATGATCGTCGTCGTCGTTGCTTT
TGTTGTTCACTGCTTCATAGTTTAAGCCGTCCTGACCTCGATATGATAAA
TGGTCGTTTCCCGATCACGAATGTGAAACAACATGAGCATGGATGGACTT
ATGGACATGAAGGGTGCAGAAATCGAATCGGCTTGTTTCCGGAAAGAATG
ACAACGAAGTTATCGACAAGACGAGAGGGCACGAGAGGACACGGCACAGA
CCAGACAAACTTGTTCGAAGCAGCAGCATCGCGTGTAACAACAATGCTCA
TGATGGCAACAAACGTGCTCTTCGCACGAAGACAACGAGTTCTACCGCGC
AGCGGTAGAATCTGTGTTGCGCGGCTATGTTTTTGTGCCCGGCACGAGCA
CGCCCCTCCAAGCGTAATCTTCACAAAACAAATACCACATGCCGTTCGCT
AGAAGTGCGACGAAGATAAGAACGTCTGCACCCGTGAAAGCGTGCGCCGG
GCATGCTTGAATCCAATCGAATCGAGACACCCACCGCACTAGACCAGACC
CCTGTCGTGCAGCGACAGCGACAACGCTCGTCACTCACCGGATGGAACAG
GCCACAGACGAAATCGCGGTAGCTCTTGAGCATTCCTCTCTTTGAATCGC
CTACCACATCTTCCATGGGCCCGGTGGAAGAGTTGCTTGATGCCACGTCG
ACAGCTTCGGCGTTTTTCCCTCCCTGCCTTTCATGCTACATATCTCTGCC
ACCGTGGGATGCCGTTGTTCCACGAACGTATGCGGAGGCTCGCCTGAGGA
AGCTCTAGTGTAGCCTTGACGAAGAGAAACGACCTTACTTTTATAAAAAA
GGTGCACCCTACCTCCGAAGCCTCGGTTACCCGCACTCAGCCTCACTGCG
TCCCTACCGCGATGTCTTGATGCCTTCGCTTGCTACCACGGTACCAGCCC
CCGTCCCTCGCTTGTTGCTTGTTTGGTGACATTGCCGTCATTGCCGCCGC
CGTTGCCGTGGATTCAAACAGGCGAACGGCGTGTACAACCCGAAGAAGCT
GATGGGCGTCACCACCCTTGACGTGTGCCGCGCCAAGACTTTCGTGGCAG
AAAACCAGGGTGAGGATCAGGAGGGTTGTGTGGGGCCAGGGCAAGAGTGA
GGGCAAGGACTCGTACCCGTTTGTCAAGACAGGGAGAGAGATTAAGAGCT
ACTGTATTCAACGAAAAGACAGAGCTGCTCCATTTTGATTCTCGCCGCGA
CACGCATTTCTGGTGTTTAGTGTTGGTGCGGATGCTGGTGTGTTGGATTC
GCGGTTTGTCGTCCCTGACTGCCTCAGATATTTAGTTGGTTTTTGATCAG
CCCTTCCGCTGGTCGTGTTGTCGTTGTCGCTGTCGTGGAATTGTTGTCCC
TCCTGCGTCTACCTGTTGTTTCTCTGCCATCCTGTTTGTCTTGGGCGTTC
TTTGCGTTCTGGCCCGCAACCTTTGATGGAGCATGACAATCTACATCTTG
GGAAATTGGAAAATGCCCTCAAAGTCTTGTGGTTTCGTTTCGTGTTTTGC
GCCCTTCGTAACTGACGTTGTGGGTCATATGTTGATACTTATGTAGTGTA
TGCGTGTGGAAGAAGGTGCGAAACCGTCTGTCACTAGCGCTTGACATCTA
TGCCAGGGACACGTAAAAATTGTCATGATGTTTCGGCATGAAGGCAGGGT
GGCATTCACGCATTTTGGCATCCCTTCGGGGCATGCCTTGAGGGCCACAC
GACTGCCGTCGGCCGTAGCATAACCACATGACCACCTTCCAACTTGGGGC
ATGGTGCATGTTTTGCTCGCTTGCCCCCCAAACTTTTTTTGCCTCGTTAC
CGCTGGTTGTTTCGCGAGCTTGGACCATATTTGTCGTATCCTGTGTACCA
TTGAACTGCGGTATACCACTTCTAATGCCAGCTGTTTGTGACGTCCTGTA
GCCTGTCTGTGCACCTCGCCTTGGATTTTAACACCAACTGGCCCGCGCAA
TGCCTCTCGTTCCTTTCGTTTTTGTGCCTTGCGATGATTCACGGGACACG
TGACGCCATGCGATGTCACGCCATGCAATGTGATGTGATCCCAGGGATGA
ACGTGGACAAGGTAGACGTTACTGTAGTGGGAGGACACGCGGGCACCACC
ATCATGCCTCTTCTTTCTCAGGTGCGATGCTATCAATCTCCGGATTGTTT
TTTTCGTCATCTCTAGCAAGTTTGTACAGTGTAATTCCATAGAGACCTCG
AAGTCGACAACGCTATCCTGCTTGCTGCTCTGCTCCGGATGTGTGGTAAA
CCGAGGGGGTCGCGCTTGTCTTGTCCACTTGGGGGGTTGTTGTTCGTTGC
CGAGGAGAGACTTCCACTGACTGCTGCTAAAGGCTGCTTTGTTGACCCTA
GCTCTAACCCTAGCCTAACCCCAGCCGTAAGCCTATAACCCGAAAAGAGG
AATTGCTTATATGGACCTGTAGAACATATGAGTGCTTGAAGGAATCACAA
GGTGGCGACAGGGCAACATAACAGCATAACAAACGTAGTAATTATATAAC
AGCATCGAGGGGAAACCCGCGTCACTCTCAAGATCAGCGCCGCCCAGTGC
CCTCGGCTAGACTGCTGTGCCCCCACTGCTGGCCCAAAACCTGACGATTA
CCCCTTGCCAAAGCAAAGTAAGTCAAAGGGGGGAGGGCTATCTGTAGCCT
CTTCTCTTATTTCACGGAAGTCATCGGAAGAGTGGTGCCGCAAGCGTGCC
AAGGAAGCAGCTACACTGTGTTGAAAATAGAAAATAACGTAGTCAGCCTC
AAGGCGTTGTTGTAATGATTTTGATTTCCACGTATTTCCACGCGCGCGAC
ATCCAGCTAACAACGATGAATTTTTCATCAATGCTGACACTCAGGTGAAA
GGGGCAAAGTTCTCGGCGGAGGACATCAAATCCCTCACCCACCGCATCCA
GTTCGGAGGAGACGAGGTGGTGCAGGCCAAGGACGGAGCTGGCTCGGCCA
CCCTCTCCATGGTGAGACTGAGACACAGAGAGAGAGAGACTGACGGACAG
ATAGGCAGAGAGAGAGAGACAGACAGACAGATAGGCAGAGAGAGAGAGAC
AGACAGACAGATAGGCACAGAGAGACAGAGAGACACACACACAGCATATA
CACAACCAAATGATATTAAGCAATGGGGGAGGATCACCATCTACAGCACA
GCAGTATCGTCAACAAGAGGGAGGTTGTATGCTGTAGGCGGAGAGAGTGG
TGGAGGGTGATGGACACACACAACGCAAGCGCACATACAAACACGCGTCA
TCAATTAGTAAGTTGAGCTTCGTTCCGGCAATGTGATGCGTACATGAAGA
TAGACCATGTACCTGTATGTTTTGCTTTTTTTTTTGGCATCGTATTCAGC
CCCCCCCCCCCCCCCCCCCCCCCCGCCCTATTCCCCCTCCCTGCGGGCCC
GCGCGCCCCCTTCTGTCGGGGCGGNNNNNNNNNNACGCGTACCTATCCCC
CGCCCCCCCCCCTCTCTGTTTTGCTTTTTTTTTTGGCAACAAATTCATCC
CCCCCCCCCCCCTCTCCCCCTGCGCTATCTACCCATTTGCTAGGCGCACG
CGGGCGCTTATTTCGCGGGCAGGGTCCTCGACGGGCTGAACGGCGTGAAG
GGCGTGAAGGAATGCGCCTTCGTGGAGTCTGACCTCACGGATGCCCCCTT
CTTTGCGTCTCCGGTGAGTCAAGTGACGTCATCGATGACGTCACGTTATT
CATCTGTTGTTTCACGGGTAGAAGTGGTGACATCACGCACGCACGGCTCT
TTTCGAGCACCTTACCTTGTGGCTGTGTTCCGCGATCGAAGCTGAGGATA
TTTTCTTGCGTTTAGTTTTGTGAGGATTCCTCTTTTTGGGCGCTTTGGAG
GGGGGGGGGGGGGGGGGGGGTTTTTGTGGGGTGCGCCCGGGGGGGGCCCC
CTCCCTTCTCTCTCCTCCCCCCGGGGGGTCTTGTTTTTCTTTTGGNNNNN
NNNNNGGGGGGGGGGGGGGGAGTTTGGGTGGTGTGGGTTTGGGGGGAGCC
CTAGTTTTGGGGGGTTTGGGGGGGGGGGGGGGGGGGGGGGCGATTTTGTG
GATTGCGACCCGCGGGTGTCCCATTCCTAGCCTCTCCTTCCCACTGAGTG
TCTGTTGTTTCTGTTGAGCGGTCTCGCCCACGACATAGTTTGCCCCGGCA
GCAGGCCGGTTGTCACGCTACGGGTTTTGTGCAGAGGGCTGGGGTTGGAG
TGGGGGGTTGAGTAGTTCGTGTCGCAAACCGAGACGCTTGGATATCTTTC
TTCTATTGTTTCTTCAAGGAGTATCACTCCGAAGGTACGTACTCATGTAC
CAGTACTTGTTTTCTGTTTTTGGCGTGTGTTCGCATTCGGAACCGTTCCG
ATTTGCATCTGGCACCTTCACATATTTGCGATGCAAACATAGATGCGGTC
GCTTCCCGAGGTCGCAAGGAAATCTGAGTACAGCAACATACCCCGAAAAT
AGTCAAACGCGAACAGTGTACCCTCAAGTCGAGAAAGAGTGGGTGAAAAC
CACGCAACGCAAGGCACAATGCAGATAACTATGCAGTTTCGAGAAGTCTG
AATTATTTCCTTGAAGCCTGAGAGGAAGTATGTCCTTCCAAGCTTGCCTG
AACTTTTGTCCTTTTCCGAGTCGGACATGGTGTCATACGGAAGCTGCTTC
CGTCTCAGTAGTGCAAGGAGGCGCTTGTGTCGGTAAATGATGGCCAAGCT
CACCTCTTAGAGCAGGCAGCACCAATATAGCATCAGTCTGGCCGAGTATA
TCCGTCCCCCGATCTCCTTCTCCCTCTTGTTCCTTGTTCTTGGTTTCGTC
CCCCTCTCGTCTCGTAGCATGCCCTCATGTTTCCGGCCAATCGAAACACC
ATGTCATCAACCCCATATATGATATTGGACGCTTGCGCCTGACCCAACCT
CTATTATAGGTGACCTTGGGCAAGGACGGCGTGAGCAAGGTTCACGCGTT
CAGCGACCTGTCCGCTTTCGAGCAATCCCTCGTGGAAGAAAACGTGCCGG
CGCTCGTCACGCAAGCGCAGAAGGGCTACGATTTCGTCAAGGACAACTGA
GGCTCTCTCACCAAGCTAATGCTGTCTCTTGTGTTAGGGAAAGTCAGCGT
CGCCGCGTATGTATGTAGAGCCATGCAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1190:7355..14832-

>mRNA_L-elsbetiae_contig1190.1631.1 ID=mRNA_L-elsbetiae_contig1190.1631.1|Name=mRNA_L-elsbetiae_contig1190.1631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2100bp|location=Sequence derived from alignment at L-elsbetiae_contig1190:7355..14832- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAGCTGTTGCACGCGTTCAGATGGCGTCGAGATTGGCGGCGCCGAT
GGCGTCGAAGGCCGTCGGCGTGTCTTCGGCTCGTTCCTTCACGGGTACAG
CACGCGCGCAGAACAAGATGTCAGCTGTTGCACGCGTTCAGATGGCGTCG
AGATTGGCGGCGCCGATGGCGTCGAAGGCCGTCGGCGTGTCTTCGGCTCG
TTCCTTCACGGGTACAGCACGCGCGCAGAACAAGGTAACTGTAGTGGGCG
CGGCAGGTGGCATCGGTCAGCCCATGTCTCTTCTCCTCAAGCTGTCAGGG
AAGATCGAGCACCTGTCCTTGTTTGACATCGTCAACACCCCGGGCGTTGC
TGCCGACATCTCCCACTGCAACAGCAAGGGAAAGGTAACTGTAGTGGGCG
CGGCAGGTGGCATCGGTCAGCCCATGTCTCTTCTCCTCAAGCTGTCAGGG
AAGATCGAGCACCTGTCCTTGTTTGACATCGTCAACACCCCGGGCGTTGC
TGCCGACATCTCCCACTGCAACAGCAAGGGAAAGGTGACCGGGCACAAGG
GAGCCGAGGAGATGGCCGCGGCGCTGGACGGCGCGGATGTCGTCGTCATC
CCTGCCGGAGTCCCCCGCAAGCCGGGCATGACCCGGTGACCGGGCACAAG
GGAGCCGAGGAGATGGCCGCGGCGCTGGACGGCGCGGATGTCGTCGTCAT
CCCTGCCGGAGTCCCCCGCAAGCCGGGCATGACCCGCGACGACCTTTTCA
ACACGAACGCGTCGATCGTCAAGGGTATCGCCGACCAGTGCTCCAAGAGC
TGTCCCAAGGCATGCTTCCTCATCATCTCCAACCCGGTCAACTCAACCGT
GCCTATCTTCGCGGACGTCCTCAAGCGACGACCTTTTCAACACGAACGCG
TCGATCGTCAAGGGTATCGCCGACCAGTGCTCCAAGAGCTGTCCCAAGGC
ATGCTTCCTCATCATCTCCAACCCGGTCAACTCAACCGTGCCTATCTTCG
CGGACGTCCTCAAGGCGAACGGCGTGTACAACCCGAAGAAGCTGATGGGC
GTCACCACCCTTGACGTGTGCCGCGCCAAGACTTTCGTGGCAGAAAACCA
GGGCGAACGGCGTGTACAACCCGAAGAAGCTGATGGGCGTCACCACCCTT
GACGTGTGCCGCGCCAAGACTTTCGTGGCAGAAAACCAGGGGATGAACGT
GGACAAGGTAGACGTTACTGTAGTGGGAGGACACGCGGGCACCACCATCA
TGCCTCTTCTTTCTCAGGGATGAACGTGGACAAGGTAGACGTTACTGTAG
TGGGAGGACACGCGGGCACCACCATCATGCCTCTTCTTTCTCAGGTGAAA
GGGGCAAAGTTCTCGGCGGAGGACATCAAATCCCTCACCCACCGCATCCA
GTTCGGAGGAGACGAGGTGGTGCAGGCCAAGGACGGAGCTGGCTCGGCCA
CCCTCTCCATGGTGAAAGGGGCAAAGTTCTCGGCGGAGGACATCAAATCC
CTCACCCACCGCATCCAGTTCGGAGGAGACGAGGTGGTGCAGGCCAAGGA
CGGAGCTGGCTCGGCCACCCTCTCCATGGCGCACGCGGGCGCTTATTTCG
CGGGCAGGGTCCTCGACGGGCTGAACGGCGTGAAGGGCGTGAAGGAATGC
GCCTTCGTGGAGTCTGACCTCACGGATGCCCCCTTCTTTGCGTCTCCGGC
GCACGCGGGCGCTTATTTCGCGGGCAGGGTCCTCGACGGGCTGAACGGCG
TGAAGGGCGTGAAGGAATGCGCCTTCGTGGAGTCTGACCTCACGGATGCC
CCCTTCTTTGCGTCTCCGGTGACCTTGGGCAAGGACGGCGTGAGCAAGGT
TCACGCGTTCAGCGACCTGTCCGCTTTCGAGCAATCCCTCGTGGAAGAAA
ACGTGCCGGCGCTCGTCACGCAAGCGCAGAAGGGCTACGATTTCGTCAAG
GACAACTGAGTGACCTTGGGCAAGGACGGCGTGAGCAAGGTTCACGCGTT
CAGCGACCTGTCCGCTTTCGAGCAATCCCTCGTGGAAGAAAACGTGCCGG
CGCTCGTCACGCAAGCGCAGAAGGGCTACGATTTCGTCAAGGACAACTGA
back to top