mRNA_L-elsbetiae_contig119.1624.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A6H5KVC1_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVC1_9PHAE) HSP 1 Score: 520 bits (1339), Expect = 1.410e-179 Identity = 280/341 (82.11%), Postives = 298/341 (87.39%), Query Frame = 2 Query: 206 LISSRIVRCRPRPASALAVFGASLQPPPLASAASSGSMSA--LSTESPQPEISKRKQFKQIAVDPKVMRHLDMLGMGMEKKKIERGRKLRLYRRGAVSSAAPGATATAAKPTTFDHPTWAVKQLSSVTSLEEIPPAAAHLPEVALVGRSNVGKSTLLNALMGLKKHPNQRASVSETPGETRTLDFFQLGRGTRAKMVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEEVSRRQTNLSTMTVSALKGAGIVELQKELAALDPKPAAPAA 1222 + +S RCRPR SA S + P A SGS + STE PEISKR+QFKQIAVD KVMRHLD LG+GMEKKKIERGRKLRLYRRGAVSSA PGAT TAAKP TFDHPTWAVKQLS V+ LEEIPPAAA LPEVALVGRSNVGKSTLLNAL+GLKKHPNQRASVSETPGETRTLDFFQ+G+G RAKM++ADMPGYGFAYA+E+QR+DWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFL LYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRV FVRQQLEEVSRRQTNLS MT+SALKGAG+VELQKELA+LDPKP A AA Sbjct: 1 MFTSGFGRCRPRQVSAPGGLRLSCRQPLGAWMGRSGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSPVSKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPNQRASVSETPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSVMTLSALKGAGMVELQKELASLDPKPVAAAA 341
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A835ZG72_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG72_9STRA) HSP 1 Score: 271 bits (692), Expect = 6.250e-80 Identity = 157/305 (51.48%), Postives = 212/305 (69.51%), Query Frame = 2 Query: 320 SALSTESPQPE---ISKRKQFKQIAVDPKVMRHLDMLGMGMEKKKIERGRKLRLYRRGA--VSSAAPGATATAAKPTTFDHPTWAVKQLSSVTSLEEIPPAAAHLPEVALVGRSNVGKSTLLNALMGLKKHPNQRASVSETPGETRTLDFFQLGRGTRAKMVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYDPKGP-----SPLGKYRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEEVSRRQTNLSTMTVSALKGAGIVELQKELAALDPK 1204 SA S++ P E IS R F+ + +D KV+ +LD +G E K RK L +G + S P + A TFD PTWAVK+++S S+EEIPP + LPEVA VGRSNVGKSTLLNAL+GLK HP RA+ S PGETR++DFF+LG+G++A+++L D PG+GFA+A E++ E + ++ YLRGRGA LKRV +LLDARHGFK D+ FL++LY KG +PLG Y+PPK+Q++LTKCDLV+R +LARRV+ VR +L +V+ R+T L + VSAL+ + +LQKELA L P+ Sbjct: 63 SAGSSDDPSGEPATISNRAAFRALPIDNKVLAYLDSRDLGRELPKRASKRKRVLIEKGLHDLHSVTPESAALK----TFDVPTWAVKKVASAQSVEEIPPPS-ELPEVAFVGRSNVGKSTLLNALLGLKGHPLVRAATSMRPGETRSIDFFRLGKGSKAQLLLVDTPGFGFAFAKEEESERFIATLLQYLRGRGALLKRVCMLLDARHGFKANDVAFLQRLYARKGQDGLGRNPLGPYKPPKLQVILTKCDLVQRRELARRVSQVRARLSDVTPRETYLPVLMVSALRDQAVEDLQKELAGLVPQ 362
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A7S2GV24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV24_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.140e-46 Identity = 96/197 (48.73%), Postives = 129/197 (65.48%), Query Frame = 2 Query: 623 EVALVGRSNVGKSTLLNALMGLKKHPNQRASVSETPGETRTLDFFQLGRGTRAKMVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYDPKG--PSPLGKY---RPPKIQILLTKCDLVKRIDLARRVAFVRQQL-EEVSRRQTNLSTMTVSALKGAGIVELQKELAAL 1195 E+ALVGRSNVGKS+LLN ++ + P +A PG T+ L F+ TR + L D+PGY FAY +++ E W LM+ YLR RG LKRV LLLDARHG K D +FL LY+P+ P G++ PPK+Q++LTKCDLV R DL RR+ VR+++ +E+ R L + VSA +G GI+ELQ+ELA+L Sbjct: 40 EIALVGRSNVGKSSLLNTVLNISASPKNKAPTGTRPGVTQKLHFY--AAATRKPLTLVDVPGYSFAYEDQERIEAWNDLMLKYLRHRGPSLKRVCLLLDARHGLKVIDRQFLRLLYEPRPIVDPPPGEHVLWDPPKLQVILTKCDLVDRFDLVRRIQRVREEMSDELPSRAGRLQAIMVSAREGKGIMELQRELASL 234
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: B7FQ16_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ16_PHATC) HSP 1 Score: 165 bits (418), Expect = 5.660e-42 Identity = 133/350 (38.00%), Postives = 182/350 (52.00%), Query Frame = 2 Query: 350 EISKRKQFKQIAVDPKVMRHLDMLGMGM----EKKK-----IERGRKLRLYRRGAVSSAAPGATATAAK------PTTFDHPTWAVKQLSSVTSLEEIPPAA-AHLPEVALVGRSNVGKSTLLNALMGLKKHPN--------------------QRASVSETPGETRTLDFFQLGRGTRAK--------MVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAP-LKRVMLLLDARHGFKKADIEFLEQLYDPK----------GPSPLGKYRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEEVSRRQ-TNLSTMTVSALKGAG------------IVELQKELAAL 1195 ++S R+ FK++AV P + ++ ++G+G+ KKK IE GR R R G + P AT + P F + VK + +V +L++ PA ++PE+ L GRSNVGKSTLLNAL+ KH + +A+ S+ PGETR + F+QL + + L D+PGYGFAYA E+ ++ LM YL RG LKRV+LL+DARHG KKAD++FL L + G PP IQ++LTKCDLV R DLARRVA VR QL + R+ + L M VSA G G ++ELQKE+ AL Sbjct: 19 KVSNRRSFKELAVHPSIHNYIQLIGVGIPPRRSKKKSQRIAIEPGR-FRDRRGGRAMN--PEATEDQKRERHWKPPPPFGPKAFPVKVVGNVATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNAQLPP-IQLVLTKCDLVTRADLARRVAQVRSQLSDCFIREPSQLPVMLVSARAGVGYNNVVGDKARGGVLELQKEIVAL 364
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A7S1VXG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG1_9STRA) HSP 1 Score: 168 bits (425), Expect = 8.120e-42 Identity = 118/268 (44.03%), Postives = 150/268 (55.97%), Query Frame = 2 Query: 560 VKQLSSVTSLEE-IPPAAAHLPEVALVGRSNVGKSTLLNALM--------------------GLKKHPNQRASVSETPGETRTLDFFQL------------GRGTRAKM--VLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYDP------KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEE-VSRRQTNLSTMTVSALKG------------AGIVELQKELAALDP 1201 VK L S SLEE +P ++ L EVAL GRSNVGKSTLLNAL+ K +A +S+ PGETR + +QL G+ + KM +LAD+PGYGFA+A E++ ++W LM YL RG LKRV+LL+DARHG K AD EFL L + +G +P P IQI+LTKCDLV + DLARRV VRQQL + + R ++L M VSA G G++ELQ+ELAAL P Sbjct: 252 VKLLGSSGSLEEELPKSSKGLSEVALAGRSNVGKSTLLNALLYGNQLGKPQERQYRRGKTPENAKLPKGVKAVMSDKPGETRRITLYQLSSEIIKPPKDEQGKKHKEKMSLLLADLPGYGFAFASEEKYKEWHDLMRHYLLDRGKSLKRVLLLIDARHGMKNADFEFLSSLQESLKSTSKEGATPKNVRELPPIQIVLTKCDLVTQDDLARRVVQVRQQLSDNLLREPSSLPVMLVSAKAGLGYNNIRGGIARGGVLELQRELAALVP 519
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A7S1ZZ98_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ98_TRICV) HSP 1 Score: 164 bits (415), Expect = 1.290e-40 Identity = 118/278 (42.45%), Postives = 153/278 (55.04%), Query Frame = 2 Query: 560 VKQLSSVTSL-EEIPPAAAHLPEVALVGRSNVGKSTLLNALM-----------------------GLKKHPNQRASVSETPGETRTLDFFQLG-----------RGTRAKM--VLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYDP------KGPSPLGK------YRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEEVSRRQ-TNLSTMTVSALKGAG------------IVELQKELAALDPKP 1207 VK L SL +++P +++ LPEVAL GRSNVGKSTLLNAL+ +K ++A VS+ PGET+ + +QL R ++KM VLAD+PGYGFAYA E + W LM YL RG LKR++LL+DARHGFK AD FLE L + KG K + P IQI+LTKCDL K+ DLARRV V++QL + +RQ ++L M VSA G G +++LQ+ELAAL P P Sbjct: 218 VKVLGKAGSLNDDMPRSSSGLPEVALAGRSNVGKSTLLNALLYGNQPSRDGHSVERMYQRGKTPERMKLPRGEKAKVSDKPGETQDITLYQLSSDMVFLNKEGQRENKSKMSLVLADLPGYGFAYASENKATTWSELMKHYLLRRGESLKRILLLIDARHGFKNADYAFLETLQNALKEGQKKGAHVSSKQQCGLEFDLPPIQIVLTKCDLCKQDDLARRVVQVKEQLSKSLKRQPSSLPVMLVSAKTGVGYNNIRRGKARGGMLQLQRELAALVPFP 495
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A812TAA1_SYMMI (EngB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TAA1_SYMMI) HSP 1 Score: 156 bits (395), Expect = 2.780e-40 Identity = 96/221 (43.44%), Postives = 131/221 (59.28%), Query Frame = 2 Query: 602 PAAAHLPEVALVGRSNVGKSTLLNALMGLKKHPNQRASVSETPGETRTLDFFQLGRGTRAK---MVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLY------------DPKGPSPL--------GKYRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEEVSRRQTNLSTMTVSALKGAGIVELQKELAAL 1195 P PEVA++GRSN GKSTL+N+L+G +RA VS PGET+ L F+ L + ++K + + DMPGYGF++ EK+ + L +Y+R RG LKRV+L++DARHG K+ D L L DP + K+QI+LTKCDLV+R+DLARR+A VR Q+ + + +L M VSA KG GIVELQKEL++L Sbjct: 18 PMLGECPEVAIIGRSNAGKSTLVNSLLGYDSSYTKRAPVSSKPGETQALQFYVLRKQYKSKQPALGIVDMPGYGFSFTSEKEAQRCFTLNSSYIRLRGKNLKRVLLVVDARHGLKRTDFRCLHDLMSNTFRDAGDITTDPSADFDVKFDHSKKSANDATWKLQIILTKCDLVERLDLARRIAAVRDQVR-ANFFEDDLPVMMVSAAKGLGIVELQKELSSL 237
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A1Z5JKA0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA0_FISSO) HSP 1 Score: 150 bits (379), Expect = 3.100e-37 Identity = 98/279 (35.13%), Postives = 151/279 (54.12%), Query Frame = 2 Query: 356 SKRKQFKQIAVDPKVMRHLDMLGMGMEKKKIERGRKLRLYRRGAVSSAAPGATATAAKPTTFD---------HPTWAVKQLSSVTSLEE---IPPAAAHLPEVALVGRSNVGKSTLLNALMGLKKHPNQ----------------------RASVSETPGETRTLDFFQLGRG--TRAKMVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYDP---KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRV 1075 S+++QF+ VDP +++++ +G+G+ ++ R+ + P + A PT++ P + +S+V +L+E PP PE+AL+GRSNVGKSTLLN L+ ++ N+ +A S PGET+ + F+ L G + ++ L D+PGYGFAYA E+ ++ L+ ++L+ R LKR++LL+DARHG KKADI+FL L D K + K P IQ++LTKCDLV + DLARRV Sbjct: 39 SQKQQFRDTPVDPSILKYITSVGVGIPPRR----------RKNRRNDNTPDEVSNANNPTSWKVPLPFGPNASPVRVIASVSAVNTLDENMGFPPVHKERPEIALIGRSNVGKSTLLNTLLYANRNENRQQEGGRAGRRSRIQTIELPRGIKAVTSNKPGETKHVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDELIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTLLEDELVYKDSANNKKKTLPPIQVVLTKCDLVHQADLARRV 307
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: K0SSQ4_THAOC (EngB-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSQ4_THAOC) HSP 1 Score: 150 bits (379), Expect = 6.990e-36 Identity = 108/275 (39.27%), Postives = 144/275 (52.36%), Query Frame = 2 Query: 560 VKQLSSVTSLEEIPPAAAHLPEVALVGRSNVGKSTLLNALM--------------------GLKKHPNQRASVSETPGETRTLDFFQLGRG-------------------TRAKMVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYD-------PKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVAFVRQQLEE-VSRRQTNLSTMTVSALKG------------AGIVELQKELAALDPKP 1207 VK L + +SL + P L EVA+ GRSNVGKSTLLNAL+ G K +A+ S PGET+ L F+QL ++L D+PG+G+A A + +DW LM+ YL R + LKR++LLLDARHGFKK D EFL L D G + + + PP +QI+LTKCDLVK+ DLARRV V++ L + + R ++L M VSA G G++ELQ+ELA+L P P Sbjct: 187 VKILGTASSLNDKLPRPRGLNEVAIAGRSNVGKSTLLNALLYGNIDEHLSARKFRRGRVPEGAKIPRGNKAATSVKPGETKKLTFYQLSAEFTPLREDQSDISDKRMTDKADMSLLLVDLPGFGYADASTRATKDWNDLMIHYLLKRRS-LKRILLLLDARHGFKKTDFEFLTSLQDGLGTRIQESGGNKIRRELPP-LQIVLTKCDLVKQADLARRVVAVKRDLSDFLLREPSSLPVMLVSAKPGLGFNNVRGGKPLGGVLELQRELASLVPMP 459
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Match: A0A7S2KMU0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KMU0_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.490e-36 Identity = 119/310 (38.39%), Postives = 150/310 (48.39%), Query Frame = 2 Query: 560 VKQLSSVTSL-EEIPPAAAHLPEVALVGRSNVGKSTLLNALM--------------------GLKKHPNQRASVSETPGETRTLDFFQL------------------------------------------GRGTRAKMVLADMPGYGFAYAHEKQREDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLEQLYD----PKGPSPLGKYRP--------------PKIQILLTKCDLVKRIDLARRVAFVRQQLEE-VSRRQTNLSTMTVSA--------LKGA------GIVELQKELAALDP 1201 VK L S SL +E+P + L EVAL GRSNVGKSTLLNAL+ G K +A S+ PGET+ + F+QL R + +VL D+PG+GFA+A E E+W LM YL R LKR++LLLDARHGFK AD EFLE L + G S P IQI+LTKCDLVK++DLARRV VRQQL + ++R ++L M VSA ++GA G++ELQKELA+L P Sbjct: 57 VKILGSAASLNDELPRESKGLSEVALAGRSNVGKSTLLNALLYGNIDVNLTPRKYQRGRTPEGAKLPRGVKAVTSDKPGETKRMSFYQLTADVAVGAASSGSENNEGEVKEQVKVDDDDKAATDGEAASEIDRHLKYSLVLVDLPGFGFAFAKEGASEEWNDLMNHYLLERRT-LKRILLLLDARHGFKLADFEFLEALQEGLKQQNGISSXXXXXXXXXXXXXXXXXXELPPIQIVLTKCDLVKQVDLARRVVVVRQQLSDALAREPSSLPVMLVSARAGLGFNNIRGAEQLPMGGVLELQKELASLVP 365 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig119.1624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig119.1624.1 >prot_L-elsbetiae_contig119.1624.1 ID=prot_L-elsbetiae_contig119.1624.1|Name=mRNA_L-elsbetiae_contig119.1624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp MMLISSRIVRCRPRPASALAVFGASLQPPPLASAASSGSMSALSTESPQPback to top mRNA from alignment at L-elsbetiae_contig119:9717..17446- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig119.1624.1 ID=mRNA_L-elsbetiae_contig119.1624.1|Name=mRNA_L-elsbetiae_contig119.1624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7730bp|location=Sequence derived from alignment at L-elsbetiae_contig119:9717..17446- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig119:9717..17446- >mRNA_L-elsbetiae_contig119.1624.1 ID=mRNA_L-elsbetiae_contig119.1624.1|Name=mRNA_L-elsbetiae_contig119.1624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2106bp|location=Sequence derived from alignment at L-elsbetiae_contig119:9717..17446- (Laminarionema elsbetiae ELsaHSoW15)back to top |