mRNA_L-elsbetiae_contig1189.1611.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1189.1611.1
Unique NamemRNA_L-elsbetiae_contig1189.1611.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A1V0SA94_9VIRU (GIY-YIG nuclease n=1 Tax=Catovirus CTV1 TaxID=1977631 RepID=A0A1V0SA94_9VIRU)

HSP 1 Score: 116 bits (291), Expect = 3.530e-29
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 1
Query:   10 VYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQKRGD 372
            +YV+  EN KYY+GK+ +L  R LEH  G G  + WTKKYKP++I++T   AD  +ED  T   M +YG+D+VRGG Y    LS+ T+ H+      A D C  CG   HF+K+C++K  D
Sbjct:    4 IYVIRCENEKYYIGKSANLENRILEHFIGNG--SEWTKKYKPIEIIQTIENADDFDEDKYTKIYMSKYGIDNVRGGTYCQIKLSQHTKEHLKKELLGASDKCYKCGQTGHFVKNCRKKYKD 122          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0H8B8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0H8B8_9ZZZZ)

HSP 1 Score: 111 bits (277), Expect = 2.590e-27
Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQKRGDRTAK 384
            M  +YVL LENNKYY+GKT     R   H N  G  +AWTKKYKP+++ E     D  +ED  T   M +YG+++VRGG YV  +L+  T  ++ H      +LC  CGS DHF+K+C  K      K
Sbjct:    1 MVYIYVLQLENNKYYIGKTSTPDFRLDAHFNNNG--SAWTKKYKPIRLHELIPNCDDYDEDKYTKIYMDKYGINNVRGGSYVQIILNDATIKYLNHITNSTNNLCFNCGSSDHFIKNCNIKNNVENIK 126          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0DJP0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DJP0_9ZZZZ)

HSP 1 Score: 108 bits (271), Expect = 4.730e-27
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   10 VYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCK 357
            +YVL L+  KYYVGK+ D+  RF +H+NGQG S  WTKKYKP+ ++E+  G   L ED IT   M++YG+++VRGG YV   L +    ++      A D C  CG   H+ K C+
Sbjct:    6 IYVLKLQGGKYYVGKSSDVIGRFQQHMNGQGSS--WTKKYKPMSLVESRDGVSPLMEDMITKEYMVKYGIENVRGGAYVTEELDEVQEYNLQKELWAASDCCTECGRKGHWAKTCR 119          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0F0T2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F0T2_9ZZZZ)

HSP 1 Score: 107 bits (268), Expect = 2.570e-26
Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 1
Query:   10 VYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQKRGDRTAK 384
            +YVL LE  KYY+GK++D+ +R +EH  G G  + WTKKYKPLK+ +T       EED IT   M++YG+++VRGG Y    L++     I +  R A D C  CG   HF+  C   + ++ ++
Sbjct:    6 IYVLLLEEGKYYIGKSNDVFKRCIEHFEGSG--SCWTKKYKPLKLQKTIENVSPFEEDKITKEYMLKYGIENVRGGTYTQIELTENQIQSITYELRGAMDECLKCGKKGHFVAECVYYKQNKKSR 128          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A1V0SB80_9VIRU (GIY-YIG nuclease and ricin-type beta-trefoil lectin domain protein n=1 Tax=Catovirus CTV1 TaxID=1977631 RepID=A0A1V0SB80_9VIRU)

HSP 1 Score: 108 bits (270), Expect = 3.420e-26
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 1
Query:    1 MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQK 363
            M+ +YV+  EN KYY+GK+     R LEH  G G  + WTKKYKP++I++    AD  +ED  T   M +YG+D+VRGG Y    LSK  + H+      A D C +CG   HF+K+C +K
Sbjct:    1 MTNIYVIKCENEKYYIGKSFYPENRVLEHFLGNG--SEWTKKYKPVEIIQIIKNADNFDEDKYTKIYMSKYGIDNVRGGTYCQIKLSKSIKEHLNKELLGASDKCYLCGQYGHFIKNCNKK 119          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0HQA0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HQA0_9ZZZZ)

HSP 1 Score: 102 bits (254), Expect = 2.410e-25
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 1
Query:    1 MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQ 360
            M  +Y+L LE  K+YVGKT + + R   H N  G  +AWTK YKP+K++E     D  +ED  T   M +YG+D+VRGG +V   L + T+ H+        D C  CG   HF K CK+
Sbjct:    1 MVYIYILQLEKGKFYVGKTINPSFRLDSHFNSNG--SAWTKLYKPIKMIELIPNCDDYDEDKYTRMFMDKYGIDNVRGGSFVSVELEQSTKTHLTQMKNGTNDKCFNCGKSGHFAKDCKE 118          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0LZ97_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LZ97_9ZZZZ)

HSP 1 Score: 103 bits (256), Expect = 9.230e-25
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 1
Query:    1 MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQK 363
            M+ +Y+L LE  +YY+G+++++  R+ EHING G  +AWT+KYKP+ + +T       EED IT   M +YG+D VRGG YV   LSK     +      A DLC  CG   HF+K C  K
Sbjct:    1 MTNIYILLLEEERYYIGRSNNVLFRYQEHINGNG--SAWTRKYKPISLEKTITNVSPFEEDKITKEYMSKYGIDKVRGGSYVEIELSKFHIDALKMEIWSAKDLCTNCGRFGHFIKDCYAK 119          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0JUE5_9ZZZZ (GIY-YIG domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JUE5_9ZZZZ)

HSP 1 Score: 103 bits (256), Expect = 1.070e-24
Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 1
Query:    1 MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQK 363
            M  +Y+L L+NNKYY+GKT D+  RF +HING G S  WTKKYKP+ I++        +ED      M +YG+++VRGG Y    L   +   +      + +LC  CG   HF+K C  K
Sbjct:    1 MEYIYILKLKNNKYYIGKTQDVENRFKQHINGVGSS--WTKKYKPISIIKQIKSTSQFDEDKYVKEYMAKYGIENVRGGTYTSIELDDISLFQLQKELWHSKNLCTRCGRNTHFIKDCYAK 119          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0E0W1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E0W1_9ZZZZ)

HSP 1 Score: 101 bits (252), Expect = 2.800e-24
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:    1 MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQ 360
            M  +Y+L LE  KYYVGKT + + R   H N  G  +AWTK YKP+K++E     D  +ED  T   M +YG+D+VRGG +V   L + T  H+        D C  CG+  HF K CK+
Sbjct:    1 MVYIYILQLEQGKYYVGKTINPSFRLDSHFNSNG--SAWTKLYKPIKMIELIPNCDDYDEDKYTRMFMDKYGIDNVRGGSFVSVELEQSTINHLTQMKNGTNDKCFKCGTSGHFAKDCKK 118          
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Match: A0A6C0H0M8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0H0M8_9ZZZZ)

HSP 1 Score: 102 bits (255), Expect = 4.630e-24
Identity = 45/118 (38.14%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   10 VYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILETYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARMACDLCAVCGSPDHFMKHCKQK 363
            +Y+L L    YY+GKT+++ +RFLEH++G+G  +AWTKK++P+++ +  + A   +ED      M +YG++ VRGG YV   L +    ++      A D C  CG   HF+K CK+K
Sbjct:    5 IYILKLTGGNYYIGKTNNVEKRFLEHVSGKG--SAWTKKHEPIEVSQVISNASPFDEDRYVKEYMHKYGINKVRGGTYVTEELDETQECNLKKEIWGANDCCTQCGRKGHFVKDCKEK 120          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1189.1611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V0SA94_9VIRU3.530e-2944.63GIY-YIG nuclease n=1 Tax=Catovirus CTV1 TaxID=1977... [more]
A0A6C0H8B8_9ZZZZ2.590e-2742.97Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0DJP0_9ZZZZ4.730e-2743.97Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0F0T2_9ZZZZ2.570e-2640.00Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A1V0SB80_9VIRU3.420e-2642.98GIY-YIG nuclease and ricin-type beta-trefoil lecti... [more]
A0A6C0HQA0_9ZZZZ2.410e-2540.83Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0LZ97_9ZZZZ9.230e-2542.98Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0JUE5_9ZZZZ1.070e-2440.50GIY-YIG domain-containing protein n=1 Tax=viral me... [more]
A0A6C0E0W1_9ZZZZ2.800e-2441.67Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0H0M8_9ZZZZ4.630e-2438.14Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1189contigL-elsbetiae_contig1189:5297..5728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.2
Seed ortholog evalue3.3e-18
Seed eggNOG ortholog4792.ETI40842
KEGG koko:K09250
Hectar predicted targeting categoryother localisation
EggNOG free text desc.zinc finger
EggNOG OGs2E365@1,2SAAX@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons1
Model size432
Cds size432
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815389.0074909-CDS-L-elsbetiae_contig1189:5296..57281622815389.0074909-CDS-L-elsbetiae_contig1189:5296..5728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1189 5297..5728 +
1691682874.2416964-CDS-L-elsbetiae_contig1189:5296..57281691682874.2416964-CDS-L-elsbetiae_contig1189:5296..5728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1189 5297..5728 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1189.1611.1prot_L-elsbetiae_contig1189.1611.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1189 5297..5728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1189.1611.1

>prot_L-elsbetiae_contig1189.1611.1 ID=prot_L-elsbetiae_contig1189.1611.1|Name=mRNA_L-elsbetiae_contig1189.1611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp
MSVVYVLSLENNKYYVGKTDDLTRRFLEHINGQGRSAAWTKKYKPLKILE
TYAGADGLEEDTITLACMIRYGVDHVRGGPYVLTVLSKETRAHILHRARM
ACDLCAVCGSPDHFMKHCKQKRGDRTAKCGKCNSCNHFTEDCH*
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mRNA from alignment at L-elsbetiae_contig1189:5297..5728+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1189.1611.1 ID=mRNA_L-elsbetiae_contig1189.1611.1|Name=mRNA_L-elsbetiae_contig1189.1611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=432bp|location=Sequence derived from alignment at L-elsbetiae_contig1189:5297..5728+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGTGTTGTTTACGTGCTTTCACTGGAAAATAATAAATATTACGTGGG AAAAACAGACGACCTAACAAGGCGGTTCTTGGAGCACATCAACGGCCAGG GGAGGTCGGCCGCATGGACGAAAAAATACAAGCCTCTTAAGATACTGGAA ACTTACGCGGGGGCGGACGGTCTGGAAGAAGACACAATAACGCTGGCTTG CATGATTAGATACGGCGTAGACCACGTTCGCGGGGGGCCTTACGTGTTGA CCGTGCTGTCGAAAGAAACCAGAGCCCACATACTACACCGTGCCAGAATG GCCTGCGATTTGTGCGCCGTGTGCGGATCTCCCGACCATTTCATGAAGCA CTGCAAGCAAAAGCGTGGCGACAGAACCGCGAAATGTGGAAAATGCAACA GCTGCAATCACTTCACCGAGGACTGCCACTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1189:5297..5728+

>mRNA_L-elsbetiae_contig1189.1611.1 ID=mRNA_L-elsbetiae_contig1189.1611.1|Name=mRNA_L-elsbetiae_contig1189.1611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig1189:5297..5728+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGTGTTGTTTACGTGCTTTCACTGGAAAATAATAAATATTACGTGGG
AAAAACAGACGACCTAACAAGGCGGTTCTTGGAGCACATCAACGGCCAGG
GGAGGTCGGCCGCATGGACGAAAAAATACAAGCCTCTTAAGATACTGGAA
ACTTACGCGGGGGCGGACGGTCTGGAAGAAGACACAATAACGCTGGCTTG
CATGATTAGATACGGCGTAGACCACGTTCGCGGGGGGCCTTACGTGTTGA
CCGTGCTGTCGAAAGAAACCAGAGCCCACATACTACACCGTGCCAGAATG
GCCTGCGATTTGTGCGCCGTGTGCGGATCTCCCGACCATTTCATGAAGCA
CTGCAAGCAAAAGCGTGGCGACAGAACCGCGAAATGTGGAAAATGCAACA
GCTGCAATCACTTCACCGAGGACTGCCACTAAATGAGTGTTGTTTACGTG
CTTTCACTGGAAAATAATAAATATTACGTGGGAAAAACAGACGACCTAAC
AAGGCGGTTCTTGGAGCACATCAACGGCCAGGGGAGGTCGGCCGCATGGA
CGAAAAAATACAAGCCTCTTAAGATACTGGAAACTTACGCGGGGGCGGAC
GGTCTGGAAGAAGACACAATAACGCTGGCTTGCATGATTAGATACGGCGT
AGACCACGTTCGCGGGGGGCCTTACGTGTTGACCGTGCTGTCGAAAGAAA
CCAGAGCCCACATACTACACCGTGCCAGAATGGCCTGCGATTTGTGCGCC
GTGTGCGGATCTCCCGACCATTTCATGAAGCACTGCAAGCAAAAGCGTGG
CGACAGAACCGCGAAATGTGGAAAATGCAACAGCTGCAATCACTTCACCG
AGGACTGCCACTAA
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