mRNA_L-elsbetiae_contig11869.1600.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11869.1600.1
Unique NamemRNA_L-elsbetiae_contig11869.1600.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: D7G4L0_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4L0_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 1.870e-151
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 1 
Query:    1 TSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            TSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSIL+ANLRKSPVSDDVDM AMAEATDGFSGADLT
Sbjct:  574 TSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILRANLRKSPVSDDVDMDAMAEATDGFSGADLT 806
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A7S0BGS9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGS9_9RHOD)

HSP 1 Score: 355 bits (910), Expect = 5.680e-120
Identity = 170/231 (73.59%), Postives = 200/231 (86.58%), Query Frame = 1 
Query:    7 NPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            NPS+LRE  VEVP+VTW DIGGLE+VK ELQE +QYPVE+  ++ KFGM PSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESE+N+RE+F+KAR ++PC+LFFDE+DSIAR RG S      S  GDRVINQILTE+DGVG  K VF+IGATNRPDILD ++ RPG LDQL+YIPLPDHDSR+SILK+ LRKSPV+ DVD+ A+A ATDG+SGADLT
Sbjct:   34 NPSALREMAVEVPNVTWQDIGGLENVKFELQETVQYPVEHPEMFEKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESESNVREVFDKARQSAPCVLFFDELDSIARARGSSAGDA--SGAGDRVINQILTEVDGVGARKNVFVIGATNRPDILDPAIMRPGRLDQLVYIPLPDHDSRVSILKSALRKSPVAADVDLMAIARATDGYSGADLT 262
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A852KNU9_UROIN (TERA ATPase (Fragment) n=38 Tax=Neognathae TaxID=8825 RepID=A0A852KNU9_UROIN)

HSP 1 Score: 350 bits (898), Expect = 2.140e-118
Identity = 168/232 (72.41%), Postives = 201/232 (86.64%), Query Frame = 1 
Query:    4 SNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            SNPS+LRET+VEVP VTW DIGGLEDVKRELQE++QYPVE+   + KFGM+PSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RE+F+KAR A+PC+LFFDE+DSIA+ RGG+      +   DRVINQILTE+DG+   K VFIIGATNRPDI+D ++ RPG LDQLIYIPLPD  SR++IL+ANLRKSPV+ DVD+  +A+ T+GFSGADLT
Sbjct:    7 SNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGA--ADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILRANLRKSPVAKDVDLDFLAKMTNGFSGADLT 236
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A7K9ACK6_9PASS (TERA ATPase (Fragment) n=1 Tax=Grallaria varia TaxID=117165 RepID=A0A7K9ACK6_9PASS)

HSP 1 Score: 351 bits (901), Expect = 4.580e-118
Identity = 169/232 (72.84%), Postives = 201/232 (86.64%), Query Frame = 1 
Query:    4 SNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            SNPS+LRET+VEVP VTW DIGGLEDVKRELQE++QYPVE+   + KFGM+PSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RE+F+KAR A+PC+LFFDE+DSIA+ RGG+      +   DRVINQILTE+DG+   K VFIIGATNRPDI+D ++ RPG LDQLIYIPLPD  SR++ILKANLRKSPV+ DVD+  +A+ T+GFSGADLT
Sbjct:   62 SNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGA--ADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLT 291
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A7J8EHB1_MOLMO (Valosin containing protein n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8EHB1_MOLMO)

HSP 1 Score: 352 bits (903), Expect = 5.090e-118
Identity = 169/232 (72.84%), Postives = 202/232 (87.07%), Query Frame = 1 
Query:    4 SNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            SNPS+LRET+VEVP VTW DIGGLEDVKRELQE++QYPVE+   + KFGM+PSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RE+F+KAR A+PC+LFFDE+DSIA+ RGG+      +   DRVINQILTE+DG+   K VFIIGATNRPDI+D ++ RPG LDQLIYIPLPD  SR++ILKANLRKSPV+ DVD++ +A+ T+GFSGADLT
Sbjct:   87 SNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGA--ADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLT 316
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A6I9NCU9_9TELE (transitional endoplasmic reticulum ATPase n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NCU9_9TELE)

HSP 1 Score: 352 bits (904), Expect = 6.760e-118
Identity = 168/232 (72.41%), Postives = 203/232 (87.50%), Query Frame = 1 
Query:    4 SNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            SNPS+LRET+VEVP+VTW DIGGLEDVKRELQE++QYPVE+   + KFGM+PSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RE+F+KAR A+PC+LFFDE+DSIA+ RGG+      +   DRVINQILTE+DG+   K VFIIGATNRPDI+D ++ RPG LDQLIYIPLPD  SR++ILKANLRKSP++ DVD++ +A+ T+GFSGADLT
Sbjct:  107 SNPSALRETVVEVPNVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGA--ADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMNILKANLRKSPIAKDVDLEFLAKMTNGFSGADLT 336
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A7S2KIG8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KIG8_9STRA)

HSP 1 Score: 350 bits (897), Expect = 9.660e-118
Identity = 172/232 (74.14%), Postives = 199/232 (85.78%), Query Frame = 1 
Query:    4 SNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            S+PS+LR+  VEVPDV W DIGGLED KRELQEM++YP+E+  L+ KFGM  S+GVLFYGPPGCGKTL+AKA+AN+C ANFISVKGPELL+ WFG SEAN+RELF+KARAASPCILFFDEMDSIAR RGG XXX   SD  DRVINQ+L+EIDG+G  K +FIIGATNRPDILD  + RPG LDQLIYIPLPD +SR+SI KANLRKSPV+DD+  + +AE TDGFSGAD+T
Sbjct:   31 SDPSTLRDNKVEVPDVKWIDIGGLEDTKRELQEMVRYPIEHRHLFEKFGMMASRGVLFYGPPGCGKTLMAKAIANECGANFISVKGPELLNAWFGGSEANVRELFDKARAASPCILFFDEMDSIARARGGXXXXA--SDTSDRVINQLLSEIDGIGGGKTLFIIGATNRPDILDPGLMRPGRLDQLIYIPLPDFESRVSIFKANLRKSPVADDITFEQLAEVTDGFSGADIT 260
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A8I3W0L9_CALJA (Phosphatidylinositol glycan anchor biosynthesis class O n=1 Tax=Callithrix jacchus TaxID=9483 RepID=A0A8I3W0L9_CALJA)

HSP 1 Score: 352 bits (903), Expect = 1.350e-117
Identity = 169/232 (72.84%), Postives = 202/232 (87.07%), Query Frame = 1 
Query:    4 SNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            SNPS+LRET+VEVP VTW DIGGLEDVKRELQE++QYPVE+   + KFGM+PSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RE+F+KAR A+PC+LFFDE+DSIA+ RGG+      +   DRVINQILTE+DG+   K VFIIGATNRPDI+D ++ RPG LDQLIYIPLPD  SR++ILKANLRKSPV+ DVD++ +A+ T+GFSGADLT
Sbjct:  118 SNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGA--ADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLT 347
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: W7TW67_9STRA (Transitional endoplasmic reticulum atpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW67_9STRA)

HSP 1 Score: 365 bits (938), Expect = 2.070e-117
Identity = 177/231 (76.62%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    7 NPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            NPS+LRET VEVPDVTW D+GGLEDVKREL E IQYPVEY   + KFGM  ++GVLFYGPPGCGKTLLAKAVAN+C ANFIS+KGPELL+MWFGESEAN+R+LF+KARAA+PCILFFDEMDSIA+ RG        S+ GDRVINQILTEIDGVG  K VF+IGATNRPDILDS++TRPG LDQL+YIPLPD+ SRLSI  ANLRKSPV+ DVD++AMAEAT GFSGAD++
Sbjct:  613 NPSALRETQVEVPDVTWEDVGGLEDVKRELAETIQYPVEYAAKYEKFGMPAARGVLFYGPPGCGKTLLAKAVANECGANFISIKGPELLTMWFGESEANVRDLFDKARAAAPCILFFDEMDSIAKARGSGAGG---SEAGDRVINQILTEIDGVGARKSVFVIGATNRPDILDSAITRPGRLDQLVYIPLPDYKSRLSIFNANLRKSPVAPDVDLEAMAEATQGFSGADIS 840
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BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Match: A0A7S3VU74_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3VU74_9SPIT)

HSP 1 Score: 354 bits (908), Expect = 2.620e-117
Identity = 171/233 (73.39%), Postives = 201/233 (86.27%), Query Frame = 1 
Query:    1 TSNPSSLRETMVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFYGPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKARAASPCILFFDEMDSIARGRGGSXXXXXXSDVGDRVINQILTEIDGVGPAKMVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSPVSDDVDMQAMAEATDGFSGADLT 699
            TSNPS+LRET++EVP+VTW DIGGLE VKRELQE++QYPVE+   + KFGMSPSKGVLFYGPPGCGKTLLAKA+AN+C ANFIS+KGPELL+MWFGESEAN+RELF+KAR A+PC+LFFDE+DSIAR RG S      +  GDRVINQILTE+DG+G  K VFIIGATNRPDI+D +V RPG LDQLIYIPLPD  SR++ILKA LRKSP++ DVD++ + + T GFSGADLT
Sbjct:  195 TSNPSALRETVIEVPNVTWDDIGGLEGVKRELQEVVQYPVEFPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARGAAPCVLFFDELDSIARARGSSGGDAGGA--GDRVINQILTEMDGMGAKKSVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEGSRMNILKACLRKSPIAPDVDLEYLGKTTHGFSGADLT 425
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11869.1600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4L0_ECTSI1.870e-15199.14Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S0BGS9_9RHOD5.680e-12073.59Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A852KNU9_UROIN2.140e-11872.41TERA ATPase (Fragment) n=38 Tax=Neognathae TaxID=8... [more]
A0A7K9ACK6_9PASS4.580e-11872.84TERA ATPase (Fragment) n=1 Tax=Grallaria varia Tax... [more]
A0A7J8EHB1_MOLMO5.090e-11872.84Valosin containing protein n=1 Tax=Molossus moloss... [more]
A0A6I9NCU9_9TELE6.760e-11872.41transitional endoplasmic reticulum ATPase n=1 Tax=... [more]
A0A7S2KIG8_9STRA9.660e-11874.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8I3W0L9_CALJA1.350e-11772.84Phosphatidylinositol glycan anchor biosynthesis cl... [more]
W7TW67_9STRA2.070e-11776.62Transitional endoplasmic reticulum atpase n=2 Tax=... [more]
A0A7S3VU74_9SPIT2.620e-11773.39Hypothetical protein n=2 Tax=Choreotrichia TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11869contigL-elsbetiae_contig11869:720..5399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.2
Seed ortholog evalue4.6e-120
Seed eggNOG ortholog2880.D7G4L0
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Exons5
Model size699
Cds size669
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11869.1600.1prot_L-elsbetiae_contig11869.1600.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11869 750..5399 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815388.0896766-UTR-L-elsbetiae_contig11869:719..7491622815388.0896766-UTR-L-elsbetiae_contig11869:719..749Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11869 720..749 +
1691682873.6185446-UTR-L-elsbetiae_contig11869:719..7491691682873.6185446-UTR-L-elsbetiae_contig11869:719..749Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11869 720..749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815388.1040962-CDS-L-elsbetiae_contig11869:749..8211622815388.1040962-CDS-L-elsbetiae_contig11869:749..821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 750..821 +
1691682873.6295044-CDS-L-elsbetiae_contig11869:749..8211691682873.6295044-CDS-L-elsbetiae_contig11869:749..821Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 750..821 +
1622815388.114871-CDS-L-elsbetiae_contig11869:2302..24591622815388.114871-CDS-L-elsbetiae_contig11869:2302..2459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 2303..2459 +
1691682873.6411424-CDS-L-elsbetiae_contig11869:2302..24591691682873.6411424-CDS-L-elsbetiae_contig11869:2302..2459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 2303..2459 +
1622815388.1242266-CDS-L-elsbetiae_contig11869:3639..38111622815388.1242266-CDS-L-elsbetiae_contig11869:3639..3811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 3640..3811 +
1691682873.6579804-CDS-L-elsbetiae_contig11869:3639..38111691682873.6579804-CDS-L-elsbetiae_contig11869:3639..3811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 3640..3811 +
1622815388.1349688-CDS-L-elsbetiae_contig11869:4295..44081622815388.1349688-CDS-L-elsbetiae_contig11869:4295..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 4296..4408 +
1691682873.6708574-CDS-L-elsbetiae_contig11869:4295..44081691682873.6708574-CDS-L-elsbetiae_contig11869:4295..4408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 4296..4408 +
1622815388.1439934-CDS-L-elsbetiae_contig11869:5244..53991622815388.1439934-CDS-L-elsbetiae_contig11869:5244..5399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 5245..5399 +
1691682873.6793265-CDS-L-elsbetiae_contig11869:5244..53991691682873.6793265-CDS-L-elsbetiae_contig11869:5244..5399Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11869 5245..5399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11869.1600.1

>prot_L-elsbetiae_contig11869.1600.1 ID=prot_L-elsbetiae_contig11869.1600.1|Name=mRNA_L-elsbetiae_contig11869.1600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MVEVPDVTWADIGGLEDVKRELQEMIQYPVEYGPLWHKFGMSPSKGVLFY
GPPGCGKTLLAKAVANQCNANFISVKGPELLSMWFGESEANIRELFNKAR
AASPCILFFDEMDSIARGRGGSGGGGGGSDVGDRVINQILTEIDGVGPAK
MVFIIGATNRPDILDSSVTRPGHLDQLIYIPLPDHDSRLSILKANLRKSP
VSDDVDMQAMAEATDGFSGADLT
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mRNA from alignment at L-elsbetiae_contig11869:720..5399+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11869.1600.1 ID=mRNA_L-elsbetiae_contig11869.1600.1|Name=mRNA_L-elsbetiae_contig11869.1600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4680bp|location=Sequence derived from alignment at L-elsbetiae_contig11869:720..5399+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGCAACCCCTCTTCCCTGCGAGAGACGATGGTGGAGGTGCCTGACGT
CACGTGGGCGGACATCGGGGGTCTCGAGGACGTGAAGCGGGAGTTGCAAG
AGGTGAAGCGAAAAGTTGTTGTGTTTTTAACCGTTCCGATGTCTCCACCC
AGTACCTCCCTATGGGCGTACTTTTCCGACACTTGATGCGGTCAACTCCC
GTGGTCACAGGCTAACGCATACCTAAAAAAGGCATGGTATAAATGGACCC
GAAGGGAGCAAAGCGATAAAAATGAAAGATAATTAGTAACAAGGGTGAGG
TGAAGTAGTTGGGTGAGGTGAGGTGAAGTGAAGTGAAGGCCAAATCGATA
GATGCTGGCGGTGTGATCCCCCGCTTGCGAAAGGCTGTAACGAGTGGAAT
TATTTGTTTCCTGGTGCTTCGAGTCTATGTCAAATGTCACAATGACGCTC
GGCGGCGGTCGCAGGAGATGGAGAGGAAGAGATGCAGACTGGAGAGGTTT
TATAAAAGGTCCTGTCTGTTTTCGCCGTTCAACTCCAGCAAAGCGAGGGC
TGTGAAAAAAAATGCCGGGCGCGGTGGGCGACCGCTAAGAGCCATCAGCA
GCCTCCTGTGAGATATGCCACCGGTCACAAATTTTGTACGATGTGTACGA
AATATTCCAATACTCCATGCTCTACCGTAGAATAAATAAACCACCCCAAA
CAAACGAAAACAAATCTTAGGCAAGCACCGCAGAAGGTGGGAGTGGGGGC
CTTGGGAAAAGGAACCCTTCTGTGTGACCACGGTTCAGTACTCTGGCAAG
ATGGCCTCGTGGCAGGGGAACTCATCGAGCACTGGAAATAAATGACAAGC
CAATAAAATCACAGCGTAAGAAACGGCCTTAGTTTTATTTAAGTATTGAA
TTATTTGGTTTGGGGCAGGGAATATATGAAGAAAAAATAAAATAAAATAA
AATAAAGAAACAAACAAACAAACACCCGAACAATGGCTTGCGGATTTTGC
AGCACTAGTCGGAACCGGTGAAGGGGTATAAGCATGCTTCCAACAGTTGG
AGCCCCTTGGGGCGGCGTTTTTGACGGGTCGGACGAACCCAGACGACTGG
CATTCATTAAAAAACCTGAAAAAAAGTACTGGTGCTTGGTACATACCATG
CACAGGGCTTTTTCGGCTTTCGGCGCGCCAAGCTTGAAGCTTAGAACCTT
CTCGCTTGTTGACTTTCTATGGGCGGTCGCGGCATACCGTACGTGACACA
AGATGCCACCCCCCCCCTGGACCGTCTTTTAGAGCTCTGTTACTCCGAAA
CGAAGAGGGTGCCGGCGCCAAACGACAGATTTTCGGACAGCCCTGGAGTA
GATATTTCCAACGCCACCCCCTTCCGGCACTCTGTCACTCTTCTTGCTGG
GGAGGAATCGAGCTTAGAAAATATGTCCAGGGGGTGTGGTTTCTTGTGTC
ACTACACCAGTAAGTCCTCTTTATGTTGGTCTGTTGTTGCATGGCCGCAT
GTTCGGGGTGTGTCTCTCTCTTGTCCCAACCCTCACCTCCATTGCTCGTT
TGTTGCGTGCGGGCTCGATTGTCGCGATCCCAGATGATCCAATACCCCGT
CGAGTATGGCCCGCTGTGGCACAAGTTCGGCATGTCCCCTTCGAAGGGCG
TTCTTTTCTACGGGCCCCCTGGCTGCGGGAAGACTTTGCTAGCCAAGGCG
GTGGCGAACCAATGCAACGCCAACTTCATCTCCGTCAAAGGTGAGAACGG
CTCACATACGGTGGTGCTGCTGGTGTTCCACACTTAGTGTGAGAAACATA
AACAACTTAACCCTTTTAGTACTGGAAGCCCGTTTGGAGAAAAAATTGGT
GACACCTAAACTTTGCCCACTGTTCTCGACCTAGGCTTGCAATGATAGTC
TTTGGAACCCGTAGAATGGCCTGGGGGCACCCCACCGAGGGGTATGGACA
CTATACCTGCCCTACTTGCCCTGCACATCGCTCCATAGCAGTGCTGGAGA
CACAACTGAGTTGTTGCGGATATCTCAAAAATCTCGGGAATAAAACCGCC
GCGATTCGTACCTTACGCGGCGCCCCCGGCGGTTCAGCCATTTGAGCCGC
ACAACACACACACACCGCTTTGCTGTCACTCTTGAGAATCGCCGTGTGCT
GAGCTTAGAGCGGGTTGCGTCGCCCGCCACGCTCAATTGTGTGTTGTGAT
GGCTGCTTGGTGTGTTTACACACGCACAGCTCAGGGTTCACGTCATGTCT
CTACAGCAGAGAAGTCTGTATTGTCTAGTACGCTATACAGTTTATACTGC
GTTTCAGTATACTTTTTTTCTCCAAACGGTTTGGACAGTTTGACTTCGTT
TTGAATGCAACTTTTCTCCAAATGATGTCGGGGCTCCGCAGCTGCAAAAT
GGAGAGACTGTTGTTTCTCGGCCAATCAGTGGGCACCCAGAAGGCGCGAT
AACTTTTCGGCGTTAATTTTTTATTTCGGAGGGCTAGCATACTAAAAGGG
TTAGTGCTGAACGCTGAACGTAGTCAATGCGGTCAGCTTTGTTTTCCGAC
CTCAGGTGTTCGATTCCTTCCCAACCAAACCTCACCCCCCATTCTCATTC
CTGTTCTTACTCAAAACCGCGCCTGGCCGGCGATAACCCGGCGGTATCGT
CCCATGTTTCTGCGGTTGCAAGGATCTAACAAGCATCGTCTCTGCTACGG
CTGTGTGCCATATAGTGCGTTATTTCACCACCTGCTTGGGCATTCCTCTC
AAGTATTCGTTCGGGCGCCCTTCACGCGTGCTCCGTGTCGGTGTTGTTGT
TGCCGTTGTCCAAGAGATCGACGAGGTTTTTCACGGAGGTCACAGAGGTA
ATACTTTGAAAGCCTAGCGTTAGTTGACAGTCCCGTTGTCCTGTTGTTGT
TGTTATTGTTCGTTCGTCAGGGCCCGAGCTGCTGTCGATGTGGTTCGGAG
AGAGCGAGGCAAACATTCGCGAGCTTTTCAACAAAGCCCGGGCCGCGTCC
CCTTGCATCCTGTTCTTCGACGAGATGGATTCCATCGCCAGGGGCCGGGG
AGGTTCCGGCGGGGGTGGGGGTGGCAGTGATGTCGGGGACAGGTGAGAAT
GAGTGAAGGGGTGTCGTGCGGTTTGGGCTGAGTGTTCGGCGTACCTGTGG
TTACTTGCCGGTTTGCGTGGACCCCCCTGTTGCTGGTTTTTAGTTTTTAG
TGTGGTTGGTTTCTGCCTCAGGTTTGATCAGAAGGCGATGGACCGCCCTC
TCTGTGGTTGTCCCGTGGCCAACGATCTCATGGCCTCTGCCGCTGGTGCC
GTGTGTAGACACATATGTATGTACATAGTCCGCCTGCTGTCAAGGTGACC
ATCCATGTTATTTCTGCCCTGTACAACACAGGCTAGATGTGGATAGATCA
TAATGGGACCCTTTTTTTTCCTTATTGTGGTTCACCATGTCTGGGGAAAT
TATCAAATTATCTCAAGTTGTCATTTTTGTTTTGTTTTTTACGGAGGAAT
CAAACCACATTTTGATGGGATTGTCGTACAATAATGCATACATTTGTGTT
TTGTGTTTTGTTTTTTGTGTATCAAGAGTGATCAACCAGATTCTGACGGA
AATCGACGGCGTTGGTCCGGCCAAGATGGTGTTCATCATCGGGGCGACTA
ACCGCCCTGACATCCTAGACAGCTCCGTCACTCGCCCAGGTGAGTTCAGT
GCAGTCCTGGTCGCTTCCGGCTTTTGGAGTACCGTAGGTGACACAAGATA
CCACACCCCCTGAAGAGATTTTCAAAGCTCGATTCCTGCCCAGCAAGAAG
AGTGCCGGTGCCGAAAGGGGTAGCTTTGGAAATATCTAGTCGAGGGCTGT
CCTAAAATATGTCGTTTAAGTGCTGGCACCTTCTTCGTTACGGAGTAATG
AAGCTCTAAAATTTGGTCCAGGGGGTGCGGTATCTTGTGTCACCTACGGT
ACGTACGTGAGTAGTTTCTCACAAGGATGGATGGCTTTGAGGAGAGACCC
GGATTCATCCTTCGAGTCTGTCCACTCGCTCTCCTTGGGCCTCTTCTGGC
ACTCGGTCCATTCGCCTCTCTGTTGGTGTTCATTCTCACGGTTATAGTTT
GTGTTTTTTTCTGACAATGAGTTCTCTTTACGCAGCCGGCGTTTACGCCC
CGTGTTTTGTGAAACCGATTGTGTTGTGGAGTGAGGGGCCGCGGCTGAGT
GTTGTTAGGCAGGTCCCATGCGCTCTTCGCTTTTGCACGAATGTGTACCA
GATAGGATTACCCTCCCGGATCTATCACGCGCCAAGACGCGCCTGTGGTT
GACTCCCCGGTGTACGGAAGTCTATTATAATACTCGTGAGCTGCTAGTAC
CTGTAGTTTCCCGAAAACAAACGACCATGCCCGAACCGTGTCGCCAGCTG
ATTGTGTCGTCTTGTACATGCACATCATGCCCGCAGCTGGTTTTATTTTG
CCCAGAACACGCGTCTATCAAACCATGTCCTCCTTCATCCTTACCCCCGT
TCTCTCTCTCTCTCTCTCTCTCTAGGCCACCTTGACCAGCTCATCTACAT
ACCACTGCCGGATCACGACAGCAGGCTTTCGATTCTGAAGGCCAACCTGA
GGAAGTCGCCCGTCTCGGACGACGTGGACATGCAGGCCATGGCCGAGGCA
ACAGACGGCTTTTCGGGCGCTGATCTGACA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11869:720..5399+

>mRNA_L-elsbetiae_contig11869.1600.1 ID=mRNA_L-elsbetiae_contig11869.1600.1|Name=mRNA_L-elsbetiae_contig11869.1600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig11869:720..5399+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAGGTGCCTGACGTCACGTGGGCGGACATCGGGGGTCTCGAGGA
CGTGAAGCGGGAGTTGCAAGAGATGGTGGAGGTGCCTGACGTCACGTGGG
CGGACATCGGGGGTCTCGAGGACGTGAAGCGGGAGTTGCAAGAGATGATC
CAATACCCCGTCGAGTATGGCCCGCTGTGGCACAAGTTCGGCATGTCCCC
TTCGAAGGGCGTTCTTTTCTACGGGCCCCCTGGCTGCGGGAAGACTTTGC
TAGCCAAGGCGGTGGCGAACCAATGCAACGCCAACTTCATCTCCGTCAAA
GATGATCCAATACCCCGTCGAGTATGGCCCGCTGTGGCACAAGTTCGGCA
TGTCCCCTTCGAAGGGCGTTCTTTTCTACGGGCCCCCTGGCTGCGGGAAG
ACTTTGCTAGCCAAGGCGGTGGCGAACCAATGCAACGCCAACTTCATCTC
CGTCAAAGGGCCCGAGCTGCTGTCGATGTGGTTCGGAGAGAGCGAGGCAA
ACATTCGCGAGCTTTTCAACAAAGCCCGGGCCGCGTCCCCTTGCATCCTG
TTCTTCGACGAGATGGATTCCATCGCCAGGGGCCGGGGAGGTTCCGGCGG
GGGTGGGGGTGGCAGTGATGTCGGGGACAGGGCCCGAGCTGCTGTCGATG
TGGTTCGGAGAGAGCGAGGCAAACATTCGCGAGCTTTTCAACAAAGCCCG
GGCCGCGTCCCCTTGCATCCTGTTCTTCGACGAGATGGATTCCATCGCCA
GGGGCCGGGGAGGTTCCGGCGGGGGTGGGGGTGGCAGTGATGTCGGGGAC
AGAGTGATCAACCAGATTCTGACGGAAATCGACGGCGTTGGTCCGGCCAA
GATGGTGTTCATCATCGGGGCGACTAACCGCCCTGACATCCTAGACAGCT
CCGTCACTCGCCCAGAGTGATCAACCAGATTCTGACGGAAATCGACGGCG
TTGGTCCGGCCAAGATGGTGTTCATCATCGGGGCGACTAACCGCCCTGAC
ATCCTAGACAGCTCCGTCACTCGCCCAGGCCACCTTGACCAGCTCATCTA
CATACCACTGCCGGATCACGACAGCAGGCTTTCGATTCTGAAGGCCAACC
TGAGGAAGTCGCCCGTCTCGGACGACGTGGACATGCAGGCCATGGCCGAG
GCAACAGACGGCTTTTCGGGCGCTGATCTGACAGCCACCTTGACCAGCTC
ATCTACATACCACTGCCGGATCACGACAGCAGGCTTTCGATTCTGAAGGC
CAACCTGAGGAAGTCGCCCGTCTCGGACGACGTGGACATGCAGGCCATGG
CCGAGGCAACAGACGGCTTTTCGGGCGCTGATCTGACA
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