mRNA_L-elsbetiae_contig11714.1491.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11714.1491.1
Unique NamemRNA_L-elsbetiae_contig11714.1491.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: D8LJ70_ECTSI (Similar to chromatin modifying protein 2B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ70_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 4.490e-112
Identity = 192/213 (90.14%), Postives = 206/213 (96.71%), Query Frame = 1 
Query:    1 MFHRKKPDPKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAKGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAPTNAPA-VAKPSAAGETKLDAKTEELLAQLGAL 636
            MFH+KKPDPKAAAKDAKRAVRSGERD+DKEIR+L+RSEKSLVAEIKKTAKGGNQGATRTLAKQLVQ+RAQKDQLYSARA++AGVGNAA +AAT+ASLAGVMGNVAGVMKKVNE+VSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEE+ADGVV QV+AELGLEMDGKMVDAPTN PA VA+PS A + KLDAKTEELLAQLGAL
Sbjct:    1 MFHKKKPDPKAAAKDAKRAVRSGERDLDKEIRNLDRSEKSLVAEIKKTAKGGNQGATRTLAKQLVQLRAQKDQLYSARAKLAGVGNAATTAATSASLAGVMGNVAGVMKKVNEAVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEEADGVVGQVLAELGLEMDGKMVDAPTNTPAGVARPSEAEDAKLDAKTEELLAQLGAL 213
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A835YLS1_9STRA (Chromatin modifying protein-like protein 2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS1_9STRA)

HSP 1 Score: 191 bits (486), Expect = 8.310e-54
Identity = 110/208 (52.88%), Postives = 149/208 (71.63%), Query Frame = 1 
Query:   16 KPDPKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTA-KGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAPTNAPAVAKPSAAGETKLDAKTEELLAQLGAL 636
            KPDPK  A+ AKR VR GERD+++E+R+L+R EK L+ +IKKTA K G + ATR LA QLV +R Q+D+LY+ ++ I  VG    + A  A++AGVMG+V G MK VN  +S +E A ++QQFA+++E M M EE+MDDAL DAFDG+GVE + D +V+QV+ E+GL+M  KM DAPT  PA  +  A  ++ LD + EELL QL AL
Sbjct:    5 KPDPKEVARSAKRQVRQGERDVERELRNLDRVEKQLIIDIKKTARKPGGEKATRNLAGQLVGLRKQRDKLYTMKSTITAVGYQTTAIAGQAAMAGVMGSVTGAMKDVNAQLSPQEMAAVLQQFALQSETMGMREELMDDALTDAFDGDGVEAETDAIVDQVLTEIGLDMTSKMADAPTGKPAAGQQLAQDDSMLDQRAEELLKQLQAL 212
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A4D9D707_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D707_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.910e-38
Identity = 83/181 (45.86%), Postives = 124/181 (68.51%), Query Frame = 1 
Query:    1 MFHRKKPDPKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAKGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAP 543
            MF +KK  PK   ++ KR +R  ERD+D+E+++L R E  L+ +IKK A     G  + +AK LVQ+RAQKD+L + +  + GVG  A+   + A++   MG + GVM  +NE +   +T+K+M +FA +NE MN+ E+++DDAL+DAFDG+GVEE+A+ VVNQV+ E+GLE+  KM D P
Sbjct:    1 MFGQKKLTPKEQLRETKREIRHNERDMDRELQNLAREEAKLIHDIKKMAANNQHGPLKVMAKNLVQLRAQKDKLITMKTTMTGVGYKASLMHSQAAVGQAMGRMTGVMGDMNEMMDATKTSKVMTEFARQNEYMNVKEDLLDDALMDAFDGDGVEEEAESVVNQVLEEIGLELGSKMADVP 181
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A7S2EVL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVL5_TRICV)

HSP 1 Score: 144 bits (362), Expect = 6.710e-36
Identity = 100/221 (45.25%), Postives = 135/221 (61.09%), Query Frame = 1 
Query:    4 FHRKKPDPKAAAKDAKRA----VRSGERDIDKEIRSLERSEKSLVAEIKKTAKG----GNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMV--DAPTNAPAVAKPSAAGETKLDAKTEELLAQLGAL 636
            F  KKP    AAK AKR+    VR  +RD+D+EIR L+R+E  ++AEIKK AK     GN  A   LAKQLVQ+R QK++++S +A +  VG  A + A+  + A  +GNV   M   N S+      KIM +F  +NE M + EE+MDDAL DAFD + VEE+A+ V NQV+AELG+E+D KMV  DAP   P   + +A  +  L     +L A+L AL
Sbjct:    3 FWEKKPTAAEAAKAAKRSTKREVRGAQRDMDREIRELDRTEAQVLAEIKKRAKAPGVSGNDRALSALAKQLVQIRKQKEKMFSTKANLGAVGMQATAMASQVAAASAVGNVTKAMGTANASIDAAAVGKIMTEFQRQNEIMGVREELMDDALTDAFDADEVEEEAEAVTNQVLAELGVELDSKMVGLDAPKQKPVGEEMNAEEKEALYDALPDLRARLDAL 223
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A7S1BMU4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMU4_9STRA)

HSP 1 Score: 135 bits (341), Expect = 5.350e-33
Identity = 86/217 (39.63%), Postives = 138/217 (63.59%), Query Frame = 1 
Query:    4 FHRKKPDPKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAKGG----NQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKM--VDAPTNAPAVAKPSAAGETKLDAKTEELLAQLGAL 636
            + + KP  K AA++ KR VRS +R ID+E+R LER E++L+A+IKK AK G    N  A + L+KQLV  R QKD+L  ++++I  +   A + ++  + A  +G V   M   N++V  ++ +  M +F  +NE M++ E++ +DAL DAFDG+ VEE+AD V +Q++AELGLE+ GKM  ++ P+ AP VA+     +  + +   +L ++L AL
Sbjct:    4 WRKPKPTAKEAARETKREVRSAQRGIDRELRELERQERTLLADIKKRAKTGGITKNDSALKALSKQLVHTRGQKDRLQESKSQIGSMALKATAMSSQVAAAQAVGKVTQAMGNANQAVDIKKLSAQMGEFMRQNEMMDLKEDLFNDALADAFDGDEVEEEADAVTDQILAELGLELSGKMEGLNVPSAAPPVAEEEVVEDDGISSNIPDLQSRLNAL 220
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A1Z5KR86_FISSO (Charged multivesicular body protein 2B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR86_FISSO)

HSP 1 Score: 134 bits (337), Expect = 1.730e-32
Identity = 93/215 (43.26%), Postives = 135/215 (62.79%), Query Frame = 1 
Query:   13 KKPDPKAAAKDAKRAVR----SGERDIDKEIRSLERSEKSLVAEIK---KTAKGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAPTNAPAVAKPSAAGETKLDAKTEELLAQLGAL 636
            KK  PK AAK+          S + D+D+EIR L+R EK++  E+K   KTA   N    + LAKQ+VQ+R Q+++L++A+A++  +G  A  AA+  +    MG++   MK  N+ +  ++T KIM +F  ENE++ + EEMMDD L+DAFD EG+EE+AD + NQV+AELG+E+D +MV    NAPA  K  A  E  LD    +L A+L AL
Sbjct:    5 KKETPKEAAKNXXXXXXXXXXSNQXDLDREIRELDRQEKTITVELKQRAKTASSANDPTLKALAKQMVQVRQQRNKLHTAKAQVGAMGMHATVAASQIAAVTAMGSITESMKVANKQMDIKKTTKIMAEFQRENERIQVKEEMMDDVLMDAFDSEGMEEEADQLTNQVLAELGVELDQQMVG--LNAPAK-KLQAEEEEVLDEVLPDLKARLDAL 216
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A7S2VFB0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFB0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.190e-30
Identity = 85/186 (45.70%), Postives = 118/186 (63.44%), Query Frame = 1 
Query:   13 KKPDPKAAAKDAKRAVRSGERD----IDKEIRSLERSEKSLVAEIKKTAKGGNQGAT---RTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMV--DAP 543
            KK  PK AA  AKR            +D+EIR L+R EK +  E+K+ AKG N  +    +TLAKQLVQ+R Q+ +L  A+A++  +G  A   A+  +    +G+V   MK  N+ ++ +ET KIM +F  ENE++ +  EMMDD L+DAFD EG+EE+AD V NQV+AELG+EMD +MV  DAP
Sbjct:    5 KKETPKEAAMKAKREXXXXXXXXXXXMDREIRELDRQEKQITMELKQRAKGANSSSDPTLKTLAKQLVQVRQQRSKLVGAKAQLGAMGMHAQVTASQVAAVQAVGSVTDAMKVANKQLNVKETTKIMTEFQRENERLAVKSEMMDDVLMDAFDSEGMEEEADQVTNQVLAELGVEMDQQMVGLDAP 190
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A024UK03_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK03_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.880e-29
Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:    1 MFHRKKPD--PKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAKGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAPT 546
            MF   KP+  P+  AK+AKR +   +R++++E  +LER EK L+A+IKK AK GN G T+ LAKQL+Q+R QKD++   ++ +  +G    S A   ++   +      M   ++ +      K++  F  ++E M M EEM+DD LIDAFD E VE + D VV+QV+ E+GL++   M DAPT
Sbjct:    1 MFGFGKPEKTPRERAKEAKRGIAQSQRELEREKMALERQEKQLIADIKKAAKEGNTGGTKILAKQLIQLRQQKDKMTMLKSNLGSIGLQTTSMAAQMTMVAAIEKTTKTMASTSKQMDMNRFQKVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLGSLMADAPT 184
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: A0A067D5G0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D5G0_SAPPC)

HSP 1 Score: 125 bits (314), Expect = 2.250e-29
Identity = 79/185 (42.70%), Postives = 116/185 (62.70%), Query Frame = 1 
Query:    1 MFHRKKPDPKAA---AKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAKGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAPT 546
            MF   K  PK A   A++AKR +  G+RD+++E   LER EK L+ +IKK AK GNQ  T+ LAKQLVQ+RAQK++L   +  + G+G  A++ A   ++   M      M   N+ +      K + +F  ++E M+M +EMM+D LIDAFD + VEED   VV+QV+AE+GL++  ++ DAPT
Sbjct:    1 MFGFGKAPPKTAREQAREAKREIAHGQRDLEREKMVLERQEKQLILDIKKAAKDGNQAGTKILAKQLVQVRAQKEKLMVMKVSLGGIGMQASAMAAQQTMVATMEKTTKTMVAANKQMDMSRIQKTLMEFEKQSELMSMGQEMMEDTLIDAFDDDEVEEDL--VVDQVLAEIGLDLHTQLADAPT 183
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BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Match: W4H7G6_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7G6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.990e-29
Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 1 
Query:    1 MFHRKKPD--PKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAKGGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGVMGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFDGEGVEEDADGVVNQVMAELGLEMDGKMVDAPT 546
            MF   KP+  P+  AK+AKR +   +R++++E  +LER EK L+A+IK+ AK GN G T+ LAKQL+Q+R QKD++   ++ +  +G    S A   ++   M      M   N+ +      +++  F  ++E M M EEM+DD LIDAFD E VE + D VV+QV+ E+GL++   M DAPT
Sbjct:    1 MFGFGKPEKTPREQAKEAKRGISQSQRELEREKMALERQEKLLIADIKRAAKEGNNGGTKILAKQLIQLRQQKDKMTMMKSNLGSIGLQTTSMAAQMTMVSAMEKSTKTMAATNKQMDMNRFQQVIMDFEKQSEMMGMREEMLDDTLIDAFDDEEVEAEGDAVVDQVLTEIGLDLASLMADAPT 184
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11714.1491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ70_ECTSI4.490e-11290.14Similar to chromatin modifying protein 2B n=2 Tax=... [more]
A0A835YLS1_9STRA8.310e-5452.88Chromatin modifying protein-like protein 2B n=1 Ta... [more]
A0A4D9D707_9STRA1.910e-3845.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2EVL5_TRICV6.710e-3645.25Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1BMU4_9STRA5.350e-3339.63Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1Z5KR86_FISSO1.730e-3243.26Charged multivesicular body protein 2B n=2 Tax=Fis... [more]
A0A7S2VFB0_9STRA3.190e-3045.70Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A024UK03_9STRA1.880e-2940.22Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A067D5G0_SAPPC2.250e-2942.70Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W4H7G6_9STRA4.990e-2940.22Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11714contigL-elsbetiae_contig11714:96..5324 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.2
Seed ortholog evalue2.7e-93
Seed eggNOG ortholog2880.D8LJ70
Preferred nameCHMP2B
KEGG koko:K12192
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000815,GO:0000819,GO:0000920,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005829,GO:0006810,GO:0006914,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0010564,GO:0010824,GO:0012505,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019058,GO:0019068,GO:0019725,GO:0019904,GO:0022402,GO:0022411,GO:0022607,GO:0031090,GO:0031410,GO:0031982,GO:0032501,GO:0032509,GO:0032510,GO:0032886,GO:0032984,GO:0032991,GO:0033043,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040017,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044248,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046605,GO:0046755,GO:0046907,GO:0048284,GO:0048285,GO:0048518,GO:0048524,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050877,GO:0050890,GO:0051128,GO:0051179,GO:0051234,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0060236,GO:0060249,GO:0061024,GO:0061025,GO:0061763,GO:0061919,GO:0065007,GO:0065008,GO:0070050,GO:0070507,GO:0070925,GO:0071840,GO:0071985,GO:0090169,GO:0090174,GO:0090224,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:1901673,GO:1902115,GO:1902186,GO:1902188,GO:1903047,GO:1903900,GO:1903902,GO:1904896,GO:1904903
EggNOG free text desc.vacuolar transport
EggNOG OGsCOG5491@1,KOG3231@2759
COG Functional cat.N
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Ec32 ortholog descriptionSnf7 family protein
Ec32 orthologEc-02_004980.1
Exons5
Model size1779
Cds size639
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11714.1491.1prot_L-elsbetiae_contig11714.1491.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11714 1236..5324 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815373.8391972-UTR-L-elsbetiae_contig11714:95..12351622815373.8391972-UTR-L-elsbetiae_contig11714:95..1235Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11714 96..1235 -
1691682867.3582857-UTR-L-elsbetiae_contig11714:95..12351691682867.3582857-UTR-L-elsbetiae_contig11714:95..1235Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11714 96..1235 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815373.855425-CDS-L-elsbetiae_contig11714:1235..14301622815373.855425-CDS-L-elsbetiae_contig11714:1235..1430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 1236..1430 -
1691682867.3715734-CDS-L-elsbetiae_contig11714:1235..14301691682867.3715734-CDS-L-elsbetiae_contig11714:1235..1430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 1236..1430 -
1622815373.867115-CDS-L-elsbetiae_contig11714:1816..19771622815373.867115-CDS-L-elsbetiae_contig11714:1816..1977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 1817..1977 -
1691682867.3799026-CDS-L-elsbetiae_contig11714:1816..19771691682867.3799026-CDS-L-elsbetiae_contig11714:1816..1977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 1817..1977 -
1622815373.8802814-CDS-L-elsbetiae_contig11714:2516..26371622815373.8802814-CDS-L-elsbetiae_contig11714:2516..2637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 2517..2637 -
1691682867.3879693-CDS-L-elsbetiae_contig11714:2516..26371691682867.3879693-CDS-L-elsbetiae_contig11714:2516..2637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 2517..2637 -
1622815373.8909993-CDS-L-elsbetiae_contig11714:4549..46801622815373.8909993-CDS-L-elsbetiae_contig11714:4549..4680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 4550..4680 -
1691682867.3960164-CDS-L-elsbetiae_contig11714:4549..46801691682867.3960164-CDS-L-elsbetiae_contig11714:4549..4680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 4550..4680 -
1622815373.9019175-CDS-L-elsbetiae_contig11714:5293..53241622815373.9019175-CDS-L-elsbetiae_contig11714:5293..5324Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 5294..5324 -
1691682867.406706-CDS-L-elsbetiae_contig11714:5293..53241691682867.406706-CDS-L-elsbetiae_contig11714:5293..5324Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11714 5294..5324 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11714.1491.1

>prot_L-elsbetiae_contig11714.1491.1 ID=prot_L-elsbetiae_contig11714.1491.1|Name=mRNA_L-elsbetiae_contig11714.1491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=213bp
MFHRKKPDPKAAAKDAKRAVRSGERDIDKEIRSLERSEKSLVAEIKKTAK
GGNQGATRTLAKQLVQMRAQKDQLYSARARIAGVGNAAASAATTASLAGV
MGNVAGVMKKVNESVSTEETAKIMQQFAVENEKMNMSEEMMDDALIDAFD
GEGVEEDADGVVNQVMAELGLEMDGKMVDAPTNAPAVAKPSAAGETKLDA
KTEELLAQLGAL*
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mRNA from alignment at L-elsbetiae_contig11714:96..5324-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11714.1491.1 ID=mRNA_L-elsbetiae_contig11714.1491.1|Name=mRNA_L-elsbetiae_contig11714.1491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5229bp|location=Sequence derived from alignment at L-elsbetiae_contig11714:96..5324- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTTCATAGGAAGAAGCCTGATCCCAAAGGTATGTTGTCCTTACACCT
CTCCCAACCCTCGAATATTTGTAGTGTAATGTTTGTGCTTTGCGGGCAAG
CAGCAGCGCAAGGAAAGTTCTCTATAATAGCTGTGACAATAGAGTAGACT
AATTTGCCTCTCTCGCTCTCCTCGCTCTCTGCCGCCACGTGCCTTGCGCT
TTGTGTCAAGTGTTGGCTCATAGCGCCGTTACAAAAGTTGTTATTCTTGT
AACATCACCAAAAAAAGCGAGTTCGTTAGTCGGAACGAATGAGTCGCCGC
ACCTTCATGTAGACTTCATAGTCATGCTATTTAGGCTCAAGGACTACATA
GATCTACGTAGTCCTCCCGCTGGACGCACCGGCCGTATGTGTCTCACGAC
TTCACCCTCACTTGTACGTCAGAGAGGGCACCGACCATCCATGCCCCTTC
CGTGATTGTGCCAAGAGTAGAGCAGAGCAGAGCCCCCTAAACAGCATGCC
GTCGGTCCGATCCCTCCCTCTCTCTCGCGCGCGTCTACTGCTGTGCATTC
CCCCCCACGTCTTGTTGCCCATGGGTCGTGACGACTCCTGCACGATACCC
GCAACAATAATATCGCACACGCGTTTTCCTAATGACGTCATCAGCTGCGG
CCAAAGATGCGAAACGGGCTGTCCGTTCAGGAGAGCGAGACATAGACAAG
GAGATACGGAGCCTGGAGAGAAGCGAGAAATCTCTGGTGGCGGAGATCAA
GAAGACCGCGAAGGGCGGGAACCAGGTAACGCCCGTTTGAGTTGTCTGTC
GCCTCCTTCTCAGAGGTTTGTGTTTTATTTTCGAAGTACAGCGGGACTGG
CTCTCATTCTTTGGGACCTGGGCAAAACCGGCAAAAAAAAACAGGAACTA
CATACATAAATATATGGTAAATAGAAGTAGTGTGTGTTGTGTGTTTTCGT
CCCATTTTTTCGGGCGCCTGCCACACGTTTCGGTGTGTTTACAACATGCA
CGTTGCGGTGCTGTTTCTTTGTACAGCATGAGGGCGTGTCTCAGGGCGCG
TCTTAACGTTAGAAATGTCAGCCAGTTTGGAAAGCGAATTGGAATCGAAT
TTGCTTGTGATTGGTCAAGCCCAAAAATACATCCACGGGGCTTGGTGGGT
GCTAGTATTTCCATCCCACGGAGCTAGCTTTTGGCGCACCCAAAATCAAT
CCTCCGGAGGGGTGACTTTTCGCAGTCGCTCGAACGAATTGGATTGACCC
ACGAACCGTACATGTGGGTCCCCGTGCTGGCGCGTTTTCCCGTTTCCACG
CTTCCATACCGATCGCCTGGTACCAGCGGTTCGGGGATAGCTGTATTGTG
ACAGGCCTGTGCGCGTGTAAAAAAAAACAGGCTCTCTATTTTGTGCACGG
CTGCTGTTTTCGAAAAAATGATGCCAACGCGGTGTTGTTGCATCTCGACA
ACCCAAAGATCAGTTCTAGCTGATATTTGAGGATGAGGTTTGGACCATGA
GGACCTCTTATTCAGACTTAACCTTATGACTACATGTGATATTTTTCTAG
CTACCCTGTGGCACATGAGCTTCCTTTGAACTTTCAGTCAACCGGTTACA
TCGGCGGCCCCCAGGGGATATCCGCGGTAGTCGATTTCGCTCCCTGCCCG
GGGGCACTGATTGTTTAGATTCGAGCCCCGAATTCGATTCCAATTCGCTT
TCCAAATTGGCTGACATTGCTAACGTTAAGACCCGCCCTGATGTATTCGC
CGGGGTCACACAGGAGGGGGTAAACACTGGACCTTTTCCTTAATTTTATA
TATTTTTTTGCCCCCCACCTTCCTTCTGCGGTGCTTTGCCTTGGGTTTTT
ATCGCGAGAAGGGTACAGCTTATCCCTTCCCTCGTCAACGTTTGAGTCGA
AGTTTGTTAACTCACGAACTTTTCAGCTTTATTCGCTTTCATCTGCAAAT
TTGCAAATGTTTCATCCCAGAGGGATTCGAACTCACGACCTTTGCTACTA
GCAGATCTCGAGGTTACCTACTAGACTGCCGGGGCGACCGGTTATGTACA
TACCTAATTACAACGAATGCTCGATTTCAATAGGGGTCTGGATCCTTTGA
ACGACTGCTGTGGGTGCGCGTCTCCTGGCCACGCCTTTGTGCTTTGTACC
TTTACTGTGCTTGGAGAGAACCTGAAGGCGTCGAAGAGTCCGACCCTTGA
ATACAGGGCTCGACCTCTCCTAGGACATGCAGACCTTGCAGCCAGTCTCG
CCTAGCGCCTATAAACCCTTACAGCGACCAATAGTCTGGCCCTTCATCGA
CGGCCAAGCGCCTATAAACTCTTACAGCAACCAATAGTCCAGCCCTTGAC
CGACGGCCCTTTACCGACGGCAGGTGGAATGGTAAGTAGCCCAAAGGGAC
GCAATGCTTCCCGGGGGTCACGGTTGCCGAAAAAAAGGTAGCTATTGATG
GAGCGAGCACACCGCCTCGCTGCAGTGGAAACGTGGAAACGGCAGTACCG
CAGAGTCCCTCAACACGACAGCGGTGGCAAAGCAAGCTCCTCAAACAAAT
CGCCTCGAAAGGAGTGGTGGGGTGCGTCTTCCATGAGGGGAAGCATTCCC
GACGACGTGCAGCTGTGACGTGCCCCGCTTCACGCTTCACGCCCGCGGCT
TCCTTCCTTGTTCCGCCTTCTTCCTTCCCCCGACCAGGGCGCAACAAGAA
CACTCGCGAAGCAGCTGGTGCAGATGCGAGCACAAAAAGACCAGCTGTAT
TCGGCGAGGGCTAGGATAGCGGGAGTCGGGAACGCGGCAGCGTCCGCGGC
GACAACAGGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGGAGTATAAATA
CTCCATTCCAACTACTGCTTACTGCTGTAGTAGACGCTGCGTTCTGGTGC
GCAACCATAATGCTCCGTACGTGTGCTTTCCGGCGAATGACACGTGATGA
GTCGGTCATGCGGTAATCTTTACAAGACACAAGGAGAGGACCTCATGTCT
CGTTGCTTCGGGAGCAGCGTCCGTCCTGGCTCTGAAAGGGGGGGCTGTCG
CTTCACTTCACCCCCACAGGATACCAGCAAAGACTCGTCATCGCCTTTTG
ATTCCGCAAATCTGCGTAGATCAGATCAGCATCTAGAAATATAACACCTC
AAGAAACAAGGGGAGATGGGCGAAAGCGACACACTTTTCCAGTGACTTCG
TGCGCAGCTCTTGAGTTTGCACAGACGCCGGGTGGCAGGGGAGGGCAGTT
CACATGGCGGGAAGTCCCGACCCTCGCCATGTTTTGCTCAGTTTTCGCGT
TTTACCTAGCTGATTGAGCTTCTGCTGTACCCACGAATCCTGCACAGCGT
CGCTCGCTGGAGTTATGGGCAACGTTGCGGGGGTGATGAAGAAGGTGAAC
GAGTCGGTTAGCACGGAGGAGACGGCGAAGATCATGCAGCAGTTCGCCGT
GGAGAACGAGAAGATGAACATGTCGGAGGAGATGATGGATGACGCGCTGA
TCGACGCGGTGAGAGCGAGAGGCGGAACCTTGTCATTCCAAGGAACATTG
TTGCGATTGCTTCAAATTTCACACTCATGTCCGCCACCACGTGTGGTACC
AATTTGTATACTATTTGCCGTCAAAGGAAGGGGGGAAGGGAGTACTCGTG
CAATGTCGCTCTGCGGCTCAAACACACGCATGTCGTATCTCACTTCGCGT
AGACACACATACCCACATTCCTCTTGGATTTGATTTGAGAAAAACCTGGC
TTGTGTCATGTTTTTTCACAACACCTCTCCCCTTGGTCGGCAATGAAAGA
AAATGAGAATCCACGCGCATTCTAAGAAGCTGACCCCCGCCTGATGAAAT
TCCTCCCCTCCCCTCCCCTCCCCTCCCCTTCTCTTCTCTTCCAGTTCGAC
GGCGAAGGGGTGGAAGAAGACGCAGACGGCGTCGTGAACCAGGTGATGGC
CGAGCTCGGCTTGGAAATGGACGGGAAGATGGTGGACGCCCCAACCAACG
CTCCCGCCGTTGCGAAACCTTCCGCAGCGGGGGAGACCAAGTTAGATGCC
AAGACGGAGGAGTTGTTAGCGCAGCTGGGTGCCCTTTGATGATTATTTTC
ACGAAATAGTTTGTGTGGGGGGTGGTGCTGGAGCCAGACCAGGTGCTGGT
CCAGTAAGCAGCACGGAATGTTGCGACTCTCTCTCACTCCGTCAATCCCG
GGCAGGAAATCGGGATACTGCTTGTGTTGATGGTATCGACCCAAGCGTGT
GTCGGGGCATCGCTCGCAACGCACGTCCGTTCGCGACGACTGATGGGAGA
GGCTGCTGCGGCAGGTGTTTTCGTTGGCGTTGGAAACGGAAACGACCCTT
TGGTGTCCTGTTCTGCTGTTTTTGTGTCGGTATTTAGCTCCGCCGATGAC
TTGGTGAGATGAAGGGTTCAGGACAAATGGGAACTACAGCACACAAAGCT
GTCGAAAAAATGTCCGGATGCTGCTCTTCAGCATTGCCCAAGGTTAACAC
TTACTGTCGTACACCTTACAGTATTGTGCAGTATTCTGCACGGGAGTTTG
CGTGTTTACCTGTTGTGGAAGTGCTACCTACTTAGACTTCTACTAGATAT
TACGTAAGAGTTGGCATGTTTGGGCTCATGTACACGTACATACGTGTCGG
GTGCACAATCGCAGGGCAAAAGGACTCTTTCTCTGACAACAGTAGTGGTG
TGGACTGACCCCCCTTTCGGTAGGTTGGGGTGTTTCGTCGGTTAGATGTA
AGGAGTGGCTGTCCCTTGGGTACGAAATTTCGGTAAGTGTGGTAAATTTG
CCAGGCTTTTCTTCTCTCCAGCGCGCACACACGTCGTATTTTTATTCCAC
CTCCCCGGCGTGTTAAGCTATATGATGTAGGTGCATAAGGTTAGATCATC
CAGCTTACAGGAAGACGGAATAAATGTGACCTGATACGCAGTTGTGCGTT
TTGTACATATACGAAGGAAAGCGTCGTCCACCAAGGGTCCATGACATACT
CATACATATGGCCGGTCGCCTCGGTAGTCTAGTTGGTATCCACGCAACCT
TCTGATGCACCAGGTCCCGGGTTCGAGCCCCAGCGAAGCGAGTTTTTGCT
CACATTCGTTCCTGGCAAAATTGAAAGCGATTTCGTGAGTAAATACTTCG
ACTTCATTGTTGACGAGGGTGGGGAGTGCTGAACCCTGCTCGCGATAAAA
ACACCCTAGGCAGGCACCGCAGGAGGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11714:96..5324-

>mRNA_L-elsbetiae_contig11714.1491.1 ID=mRNA_L-elsbetiae_contig11714.1491.1|Name=mRNA_L-elsbetiae_contig11714.1491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1278bp|location=Sequence derived from alignment at L-elsbetiae_contig11714:96..5324- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTTCATAGGAAGAAGCCTGATCCCAAAGATGTTTCATAGGAAGAAGC
CTGATCCCAAAGCTGCGGCCAAAGATGCGAAACGGGCTGTCCGTTCAGGA
GAGCGAGACATAGACAAGGAGATACGGAGCCTGGAGAGAAGCGAGAAATC
TCTGGTGGCGGAGATCAAGAAGACCGCGAAGGGCGGGAACCAGCTGCGGC
CAAAGATGCGAAACGGGCTGTCCGTTCAGGAGAGCGAGACATAGACAAGG
AGATACGGAGCCTGGAGAGAAGCGAGAAATCTCTGGTGGCGGAGATCAAG
AAGACCGCGAAGGGCGGGAACCAGGGCGCAACAAGAACACTCGCGAAGCA
GCTGGTGCAGATGCGAGCACAAAAAGACCAGCTGTATTCGGCGAGGGCTA
GGATAGCGGGAGTCGGGAACGCGGCAGCGTCCGCGGCGACAACAGGGCGC
AACAAGAACACTCGCGAAGCAGCTGGTGCAGATGCGAGCACAAAAAGACC
AGCTGTATTCGGCGAGGGCTAGGATAGCGGGAGTCGGGAACGCGGCAGCG
TCCGCGGCGACAACAGCGTCGCTCGCTGGAGTTATGGGCAACGTTGCGGG
GGTGATGAAGAAGGTGAACGAGTCGGTTAGCACGGAGGAGACGGCGAAGA
TCATGCAGCAGTTCGCCGTGGAGAACGAGAAGATGAACATGTCGGAGGAG
ATGATGGATGACGCGCTGATCGACGCGCGTCGCTCGCTGGAGTTATGGGC
AACGTTGCGGGGGTGATGAAGAAGGTGAACGAGTCGGTTAGCACGGAGGA
GACGGCGAAGATCATGCAGCAGTTCGCCGTGGAGAACGAGAAGATGAACA
TGTCGGAGGAGATGATGGATGACGCGCTGATCGACGCGTTCGACGGCGAA
GGGGTGGAAGAAGACGCAGACGGCGTCGTGAACCAGGTGATGGCCGAGCT
CGGCTTGGAAATGGACGGGAAGATGGTGGACGCCCCAACCAACGCTCCCG
CCGTTGCGAAACCTTCCGCAGCGGGGGAGACCAAGTTAGATGCCAAGACG
GAGGAGTTGTTAGCGCAGCTGGGTGCCCTTTGATTCGACGGCGAAGGGGT
GGAAGAAGACGCAGACGGCGTCGTGAACCAGGTGATGGCCGAGCTCGGCT
TGGAAATGGACGGGAAGATGGTGGACGCCCCAACCAACGCTCCCGCCGTT
GCGAAACCTTCCGCAGCGGGGGAGACCAAGTTAGATGCCAAGACGGAGGA
GTTGTTAGCGCAGCTGGGTGCCCTTTGA
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