mRNA_L-elsbetiae_contig11702.1480.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.170e-24 Identity = 46/62 (74.19%), Postives = 55/62 (88.71%), Query Frame = 1 Query: 1 RLVSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCDCRPR 186 RLV+TAHS G +F+ TGRAL+S++HHTDQTRSLDFS+DGSSLLT S+DGL+GVCDCRPR Sbjct: 968 RLVATAHSGGCIFLXXXXTGRALTSILHHTDQTRSLDFSQDGSSLLTGSFDGLIGVCDCRPR 1029
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A7S3PSD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSD3_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 5.810e-12 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 7 VSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCD 174 V+T H DG +WD+R G A+ + H D RS+DFS DG LLTAS+DG VG+ D Sbjct: 25 VATGHLDGSCTIWDIRKGSAMYCLNQHDDDVRSIDFSPDGRWLLTASFDGTVGIID 80
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A2J6KFZ1_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KFZ1_LACSA) HSP 1 Score: 57.4 bits (137), Expect = 5.250e-8 Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 1 RLVSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCDCRPREASG 198 + + + H DGH+ +WDM++G+ LS V H+ S+ SR+G+++LT+ D L + D R E G Sbjct: 415 QTICSGHMDGHLRLWDMKSGKLLSEVAAHSLAVTSISLSRNGNTVLTSGRDNLHNLFDTRTLEVMG 480
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: UPI0017476A96 (eukaryotic translation initiation factor 3 subunit I isoform X1 n=3 Tax=Hymenoptera TaxID=7399 RepID=UPI0017476A96) HSP 1 Score: 55.1 bits (131), Expect = 3.300e-7 Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1 Query: 7 VSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCD 174 + T H DG + +WD+RTG+ LSS+ H Q + F++DG+ +TAS D + D Sbjct: 182 IITGHEDGEIKLWDVRTGKKLSSIKGHKSQINDMQFNKDGTMFVTASKDHTAKLFD 237
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A2J6LV27_LACSA (ATG16 domain-containing protein n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LV27_LACSA) HSP 1 Score: 54.3 bits (129), Expect = 6.400e-7 Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 7 VSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCDCRPREASG 198 + + H DGHV +WD++TG+ LS V H+ S+ SR+G+ +LT+ D L + D R E G Sbjct: 368 IISGHVDGHVRLWDIKTGKVLSEVAAHSLAVTSVCVSRNGNMVLTSGKDNLHHLFDVRSLEVCG 431
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A6S7MW75_LACSI (Uncharacterized protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7MW75_LACSI) HSP 1 Score: 54.3 bits (129), Expect = 6.510e-7 Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 7 VSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCDCRPREASG 198 + + H DGHV +WD++TG+ LS V H+ S+ SR+G+ +LT+ D L + D R E G Sbjct: 766 IISGHVDGHVRLWDIKTGKVLSEVAAHSLAVTSVCVSRNGNMVLTSGRDNLHHLFDVRSLEVCG 829
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A6V7I5G5_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7I5G5_9HYME) HSP 1 Score: 53.1 bits (126), Expect = 1.220e-6 Identity = 22/56 (39.29%), Postives = 33/56 (58.93%), Query Frame = 1 Query: 7 VSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGLVGVCD 174 + T H DG + +WD+RTG+ L+S H Q + FS+DG+ +TAS D + D Sbjct: 78 IITGHEDGEINIWDVRTGKILTSQKGHKSQINDMQFSKDGTMFITASKDHTAKLFD 133
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A087TLX3_STEMI (WD repeat-containing protein 5 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TLX3_STEMI) HSP 1 Score: 49.3 bits (116), Expect = 8.240e-6 Identity = 19/45 (42.22%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 25 DGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGL 159 D V +WD++TG+ L ++ H+D ++ F+RDGS ++++SYDGL Sbjct: 34 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 78
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A418FBG3_9STRA (WD40 repeat-containing protein SMU1 (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FBG3_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 2.270e-5 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 1 Query: 4 LVSTAHSDGHVFMWDMRTGRALSSVVH-HTDQTRSLDFSRDGSSLLTASYDGLV 162 L++TA ++G V +W + TG+ L H H+ S+ FS+DGS LLTAS+D V Sbjct: 7 LLATATAEGKVKVWKLATGQCLRRFEHAHSHSIHSICFSKDGSQLLTASFDQFV 60
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Match: A0A6G4ZUI1_RHIMP (Putative wd40 domain protein (Fragment) n=2 Tax=Arthropoda TaxID=6656 RepID=A0A6G4ZUI1_RHIMP) HSP 1 Score: 49.3 bits (116), Expect = 2.300e-5 Identity = 19/45 (42.22%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 25 DGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYDGL 159 D V +WD++TG+ L ++ H+D ++ F+RDGS ++++SYDGL Sbjct: 11 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 55 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11702.1480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11702.1480.1 >prot_L-elsbetiae_contig11702.1480.1 ID=prot_L-elsbetiae_contig11702.1480.1|Name=mRNA_L-elsbetiae_contig11702.1480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp RLVSTAHSDGHVFMWDMRTGRALSSVVHHTDQTRSLDFSRDGSSLLTASYback to top mRNA from alignment at L-elsbetiae_contig11702:5581..5778- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11702.1480.1 ID=mRNA_L-elsbetiae_contig11702.1480.1|Name=mRNA_L-elsbetiae_contig11702.1480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=198bp|location=Sequence derived from alignment at L-elsbetiae_contig11702:5581..5778- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11702:5581..5778- >mRNA_L-elsbetiae_contig11702.1480.1 ID=mRNA_L-elsbetiae_contig11702.1480.1|Name=mRNA_L-elsbetiae_contig11702.1480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=396bp|location=Sequence derived from alignment at L-elsbetiae_contig11702:5581..5778- (Laminarionema elsbetiae ELsaHSoW15)back to top |