mRNA_L-elsbetiae_contig1169.1465.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1169.1465.1
Unique NamemRNA_L-elsbetiae_contig1169.1465.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A6H5KAF1_9PHAE (14_3_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAF1_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.990e-139
Identity = 206/226 (91.15%), Postives = 216/226 (95.58%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADADEGADNKPSD 678
            MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGE DKLKLIGEYK KIEKELETICGDILTIID+NLLPNSQ+NE KVF+YKMQGDY RYLTEFQQG+AR GSA+KALQAYQSATTLTNQDM PTHPIRLGLALNFSVFY+EILNSPERACSLAK+AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPA+   DEGAD+K +D
Sbjct:   24 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEADKLKLIGEYKAKIEKELETICGDILTIIDENLLPNSQTNEAKVFFYKMQGDYHRYLTEFQQGEAREGSAEKALQAYQSATTLTNQDMAPTHPIRLGLALNFSVFYFEILNSPERACSLAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPAE---DEGADSKATD 246          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A835YSI6_9STRA (14-3-3-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI6_9STRA)

HSP 1 Score: 330 bits (845), Expect = 7.980e-112
Identity = 170/220 (77.27%), Postives = 191/220 (86.82%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPAD---ADAD 651
            MV  MK V+V+P+ELS+EERNLLSVAYKNVIG+RRASWRVISSIEQKGEP+KL LI +YK KIE ELE IC +IL II++ L+PNS + E KVFYYKM+GDY RYL+EFQ  DAR  S+DKAL+AYQ AT  ++QD+PPTHPIRLGLALNFSVFYYEILNSPERAC+LAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+    D   ADAD
Sbjct:   22 MVSFMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGEPEKLPLIRDYKKKIETELEEICTEILGIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSDKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDEAGADAD 241          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: B8BX06_THAPS (14-3-3-like protein n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8BX06_THAPS)

HSP 1 Score: 327 bits (839), Expect = 6.090e-111
Identity = 166/225 (73.78%), Postives = 191/225 (84.89%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADADEGADNKPS 675
            MV +MK VA +P+EL++EERNLLSVAYKNVIGSRRASWRV++SIEQKG+ DK+ +I +YK KIE EL  IC DIL+II+++L+PNS S E KVFYYKM+GDY RYL+EFQQGD R  SA  AL AYQSAT + + D+PPTHPIRLGLALNFSVFYYEILNSP+RAC +AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+ A   ADA+ G    PS
Sbjct:   22 MVSDMKEVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDADKMSIIKDYKAKIENELCDICNDILSIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQQGDVRKASASAALDAYQSATEVASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQA---ADAEAGEPEAPS 243          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A7S3IA22_9CILI (Hypothetical protein n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3IA22_9CILI)

HSP 1 Score: 324 bits (830), Expect = 1.940e-109
Identity = 164/216 (75.93%), Postives = 182/216 (84.26%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADA 648
            MVE+MKAVA +P+ELS+EERNLLSVAYKNVIGSRRASWRV+SSIE KGE DKL+LI +YK KIE+EL  IC DIL II D L+P S S E KVFYYKMQGDY RYL EFQ G+ R  S+  AL AY+SA+ + N D+PPTHPIRLGLALNFSVF+YEI+NSP+RAC LAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSE    D  A
Sbjct:   40 MVEHMKAVAQQPQELSVEERNLLSVAYKNVIGSRRASWRVLSSIESKGEADKLQLIQDYKNKIERELVDICADILKIITDELIPRSTSEEGKVFYYKMQGDYHRYLAEFQSGEDRKTSSSSALSAYESASGIANSDLPPTHPIRLGLALNFSVFFYEIMNSPDRACQLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEQEQTDEGA 255          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A7S1GIM8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIM8_CYCTE)

HSP 1 Score: 323 bits (829), Expect = 2.240e-109
Identity = 162/219 (73.97%), Postives = 189/219 (86.30%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADADEG 657
            MV +MK VA +P+EL++EERNLLSVAYKNVIGSRRASWRV++SIEQKGEPDK+ +I +YK KIE EL  IC DIL IID++L+PNS S E KVFYYKM+GDY RYL+EFQ GDAR  SA  AL AYQ+A+ + + D+PPTHPIRLGLALNFSVFYYEILNSP++AC +AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+     A+AD+G
Sbjct:   27 MVTDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGEPDKMTIIKDYKAKIESELVEICNDILGIIDESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQIGDARKSSASSALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDQACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQT---AEADDG 242          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A1E7FAR9_9STRA (14-3-3 protein n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FAR9_9STRA)

HSP 1 Score: 322 bits (826), Expect = 5.210e-109
Identity = 162/223 (72.65%), Postives = 193/223 (86.55%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPAD-ADADEGADN 666
            MV++MK VA +P+EL++EERNLLSVAYKNVIGSRRASWRV++SIEQKG+ DK+++I +YK+KIE EL  IC DIL II+++L+PNS S E KVFYYKM+GDY RYL+EFQ GD R  SA  AL AYQ+A+ +   D+PPTHPIRLGLALNFSVFYYEILN+P++ACS+AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ A AD AD +E  DN
Sbjct:   22 MVQDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDSDKMEIIKDYKSKIECELVEICNDILGIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQTGDTRKESAGAALDAYQAASGIAQSDLPPTHPIRLGLALNFSVFYYEILNAPDKACSIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQADADGADKEEVVDN 244          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A1Z5JP80_FISSO (14-3-3 protein epsilon n=4 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JP80_FISSO)

HSP 1 Score: 322 bits (824), Expect = 1.050e-108
Identity = 158/213 (74.18%), Postives = 185/213 (86.85%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPAD 639
            MV +MK VA +P+EL++EERNLLSVAYKNVIGSRRASWRV++SIEQKG+PDK+ +I +YK KIE EL  IC DIL+II+D+L+PNS S E KVFYYKM+GDY RYL+EFQ GD R  SA  AL AYQ+A+ + + D+PPTHPIRLGLALNFSVFYYEILNSP++AC +AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ A  D
Sbjct:   22 MVSDMKDVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDPDKMTIIKDYKAKIETELVEICNDILSIIEDSLIPNSTSEEAKVFYYKMKGDYHRYLSEFQVGDTRKESASAALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAEGD 234          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A6U5FWF4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FWF4_9STRA)

HSP 1 Score: 318 bits (815), Expect = 2.820e-107
Identity = 159/220 (72.27%), Postives = 189/220 (85.91%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADADEGA 660
            MV +MK VA +P+EL++EERNLLSVAYKNVIGSRRASWRV++SIEQKG+P+++++I +YK KIE EL  IC DIL II+++L+ NS S E KVFYYKM+GDY RYL+EFQQG+ R  SA  AL AYQ+A+ + + D+PPTHPIRLGLALNFSVFYYEILNSP+RAC +AKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+ A  +  A EGA
Sbjct:   22 MVNDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGDPERMEIIKDYKAKIEDELVGICNDILGIIEESLIVNSTSEEAKVFYYKMKGDYHRYLSEFQQGETRKASASAALDAYQAASGVASADLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDHAADNEPAAEGA 241          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A7S1H1R2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1R2_9STRA)

HSP 1 Score: 318 bits (816), Expect = 3.210e-107
Identity = 159/218 (72.94%), Postives = 187/218 (85.78%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADADE 654
            MV +MK VA +P+EL++EERNLLSVAYKNVIG+RRASWRV++SIEQKGEPDKL  I +YK KIE EL  IC DIL+II+++L+ NS S E KVFYYKM+GDY RYL+EFQ GD+R  SA  AL AYQ+A+ + + D+PPTHPIRLGLALNFSVFYYEILNSP++AC++AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ A    DA E
Sbjct:   39 MVTDMKEVARQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKGEPDKLPTIKDYKAKIENELVDICNDILSIIEESLIRNSTSEEAKVFYYKMKGDYHRYLSEFQAGDSRKESATSALDAYQAASRIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACNIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAADAGDAPE 256          
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Match: A0A7S1CZ22_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ22_CYCTE)

HSP 1 Score: 318 bits (814), Expect = 3.870e-107
Identity = 157/216 (72.69%), Postives = 187/216 (86.57%), Query Frame = 1
Query:    1 MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEPDKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQGDYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALNFSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEDAPADADA 648
            MV +MK VA +P+EL++EERNLLSVAYKNVIG+RRASWRV++SIEQK E DK+ +I +YKTKIE+EL  IC DIL II+++L+PNS S E KVFY+KM+GDY RYL+EFQ GDAR  SA  AL AY++A+ + + D+PPTHPIRLGLALNFSVFYYEILNSP+RACS+AKQAFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTS+ A    +A
Sbjct:   23 MVSDMKEVAKQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKAEQDKIPVIKDYKTKIERELIEICNDILGIIEESLIPNSTSEEAKVFYFKMKGDYHRYLSEFQVGDARKASASSALDAYRAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACSIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAAEGGEA 238          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1169.1465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAF1_9PHAE1.990e-13991.1514_3_3 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YSI6_9STRA7.980e-11277.2714-3-3-like protein n=2 Tax=Tribonema minus TaxID=... [more]
B8BX06_THAPS6.090e-11173.7814-3-3-like protein n=3 Tax=Thalassiosirales TaxID... [more]
A0A7S3IA22_9CILI1.940e-10975.93Hypothetical protein n=1 Tax=Fabrea salina TaxID=3... [more]
A0A7S1GIM8_CYCTE2.240e-10973.97Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1E7FAR9_9STRA5.210e-10972.6514-3-3 protein n=3 Tax=Bacillariaceae TaxID=33852 ... [more]
A0A1Z5JP80_FISSO1.050e-10874.1814-3-3 protein epsilon n=4 Tax=Bacillariophycidae ... [more]
A0A6U5FWF4_9STRA2.820e-10772.27Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1H1R2_9STRA3.210e-10772.94Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A7S1CZ22_CYCTE3.870e-10772.69Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1169contigL-elsbetiae_contig1169:23540..27713 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.9
Seed ortholog evalue1e-112
Seed eggNOG ortholog2880.D7G305
KEGG koko:K06630
KEGG Pathwayko04011,ko04110,ko04114,ko04151,ko04390,ko04391,ko04722,ko05169,ko05203,map04011,map04110,map04114,map04151,map04390,map04391,map04722,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0031410,GO:0031982,GO:0042470,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0048770,GO:0097708
EggNOG free text desc.protein domain specific binding
EggNOG OGsCOG5040@1,KOG0841@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400,ko04147
Ec32 ortholog description14-3-3 domain
Ec32 orthologEc-09_004190.1
Exons4
Model size711
Cds size711
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1169.1465.1prot_L-elsbetiae_contig1169.1465.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1169 23540..27713 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815371.166156-CDS-L-elsbetiae_contig1169:23539..236861622815371.166156-CDS-L-elsbetiae_contig1169:23539..23686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 23540..23686 +
1691682866.1452827-CDS-L-elsbetiae_contig1169:23539..236861691682866.1452827-CDS-L-elsbetiae_contig1169:23539..23686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 23540..23686 +
1622815371.1817305-CDS-L-elsbetiae_contig1169:24518..246471622815371.1817305-CDS-L-elsbetiae_contig1169:24518..24647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 24519..24647 +
1691682866.15661-CDS-L-elsbetiae_contig1169:24518..246471691682866.15661-CDS-L-elsbetiae_contig1169:24518..24647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 24519..24647 +
1622815371.1944225-CDS-L-elsbetiae_contig1169:26055..262921622815371.1944225-CDS-L-elsbetiae_contig1169:26055..26292Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 26056..26292 +
1691682866.1672478-CDS-L-elsbetiae_contig1169:26055..262921691682866.1672478-CDS-L-elsbetiae_contig1169:26055..26292Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 26056..26292 +
1622815371.2101028-CDS-L-elsbetiae_contig1169:27515..277131622815371.2101028-CDS-L-elsbetiae_contig1169:27515..27713Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 27516..27713 +
1691682866.1763313-CDS-L-elsbetiae_contig1169:27515..277131691682866.1763313-CDS-L-elsbetiae_contig1169:27515..27713Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1169 27516..27713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1169.1465.1

>prot_L-elsbetiae_contig1169.1465.1 ID=prot_L-elsbetiae_contig1169.1465.1|Name=mRNA_L-elsbetiae_contig1169.1465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MVENMKAVAVRPEELSMEERNLLSVAYKNVIGSRRASWRVISSIEQKGEP
DKLKLIGEYKTKIEKELETICGDILTIIDDNLLPNSQSNEPKVFYYKMQG
DYQRYLTEFQQGDARAGSADKALQAYQSATTLTNQDMPPTHPIRLGLALN
FSVFYYEILNSPERACSLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRD
NLTLWTSEDAPADADADEGADNKPSDDAAGGAGEKL*
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mRNA from alignment at L-elsbetiae_contig1169:23540..27713+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1169.1465.1 ID=mRNA_L-elsbetiae_contig1169.1465.1|Name=mRNA_L-elsbetiae_contig1169.1465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4174bp|location=Sequence derived from alignment at L-elsbetiae_contig1169:23540..27713+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAGAACATGAAGGCGGTGGCGGTGCGACCTGAGGAGCTGTCCAT GGAGGAGCGCAATCTCCTGTCCGTGGCATACAAGAACGTCATCGGGTCGC GCAGGGCGTCGTGGAGGGTGATCAGCTCCATTGAGCAAAAGGGAGAGGTA TGTATGTATGTATGTGTGTGTGCGGGTGGGAGTTTTGCGCGGAAACCTGC TCACGTGTTTTTGTCGTTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTATTGCTGCTATTGCTGCTGCTGCTGTTGTTGTTGTTGAGGTATGTA AGTGGGAGTTTTGTGCGGAACCTGCTCACGTGTTTTTGTCGTTGTTGCTG CTGCTGCTGCTGCTGCTGCTGTTGTTGTTGAGTTATGTAAGGGGAGTTTT GTGCGGAACCTGCTCTCGTGTGTTTGTCGCTGTTGCTGCTATTGCTGCTG CTGCTGTTGTTGAGGTATGTAAGTGGGAGTTTTGTGCGGAACCTGCTCTC GTGTGTTTGTCGCTGTTGCTGCTATTGCTGCTGCTGCTGCTGTTGTTGTT GTTGAGGTATGTAAGTGGGAGTTTTGTGCGGAACCTGCTCTCGTGTTTTT GTCGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGGCTGCTGTT AGTAGTGGTGGTATGGTCTACTGGTGAAGTTGCTACTTTTTTGTTGGGCT TTCATCGTGCGATAAGATCCCCCTTTTTTGTTGTGTATGTATTCCGGAAC GCGCTGCTGGTAGCCTGATGCTTTTGAACGCGGCGGGGCACCGGCCGATG CGTTTGTGTCGGGGGGGGGGGGCGCCCCGTTCTCATCGCTTGAGAACGGT CGTCTGTACTCTCGTGTTTTCCAACTCCCGCGTGCCACTGAACCGTGACG TCGTATCGTTCTCGTCTCCGCCGCCGCAGCCGGACAAGCTCAAGTTGATC GGCGAGTACAAGACCAAGATCGAGAAGGAACTGGAGACCATTTGCGGGGA CATCCTGACGATTATCGACGACAACCTTCTTCCCAACAGCCAAAGCAACG AGCCCAAGGTGTGCGATTTATGCTAGTATTTATCATTGGCAGGTTTTACT GTAGAACATCATGTGGGATAAAGTATGGAGACGGCTAATGGGGGGTCGGT TTGGGGCTAGGGTTGGGTTAGGGTTAAGGTTACGGAACCCCTGTCTATTA TGGGAAAACGACGCAACAGGGTATATACCCTGGCAGAACCACGACATAGC TAGGGTTGGGTTAGGGTTGAATTACGGAACCCCTGTTTATTATTTCCTGT TTAGACAGGAACTCTTCGCGAAGGGCGGTCCTTGTATTCTCGCGAGCTCT CGTTTTTTTTTTTCTCTTTTTTCCCCCCCATTTACATTGGAAGCGGAACG CCCGCGCACGCTCTCTCTAAGCCTCCAAGCACCGTGTGCCTGACTCGTGC TCATCCCTAGCAGCAGCTCGTATCCGAGTTTTTCCTGCATCTCGCCAGTT TTGAACGCATGTATATATTTACCGCAGAACGCCACCTCTTGTATGCGAGG TTTATGGCGCTTCGCGGCCCCGCCCAACCGGGCGGATCCCAAGGCAAACA TGCGTCTGCGGTGTTGGTGTGGGTGTGTGCTGAAAAGCAAGCCATGTATG TACCGGGCTCTGTATAGAGCGGAATGGACTTGTGGCTATTAGCGCTGCCG CGCGCCTGCTGCGCTTGCGCATCGCGGCTGCGGGCGTTTGAATTACGTGG GTGTTTCAGAACACCTGCTGTCAGCAGGGCCGCTCCGCCAGCGACCCCAT CAGCTTGCACCAGGAAGAGTAGTGCACGTTTTGAACACGCCCTCACGAGT CGGCGCTCATGAAAGTTGCTCTCGTCCTTGGCGCTGCCACGCGCGCGCAC ACACACGGTTGGGTCGTCTAGTTCGTCGTAGTGGAGTATGGGGGCCAGTG GAGCAGACGACGAATATGCCAACAATGGAAACACAAGCGTGACCCCTACT GCTGTGCAGGGCCACACAACGGACGGTGCACGCCACGAGCGAACATTTTT GCCGCACCCTGCTCAATATTCTGGTCGTGCTGAGTGCTGTGCTCACAAAG AGATACAAGACGAAAGAGAGGGGGGGGGGAGAGGGAGAGAGACAGCAGAC TGACCCGTTGTGCGGGCGGTGCCTTGCCGATGGAGTGGTCGGAGCACGGG GAAACAGACACCTCGAGAGAACAAACACACATACCGCACGGAGAAGCCGC AGCCGCACTCCGGCAATTCTGTTTATATTTAGCGGAAAGACAAACATGAT AAAAAAAAAACACACACACACACACACATTGCCTGGGATGTACATACATG TCAAGGTGTACATGCTGGCTGCTGTTGGATGGATACAGATATATATATAA TATATTATAATTCTCCATGAATATGTGCATAAACCCTCTACATACATGCA TGCATACCCTTGCCAGGTGTTCTACTACAAGATGCAAGGCGACTACCAGC GCTATCTCACCGAGTTCCAGCAGGGGGACGCGCGCGCGGGCTCCGCGGAC AAGGCGCTGCAGGCCTACCAGAGCGCCACGACCCTCACAAACCAGGACAT GCCTCCGACGCACCCTATTCGCCTGGGCCTTGCCCTCAACTTCAGCGTCT TCTACTACGAGATCTTGAACTCGCCGGAGCGCGCGTGCAGCCTCGCGAAG CAGGTGTGTGTGTGTGTTTGTGTGTTTTTCTTCCCATTATTACATACAAC ATACATTGGCATATTTGTCGTCTGCTCCACTGGCCCCCTTCCTCCACTAC CACTAGCTAGACGACCCAACCGGGGTCACACAGGAGGGGGGGTTGGACCG TGTGTGCATGATGTGTATGCACCCCTCTTTTTTTTTATATGCCAATCGTC AGCAGTTGGTGGCGTACCTGGTTGTAGTCCAACAGGTGAAAATATATTTC CAGAAGGACTGCTGTTTGGACACACTACTTAGCAACCAGCCCTCTCTCGC CCCCCCCCCTGACCTAACACATTCGTAGCATTTTCTGGATTTTGTTCCGT GCTTCTTTTTTTTTTTGGGGGGGGGGGCATGATTGCTCATTGTTTTGGAT GTTGCGGTGTGTGGGCGGATGGATGCTATGCTCTCGTGTCTTAAAGTATA GCGCCCACCGAAGCGCCCAAACGTGAACTCCAAGGGGCTGCCGTTGTTGG CTCCTCTTTCCGCTGGACGTTTAGCTACGTAGCTTACTTGAGGCCAAGAC CGTGAGTGGGTTCCTATTTACTATATGTAGGTACGTGTGATGTAGGCTTC CTGCAATAATGCCCCCAGTTCTCAGAAAGGGCTGTGGGGGTTATTTATTT ATCTAGGGAATAGAGTGAAAGATCCCCCACAGTAAATAGTAGTCACTTTT TCAGATGTGACGTTTTGGCGCCCCCTTGAGAAACCGTTCAAAACCCCTTT TGGATATATACCGGCAGAGCAGCTGGCAGACAAACACCACGATAGCTCCC CCATCGCAGACTAAGACAACGACGTCTTCGATACATCCTGTAGCTAAGAT AACAGAGATGCTAAATGCCAAACTTCCGCTCGTAGATGACGCTTGTCCCC GAAATATCAGAGTGCCCAACGACATCGCCTGGTGAAAGAGAGAGAGAACA GGACTGTGAAAATGGGGAGAGAGAGCCAGCACAACGCGGGGCAACGGGTC TGTTGGAAAGGCTTTTTTCGCTGACGTCGTGCGAGGGGAAGTCGGGCGGT GCTGACGTGTGGTCGCTGAGAGAGGCAACGCTTGACATTCATACTGATTT GAGAAAAGGGAAAGTTACCCCGCTTCTCGCACGGCGGTCGGGCTGAGAGA GCGCTGCGCTCTCAGCGACTCAGAACTGAACATCCATATCCCATCGTGAT ATTAATTACCTCTTTATGTAATCTAGGCGTTCGACGATGCGATCGCGGAG CTCGACACGCTCTCCGAGGAGTCGTACAAGGACTCCACCCTCATCATGCA GCTCCTGCGCGACAACCTCACCCTCTGGACGTCGGAGGATGCGCCCGCCG ACGCCGATGCGGACGAGGGCGCGGACAACAAGCCTTCCGACGACGCAGCG GGCGGTGCCGGGGAGAAGCTGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1169:23540..27713+

>mRNA_L-elsbetiae_contig1169.1465.1 ID=mRNA_L-elsbetiae_contig1169.1465.1|Name=mRNA_L-elsbetiae_contig1169.1465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig1169:23540..27713+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAGAACATGAAGGCGGTGGCGGTGCGACCTGAGGAGCTGTCCAT
GGAGGAGCGCAATCTCCTGTCCGTGGCATACAAGAACGTCATCGGGTCGC
GCAGGGCGTCGTGGAGGGTGATCAGCTCCATTGAGCAAAAGGGAGAGATG
GTGGAGAACATGAAGGCGGTGGCGGTGCGACCTGAGGAGCTGTCCATGGA
GGAGCGCAATCTCCTGTCCGTGGCATACAAGAACGTCATCGGGTCGCGCA
GGGCGTCGTGGAGGGTGATCAGCTCCATTGAGCAAAAGGGAGAGCCGGAC
AAGCTCAAGTTGATCGGCGAGTACAAGACCAAGATCGAGAAGGAACTGGA
GACCATTTGCGGGGACATCCTGACGATTATCGACGACAACCTTCTTCCCA
ACAGCCAAAGCAACGAGCCCAAGCCGGACAAGCTCAAGTTGATCGGCGAG
TACAAGACCAAGATCGAGAAGGAACTGGAGACCATTTGCGGGGACATCCT
GACGATTATCGACGACAACCTTCTTCCCAACAGCCAAAGCAACGAGCCCA
AGGTGTTCTACTACAAGATGCAAGGCGACTACCAGCGCTATCTCACCGAG
TTCCAGCAGGGGGACGCGCGCGCGGGCTCCGCGGACAAGGCGCTGCAGGC
CTACCAGAGCGCCACGACCCTCACAAACCAGGACATGCCTCCGACGCACC
CTATTCGCCTGGGCCTTGCCCTCAACTTCAGCGTCTTCTACTACGAGATC
TTGAACTCGCCGGAGCGCGCGTGCAGCCTCGCGAAGCAGGTGTTCTACTA
CAAGATGCAAGGCGACTACCAGCGCTATCTCACCGAGTTCCAGCAGGGGG
ACGCGCGCGCGGGCTCCGCGGACAAGGCGCTGCAGGCCTACCAGAGCGCC
ACGACCCTCACAAACCAGGACATGCCTCCGACGCACCCTATTCGCCTGGG
CCTTGCCCTCAACTTCAGCGTCTTCTACTACGAGATCTTGAACTCGCCGG
AGCGCGCGTGCAGCCTCGCGAAGCAGGCGTTCGACGATGCGATCGCGGAG
CTCGACACGCTCTCCGAGGAGTCGTACAAGGACTCCACCCTCATCATGCA
GCTCCTGCGCGACAACCTCACCCTCTGGACGTCGGAGGATGCGCCCGCCG
ACGCCGATGCGGACGAGGGCGCGGACAACAAGCCTTCCGACGACGCAGCG
GGCGGTGCCGGGGAGAAGCTGTAAGCGTTCGACGATGCGATCGCGGAGCT
CGACACGCTCTCCGAGGAGTCGTACAAGGACTCCACCCTCATCATGCAGC
TCCTGCGCGACAACCTCACCCTCTGGACGTCGGAGGATGCGCCCGCCGAC
GCCGATGCGGACGAGGGCGCGGACAACAAGCCTTCCGACGACGCAGCGGG
CGGTGCCGGGGAGAAGCTGTAA
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