mRNA_L-elsbetiae_contig11678.1454.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: D7FHD3_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD3_ECTSI) HSP 1 Score: 296 bits (757), Expect = 1.510e-97 Identity = 139/196 (70.92%), Postives = 161/196 (82.14%), Query Frame = 1 Query: 1 SSVQPFFARGTVEGHIFSAIWTRKPIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNARWNAPELY-DEEGYTEKIDIFSMGIIFWQLMALSSIPYEGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARLEEMV 585 +SVQPFFA GTVEG +F WT PI +P VLQMSLDAMRGLQVLHEAPGGPIIHNA+RPEQLL Y NGTVVVSDLNSCNFMG + SGE CP R D+ HNARWNAPE Y D +GYTE +DI+SM I+FWQL++L ++P+E +IP +V +QRPFV SWDP YAQLLQDMW+TDP+ RPS+RQVVARLEEM+ Sbjct: 163 ASVQPFFAGGTVEGLVFEGAWTGVPIEMPVVLQMSLDAMRGLQVLHEAPGGPIIHNAIRPEQLLRYANGTVVVSDLNSCNFMGVTPSGEACPTRSDISHNARWNAPEFYADGQGYTEMVDIYSMAIVFWQLVSLRTVPFESKHRRDIPDLVASHQRPFVDPSWDPHYAQLLQDMWRTDPEMRPSARQVVARLEEML 358
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: A0A6H5JFK2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK2_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.100e-42 Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 1 Query: 76 IGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNARWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPYEGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARLEEM 582 + + +++M+L A RG+Q LHE PGGP++H ++P QLL+ NG V V+DLN C FM SGEPCP N W +PE Y EG TEK+DI+S+G IFW ++ P+ ++ + G V +RP V+ SW P + QL DMW+ DP+ RP++R+VV RLE M Sbjct: 225 LSIGEIIRMALQAARGIQALHEMPGGPVVHADLQPRQLLLDDNGVVKVNDLNRCRFMARDSSGEPCPFYISK-GNGVWRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKP-PF--VRDDDYKGKVLRGERPKVNPSWHPEFVQLFTDMWKRDPRERPTAREVVLRLEAM 389
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: D8LHZ9_ECTSI (Serine/threonine-protein kinase pkn5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ9_ECTSI) HSP 1 Score: 151 bits (381), Expect = 1.520e-42 Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 70 KPIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNARWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPYEGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARLE 576 +P+ + TV+ M+LDA RGLQ LHEAPGG I+H M+P+QL+V G + ++DLN C+F A G CP W +PE E EK+DI+S+ ++F+ ++AL PY+G++ G +KD P SW P + +++DMWQ DP ARPS+R+VV RLE Sbjct: 41 QPLPILTVVSMALDAARGLQALHEAPGGAIVHFDMKPQQLMVDDQGRLKINDLNMCSFTDADADGNTCPYESTASRVGPWRSPENIAGENLNEKLDIYSLAMVFYSMLALHP-PYQGVRNAS--GNIKDGIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 206
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: D7G774_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G774_ECTSI) HSP 1 Score: 152 bits (383), Expect = 3.530e-42 Identity = 75/169 (44.38%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 76 IGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNARWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPYEGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARLEEM 582 + + +++M+L A RG+Q LHE PGGP++H ++P QLL+ NG V V+DLN C FM SGEPCP N W +PE Y EG TEK+DI+S+G IFW ++ P++ + + V +RP V SW P + QL DMW+ DP+ RP++R+VV RLE M Sbjct: 99 LSIGEIIRMALQAARGIQALHEMPGGPVVHADLQPRQLLLDENGVVKVNDLNRCRFMARDSSGEPCPFYISK-GNGVWRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKP-PFK--RDDKYKARVLRGERPKVDPSWHPEFVQLFTDMWKRDPRERPNAREVVLRLEMM 263
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: A0A6H5J7B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B7_9PHAE) HSP 1 Score: 143 bits (360), Expect = 9.290e-37 Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 1 Query: 70 KPIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNARWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPYEGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARLE 576 +PI + TV+ M+LDA RGLQ LHEAPGG IIH M+P+QL+V G + ++DLN C+F G CP W +PE E EK+DI+S+ ++F+ ++AL PY L G + + P SW P + +++DMWQ DP ARPS+R+VV RLE Sbjct: 340 QPIPILTVVSMALDAARGLQALHEAPGGTIIHFDMKPQQLMVDDQGRLKINDLNMCSFPDTDADGNTCPYESSASRVGPWRSPENIAGEKLNEKLDIYSLAMVFYSMLALHP-PY--LNVPNATGNIMEGIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE 505
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: D8LI06_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI06_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.080e-35 Identity = 71/172 (41.28%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 70 KPIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNARWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPYEG---LQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARLE 576 KP+ + V+ M+LDA RGLQ LHEAPGG I+H+ ++P+QL++ G V ++DL+ C F A G CP + + +PE E +EKID++S+ + F+ ++AL PY+G + + G+ P V+ SWD + ++L DMWQ DPKARPS+R+VV RLE Sbjct: 95 KPLPIALVVSMALDAARGLQALHEAPGGAIVHSDIKPQQLMLDEYGRVKINDLSMCRFPPADVEGNTCPYPARACKSGPFRSPENIAGEPLSEKIDVYSLAMTFYTMLALKP-PYKGEPGARARILAGIP-----PSVNLSWDRDFVEILGDMWQRDPKARPSARRVVERLE 260
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: D7G3F2_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F2_ECTSI) HSP 1 Score: 116 bits (291), Expect = 4.300e-29 Identity = 64/169 (37.87%), Postives = 96/169 (56.80%), Query Frame = 1 Query: 76 IGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVL---HNARWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPYEGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARL 573 + + + MSLDA+RGLQ LHEA GGPI+H ++P QL+V +G + ++D N FM G+PCP + H + W +PE + TEKIDI+ MG++F Q++A + + Q KD+ P V +W SY +++QDM + RPS+R+V RL Sbjct: 42 LSISEAVNMSLDAVRGLQALHEAEGGPIVHFDVKPTQLMVTDSGGLKLNDFNVAWFMSQGPDGKPCPFNMEGKFRGHGSPWRSPEYLTRKPMTEKIDIYRMGLVFQQILAAAGVKMPVAQES------KDDV-PVVATTWHWSYYEIVQDMIAMEATQRPSAREVAWRL 203
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI) HSP 1 Score: 113 bits (283), Expect = 2.730e-27 Identity = 71/175 (40.57%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 73 PIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNA-----RWNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPY---EGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARL 573 P+ + V+ ++L A +GLQ LHE GG IH M+P+QLL+ +GT V++D N+ MG RS P A C V W PE Y + TEK DI+SMG+IF+ ++A + PY E LQT V +P V SW + ++++ MW DP+ RPS+RQVV RL Sbjct: 94 PMPIRQVVSLALGAAKGLQALHEIVGG--IHFDMKPQQLLIDDDGTAVINDFNALKLMG--RSPGPDEAFCAVHGGTPAQLITWRPPENYAGKPLTEKADIYSMGMIFYSVIAGRN-PYDTPEALQT-----AVSHGSKPEVDPSWHRGFMEVVEQMWLDDPERRPSARQVVTRL 258
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: A0A6H5KBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB3_9PHAE) HSP 1 Score: 113 bits (282), Expect = 9.730e-27 Identity = 55/69 (79.71%), Postives = 58/69 (84.06%), Query Frame = 1 Query: 1 SSVQPFFARGTVEGHIFSAIWTRKPIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNG 207 +SVQPFFA GTVEG IF WT PI +P VLQMSLDAMRGLQVLHEAPGGPIIHNA+RPEQLL Y NG Sbjct: 226 ASVQPFFAGGTVEGLIFEGAWTGVPIEMPVVLQMSLDAMRGLQVLHEAPGGPIIHNAIRPEQLLRYANG 294
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Match: A0A6H5LAH0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH0_9PHAE) HSP 1 Score: 112 bits (279), Expect = 7.320e-26 Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 73 PIGLPTVLQMSLDAMRGLQVLHEAPGGPIIHNAMRPEQLLVYGNGTVVVSDLNSCNFMGASRSGEPCPARCDVLHNAR-----WNAPELYDEEGYTEKIDIFSMGIIFWQLMALSSIPY---EGLQTHEIPGVVKDNQRPFVHDSWDPSYAQLLQDMWQTDPKARPSSRQVVARL 573 P+ + V+ ++L A +GLQ LHE GG IH M+P+QLL+ +GT VV+D N+ MG RS P C V W PE Y + TEK DI+SMG+IF+ L+A + PY E L+T V +P V SW Y ++++ MW DP+ RPS+RQVV RL Sbjct: 208 PMPIRQVVSLALGAAKGLQALHEIVGG--IHFDMKPQQLLIDDDGTAVVNDFNALKLMG--RSPGPDEEFCAVHGGTPAQLIPWRPPENYAGKPLTEKADIYSMGMIFYSLIAGRN-PYDTPEALKT-----AVSHGSKPEVDPSWHRGYMEVVERMWLDDPERRPSARQVVVRL 372 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11678.1454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11678.1454.1 >prot_L-elsbetiae_contig11678.1454.1 ID=prot_L-elsbetiae_contig11678.1454.1|Name=mRNA_L-elsbetiae_contig11678.1454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp SSVQPFFARGTVEGHIFSAIWTRKPIGLPTVLQMSLDAMRGLQVLHEAPGback to top mRNA from alignment at L-elsbetiae_contig11678:3866..6074- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11678.1454.1 ID=mRNA_L-elsbetiae_contig11678.1454.1|Name=mRNA_L-elsbetiae_contig11678.1454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2209bp|location=Sequence derived from alignment at L-elsbetiae_contig11678:3866..6074- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11678:3866..6074- >mRNA_L-elsbetiae_contig11678.1454.1 ID=mRNA_L-elsbetiae_contig11678.1454.1|Name=mRNA_L-elsbetiae_contig11678.1454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1182bp|location=Sequence derived from alignment at L-elsbetiae_contig11678:3866..6074- (Laminarionema elsbetiae ELsaHSoW15)back to top |