mRNA_L-elsbetiae_contig1163.1414.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1163.1414.1
Unique NamemRNA_L-elsbetiae_contig1163.1414.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1163.1414.1 vs. uniprot
Match: A0A6H5KAS4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAS4_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 7.950e-109
Identity = 163/192 (84.90%), Postives = 175/192 (91.15%), Query Frame = 1 
Query:    1 MVSATFGEKINTDRIVLDKTAREAIEERYPEASAKCPTFLDEVGHGETRTFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLT----TYPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVELVYAIED 564
            MVSATFGEKINTDRIV+DKTAREA++E YPEA AK P FLDE+GHGETRTFTEE+LRKRLEVAHVFV+LANLVLLSRGKN+L+EDFKYYSPGTGRLDRD FLRLTKTLDVAFSTFRV PT+   YKDG VTYRRTFRA HDGYLT    TYPPSQTKVISDVDLCAVSFDD GV+RSYA GLMVE+V+AIED
Sbjct:   75 MVSATFGEKINTDRIVIDKTAREAVQELYPEACAKHPRFLDEIGHGETRTFTEEELRKRLEVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVVPTELVVYKDGTVTYRRTFRAVHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDMGVVRSYADGLMVEVVHAIED 266
[Close]
BLAST of mRNA_L-elsbetiae_contig1163.1414.1 vs. uniprot
Match: A0A835ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLQ1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 9.970e-34
Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:  109 PTFLDEVGHGET-RTFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTT----YPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVELVYAIED 564
            P +     HG    +  EE L++RL VA  F  +A L+LL RG+NI+++DF Y+SP TG L+++ FL L +T D AF +   +P  FT YKDG+V+YR  +R   DG LT       P+    ISDV+LC VSFD+ G++RSYA G++V+     +D
Sbjct:  110 PAYTATATHGSAPASLDEESLKRRLMVAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKD 266
[Close]
BLAST of mRNA_L-elsbetiae_contig1163.1414.1 vs. uniprot
Match: W7U8S2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8S2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.180e-10
Identity = 49/150 (32.67%), Postives = 70/150 (46.67%), Query Frame = 1 
Query:  106 CPTFLDEVGHGETRTFTEEQLRKRLEVAHVFVNLANLVLLSRGKNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTT----YPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVE 543
             P FL  +      T T   L +    A  F N+A  +++SRG N+LSEDF YYS  TG LDR  +L L   ++ A    R   + F    DG V Y         G L      +  S  K     ++C V+F++ G ++S + GL+VE
Sbjct:   86 APGFLSAIRPNSKSTDTGRALIR----AKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVE 231
[Close]
BLAST of mRNA_L-elsbetiae_contig1163.1414.1 vs. uniprot
Match: A0A4D9DH59_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DH59_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.940e-8
Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 1 
Query:  205 LANLVLLSRGKNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTT----YPPSQTKVISDVDLCAVSFDDTGVIRSYAYGLMVE 543
            +A  +++SRG N+LSEDF YYS  TG LDR  +L L   ++ A    R   + F    DG V Y         G L      +  S  K     ++C V+F++ G ++S + GL+VE
Sbjct:    1 MAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGQDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVE 117
[Close]
BLAST of mRNA_L-elsbetiae_contig1163.1414.1 vs. uniprot
Match: A0A7S2SCC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.980e-6
Identity = 40/140 (28.57%), Postives = 64/140 (45.71%), Query Frame = 1 
Query:  184 VAHVFVNLANLVLLSRGKNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTF----------RVYPTDFTAYKDGVVTYRRTFRAEHDGYLTTYP-------------PSQTKVISDVDLCAVSFDDTGVIRSYAYGL 534
            +A  +  L+ +V+ +RG N+LS+DF ++SP TG L++D+FLRL   L      F          RV+PT       GVVT     +    G ++ +              P +  ++   +  AV+FDD G +     GL
Sbjct:  106 MARTWAMLSPIVITARGPNVLSDDFVFFSPSTGLLEKDKFLRLNARLATLCPDFFNKLERDGEERVHPT-------GVVTLNYQPKGSFQGAVSEWSWLAKGSEAADHQAPVKKPLLGHWEAMAVAFDDQGRVLRLVSGL 238
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1163.1414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAS4_9PHAE7.950e-10984.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLQ1_9STRA9.970e-3443.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U8S2_9STRA1.180e-1032.67Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DH59_9STRA1.940e-834.19Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SCC1_9STRA6.980e-628.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1163contigL-elsbetiae_contig1163:95..5441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-16_004050.1
Exons6
Model size564
Cds size564
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1163.1414.1prot_L-elsbetiae_contig1163.1414.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1163 95..5441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815366.5835497-CDS-L-elsbetiae_contig1163:94..2231622815366.5835497-CDS-L-elsbetiae_contig1163:94..223Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 95..223 -
1691682863.526966-CDS-L-elsbetiae_contig1163:94..2231691682863.526966-CDS-L-elsbetiae_contig1163:94..223Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 95..223 -
1622815366.5966632-CDS-L-elsbetiae_contig1163:1235..13011622815366.5966632-CDS-L-elsbetiae_contig1163:1235..1301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 1236..1301 -
1691682863.538739-CDS-L-elsbetiae_contig1163:1235..13011691682863.538739-CDS-L-elsbetiae_contig1163:1235..1301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 1236..1301 -
1622815366.607613-CDS-L-elsbetiae_contig1163:2463..25331622815366.607613-CDS-L-elsbetiae_contig1163:2463..2533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 2464..2533 -
1691682863.555802-CDS-L-elsbetiae_contig1163:2463..25331691682863.555802-CDS-L-elsbetiae_contig1163:2463..2533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 2464..2533 -
1622815366.6177466-CDS-L-elsbetiae_contig1163:2940..30561622815366.6177466-CDS-L-elsbetiae_contig1163:2940..3056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 2941..3056 -
1691682863.5671213-CDS-L-elsbetiae_contig1163:2940..30561691682863.5671213-CDS-L-elsbetiae_contig1163:2940..3056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 2941..3056 -
1622815366.6284816-CDS-L-elsbetiae_contig1163:4046..41081622815366.6284816-CDS-L-elsbetiae_contig1163:4046..4108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 4047..4108 -
1691682863.578495-CDS-L-elsbetiae_contig1163:4046..41081691682863.578495-CDS-L-elsbetiae_contig1163:4046..4108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 4047..4108 -
1622815366.639862-CDS-L-elsbetiae_contig1163:5320..54411622815366.639862-CDS-L-elsbetiae_contig1163:5320..5441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 5321..5441 -
1691682863.5892234-CDS-L-elsbetiae_contig1163:5320..54411691682863.5892234-CDS-L-elsbetiae_contig1163:5320..5441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1163 5321..5441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1163.1414.1

>prot_L-elsbetiae_contig1163.1414.1 ID=prot_L-elsbetiae_contig1163.1414.1|Name=mRNA_L-elsbetiae_contig1163.1414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MVSATFGEKINTDRIVLDKTAREAIEERYPEASAKCPTFLDEVGHGETRT
FTEEQLRKRLEVAHVFVNLANLVLLSRGKNILSEDFKYYSPGTGRLDRDR
FLRLTKTLDVAFSTFRVYPTDFTAYKDGVVTYRRTFRAEHDGYLTTYPPS
QTKVISDVDLCAVSFDDTGVIRSYAYGLMVELVYAIED
back to top

mRNA from alignment at L-elsbetiae_contig1163:95..5441-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1163.1414.1 ID=mRNA_L-elsbetiae_contig1163.1414.1|Name=mRNA_L-elsbetiae_contig1163.1414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5347bp|location=Sequence derived from alignment at L-elsbetiae_contig1163:95..5441- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGTCGGCGACCTTCGGCGAGAAGATTAACACGGACCGGATCGTGTT
GGATAAGACGGCGAGGGAGGCTATCGAGGAAAGATACCCGGAGGCTTCCG
CCAAGTGTCCCACGTTTCTTGGTGAGGGAAATTTGATTTTGAGTTCGGGA
GTGCGGTGTGTTCATGTGTCGAAGTTGCGCTTGATACTGCAGTTCAACCG
CGGGCAGCCTCCGTAGACAGCGCTTTTGGTTATCTGTGGATATCTATATG
GCACCGAAGAGAATGGTGACACTGGTGCATTTGCGATTAGTTGTGGCTTG
TGTTCGATTTGGTGTCCGTACGAAGCGAACACGCGTTTCATGTGTGCTGT
GCTAATTTTGTTCCCAGCAACATATTCAGATTCATTCTCACTAATAAAAA
GTGGTCCTTGCTTGCAAGTACTAGATGCTTGTCTACAATTTCGGTGCTGC
ACGTCCCCTCCTTGGGCGATTGACCAATTTCTAGATACTTTTGACACAAC
CGAGGATGGTCATTTGGTGCATGTATTCCTTTGTGATGCATGCGTTGGCG
TCGCTTTCGTGTACATCTATCTATCTATATCTGATGTGCACCACCGCAAC
GACACACCAGATGCACATCGTTGGAATCGAAAAGGCCGCATTACATACCG
CAGGTGACACAAGATACCACACCCCCTGCTGGACATATTTTCAAAGCTCG
ATTCCTCCCCCAGCAAGAAGAGTGACAGTGCCGGAAGCGGTGGCGTTGGA
CATATAAAGATCTAGTCGAGGGCTGTCCGAAAGTGTGTCGTTTGGTGCTG
ACGCCCTCTTCGTTACGAAGTACCATATACATTTTTTTTTTTTTCTGCCC
ATTATTGGATTTTGTCGTCTGCCCCTCTGGCCCCCATCCTCCACTTCTAC
TCTAGCCATACGACCCAACCGGGGTCACACATATACATGTATGTAATTGA
GCTCTAAGAGTCGCTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTGC
ACATGCACAAAATAGTCCGTCTGGTCTAGCTAGAATAGCGCAGCGTGGCA
TCGGGAGCAATCACGCACATTACGTGAGAAGGAAGTATCACAAAATTGTT
CATCTGGTCTAGCTAGAATAGCACAGCGTGGCATCGGGAGCAATCACGCA
CATAAACGTTAGAAGGAAGTATCATGATCCCCGACCAAATTTCAAAAGGG
AGCCTGTGCTCCCCCGTTGGACTGGTTTTTGTGGAACGACCCATACGGTT
CTTCTTCCTCTTCGTCTCCCTCGTTGCGTGGTAACCGTACGTTATGTTCC
GATGTTTGCGTGCGTATGTCACTGTTTTGGCAGACGAGGTCGGGCACGGG
GAGACAAGGACATTCACCGAAGAGCAGCTCAGGAAGCGACTCGAGGTGAT
GCGCGCCTCTGCCTCTCACGCCATATCTCGATAATTTAGGCACCATTTTC
TCGAAAACATATTCTACAGCAGCTCAATGCGCGCTGCACGCGGGATGCAG
CTGTTGTTGTATACTCCGGAGTATTACATATTACCAGTGCTTTTTGGGGC
AGCTTTTAAGGGGTGCATAACGGTGGTATATATACATGAAAGCTGTGTCA
GGACCTTAAAAACGCTCCTCTTTTGTTTGTGCCGCATATGTATGTATCTA
GCGTGCCCAAGAGTTCATTTGTAAGTGGGGGAAAAGGGGACGGGAAAACA
CTCTCGTGTTGTTGGCCACAATGCGAAACAAAATAGAAACCTTGATCCCA
ACACGGCAAGCGCTCTTGAGACGTAACACACTGCGGCCAACACGAAGGAT
GGACGGTGGGGAGGAGAACGCAAAGTGTTGTGCGGTTTGGCTGTTGTAGA
CACAAGCAACAACGGTGGTGGGCTTCCATATAACAGCAGTCTTTAGTTGT
CGGAGATCGTTTCAACGTGATCCATCGACATGCGCACGCGAAAGCTGTTG
GGGTGCAACCCCTAGACGGCAGCGGTTTCATCGCTGCTGTCCCCAACGCC
CACCAGTTTTGCAACACCCTGGATCAGGCCGGAAAGAAACAACTGCCCCC
TGATCGTCGGATCACCGCACACGCGGTGGTGGTGTCTTGTGTGTAGGTAC
ATATGCGTGGTTTCTCGTGTCTCCTGAGTTCGTTTTTGGATGACCCTAAT
CATCCAGGCACGCACGCACGCAATCACTCAAGCGATTGGAGGCGAGGTAA
ATTAGGCCTAGTTTGATGCCAGATTATGTACTTCGAAGTAGTATCATACA
CAAAAACAACAACAAACACACATCGACGTAAATTAGGCCTAGTTTGATGC
CAGATTATGTTCTTCGAAGTAGTATCATACACAAAAACAACAACAAACAC
ACACCGACAACCGCGACTTGGACAACAACACGCAGGTGGCGCACGTTTTC
GTTAACCTGGCCAACCTGGTGCTGCTCTCCCGCGGCAAGAACATCCTGTC
GGAGGACTTTAAGTACTACTCCCCGGGCACCGGGAGGCTCGACCGCGACA
GGTTTGCGGTGTGGGGGGCGATGGTCTACCTCCTTGGTTCACTCACGGGG
GGGGGTGCGACGCCTTGATTCCCTTCACTACAATACCCCAAGAGCACCGT
AGCGTGTAGAAGCTTCATGAAGCCGTGGTCGATCCTGATGTGTCTACATG
TATTACATCATGCTTCAGCCAGAAGCGGCGGATCTTTCCTGCGGCCGTTT
GACGGATTTCTGGAGAAACTGCTTGATTCTACAAAAGTAGTTCCGTACGA
TTCTGGTGCCGAAGAGCACTACAGCAGCACAACTAGTCCTGCAATATTCT
TGGCCTTGGCCCACCTACGCCGCAGAAACGTAAACGTTCACCGCTTTGCT
GGTCCCGACGACTGTTGTCCCCGTCTGTCTCTCCCACGGCGTCTGACGCA
ACCCACAGATTCCTGAGGCTCACGAAGACTTTGGACGTGGCGTTCTCCAC
CTTCCGGGTGTACCCTACGGACTTCACGGTGAGAGAAAAGTGGTGGATGT
GTAGTCTAATATTTACGTAAAAAATGCCACTAAATAAATAGCAACACTTC
GAAGCGGGATAAAATGAAGTAGTGTGATTTTTTTTTTTCAAATAGCAATA
CTTCGAAAGGGGGATAATATGTAAGGTGATTTCATTTTGCCATTGCATAA
ATAATGATGGCGTTCTACACCTTCCGAGTTTAAGTTTTTACCCGAGCGAA
TTTTGTGGAGGTATTTGATAGATTGCCTATCTACATATGATTGTACCCCG
TATTCACGCAGGTGGGAGTTTAAACAATAGCAAAGCACCACGCCAAAAAT
TGAAAATTACGTGGTCCGTGGGGAAACGCTGTTTGAGAAAAACATCGGGG
TTGAGCACAGCAGAGTTGCTGATTTGTCCGTCGGCGGACGTTGTCTTCGT
CTCTTCTCGGTGAAGGCAACACCAAGGACTGCACAGGAAAGTATTTCAAT
CGAAGTATTTCACATTTTGCACAAATATCAAATACTGGTACATCCTCACA
TGGTTTGTTTTTTTTTACGAATGGACGTGCGAAAATGCCGAAAAATCTGC
TGTAGGCGCCGGCGCCCCCTCCCCCGGGCATTTAGCGCGGCCACCTTTTG
TTTGATCTGTGGCGGGATTTCTCGCCAGGGGGGTCAAGCGCTCAACTCTT
CAAGCCTGGACAGTAAGAAGTCTGGATCGCAAGTCAACCTTCACCCTTTA
CACTCCTCTTCGCCCGGTTACACATAGATACGAGCTGAGGTGATAATACA
ATCATCGTCAAACGACAACAACTCCTCCCCCCCCCCCCCCCCCCCCCCCC
CCCGCCCTCCCCCCCTGCCCATCCGCGCGTCCTCAACAAAGGCCCGCCCC
CCCCCCCCGCCCCCCCCCCCCCCCCNNNNNNNNNNACAAGAGGAGGCGAT
AAAACCAAACTCCGCCAACGCCCACCCCCCCCCCCCCCCCCCCCCCAGCT
TTCTGTGAATAATACGCTTTGCAAGAGAGCTTGTTGTTGAGAACCGACCC
CCCCGCCCCCCCCCACTCCCCCCCTCTCGCCGACGTTGCCACAGCCGGTC
CACCGCTTCCGGCCACACCGGACGAACTAAACACCCGCGCCGCGTTCCCC
CCCCTTTCCCCTTTCCCCTTCCCCGTCATCGCCTTTGCAGGCGTACAAGG
ACGGAGTCGTCACCTACCGGCGGACTTTCAGGGCCGAGCACGACGGCTAC
CTTACTGTCGGCGACAAGGCAAGCCAGTCAATCCCTGGCCCGCGACACGA
TCGAATAAACAGAGACCCGTTACGCCCCTGTCTGTCTGTCTATCTGTACA
TACTATACATACGTACGTACGCACCATGCATGGATTTTTTTTCCTGTCTT
TGTGTCCCCTGGCCATGAGGGTTTATTCCGTCGTTTGATTTTATTTGCAT
ATCCTGATTATTGTTGTTGAGAAGACGCCATGCTGAGTGTCTGTTGTAGG
TATGTTTTGAGCTTCCAACCGGAAGTGCGTGTGTCGTCTTTTGCTGGTGG
TTGTGGTTACGCATGGGCAAGCCGGCGGACCAAATAAAACGCCACATCAC
TCTGTGTGGAAACCCTAAGCATCACAGAGCTCCACCTCCTGTCTGGAGAT
CCCGTCTTTGGTATCCCGAGTTCTATTCAAAGCCCCCTCTCCGAAGGGGG
GAGGGGGGGGCACAGCGCATAGACCACGTTGTTCGGGACGACGAAACGGT
TGGCCCTGTTTGTTGCTTTCAGCTCTTTTTCGTAAAGAGTAATCAGAGAG
TGGCTTCGGGCAGACTTTGTGCTACTTTTTTTTGTGTGTTTCGTGCTGCG
GGCCGCCCCCCCCCCCTCGAGACGGGCGGCACCGGTTTCTCGTCGTTGCA
GGCCTGGCTGTCGCAAAAAGCCGCCCCCCCCACTCACTTTCCGTGCAAGC
GGGCCCCCACGCGTAATCAGTCCCCTGCTTGCAGCGCTTCTGATATTTAG
TGTCATCTGCGCATATCGTTCACTCCCAGCCGATTGTTTGTCTCCTGTCT
TTCGCTGGGGGGGTGTCTCGTGTCCTCCCGGGTGTATGTGTATGTGTGCT
CCTCCATGTGTATCAACCATCCACCGGCTCAGACGTGCCTCTTCACACCT
CTCTCTCTGTGATTAATTTCCGTCTCCTGTTCCCACCCCAAACTCCCTGG
TTTGACATCGTCGTTCTCCCTCTCCCCCTCCCCCCCCCTCGCCGCCGCCG
CCGCCGCCGCCGCTGCAGACATACCCACCTAGCCAGACGAAGGTGATCTC
GGACGTGGACCTGTGCGCCGTGTCGTTCGACGACACGGGGGTTATTCGCT
CCTACGCGTACGGCCTCATGGTGGAGTTGGTTTACGCCATCGAAGAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1163:95..5441-

>mRNA_L-elsbetiae_contig1163.1414.1 ID=mRNA_L-elsbetiae_contig1163.1414.1|Name=mRNA_L-elsbetiae_contig1163.1414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig1163:95..5441- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGTCGGCGACCTTCGGCGAGAAGATTAACACGGACCGGATCGTGTT
GGATAAGACGGCGAGGGAGGCTATCGAGGAAAGATACCCGGAGGCTTCCG
CCAAGTGTCCCACGTTTCTTGATGGTGTCGGCGACCTTCGGCGAGAAGAT
TAACACGGACCGGATCGTGTTGGATAAGACGGCGAGGGAGGCTATCGAGG
AAAGATACCCGGAGGCTTCCGCCAAGTGTCCCACGTTTCTTGACGAGGTC
GGGCACGGGGAGACAAGGACATTCACCGAAGAGCAGCTCAGGAAGCGACT
CGAGACGAGGTCGGGCACGGGGAGACAAGGACATTCACCGAAGAGCAGCT
CAGGAAGCGACTCGAGGTGGCGCACGTTTTCGTTAACCTGGCCAACCTGG
TGCTGCTCTCCCGCGGCAAGAACATCCTGTCGGAGGACTTTAAGTACTAC
TCCCCGGGCACCGGGAGGCTCGACCGCGACAGGTGGCGCACGTTTTCGTT
AACCTGGCCAACCTGGTGCTGCTCTCCCGCGGCAAGAACATCCTGTCGGA
GGACTTTAAGTACTACTCCCCGGGCACCGGGAGGCTCGACCGCGACAGAT
TCCTGAGGCTCACGAAGACTTTGGACGTGGCGTTCTCCACCTTCCGGGTG
TACCCTACGGACTTCACGATTCCTGAGGCTCACGAAGACTTTGGACGTGG
CGTTCTCCACCTTCCGGGTGTACCCTACGGACTTCACGGCGTACAAGGAC
GGAGTCGTCACCTACCGGCGGACTTTCAGGGCCGAGCACGACGGCTACCT
TACTGCGTACAAGGACGGAGTCGTCACCTACCGGCGGACTTTCAGGGCCG
AGCACGACGGCTACCTTACTACATACCCACCTAGCCAGACGAAGGTGATC
TCGGACGTGGACCTGTGCGCCGTGTCGTTCGACGACACGGGGGTTATTCG
CTCCTACGCGTACGGCCTCATGGTGGAGTTGGTTTACGCCATCGAAGACA
CATACCCACCTAGCCAGACGAAGGTGATCTCGGACGTGGACCTGTGCGCC
GTGTCGTTCGACGACACGGGGGTTATTCGCTCCTACGCGTACGGCCTCAT
GGTGGAGTTGGTTTACGCCATCGAAGAC
back to top