mRNA_L-elsbetiae_contig11629.1413.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI) HSP 1 Score: 181 bits (460), Expect = 1.650e-52 Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 4 GDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSFETGFLKGNRP 312 GDRSTTWANKQALAAAI VDPALA+RVL ER WRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVH NFEF+R+GKSMKLA AM+SITGSFET +KG +P Sbjct: 23 GDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKP 125
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.580e-27 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 1 QGDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSFETGFLKGNRP 312 +GDRSTT+ANK AL AA + P A + ER WR+ Y KY+ +HV ACL+ K+ AV +++AGL+WVH NFEFI+DGK+M L+ AM +I +F+T + G+ P Sbjct: 23 EGDRSTTYANKAALKAASGAIRPEEAAAIDAERNWRKNYGKYLLRHVSACLEVKDGAVTAAEAGLQWVHDNFEFIKDGKTMPLSTAMATIKSTFKTATVTGSVP 126
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A0A7S2ABF6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2ABF6_9EUKA) HSP 1 Score: 103 bits (258), Expect = 3.680e-26 Identity = 47/100 (47.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 4 GDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSFETGFLKG 303 GDR+TT K+ AAA++ V+ A+ + GE+ WR +Y KYV ++VE LQS E A++ ++ GL+W++ NFEF+RDG++M L +A+ +I GSF TGF++G Sbjct: 19 GDRNTTPTQKKLWAAAVQEVNQQAAKAIAGEKSWRHRYNKYVIQNVELSLQSPENALSIARNGLDWIYENFEFVRDGETMNLNEALENIKGSFYTGFVQG 118
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A0A0L0G802_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G802_9EUKA) HSP 1 Score: 102 bits (254), Expect = 1.130e-25 Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 1 QGDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSFETGFLKGNRP 312 +G RST A + A AAAI +D E+ L E+ WR+ YTK+V K VE + +AAV ++AGLE +H F+F+RDG +M ++ AMTSI+ SFETG +KG++P Sbjct: 19 EGGRSTQIAGRAAYAAAIGAIDKIAGEKTLKEKSWRKGYTKHVTKFVELSVVDAKAAVIGAEAGLEHMHDQFQFVRDGTAMSISKAMTSISTSFETGIVKGSKP 122
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A0A7S3W6Z5_9SPIT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3W6Z5_9SPIT) HSP 1 Score: 94.7 bits (234), Expect = 1.760e-20 Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 10 RSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSFETGFLKGNRP 312 RST K+ LA A+ VD + A V E+ WR KY ++ K VE S EAA+ + AGL++++ FEFIRDGK+ L DA+ GSF TGF+KGN+P Sbjct: 29 RSTQTTGKEILAVALEAVDASAAAAVRSEKGWRFKYRRHFVKSVEVSASSPEAALKVAAAGLDYMYDKFEFIRDGKTYVLRDALAQFKGSFATGFIKGNKP 129
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: W7TMF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF0_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.520e-19 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 16 TTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGS--FETGFLKG 303 +T+ NK A AAA+ VD A ++ E+QWRQKY KY+ + V+ L+S + AV+ ++ GLE+ + NFEFIRDGK+ KL +AM GS +ETG +KG Sbjct: 62 STFGNKGAWAAAVGAVDKAEGLKIEKEKQWRQKYAKYIVRQVQVGLKSPKNAVSVAQGGLEYCYQNFEFIRDGKTYKLGEAMEKFGGSHSYETGVIKG 159
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A0A0L0D1Y2_THETB (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D1Y2_THETB) HSP 1 Score: 81.6 bits (200), Expect = 6.910e-16 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 1 QGDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTS-ITGSFETGFLKGNRP 312 +G RSTT A K + A+ V D A + G+R WR Y +++ + V+ C +SK++AV+ SKA L H FEF+RDG++ LA+AM SF TG ++G P Sbjct: 210 KGKRSTTAACKDIFSTAVEVQDAEAAAAIRGDRGWRFSYPQHLLRMVQLCCKSKKSAVSISKALLRRAHSTFEFVRDGQTFTLAEAMDGRFADSFYTGVVEGEAP 314
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A0A7S1L587_NEODS (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1L587_NEODS) HSP 1 Score: 81.6 bits (200), Expect = 6.920e-16 Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 10 RSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSFETGFLKG 303 RSTT N+ AA++ VDP + E+ WR Y K+V ++VE +S + +KAGL+++H NFEF+ +M +ADAMT I G+F+T ++G Sbjct: 224 RSTTIVNQGTYVAAVKDVDPEASAAAAKEKNWRYGYAKHVVRNVEISCKSNATCLKVAKAGLDYLHANFEFVTKDGTMSVADAMTKIPGTFQTYTIEG 321
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A9VE74_MONBE (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VE74_MONBE) HSP 1 Score: 80.9 bits (198), Expect = 1.300e-15 Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 4 GDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSF 282 G RST+ + LA ++ VDP A V+ ER WR Y K+ ++V L++ E A+ ++ GL+++H FEF+RDGK M LA AM++IT SF Sbjct: 292 GTRSTSSTGQAVLARSVMDVDPQAAVAVMKERNWRFGYGKHFIENVRISLRTPETALKVAQTGLDYMHNQFEFVRDGKVMSLATAMSTITASF 384
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Match: A9V436_MONBE (GPI ethanolamine phosphate transferase 3 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V436_MONBE) HSP 1 Score: 80.9 bits (198), Expect = 1.340e-15 Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 4 GDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHGNFEFIRDGKSMKLADAMTSITGSF 282 G RST+ + LA ++ VDP A V+ ER WR Y K+ ++V L++ E A+ ++ GL+++H FEF+RDGK M LA AM++IT SF Sbjct: 632 GTRSTSSTGQAVLARSVMDVDPQAAVAVMKERNWRFGYGKHFIENVRISLRTPETALKVAQTGLDYMHNQFEFVRDGKVMSLATAMSTITASF 724 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11629.1413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11629.1413.1 >prot_L-elsbetiae_contig11629.1413.1 ID=prot_L-elsbetiae_contig11629.1413.1|Name=mRNA_L-elsbetiae_contig11629.1413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp QGDRSTTWANKQALAAAIRVVDPALAERVLGERQWRQKYTKYVYKHVEACback to top mRNA from alignment at L-elsbetiae_contig11629:5343..5654+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11629.1413.1 ID=mRNA_L-elsbetiae_contig11629.1413.1|Name=mRNA_L-elsbetiae_contig11629.1413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=312bp|location=Sequence derived from alignment at L-elsbetiae_contig11629:5343..5654+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11629:5343..5654+ >mRNA_L-elsbetiae_contig11629.1413.1 ID=mRNA_L-elsbetiae_contig11629.1413.1|Name=mRNA_L-elsbetiae_contig11629.1413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig11629:5343..5654+ (Laminarionema elsbetiae ELsaHSoW15)back to top |