mRNA_L-elsbetiae_contig11629.1410.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11629.1410.1
Unique NamemRNA_L-elsbetiae_contig11629.1410.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: D8LB56_ECTSI (Glyoxalase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB56_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 2.230e-96
Identity = 144/161 (89.44%), Postives = 151/161 (93.79%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDS-KAKAYAR-YSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEPAP 477
            LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYI LQLD ++ KAKA A  Y+CAAA GGGV+ISGPDGYKYKA+P IEGRKERFVSVGLKVSDLP S+AYWCDLLGMS+FS PAP
Sbjct:   16 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYICLQLDVEATKAKAEAEGYACAAASGGGVLISGPDGYKYKAIPSIEGRKERFVSVGLKVSDLPASTAYWCDLLGMSKFSAPAP 176          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S2V7L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7L4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.540e-61
Identity = 97/158 (61.39%), Postives = 115/158 (72.78%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYARYSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEPA 474
            LKIG+LKKSM F+E VLG+KVLRHEEF  GCEATCNGPY GAWSKTMIGYGPE+E FALELTYNYGID Y+ G+DLQYI+L ++ D KA      +C      G +I GPD YKYK +    GR E F  VGL+V+DL  +  YW +LLG+ +F  PA
Sbjct:   10 LKIGNLKKSMYFYEKVLGMKVLRHEEFSSGCEATCNGPYAGAWSKTMIGYGPEKENFALELTYNYGIDSYEFGNDLQYIALGVE-DIKAVLNKAETCGFVVTEGNLIHGPDSYKYKIIQQEAGRTESFAVVGLRVADLAKAEDYWVNLLGLQKFDPPA 166          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S3UZB1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZB1_HETAK)

HSP 1 Score: 199 bits (506), Expect = 1.480e-59
Identity = 104/160 (65.00%), Postives = 120/160 (75.00%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLD-RDSKAKAYARYSCAAAGGGG--VIISGPDGYKYKAVPP-IEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSE 468
            LKIG+LKKSM F+ENVLGL+VLRHEEF  GCEATCNGPY GAWSKTMIG GPEE+ FALELTYNYGID Y+ GDDLQY+ L  D  + +AKA      A  GG G  ++I GPDGY+Y  VPP  EGR+E +V VGLKV+DL +S  YWC LLG+    E
Sbjct:  259 LKIGNLKKSMHFYENVLGLQVLRHEEFKSGCEATCNGPYAGAWSKTMIGRGPEEQHFALELTYNYGIDAYRAGDDLQYLCLSGDLAEYEAKARRFGYPAEFGGKGETLLIEGPDGYRYLVVPPGAEGREEAWVCVGLKVADLDSSLRYWCGLLGLKDLGE 418          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S3UXG7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXG7_HETAK)

HSP 1 Score: 199 bits (506), Expect = 5.090e-58
Identity = 104/160 (65.00%), Postives = 120/160 (75.00%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLD-RDSKAKAYARYSCAAAGGGG--VIISGPDGYKYKAVPP-IEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSE 468
            LKIG+LKKSM F+ENVLGL+VLRHEEF  GCEATCNGPY GAWSKTMIG GPEE+ FALELTYNYGID Y+ GDDLQY+ L  D  + +AKA      A  GG G  ++I GPDGY+Y  VPP  EGR+E +V VGLKV+DL +S  YWC LLG+    E
Sbjct:  430 LKIGNLKKSMHFYENVLGLQVLRHEEFKSGCEATCNGPYAGAWSKTMIGRGPEEQHFALELTYNYGIDAYRAGDDLQYLCLSGDLAEYEAKARRFGYPAEFGGKGETLLIEGPDGYRYLVVPPGAEGREEAWVCVGLKVADLDSSLRYWCGLLGLKDLGE 589          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A835YGN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGN6_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.400e-57
Identity = 92/157 (58.60%), Postives = 115/157 (73.25%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYARYSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEP 471
            LK+G+LK+S+ F E VLGL+VLRHEEF EGCEATCNGPY GAWSKTM+GYGPE + FALELTYNYGID Y +GDDLQYI++      +      Y+   A G    ++GPDGY+++ VP I+GR ERFVSV ++VSD   S  YWC LLG+++   P
Sbjct:   19 LKVGNLKESLRFLEGVLGLRVLRHEEFTEGCEATCNGPYAGAWSKTMVGYGPERDNFALELTYNYGIDSYASGDDLQYIAVASPMALERAKLFGYAVDEASG---TVTGPDGYRFRIVPEIQGRAERFVSVAIRVSDANASEKYWCGLLGLTQQRSP 172          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S2V686_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V686_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.250e-57
Identity = 99/157 (63.06%), Postives = 112/157 (71.34%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYARYSCAAAG----GGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSR 459
            LKIG+LK+SM FFE VLGL+ LRHEEF+ GCEATCNGPYGGAWSKTMIGYGPE E FALELTYNYGIDGY+ G+DLQYI+L       A  YA     A G     G  +ISGPD YKYK VP   G  ERFV+VGL+V  L  +  Y+ D+LGM  
Sbjct:   75 LKIGNLKESMKFFEGVLGLRTLRHEEFESGCEATCNGPYGGAWSKTMIGYGPERENFALELTYNYGIDGYEFGNDLQYIAL-------ACPYAFVRAKALGFEADEGSGVISGPDNYKYKIVPECAGVAERFVAVGLRVKSLAKAKEYYGDILGMKE 224          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S2V5K7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5K7_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.210e-57
Identity = 93/159 (58.49%), Postives = 116/159 (72.96%), Query Frame = 1
Query:    1 LKIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYAR-YSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEPA 474
            LKIG+LK+SM FFE VLGL+ LRHEEF+ GCEATCNGPYGGAWSKTMIGYGPE+E FALELTYNYGID Y+ G+DLQYI+L     +  +A A  Y C   GG  + + GPD Y+Y+ + P E     F +VG++V+DL  +  YW +LLG+ +F  PA
Sbjct:   75 LKIGNLKESMKFFEGVLGLRTLRHEEFESGCEATCNGPYGGAWSKTMIGYGPEKEHFALELTYNYGIDSYEFGNDLQYIALAAPAGAADRAKALGYECVEEGGS-ITVVGPDSYRYRLLEPQEA--PAFGAVGVRVADLAKAEDYWVNLLGLQKFETPA 230          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A0M0J531_9EUKA (Glyoxalase domain-containing protein 4-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J531_9EUKA)

HSP 1 Score: 181 bits (460), Expect = 1.020e-52
Identity = 87/158 (55.06%), Postives = 113/158 (71.52%), Query Frame = 1
Query:    4 KIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQL-DRDSKAKAYARYSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEPA 474
            KIGSLK S+ F+E V G +VLRHEEF+ GCEATCNGPYGGAWSKTM+G G E + F  ELTYNYGID Y +G+D+QY ++ + +   +A+A+  Y    AGG   +I GPD ++YK V P  GR ER ++VGL+ +DL  +  YWCD+LGM+ F  PA
Sbjct:   23 KIGSLKNSLRFYELVFGFRVLRHEEFESGCEATCNGPYGGAWSKTMVGLGNENDNFVFELTYNYGIDSYASGNDVQYFAVAMPEAVPRAQAFG-YGVEYAGGM-PVIKGPDNFRYKIVEPSAGRAERILAVGLRSTDLAATKQYWCDVLGMTVFPTPA 178          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S0XQV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0XQV7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.140e-50
Identity = 86/156 (55.13%), Postives = 102/156 (65.38%), Query Frame = 1
Query:    4 KIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYARYSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEP 471
            KIG+LK+S+ FF  V G +VLRHEEF  GCEATCNGPYGGAWSKTM+G+GPEE  F  ELTYNYGID Y +GDD+Q   L         A   Y      G   +I GPD +KYK V  +  R ERF++V LK SDL  S  YWC +LGMS+ + P
Sbjct:   25 KIGNLKESLRFFSQVFGFRVLRHEEFASGCEATCNGPYGGAWSKTMVGWGPEETNFVFELTYNYGIDSYASGDDVQCFVLACPEARDRAASLGYEVGYERGI-AVIHGPDNFKYKIVDALP-RAERFLAVVLKSSDLAASEKYWCGVLGMSKLAAP 178          
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Match: A0A7S3UYM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM7_HETAK)

HSP 1 Score: 176 bits (447), Expect = 1.580e-50
Identity = 88/157 (56.05%), Postives = 110/157 (70.06%), Query Frame = 1
Query:    4 KIGSLKKSMTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFALELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYARYSCAAAGGGGVIISGPDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEPA 474
            K+G+L++SM F+E VLGL+VLRHEEF+ GCEATCNGPY G WSKTM+GYGPE+E FALELTYNYGID Y+ G+D QYI +  +  + A+A A         G   I GPD Y ++ V       ERF  V L+VSDLP + AYWC LLG+++F  PA
Sbjct:  156 KVGNLRRSMQFYEEVLGLRVLRHEEFESGCEATCNGPYAGQWSKTMVGYGPEKENFALELTYNYGIDAYEFGNDYQYIGV-AEPAALARAKALGYPIGQRDGAQYIVGPDSYCFR-VAERRPAAERFQCVALRVSDLPRAEAYWCGLLGLAKFEVPA 310          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11629.1410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB56_ECTSI2.230e-9689.44Glyoxalase domain containing protein n=2 Tax=Ectoc... [more]
A0A7S2V7L4_9STRA6.540e-6161.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3UZB1_HETAK1.480e-5965.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UXG7_HETAK5.090e-5865.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YGN6_9STRA2.400e-5758.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V686_9STRA4.250e-5763.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2V5K7_9STRA9.210e-5758.49Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0M0J531_9EUKA1.020e-5255.06Glyoxalase domain-containing protein 4-like protei... [more]
A0A7S0XQV7_9STRA1.140e-5055.13Hypothetical protein (Fragment) n=1 Tax=Chrysocyst... [more]
A0A7S3UYM7_HETAK1.580e-5056.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11629contigL-elsbetiae_contig11629:2284..3783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score279.6
Seed ortholog evalue8.3e-73
Seed eggNOG ortholog2880.D8LB56
KEGG koko:K03671
KEGG Pathwayko04621,ko05418,map04621,map05418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methylglyoxal metabolic process
EggNOG OGsCOG0346@1,COG0526@1,KOG0907@2759,KOG2943@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons4
Model size477
Cds size450
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11629.1410.1prot_L-elsbetiae_contig11629.1410.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11629 2284..3756 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815366.2830083-CDS-L-elsbetiae_contig11629:2283..24801622815366.2830083-CDS-L-elsbetiae_contig11629:2283..2480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 2284..2480 -
1691682863.393587-CDS-L-elsbetiae_contig11629:2283..24801691682863.393587-CDS-L-elsbetiae_contig11629:2283..2480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 2284..2480 -
1622815366.2981882-CDS-L-elsbetiae_contig11629:2524..25521622815366.2981882-CDS-L-elsbetiae_contig11629:2524..2552Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 2525..2552 -
1691682863.4079466-CDS-L-elsbetiae_contig11629:2524..25521691682863.4079466-CDS-L-elsbetiae_contig11629:2524..2552Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 2525..2552 -
1622815366.3107543-CDS-L-elsbetiae_contig11629:3124..32551622815366.3107543-CDS-L-elsbetiae_contig11629:3124..3255Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 3125..3255 -
1691682863.4163787-CDS-L-elsbetiae_contig11629:3124..32551691682863.4163787-CDS-L-elsbetiae_contig11629:3124..3255Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 3125..3255 -
1622815366.3294702-CDS-L-elsbetiae_contig11629:3662..37561622815366.3294702-CDS-L-elsbetiae_contig11629:3662..3756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 3663..3756 -
1691682863.4252367-CDS-L-elsbetiae_contig11629:3662..37561691682863.4252367-CDS-L-elsbetiae_contig11629:3662..3756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11629 3663..3756 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815366.3476958-UTR-L-elsbetiae_contig11629:3756..37831622815366.3476958-UTR-L-elsbetiae_contig11629:3756..3783Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11629 3757..3783 -
1691682863.434965-UTR-L-elsbetiae_contig11629:3756..37831691682863.434965-UTR-L-elsbetiae_contig11629:3756..3783Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11629 3757..3783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11629.1410.1

>prot_L-elsbetiae_contig11629.1410.1 ID=prot_L-elsbetiae_contig11629.1410.1|Name=mRNA_L-elsbetiae_contig11629.1410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
MTFFENVLGLKVLRHEEFDEGCEATCNGPYGGAWSKTMIGYGPEEEGFAL
ELTYNYGIDGYKNGDDLQYISLQLDRDSKAKAYARYSCAAAGGGGVIISG
PDGYKYKAVPPIEGRKERFVSVGLKVSDLPTSSAYWCDLLGMSRFSEPAP
back to top

mRNA from alignment at L-elsbetiae_contig11629:2284..3783-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11629.1410.1 ID=mRNA_L-elsbetiae_contig11629.1410.1|Name=mRNA_L-elsbetiae_contig11629.1410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig11629:2284..3783- (Laminarionema elsbetiae ELsaHSoW15)
CTGAAGATCGGAAGTTTGAAGAAGTCGATGACCTTTTTCGAGAACGTGTT GGGCCTGAAGGTGCTACGACACGAGGAGTTTGACGAAGGTTGCGAGGCCA CCTGCAACGGCCCGTACGGCGGTGAGAGTGCATGTATGACAGCTTTTATT TCGCCATGATCCCACGTCCCGGCTGCCTGTCGTGATTTACTCCTTGCGCG CAAGTCCTGGCTTCGCGACACGCGCCTTGGAAAAAAGTACGCATGCGCGT TGAGCACTCTGAAATTTCGCCATGCGTTGGGGCGCTCGCTACATATGCCC CGTCAACGACGCCGCAACGCACACACGCGTCCATGGTAGCTCCTCCAAGC GTACCCACGGACGGCTGGCCCGAGGCGGCAGTGTGGGCACCCAAAAAAAG GCTGGACAAGCGAAGGCACCGGCTCCATCGCGATCCCCCAGAGCAAGAAC AAACGTATTTCCAAGCATACATGTATACGCCATGTTTCCGTTCTTTGAAA AGGAACCGACAATATCTGCTTGCCGCAGGCGCCTGGTCGAAGACGATGAT CGGGTACGGCCCGGAGGAGGAAGGCTTCGCCCTGGAGCTGACCTATAACT ACGGCATTGACGGCTACAAGAACGGGGACGACCTGCAATACATCTCCTTG CAGCTGGATGTGGAGGCGACTAAGGCCAAGGCAGAGGCAGAAGGCGAGGA AACCCACAACAACACGGGCGCGAGAATCGCGAAAGGAAGGGGGGGGGGGG GGTTGACCTTGGTGGGAGTTCCAGTTTGAGTAAAATATGCGCGTTGGGGA GGGACTCCATGCGTGAGGTGTGAACGCTCTCCGTGTCAAGGAAACAAATG ACGACCAGTTCAAGTTGAGAGGTCGATTCCAATCAAGTGTACGTGCGTTG CGCAGCACTACTGGTGCGACCTTTACGCCCATGGTCGCCCACTCACAGGT TGATAAATAGAAGTGAACCGGCACTCGTGAAAATCTCGGGTTCATCTGTG AAAACAAACGCGTCCCACTTGTGTTGATACTCTGAAGAAACCAAGCCATA CCGGGAGATGCCTTGCTTTTCGTTCGCGGGACACCCAAACCAAGAGCCAC TACCATATGTATTAGTAGCTGATATCCACAGGTGGCGAGATATCCGAAAG CGCTCACTGTTTGCAAGGCCGATGTACAAGTTCACGCCGAGCCTCCGGTA CCTTCGCAACTACGTAACCGGGCGGGGAAAGCGAGACTCAAAAGCCAAAG CCTATGCTCGTCGGAAACCCGGACGCAACCGAACGGGAACATTTTGCCTC CAGGTTACTCTTGCGCGGCGGCCGGCGGCGGGGGCGTTATCATCTCTGGC CCTGACGGCTACAAGTACAAGGCCGTCCCGCCCATCGAGGGACGCAAGGA ACGGTTCGTTTCCGTCGGCCTCAAGGTTTCGGACCTGCCCACGTCGTCCG CGTATTGGTGCGACCTCCTCGGGATGTCCAGATTTTCGGAGCCGGCGCCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig11629:2284..3783-

>mRNA_L-elsbetiae_contig11629.1410.1 ID=mRNA_L-elsbetiae_contig11629.1410.1|Name=mRNA_L-elsbetiae_contig11629.1410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig11629:2284..3783- (Laminarionema elsbetiae ELsaHSoW15)
ATGACCTTTTTCGAGAACGTGTTGGGCCTGAAGGTGCTACGACACGAGGA
GTTTGACGAAGGTTGCGAGGCCACCTGCAACGGCCCGTACGGCGATGACC
TTTTTCGAGAACGTGTTGGGCCTGAAGGTGCTACGACACGAGGAGTTTGA
CGAAGGTTGCGAGGCCACCTGCAACGGCCCGTACGGCGGCGCCTGGTCGA
AGACGATGATCGGGTACGGCCCGGAGGAGGAAGGCTTCGCCCTGGAGCTG
ACCTATAACTACGGCATTGACGGCTACAAGAACGGGGACGACCTGCAATA
CATCTCCTTGCAGCTGGATGCGCCTGGTCGAAGACGATGATCGGGTACGG
CCCGGAGGAGGAAGGCTTCGCCCTGGAGCTGACCTATAACTACGGCATTG
ACGGCTACAAGAACGGGGACGACCTGCAATACATCTCCTTGCAGCTGGAT
CGAGACTCAAAAGCCAAAGCCTATGCTCCGAGACTCAAAAGCCAAAGCCT
ATGCTCGTTACTCTTGCGCGGCGGCCGGCGGCGGGGGCGTTATCATCTCT
GGCCCTGACGGCTACAAGTACAAGGCCGTCCCGCCCATCGAGGGACGCAA
GGAACGGTTCGTTTCCGTCGGCCTCAAGGTTTCGGACCTGCCCACGTCGT
CCGCGTATTGGTGCGACCTCCTCGGGATGTCCAGATTTTCGGAGCCGGCG
CCGGTTACTCTTGCGCGGCGGCCGGCGGCGGGGGCGTTATCATCTCTGGC
CCTGACGGCTACAAGTACAAGGCCGTCCCGCCCATCGAGGGACGCAAGGA
ACGGTTCGTTTCCGTCGGCCTCAAGGTTTCGGACCTGCCCACGTCGTCCG
CGTATTGGTGCGACCTCCTCGGGATGTCCAGATTTTCGGAGCCGGCGCCG
back to top