mRNA_L-elsbetiae_contig11624.1408.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 224 bits (571), Expect = 2.950e-69 Identity = 104/121 (85.95%), Postives = 114/121 (94.21%), Query Frame = 1 Query: 1 QVGYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYT 363 +VGYDPKRSKVSDD LAEFIR+A+TGD+TEVPGI RGAEILA+GEG DKVTNTYQLIGKFLALRGPD+ + EVDSVEHCDKFWYWLQ+KGI ++RSGIVNAIAEKVNTWIPGIYDADSYT Sbjct: 3 EVGYDPKRSKVSDDKLAEFIRSAVTGDLTEVPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDKTDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSYT 123
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A835Z4N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N7_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.140e-52 Identity = 80/122 (65.57%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 1 QVGYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYTA 366 + GYDPKRSKV+D+ LAEFIR ITG++TEVPGIG + LA GEG +KV NTYQLIGKFL+L+G D++ + + ++EHCD+FWYWL+ GI ++RSGIVNAIAEK NTWIPGIYD D Y A Sbjct: 4 EAGYDPKRSKVTDEKLAEFIRQPITGELTEVPGIGPAAVKKLAAGEGSNKVANTYQLIGKFLSLKGGDDSGKTIQTIEHCDRFWYWLKEMGISSYRSGIVNAIAEKCNTWIPGIYDEDQYDA 125
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: K0QZN8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZN8_THAOC) HSP 1 Score: 174 bits (441), Expect = 8.600e-50 Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 7 GYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYTASD*SE 381 GYDPKRS+VSDD+L +FIRA + GDITEVPGIG A+ LAEGE + +TNTYQLIGKFL L+GPD + +V+S+EHC+KFWYWLQ K I AHRS IV AIA KVN +PG+YDAD Y D E Sbjct: 5 GYDPKRSRVSDDSLMDFIRAQVQGDITEVPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDTDDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYDADLYDDDDDEE 129
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.350e-46 Identity = 75/124 (60.48%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 4 VGYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGV-DKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYTASD 372 +GYDP RSKVSD T+ +F+R+ ITGD+TEVPGIG LA G+ D++TNT+QLIGKFL L+GPDE + ++D +EH +KFWYWL+ KGI +HRS IV AI EK+NT IPGIYDA Y D Sbjct: 5 LGYDPSRSKVSDSTMTDFLRSQITGDVTEVPGIGPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDEDDMKIDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPGIYDASIYAEDD 128
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A7S2V4V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V0_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.580e-46 Identity = 74/122 (60.66%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 7 GYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYTASD 372 GYDPKRS +S+D LA F+R ITGDIT+VPGIG+ A LA + + +TN++QLIGKFL ++GPD EVD V HC+KFWY+L+SKG+ +HRSGIV+AIAEK+NT IPGIYD+D + D Sbjct: 4 GYDPKRSSISEDALATFLRNPITGDITQVPGIGKAAAAALASADDDEPITNSFQLIGKFLLMKGPDTEEGEVDCVMHCNKFWYYLKSKGVNSHRSGIVHAIAEKINTMIPGIYDSDVFEDED 125
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A6U3Z2B1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z2B1_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.930e-45 Identity = 79/129 (61.24%), Postives = 99/129 (76.74%), Query Frame = 1 Query: 7 GYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAE-GEG---VDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYTASD*SE 381 GYDP+RSKVSDDT A F R A++G++T+VPGIG A+ L + G+G D+VTNTYQLIGKFL L+GPDE +V+SVEH +KFW++L+ KGI +HRSGIV AIAEKVNT +PGIYDA Y + E Sbjct: 4 GYDPRRSKVSDDTFASFQRDALSGELTDVPGIGPAAAKKLGQIGDGETEFDRVTNTYQLIGKFLMLKGPDEDGNKVESVEHMEKFWWYLKQKGISSHRSGIVRAIAEKVNTMLPGIYDASEYEEDEDDE 132
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A7S1ZJR7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJR7_TRICV) HSP 1 Score: 160 bits (405), Expect = 3.550e-44 Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 1 QVGYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSY 360 + GYDP+RS+VS+DTL +F+R ITG+ITEVPGIG A+ LAEG+ D+VTNT+QLIGKF+ L+GPD+ +V EH KFW+WL K I +HRS IV AIAEK+N +PGIYDAD+Y Sbjct: 24 ETGYDPRRSRVSEDTLNDFLRGKITGEITEVPGIGPAAAKRLAEGDDDDRVTNTWQLIGKFMMLKGPDDDEHKVGPGEHMQKFWHWLAEKEIKSHRSAIVKAIAEKMNQMMPGIYDADAY 143
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A2D4C4D0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D0_PYTIN) HSP 1 Score: 159 bits (402), Expect = 4.360e-44 Identity = 74/120 (61.67%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 7 GYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKVTNTYQLIGKFLALRGPDEANRE--VDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSY 360 GYDP++S+V++DTLA+F+RA +TGD+TEVPGIG+ LA GE D+V NT+QLIGKFL L+ + N + +D EHCD FWYWL+SKGI A+RSGIV AIAEKVNT +PGIYDA + Sbjct: 4 GYDPQKSRVAEDTLADFLRAPLTGDLTEVPGIGKAAVGKLAAGEEGDRVENTFQLIGKFLMLKQSTDKNEDGLIDCAEHCDAFWYWLKSKGIQAYRSGIVMAIAEKVNTMLPGIYDAAEF 123
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A7S2MQ62_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQ62_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.170e-43 Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = 1 Query: 7 GYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGA----EILAEGEGVDKVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSYTASD*SE 381 GYDP+RSKV++ T A F R +TG++T+VPGIG A EI E + D++TNTYQLIGKFL L+GPDE +V+S+EH +KFW++L+ KGI +HRSGIV AIAEKVNT IPGIYDA Y D E Sbjct: 13 GYDPRRSKVNESTFANFQREQLTGELTDVPGIGPAAARKLGEIGDEEKDSDRITNTYQLIGKFLMLKGPDEDGHKVESMEHMEKFWWFLKEKGISSHRSGIVRAIAEKVNTMIPGIYDASEYDEDDSDE 141
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Match: A0A7S2UIU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIU1_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.340e-42 Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 1 Query: 7 GYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVD-KVTNTYQLIGKFLALRGPDEANREVDSVEHCDKFWYWLQSKGIIAHRSGIVNAIAEKVNTWIPGIYDADSY 360 GYDP+RS+VS+DT F+R ITG ITEVPGIG + AE LA + D ++TNTYQLIGKFL L+GPD+ +V S++H +KFWY+L+ +GI +HRS IV AIAEK+N +IPGIY+ D Y Sbjct: 5 GYDPRRSRVSEDTFQNFVRGNITGVITEVPGIGPKAAEKLAASDDTDDRITNTYQLIGKFLMLKGPDDDENKVASMQHMEKFWYYLKERGIASHRSAIVKAIAEKMNMFIPGIYERDCY 123 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11624.1408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11624.1408.1 >prot_L-elsbetiae_contig11624.1408.1 ID=prot_L-elsbetiae_contig11624.1408.1|Name=mRNA_L-elsbetiae_contig11624.1408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp QVGYDPKRSKVSDDTLAEFIRAAITGDITEVPGIGERGAEILAEGEGVDKback to top mRNA from alignment at L-elsbetiae_contig11624:3115..6114+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11624.1408.1 ID=mRNA_L-elsbetiae_contig11624.1408.1|Name=mRNA_L-elsbetiae_contig11624.1408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3000bp|location=Sequence derived from alignment at L-elsbetiae_contig11624:3115..6114+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11624:3115..6114+ >mRNA_L-elsbetiae_contig11624.1408.1 ID=mRNA_L-elsbetiae_contig11624.1408.1|Name=mRNA_L-elsbetiae_contig11624.1408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig11624:3115..6114+ (Laminarionema elsbetiae ELsaHSoW15)back to top |