mRNA_L-elsbetiae_contig11613.1400.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 622 bits (1603), Expect = 7.910e-219 Identity = 326/412 (79.13%), Postives = 352/412 (85.44%), Query Frame = 2 Query: 119 MSARCSTCRSSARWAKLLLL-TCGGSQVRDVAGFGLGVRPAAFLQQQQQHTTTYPAVQVRMSESGATEHSSGDRGRY-LEPTDRGEFLRNSAAFLVGGSAAMVAAVAAVAGSPQPAEAIGDLYEFKEQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAG---GEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAPGSPFEPEQPQGSIFMAYEGEAFGVVLLPAAKGDQINPGGAVSVAILAEDVEKIAEDLGGRVSVDSDRGGVRSVAVADPDGYRLNFVEYGDWQKQLPRLV 1339 M R STCR RWA+LL+L TCG +V AGFGLG RP+ +QQ+Q HT T A QV MSES A++ SS RG EPT RG+FLRNSAAFL GGSAA+ AA A AG P AEAIGDLYEFK+QARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSS N YGGHFTLELN+QKE A GEEDVDFFYDPGNGVQFLQIAVDSYRISQV+KAGGIIESGYG+LQVLAPGGLRLKLLSGSRRDPPMF+AVKVKDM RSV+WYTD+AGM+K PFP+AR GSPFEPEQP GS+FMAYEGEAFGVVL+PAAKGDQINPG VSVA+LAEDVEKIAE LGG+VSVDS RGG +SVAVADPDGY + FVEY DW+ QLPRLV Sbjct: 1 MKTRSSTCRC-VRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQ-HTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRLV 410
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 269 bits (688), Expect = 2.250e-81 Identity = 153/303 (50.50%), Postives = 198/303 (65.35%), Query Frame = 2 Query: 437 VAGSPQPAEAIGDLYEFKEQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNT--TVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKAR-APGSPFEPEQPQGSIFMAYEGEAFGVVLLPAAKGDQ--INPGGAVS-VAILAEDVEKIAEDLGGRVSVDSDRGGVRSVAVADPDGYRLNFVEYGDWQKQL 1327 VAGSP+ AIG+L E Q RF QHA V VPD+ AA++FY +G+GM+V+R+RA NT T V +GPE L VP + GVSS AYGGHF+LEL A GE FYDPGNGVQ++QIAVD+YRIS+VI AGG + GYG GL++ L SG RRDP MF+A+KV D+ +SV+WYTD+ GMS+ P+PKAR A S FEP+QP+GS+FM Y+ + GV+L+P K D+ I G A S +A+LA DVE + +G + + VADPDGY VEY D+ ++L Sbjct: 86 VAGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 209 bits (533), Expect = 9.080e-59 Identity = 128/305 (41.97%), Postives = 182/305 (59.67%), Query Frame = 2 Query: 449 PQPAEAIGDLYEFKEQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAPGSPFEPEQPQGSIFMAYEGEAFGVVLLPAAKGDQ---INPGGAVS-VAILAEDV--EKIAEDL---GGRVSVDSDRGGVRSVAVADPD---GYRLNFVEYGDWQKQL 1327 P A AIG+L E+ RF QH + VPDMAAAL FY+DG+ M+V+R+R N+T VG+GPE L+ P + GVSS + YG HF LELN EV E D DPGN +LQ+AV S R+S++ +AGG I+S YG++ V +PGGLR +++ G RRDP M +A+ V D+ ++ +Y + GM + P+P +R P S +EP+QP+GS F+A+ + FG++LLP K + + GG V +AIL DV + AED G V + G+ + D G + VE D +K+L Sbjct: 55 PNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELN---EVLKTEEGDTPVL-DPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKEL 355
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.650e-57 Identity = 113/269 (42.01%), Postives = 161/269 (59.85%), Query Frame = 2 Query: 407 SAAMVAAVAAVAGSPQPAEAIGDLYEFKEQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAPGSPFEPEQPQGSIFMAYEGEAFGVVLLPAAKGDQINPGGAVS-VAILAEDVEKIAED 1210 S+A++ +VA G QP +IG+L EF + A+F QH V+V DM AAL+F + G+ M V+RTR N T VG+GPE L P FV GVSS YGGHF+LEL + E+ F +PG +Q++Q+A + ++IKAGGII GYG+ V+AP GL ++ RDP +IA+KVKDM +S+ +Y + GM KL + R S FEP QP+GS+ M Y + ++L+PA + D I G + +AI+ VE I ++ Sbjct: 12 SSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL---EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGKE 277
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 205 bits (521), Expect = 1.650e-57 Identity = 128/303 (42.24%), Postives = 170/303 (56.11%), Query Frame = 2 Query: 467 IGDLYEFKEQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLF--NTTVVGFGPEALE---VPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDF-----FYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARA-PGSPFEPEQPQGSIFMAYEGEAFGVVLLPA----AKGDQINPGGAVS-VAILAEDVEKIAEDLGGRVSVDSDRGGVRSVAVADPDGYRLNFVEYGDWQKQL 1327 +G L E + R+ QHA V VP M AL FY G+GM+VIRTR P N T VG+GPE L+ V F G+SS N YG HFTLEL ++ +D D Y+PGNGVQFLQIA+ R+SQ+ + GG I YG+++V APGGL L+++ G RRDP MF VKD++ + +Y GM +LP+ KAR P SP EP+QPQ S +M Y + FG++L+ AK I G +AIL+ +V + L + G A D GY L VEY D++K+L Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 118 bits (295), Expect = 6.550e-25 Identity = 85/286 (29.72%), Postives = 142/286 (49.65%), Query Frame = 2 Query: 503 FAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAV-DSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAPGSPFEPEQPQGSIFMAYEG--EAFGVVLLPAAKGDQINPGGAVSVAILAEDVEK-----IAEDLGGRVSVDSDRGGVRSVAVADP-DGYRLNFVEYGDWQKQLPR 1333 F QHA ++V D+ ++KF+ G+GMKV RTR N V FGPE L A GG F LEL N QF Q A+ +S R+++V +GG I G+G+ ++ AP G ++ + +RRDP + V V D+ + ++Y + GM+ + G FEP + +GS+ M Y E G++L+P + + + ++ +A+L +DV + +A L + + + G V++A P +G L FV+Y D++++ P+ Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRG----NQAFVSFGPETLTA------------ADGGKFALELVENPSTTQD------------NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQPK 410
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A0M0JPX6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPX6_9EUKA) HSP 1 Score: 102 bits (255), Expect = 4.310e-20 Identity = 72/233 (30.90%), Postives = 115/233 (49.36%), Query Frame = 2 Query: 503 FAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKL-LSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAP------------GSPFEPEQPQGSIFMAYEGEAF--GVVLLPAAKGDQINPG 1156 F Q + VPDM A+ F+ G G V+ T+ N T +GFGP+++ + G F LE+ + ++ G +Q++Q+A+ +R+SQV+K GG I+S YG+ Q+ APGGL L++ + SRRDP F+A++ + SV Y + G+ K+ R +EP++ GSI M+Y + GV+LLP KG ++ G Sbjct: 105 FYQSMRIGVPDMDKAVTFWTKGCGALVLDTKLVNGVNVTRIGFGPQSI------------RRDDGAKFALEMVEGPSTS----------FETGGVLQYVQLAIPIFRLSQVMKNGGDIQSAYGWTQLTAPGGLPLRVHIDESRRDPFEFVALRTSSLKSSVAHYESL-GLRKVDEKSGRKVELSINKNTIFENSDAYEPDREVGSILMSYGDKKAETGVLLLPPLKGAKLITG 314
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 100 bits (248), Expect = 5.780e-19 Identity = 61/181 (33.70%), Postives = 100/181 (55.25%), Query Frame = 2 Query: 521 VQVPDMAAALKFYVDGVGMKVIRT-RAGPL-FNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLEL-NTQKEVAAGGEEDVDF-FYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKLLSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAPGSP 1051 V+VPD+AAA +F++DG+ M +R+ R GP VVG+G E L+ GG F+LEL A +D + + ++Q+ V + RIS ++++GG IES YG+++V +PGGL +++++ RRDP F+A++V D+ + +Y GM ++P P R P Sbjct: 131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDD------------GGKFSLELVQASARAPAPARLALDAPDAEAAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A7S2H0Q2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H0Q2_9EUKA) HSP 1 Score: 98.2 bits (243), Expect = 1.400e-18 Identity = 68/235 (28.94%), Postives = 115/235 (48.94%), Query Frame = 2 Query: 503 FAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKL-LSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARA-------------PGSPFEPEQPQGSIFMAYEGEAF--GVVLLPAAKGDQ-INPG 1156 F + + VP++ A++F+ G G ++ +R N T +GFGP+ S + G F LEL E F+ + +Q++Q+A+ +R+SQV+ GG I S YG+ +V+APGGL L++ + +RRDP FIA++ ++ + + Y ++ GM+ L + EPE+ GS+ M + GV+LLP KG + ++PG Sbjct: 105 FCRGLRIGVPNLDEAVRFWTSGCGALLLDSRMIDGHNVTTIGFGPQ------------SPRAEDGAKFALEL----------VEGAPTFFGDDSPLQYIQLAMPIFRLSQVVAYGGKILSAYGWTEVIAPGGLPLRVRIEETRRDPFEFIALRTSNLRAATKHYEEVLGMNTLSETSRKKFKLESINQNTIFENSDALEPEREAGSVLMTFGAAELTTGVLLLPPTKGRKALDPG 317
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Match: A0A7S0IK92_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IK92_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 2.900e-17 Identity = 73/235 (31.06%), Postives = 116/235 (49.36%), Query Frame = 2 Query: 491 EQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSQNAYGGHFTLELNTQKEVAAGGEEDVDFFYDPGNGVQFLQIAVDSYRISQVIKAGGIIESGYGFLQVLAPGGLRLKL-LSGSRRDPPMFIAVKVKDMTRSVEWYTDIAGMSKLPFPKARAP---------GSPFEPEQPQGSIFMAY-EGEAF-GVVLLP--AAKGDQINP 1153 E++ F Q V V D+ AL F+ +G+G V TR N TVVGFGPE+L G F++EL + G + +Q++Q+A+ +R+SQ + GG I+S YG+ ++APGG L++ + +RRDP F A++V ++ +V + + PF K + FEP++ G+ M+Y + EA GV+LLP A K ++P Sbjct: 129 ERSHFLQRLAVPVDDIEGALNFWRNGLGALVRSTRIVDGRNVTVVGFGPESLRAVD------------GAKFSVELVSAPTSVEGSQ------------LQYIQLAMPVFRLSQAMAYGGDIKSAYGWTDLVAPGGTPLRVRIDETRRDPFEFAALRVSNLKAAVRHFEAFGMSAGEPFGKRKLSLLGNTAFEDRDAFEPDRELGATLMSYGDPEASTGVLLLPPLARKAVPLSP 339 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11613.1400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11613.1400.1 >prot_L-elsbetiae_contig11613.1400.1 ID=prot_L-elsbetiae_contig11613.1400.1|Name=mRNA_L-elsbetiae_contig11613.1400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=408bp MSARCSTCRSSARWAKLLLLTCGGSQVRDVAGFGLGVRPAAFLQQQQQHTback to top mRNA from alignment at L-elsbetiae_contig11613:1821..4639+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11613.1400.1 ID=mRNA_L-elsbetiae_contig11613.1400.1|Name=mRNA_L-elsbetiae_contig11613.1400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2819bp|location=Sequence derived from alignment at L-elsbetiae_contig11613:1821..4639+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11613:1821..4639+ >mRNA_L-elsbetiae_contig11613.1400.1 ID=mRNA_L-elsbetiae_contig11613.1400.1|Name=mRNA_L-elsbetiae_contig11613.1400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2448bp|location=Sequence derived from alignment at L-elsbetiae_contig11613:1821..4639+ (Laminarionema elsbetiae ELsaHSoW15)back to top |