mRNA_L-elsbetiae_contig11580.1376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6F9C6A9_9TELE (BED-type domain-containing protein n=2 Tax=Coregonus TaxID=27772 RepID=A0A6F9C6A9_9TELE) HSP 1 Score: 133 bits (334), Expect = 3.690e-32 Identity = 99/297 (33.33%), Postives = 156/297 (52.53%), Query Frame = 1 Query: 19 LAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQMKGARPA--LTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEW--HACTCHLLLLC---ALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR--IPT-----NCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 LA+ + D QPF++V+ + ++N V+ A + LPSR +S+ + + E +L ++ P+ LTTDCWTS + ++++T H+I + K + S L C EF + HTAE LA ++ + +++ ++D V +D AANI KA K+L +W H C H L L ALK+ +K T K + H ST +A+KL S Q++ IP CATRWNST++ + +L+ K AI STL ++ +W V +L F E T + DS++T S Sbjct: 119 LAKMVASDFQPFSIVEDKGMKNFVK--ALNPTYTLPSRKTLSQTMIPKLYDTERALWQERVTKAPSVCLTTDCWTSRTTCSFMSVTCHFIEDYK--MTSCLLDCFEFTDRHTAENLAVELLRVAKEWQVEDKVVCCVSDNAANITKA-IKVL---KWTHHPCLAHTLNLVVRDALKV-----IKTTVDKVKAVVEFFHKSTVAAQKLKSTQRQMGIPELRPKQECATRWNSTFDMLKRMLEIKDAI---ISTLALINASIEPLSQEEWELVKEVCAVLQPFQEVTVEISADSYVTAS 399
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6F9A0I1_9TELE (BED-type domain-containing protein n=8 Tax=Coregonus TaxID=27772 RepID=A0A6F9A0I1_9TELE) HSP 1 Score: 133 bits (334), Expect = 1.630e-31 Identity = 99/297 (33.33%), Postives = 156/297 (52.53%), Query Frame = 1 Query: 19 LAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQMKGARPA--LTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEW--HACTCHLLLLC---ALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR--IPT-----NCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 LA+ + D QPF++V+ + ++N V+ A + LPSR +S+ + + E +L ++ P+ LTTDCWTS + ++++T H+I + K + S L C EF + HTAE LA ++ + +++ ++D V +D AANI KA K+L +W H C H L L ALK+ +K T K + H ST +A+KL S Q++ IP CATRWNST++ + +L+ K AI STL ++ +W V +L F E T + DS++T S Sbjct: 123 LAKMVASDFQPFSIVEDKGMKNFVK--ALNPTYTLPSRKTLSQTMIPKLYDTERALWQERVTKAPSVCLTTDCWTSRTTCSFMSVTCHFIEDYK--MTSCLLDCFEFTDRHTAENLAVELLRVAKEWQVEDKVVCCVSDNAANITKA-IKVL---KWTHHPCLAHTLNLVVRDALKV-----IKTTVDKVKAVVEFFHKSTVAAQKLKSTQRQMGIPELRPKQECATRWNSTFDMLKRMLEIKDAI---ISTLALINASIEPLSQEEWELVKEVCAVLQPFQEVTVEISADSYVTAS 403
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI001E1C7E39 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C7E39) HSP 1 Score: 112 bits (279), Expect = 1.870e-24 Identity = 82/235 (34.89%), Postives = 121/235 (51.49%), Query Frame = 1 Query: 199 KGARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEW--HACTCHLLLLC---ALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR--IPT-----NCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 K LTTDCWTS + ++++T H+I + K + S L C EF + HTAE LA ++ + +++ ++D V +D AANI KA K+L +W H C H L L ALK+ +K T K + H ST +A+KL S Q++ IP CATRWNST++ + +L+ K AI STL ++ +W V +L F E T + DS++T S Sbjct: 19 KAPSVCLTTDCWTSRTTCSFMSVTCHFIEDYK--MTSCLLDCFEFTDRHTAENLAVELLRVAKEWQVEDKVVCCVSDNAANITKA-IKVL---KWTHHPCLAHTLNLVVRDALKV-----IKTTVDKVKAVVEFFHKSTVAAQKLKSTQRQMGIPELRPKQECATRWNSTFDMLKRMLEIKDAI---ISTLALINASIEPLSQEEWELVKEVCAVLQPFQEVTVEISADSYVTAS 239
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI0013B3E255 (zinc finger BED domain-containing protein 1-like n=1 Tax=Xiphophorus helleri TaxID=8084 RepID=UPI0013B3E255) HSP 1 Score: 110 bits (275), Expect = 3.310e-24 Identity = 91/299 (30.43%), Postives = 140/299 (46.82%), Query Frame = 1 Query: 1 QAILGALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQM-KGARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNE-PHVKATFVKHNKLTNHLHSSTTSAEKLASLQKRIPTNCA-------TRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNV-VYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 Q + AL IV D QPF +VD V D N LP+R + V + SA+ + ++ K A +LT+D WTS + YLA+T H++ ENK KL S LG F +SHTAE +A +ME++ I + TD A N+ +L + H C H L L + L++ P + K KL SSTT+ EKL +Q ++ TRWNSTY ++L + +++ A + +T +++ A + LL F +AT + + ++ S Sbjct: 56 QELDEALVSMIVKDTQPFTIVDDVGFRTFVSKL--DPNYVLPTRQALKAMVEAKYESAKEHAKAKVEKVAAVSLTSDMWTSINMDAYLAVTCHFVEENK-KLSSVLLGVQAFPQSHTAENIACVKASLMEEWGISGKVTCMVTDGAPNMVACMRELKLRH--HICVAHTLNLAVKRALDQHPVLSGLRAKARKLVGCFRSSTTAKEKLTQVQLQLGMQATKLMQEVETRWNSTY----LMLQRLVELREPVGAALAGLHTGIPFFTASEFDIVVACLSLLSPFYDATTELSAEEHVSAS 345
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E) HSP 1 Score: 109 bits (273), Expect = 2.930e-23 Identity = 92/297 (30.98%), Postives = 147/297 (49.49%), Query Frame = 1 Query: 16 ALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRR-VWTRALSAEASLREQMKGARP-ALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIME-QYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKIL--NEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQK-------RIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTL-GAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 AL + +D QP VV+ + + A + N +LPSR +S + + + A + +E +K +LTTD WTS S Y+ LT H+I ENK K + TL E +++HT+E LA ++ DI+E ++NI D + +TTD AANIKKA +L Q+ H+C H L L L NE ++ T K ++ + S +A KL +Q+ ++ + TRWNS Y + K + ++L G LN +W + +L + T ++ G+ + T S Sbjct: 125 ALMRMVCVDFQPLQVVENTGFQEYTR--ALNPNYELPSRKILSEKMIPEQYCMARRATQEMLKAIDYISLTTDLWTSDSSKSYMTLTIHFIHENKFKTL--TLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTLKDNELLIRMTD-KCREIVTYFKRSNNAAYKLKEVQEQMQLEPLKLKQDVQTRWNSVYYMLERLDKVKIPLSAAITSLPGCPDNLNA----EEWIEVHECLSILKPVEQMTSIISGEQYPTLS 411
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI001E68C7B8 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68C7B8) HSP 1 Score: 107 bits (267), Expect = 1.770e-22 Identity = 84/293 (28.67%), Postives = 145/293 (49.49%), Query Frame = 1 Query: 25 EFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVW-TRALSAEASLREQMKGARP-ALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKRIPTN---------CATRWNSTYEQGRVILDKKFAIQQ-LCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 + IVLD QPF+VV+ +NL+ + K+PSR +S + + + L+E+++ A+ ++TTD WTS + Y A+T H++ + K SA LGC E E HTAE + ++ ++ ++IQ+ TD AAN+K A L E C H L L L + + K + H H S+ + +KL S+Q+++ N TRWNST + ++++ ++Q+ L + LG +E +W + ++ +L F + T+ M + +T S Sbjct: 117 KMIVLDLQPFSVVEDAGFKNLINYL--EPGYKMPSRYILSNTLLDAQYAEVQKKLKEELESAKYISITTDGWTSRATTSYQAVTAHYLLNWQLK--SALLGCFECHERHTAEYIKNELYSLLSHWSIQNKIFVCVTDNAANMKAAIR--LTNYEHLPCVAHTLNLVVRAGLQDCGLGELIKKIKVIVEHFHKSSIATKKLISMQEQLMPNQKALKLKMDVITRWNSTLD----MIERISSLQEPLEACLGILHNPVENLSEGEWQSLPEIIKILKPFKQLTEEMSSEKKVTVS 399
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6G0Y6J5_APHCR (Zinc finger BED domain-containing protein 1-like n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0Y6J5_APHCR) HSP 1 Score: 104 bits (260), Expect = 1.540e-21 Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 1 Query: 13 GALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSR-RVWTRALSAEASLREQMKGAR-PALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAV-ALTTDTAANIKKAGTKL-LPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKRIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTEND--WSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 ALA FI P+NVV+ + V A + + KLPSR V+ R+ + S+ + +K A + TTDCWTS S P++A+T H+ KL S LGC+E E HT E +A+ + ++ Y I D + ++TTD +N+ KA L +P + C H L + ILN VK+ K N +K+IP+ TRW S E VI+D+ + N+++ E+D N ++ + E TD + GDS++T S Sbjct: 239 NALAYFIATSMTPYNVVEKEGFKLFVN--ALNPSYKLPSRKTVTESRIPNLYIETRNSVGKIIKRANYVSFTTDCWTSSSNKPFIAMTCHF--NTNFKLESVCLGCIELSEDHTGENIADIIQILILDYEIPDWKICSITTDHGSNMLKAVENLGIPHVD---CFGHALNIGVSVILNLDSVKSVVNKVNL-----------------PKKKIPSYSKTRWWSMLELINVIIDQDLRLASFLRAYKNGNHSNLIFQESDVILKNLKLILQPIR---EITDNLAGDSYVTGS 502
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A8D8X7K5_9HEMI (Zinc finger BED domain-containing protein 1 n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8X7K5_9HEMI) HSP 1 Score: 104 bits (259), Expect = 2.040e-21 Identity = 87/301 (28.90%), Postives = 143/301 (47.51%), Query Frame = 1 Query: 16 ALAEFIVLDQQPFNVVDARSLENLVQVAANDANLK----LPSRPPVSRRVWTRALSAE-----ASLREQMKGAR-PALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNEPHV-KATFVKHNKLTNHLHSSTTSAEKLASLQKRI-------PTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAE-GKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFIT 861 AL + + D QP ++V+ + + LK + +PP + + T L+ E ++LRE +K ++T+D WTS S YL +TGH+I + L L E + HTAE +A K+ DI++++ I VA+ TD AAN+KK L + + CT H L L +N+ V K T K K+ H S ++E L Q+R+ + TRWNS ++ D+ ++ + AE V + +DW+ V+LL +F +AT+ + G+ + T Sbjct: 115 ALLKMVCQDFQPLSLVENEGFQQYT-IQLQQTILKNEHGILYKPPNRKTLTTNLLNREFVKHSSNLREMLKLVNYVSITSDAWTSDSTKSYLTVTGHFIHNDT--LXXXVLATRELSKKHTAENIALKIRDIIDEFGIAAKVVAVVTDNAANMKKCVNDCLNKPHF-PCTAHTLNLVVEAAINDSLVLKNTIKKCRKIVAHFKQSCNASEALRQYQERLNLPVLKLKQDIETRWNSV----AIMFDRLIKTRRPLTMAMAELPNTPEVLSHDDWAILEDSVELLQVFVQATEQLSGEKYPT 407
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6G0VQN5_APHCR (Zinc finger BED domain-containing protein 1-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VQN5_APHCR) HSP 1 Score: 103 bits (258), Expect = 2.610e-21 Identity = 87/297 (29.29%), Postives = 134/297 (45.12%), Query Frame = 1 Query: 13 GALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQMKG--ARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQ---DTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR-------IPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 ALA FI +D P+N+V + V A +A+ +PSR ++ ++ E + + TTDCWTS S P+LALTGH+I ++K L S LGC+E E HT E LA+ + ++ YN+ A TTD ANI KA L Q C H I ++ K K+ N S + ++ Q+R +P+ TRW S + VILD++ I T +V ++++ ++ +L E TD + G+S++T S Sbjct: 65 AALAYFIAVDMMPYNLVTKDGFK--VYTNALNASYHIPSRKTITDSRIPNLYKDTKTIIESIVNNVCFMSFTTDCWTSGSNQPFLALTGHYI-DSKFNLGSVCLGCIELSEDHTGENLADTLQLLLLDYNLSISPKNVSAFTTDCGANIIKAIKNLDMQHV--PCFGHAFNTAVGNIFKLEEIQIALNKTQKIQNIFAHSWQAVREMKIEQERFGLKKLKLPSYSKTRWWSLLDLISVILDQELGISSFLKTYKNGQFKKLVLSDDEIDVLKSITMILKPVREITDHLAGESYVTAS 356
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI001C71DCE5 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C71DCE5) HSP 1 Score: 103 bits (256), Expect = 5.180e-21 Identity = 83/297 (27.95%), Postives = 143/297 (48.15%), Query Frame = 1 Query: 16 ALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQ----MKGARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAV-ALTTDTAANIKKAGTKL-LPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQK-------RIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867 A+++FIV QPF+VV+++S +N+V + + K+P R S R ++ + ++TTDCWTS S IPY+A+T H+I ++ +L SA L C F E HT++ +AE +T I+ +++ + + TTD NI KA + L +P C H + + K L P +K + KL N L S Q+ +P+ C TRW S + + L+ + I++L + K +++ N+ + +V+ L E + + G+ + T S Sbjct: 144 AVSKFIVETLQPFSVVESQSFKNMVHIL--NPRYKVPCRKYFSTTAIPRLFENVVDTIKRHLLAIDSNNVSITTDCWTSLSNIPYIAITVHFIN-SQWELQSACLTCKPFNEDHTSQNIAEAMTSILSDWDLDIANITSCTTDNGRNILKAVSLLEIPHVP---CFGHTINIGVNKALEIPSIKKAVSRVRKLQNALAHSWKMVRDFRKAQELMQMNVVSLPSACITRWWSILKLCKRFLENQLPIRKLLQDYPS--KKHLMADSNEVNTLEEIVNATKLLEEISKNLSGEGYTTAS 432 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11580.1376.1 >prot_L-elsbetiae_contig11580.1376.1 ID=prot_L-elsbetiae_contig11580.1376.1|Name=mRNA_L-elsbetiae_contig11580.1376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp QAILGALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRback to top mRNA from alignment at L-elsbetiae_contig11580:601..2277+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11580.1376.1 ID=mRNA_L-elsbetiae_contig11580.1376.1|Name=mRNA_L-elsbetiae_contig11580.1376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1677bp|location=Sequence derived from alignment at L-elsbetiae_contig11580:601..2277+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11580:601..2277+ >mRNA_L-elsbetiae_contig11580.1376.1 ID=mRNA_L-elsbetiae_contig11580.1376.1|Name=mRNA_L-elsbetiae_contig11580.1376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig11580:601..2277+ (Laminarionema elsbetiae ELsaHSoW15)back to top |