mRNA_L-elsbetiae_contig11580.1376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11580.1376.1
Unique NamemRNA_L-elsbetiae_contig11580.1376.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6F9C6A9_9TELE (BED-type domain-containing protein n=2 Tax=Coregonus TaxID=27772 RepID=A0A6F9C6A9_9TELE)

HSP 1 Score: 133 bits (334), Expect = 3.690e-32
Identity = 99/297 (33.33%), Postives = 156/297 (52.53%), Query Frame = 1
Query:   19 LAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQMKGARPA--LTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEW--HACTCHLLLLC---ALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR--IPT-----NCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            LA+ +  D QPF++V+ + ++N V+  A +    LPSR  +S+ +  +    E +L ++     P+  LTTDCWTS +   ++++T H+I + K  + S  L C EF + HTAE LA ++  + +++ ++D  V   +D AANI KA  K+L   +W  H C  H L L    ALK+     +K T  K   +    H ST +A+KL S Q++  IP       CATRWNST++  + +L+ K AI    STL          ++ +W     V  +L  F E T  +  DS++T S
Sbjct:  119 LAKMVASDFQPFSIVEDKGMKNFVK--ALNPTYTLPSRKTLSQTMIPKLYDTERALWQERVTKAPSVCLTTDCWTSRTTCSFMSVTCHFIEDYK--MTSCLLDCFEFTDRHTAENLAVELLRVAKEWQVEDKVVCCVSDNAANITKA-IKVL---KWTHHPCLAHTLNLVVRDALKV-----IKTTVDKVKAVVEFFHKSTVAAQKLKSTQRQMGIPELRPKQECATRWNSTFDMLKRMLEIKDAI---ISTLALINASIEPLSQEEWELVKEVCAVLQPFQEVTVEISADSYVTAS 399          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6F9A0I1_9TELE (BED-type domain-containing protein n=8 Tax=Coregonus TaxID=27772 RepID=A0A6F9A0I1_9TELE)

HSP 1 Score: 133 bits (334), Expect = 1.630e-31
Identity = 99/297 (33.33%), Postives = 156/297 (52.53%), Query Frame = 1
Query:   19 LAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQMKGARPA--LTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEW--HACTCHLLLLC---ALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR--IPT-----NCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            LA+ +  D QPF++V+ + ++N V+  A +    LPSR  +S+ +  +    E +L ++     P+  LTTDCWTS +   ++++T H+I + K  + S  L C EF + HTAE LA ++  + +++ ++D  V   +D AANI KA  K+L   +W  H C  H L L    ALK+     +K T  K   +    H ST +A+KL S Q++  IP       CATRWNST++  + +L+ K AI    STL          ++ +W     V  +L  F E T  +  DS++T S
Sbjct:  123 LAKMVASDFQPFSIVEDKGMKNFVK--ALNPTYTLPSRKTLSQTMIPKLYDTERALWQERVTKAPSVCLTTDCWTSRTTCSFMSVTCHFIEDYK--MTSCLLDCFEFTDRHTAENLAVELLRVAKEWQVEDKVVCCVSDNAANITKA-IKVL---KWTHHPCLAHTLNLVVRDALKV-----IKTTVDKVKAVVEFFHKSTVAAQKLKSTQRQMGIPELRPKQECATRWNSTFDMLKRMLEIKDAI---ISTLALINASIEPLSQEEWELVKEVCAVLQPFQEVTVEISADSYVTAS 403          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI001E1C7E39 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C7E39)

HSP 1 Score: 112 bits (279), Expect = 1.870e-24
Identity = 82/235 (34.89%), Postives = 121/235 (51.49%), Query Frame = 1
Query:  199 KGARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEW--HACTCHLLLLC---ALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR--IPT-----NCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            K     LTTDCWTS +   ++++T H+I + K  + S  L C EF + HTAE LA ++  + +++ ++D  V   +D AANI KA  K+L   +W  H C  H L L    ALK+     +K T  K   +    H ST +A+KL S Q++  IP       CATRWNST++  + +L+ K AI    STL          ++ +W     V  +L  F E T  +  DS++T S
Sbjct:   19 KAPSVCLTTDCWTSRTTCSFMSVTCHFIEDYK--MTSCLLDCFEFTDRHTAENLAVELLRVAKEWQVEDKVVCCVSDNAANITKA-IKVL---KWTHHPCLAHTLNLVVRDALKV-----IKTTVDKVKAVVEFFHKSTVAAQKLKSTQRQMGIPELRPKQECATRWNSTFDMLKRMLEIKDAI---ISTLALINASIEPLSQEEWELVKEVCAVLQPFQEVTVEISADSYVTAS 239          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI0013B3E255 (zinc finger BED domain-containing protein 1-like n=1 Tax=Xiphophorus helleri TaxID=8084 RepID=UPI0013B3E255)

HSP 1 Score: 110 bits (275), Expect = 3.310e-24
Identity = 91/299 (30.43%), Postives = 140/299 (46.82%), Query Frame = 1
Query:    1 QAILGALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQM-KGARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNE-PHVKATFVKHNKLTNHLHSSTTSAEKLASLQKRIPTNCA-------TRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNV-VYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            Q +  AL   IV D QPF +VD       V     D N  LP+R  +   V  +  SA+   + ++ K A  +LT+D WTS +   YLA+T H++ ENK KL S  LG   F +SHTAE +A     +ME++ I      + TD A N+     +L  +   H C  H L L   + L++ P +     K  KL     SSTT+ EKL  +Q ++            TRWNSTY    ++L +   +++      A     +  +T +++    A + LL  F +AT  +  +  ++ S
Sbjct:   56 QELDEALVSMIVKDTQPFTIVDDVGFRTFVSKL--DPNYVLPTRQALKAMVEAKYESAKEHAKAKVEKVAAVSLTSDMWTSINMDAYLAVTCHFVEENK-KLSSVLLGVQAFPQSHTAENIACVKASLMEEWGISGKVTCMVTDGAPNMVACMRELKLRH--HICVAHTLNLAVKRALDQHPVLSGLRAKARKLVGCFRSSTTAKEKLTQVQLQLGMQATKLMQEVETRWNSTY----LMLQRLVELREPVGAALAGLHTGIPFFTASEFDIVVACLSLLSPFYDATTELSAEEHVSAS 345          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E)

HSP 1 Score: 109 bits (273), Expect = 2.930e-23
Identity = 92/297 (30.98%), Postives = 147/297 (49.49%), Query Frame = 1
Query:   16 ALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRR-VWTRALSAEASLREQMKGARP-ALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIME-QYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKIL--NEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQK-------RIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTL-GAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            AL   + +D QP  VV+    +   +  A + N +LPSR  +S + +  +   A  + +E +K     +LTTD WTS S   Y+ LT H+I ENK K +  TL   E +++HT+E LA ++ DI+E ++NI D  + +TTD AANIKKA   +L Q+  H+C  H L L     L  NE  ++ T  K  ++  +   S  +A KL  +Q+       ++  +  TRWNS Y     +   K  +    ++L G    LN      +W      + +L    + T ++ G+ + T S
Sbjct:  125 ALMRMVCVDFQPLQVVENTGFQEYTR--ALNPNYELPSRKILSEKMIPEQYCMARRATQEMLKAIDYISLTTDLWTSDSSKSYMTLTIHFIHENKFKTL--TLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTLKDNELLIRMTD-KCREIVTYFKRSNNAAYKLKEVQEQMQLEPLKLKQDVQTRWNSVYYMLERLDKVKIPLSAAITSLPGCPDNLNA----EEWIEVHECLSILKPVEQMTSIISGEQYPTLS 411          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI001E68C7B8 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68C7B8)

HSP 1 Score: 107 bits (267), Expect = 1.770e-22
Identity = 84/293 (28.67%), Postives = 145/293 (49.49%), Query Frame = 1
Query:   25 EFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVW-TRALSAEASLREQMKGARP-ALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKRIPTN---------CATRWNSTYEQGRVILDKKFAIQQ-LCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            + IVLD QPF+VV+    +NL+     +   K+PSR  +S  +   +    +  L+E+++ A+  ++TTD WTS +   Y A+T H++   + K  SA LGC E  E HTAE +  ++  ++  ++IQ+      TD AAN+K A    L   E   C  H L L     L +  +     K   +  H H S+ + +KL S+Q+++  N           TRWNST +    ++++  ++Q+ L + LG         +E +W +   ++ +L  F + T+ M  +  +T S
Sbjct:  117 KMIVLDLQPFSVVEDAGFKNLINYL--EPGYKMPSRYILSNTLLDAQYAEVQKKLKEELESAKYISITTDGWTSRATTSYQAVTAHYLLNWQLK--SALLGCFECHERHTAEYIKNELYSLLSHWSIQNKIFVCVTDNAANMKAAIR--LTNYEHLPCVAHTLNLVVRAGLQDCGLGELIKKIKVIVEHFHKSSIATKKLISMQEQLMPNQKALKLKMDVITRWNSTLD----MIERISSLQEPLEACLGILHNPVENLSEGEWQSLPEIIKILKPFKQLTEEMSSEKKVTVS 399          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6G0Y6J5_APHCR (Zinc finger BED domain-containing protein 1-like n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0Y6J5_APHCR)

HSP 1 Score: 104 bits (260), Expect = 1.540e-21
Identity = 89/291 (30.58%), Postives = 136/291 (46.74%), Query Frame = 1
Query:   13 GALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSR-RVWTRALSAEASLREQMKGAR-PALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAV-ALTTDTAANIKKAGTKL-LPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKRIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTEND--WSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
             ALA FI     P+NVV+    +  V   A + + KLPSR  V+  R+    +    S+ + +K A   + TTDCWTS S  P++A+T H+      KL S  LGC+E  E HT E +A+ +  ++  Y I D  + ++TTD  +N+ KA   L +P  +   C  H L +    ILN   VK+   K N                   +K+IP+   TRW S  E   VI+D+   +             N+++ E+D    N   ++  +    E TD + GDS++T S
Sbjct:  239 NALAYFIATSMTPYNVVEKEGFKLFVN--ALNPSYKLPSRKTVTESRIPNLYIETRNSVGKIIKRANYVSFTTDCWTSSSNKPFIAMTCHF--NTNFKLESVCLGCIELSEDHTGENIADIIQILILDYEIPDWKICSITTDHGSNMLKAVENLGIPHVD---CFGHALNIGVSVILNLDSVKSVVNKVNL-----------------PKKKIPSYSKTRWWSMLELINVIIDQDLRLASFLRAYKNGNHSNLIFQESDVILKNLKLILQPIR---EITDNLAGDSYVTGS 502          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A8D8X7K5_9HEMI (Zinc finger BED domain-containing protein 1 n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8X7K5_9HEMI)

HSP 1 Score: 104 bits (259), Expect = 2.040e-21
Identity = 87/301 (28.90%), Postives = 143/301 (47.51%), Query Frame = 1
Query:   16 ALAEFIVLDQQPFNVVDARSLENLVQVAANDANLK----LPSRPPVSRRVWTRALSAE-----ASLREQMKGAR-PALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNEPHV-KATFVKHNKLTNHLHSSTTSAEKLASLQKRI-------PTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAE-GKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFIT 861
            AL + +  D QP ++V+    +    +      LK    +  +PP  + + T  L+ E     ++LRE +K     ++T+D WTS S   YL +TGH+I  +   L    L   E  + HTAE +A K+ DI++++ I    VA+ TD AAN+KK     L +  +  CT H L L     +N+  V K T  K  K+  H   S  ++E L   Q+R+         +  TRWNS      ++ D+    ++  +   AE      V + +DW+     V+LL +F +AT+ + G+ + T
Sbjct:  115 ALLKMVCQDFQPLSLVENEGFQQYT-IQLQQTILKNEHGILYKPPNRKTLTTNLLNREFVKHSSNLREMLKLVNYVSITSDAWTSDSTKSYLTVTGHFIHNDT--LXXXVLATRELSKKHTAENIALKIRDIIDEFGIAAKVVAVVTDNAANMKKCVNDCLNKPHF-PCTAHTLNLVVEAAINDSLVLKNTIKKCRKIVAHFKQSCNASEALRQYQERLNLPVLKLKQDIETRWNSV----AIMFDRLIKTRRPLTMAMAELPNTPEVLSHDDWAILEDSVELLQVFVQATEQLSGEKYPT 407          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: A0A6G0VQN5_APHCR (Zinc finger BED domain-containing protein 1-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VQN5_APHCR)

HSP 1 Score: 103 bits (258), Expect = 2.610e-21
Identity = 87/297 (29.29%), Postives = 134/297 (45.12%), Query Frame = 1
Query:   13 GALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQMKG--ARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQ---DTAVALTTDTAANIKKAGTKLLPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQKR-------IPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
             ALA FI +D  P+N+V     +  V   A +A+  +PSR  ++            ++ E +       + TTDCWTS S  P+LALTGH+I ++K  L S  LGC+E  E HT E LA+ +  ++  YN+        A TTD  ANI KA   L  Q     C  H        I     ++    K  K+ N    S  +  ++   Q+R       +P+   TRW S  +   VILD++  I     T        +V ++++     ++  +L    E TD + G+S++T S
Sbjct:   65 AALAYFIAVDMMPYNLVTKDGFK--VYTNALNASYHIPSRKTITDSRIPNLYKDTKTIIESIVNNVCFMSFTTDCWTSGSNQPFLALTGHYI-DSKFNLGSVCLGCIELSEDHTGENLADTLQLLLLDYNLSISPKNVSAFTTDCGANIIKAIKNLDMQHV--PCFGHAFNTAVGNIFKLEEIQIALNKTQKIQNIFAHSWQAVREMKIEQERFGLKKLKLPSYSKTRWWSLLDLISVILDQELGISSFLKTYKNGQFKKLVLSDDEIDVLKSITMILKPVREITDHLAGESYVTAS 356          
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Match: UPI001C71DCE5 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C71DCE5)

HSP 1 Score: 103 bits (256), Expect = 5.180e-21
Identity = 83/297 (27.95%), Postives = 143/297 (48.15%), Query Frame = 1
Query:   16 ALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRRVWTRALSAEASLREQ----MKGARPALTTDCWTSCSGIPYLALTGHWIRENKPKLVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAV-ALTTDTAANIKKAGTKL-LPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSSTTSAEKLASLQK-------RIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGKLNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS 867
            A+++FIV   QPF+VV+++S +N+V +   +   K+P R   S     R         ++    +     ++TTDCWTS S IPY+A+T H+I  ++ +L SA L C  F E HT++ +AE +T I+  +++    + + TTD   NI KA + L +P      C  H + +   K L  P +K    +  KL N L  S          Q+        +P+ C TRW S  +  +  L+ +  I++L     +  K +++   N+ +    +V+   L  E +  + G+ + T S
Sbjct:  144 AVSKFIVETLQPFSVVESQSFKNMVHIL--NPRYKVPCRKYFSTTAIPRLFENVVDTIKRHLLAIDSNNVSITTDCWTSLSNIPYIAITVHFIN-SQWELQSACLTCKPFNEDHTSQNIAEAMTSILSDWDLDIANITSCTTDNGRNILKAVSLLEIPHVP---CFGHTINIGVNKALEIPSIKKAVSRVRKLQNALAHSWKMVRDFRKAQELMQMNVVSLPSACITRWWSILKLCKRFLENQLPIRKLLQDYPS--KKHLMADSNEVNTLEEIVNATKLLEEISKNLSGEGYTTAS 432          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11580.1376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6F9C6A9_9TELE3.690e-3233.33BED-type domain-containing protein n=2 Tax=Coregon... [more]
A0A6F9A0I1_9TELE1.630e-3133.33BED-type domain-containing protein n=8 Tax=Coregon... [more]
UPI001E1C7E391.870e-2434.89E3 SUMO-protein ligase ZBED1-like n=1 Tax=Coregonu... [more]
UPI0013B3E2553.310e-2430.43zinc finger BED domain-containing protein 1-like n... [more]
UPI0018D0C22E2.930e-2330.98E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella... [more]
UPI001E68C7B81.770e-2228.67E3 SUMO-protein ligase ZBED1-like n=1 Tax=Maniola ... [more]
A0A6G0Y6J5_APHCR1.540e-2130.58Zinc finger BED domain-containing protein 1-like n... [more]
A0A8D8X7K5_9HEMI2.040e-2128.90Zinc finger BED domain-containing protein 1 n=1 Ta... [more]
A0A6G0VQN5_APHCR2.610e-2129.29Zinc finger BED domain-containing protein 1-like (... [more]
UPI001C71DCE55.180e-2127.95E3 SUMO-protein ligase ZBED1-like n=1 Tax=Parastea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11580contigL-elsbetiae_contig11580:601..2277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score113.6
Seed ortholog evalue1.5e-22
Seed eggNOG ortholog8049.ENSGMOP00000020500
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Conserved hypothetical protein
EggNOG OGs39UGI@33154,3BNFC@33208,3DFE3@33213,48J0R@7711,49G7Q@7742,4A752@7898,KOG1121@1,KOG1121@2759
COG Functional cat.L
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
Exons3
Model size867
Cds size867
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11580.1376.1prot_L-elsbetiae_contig11580.1376.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11580 601..2277 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815362.8660243-CDS-L-elsbetiae_contig11580:600..8491622815362.8660243-CDS-L-elsbetiae_contig11580:600..849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11580 601..849 +
1691682861.4401596-CDS-L-elsbetiae_contig11580:600..8491691682861.4401596-CDS-L-elsbetiae_contig11580:600..849Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11580 601..849 +
1622815362.882395-CDS-L-elsbetiae_contig11580:1254..16381622815362.882395-CDS-L-elsbetiae_contig11580:1254..1638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11580 1255..1638 +
1691682861.4513252-CDS-L-elsbetiae_contig11580:1254..16381691682861.4513252-CDS-L-elsbetiae_contig11580:1254..1638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11580 1255..1638 +
1622815362.8953638-CDS-L-elsbetiae_contig11580:2043..22771622815362.8953638-CDS-L-elsbetiae_contig11580:2043..2277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11580 2044..2277 +
1691682861.4612503-CDS-L-elsbetiae_contig11580:2043..22771691682861.4612503-CDS-L-elsbetiae_contig11580:2043..2277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11580 2044..2277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11580.1376.1

>prot_L-elsbetiae_contig11580.1376.1 ID=prot_L-elsbetiae_contig11580.1376.1|Name=mRNA_L-elsbetiae_contig11580.1376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
QAILGALAEFIVLDQQPFNVVDARSLENLVQVAANDANLKLPSRPPVSRR
VWTRALSAEASLREQMKGARPALTTDCWTSCSGIPYLALTGHWIRENKPK
LVSATLGCVEFRESHTAERLAEKVTDIMEQYNIQDTAVALTTDTAANIKK
AGTKLLPQEEWHACTCHLLLLCALKILNEPHVKATFVKHNKLTNHLHSST
TSAEKLASLQKRIPTNCATRWNSTYEQGRVILDKKFAIQQLCSTLGAEGK
LNVVYTENDWSNTAAVVDLLHLFCEATDVMQGDSFITNS
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mRNA from alignment at L-elsbetiae_contig11580:601..2277+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11580.1376.1 ID=mRNA_L-elsbetiae_contig11580.1376.1|Name=mRNA_L-elsbetiae_contig11580.1376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1677bp|location=Sequence derived from alignment at L-elsbetiae_contig11580:601..2277+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGATCCTTGGGGCACTGGCGGAGTTCATCGTTCTCGACCAGCAGCC GTTCAACGTCGTCGATGCACGCTCTCTCGAGAACTTGGTTCAAGTTGCTG CCAACGACGCCAACCTCAAGCTACCTTCTCGCCCTCCCGTTTCGAGGCGC GTGTGGACGAGGGCGCTTTCTGCGGAGGCGAGTCTTCGTGAGCAGATGAA GGGGGCCCGCCCGGCCCTGACCACCGACTGCTGGACCTCGTGCTCCGGGG TAAGTCGGCGGCTGGTCTTTGTTGCTATTTGTTTCGGCAGGCTTCGCTTG CATCCCTAACCTCATGTGCGTTGTCAGATCCGCCAGCACCTGTTGTTTCG TTTCAAGTGTCTGTGCATTTGATGTATGCAACAACATCGTGCATGGTTTA TTATGATGCATGTACATATGTCCAGACTACCAGGTTAATTTTGTTACATG AACACGTTCAGGTGTTCGTTATTTTGTTTCTGGTGCATATTTAGATGTCC ACAGCATCTCGTCGTGAATACACACGGACACGCGGACATCCGCTCCCTTG ACATCCCGCCTGCTTCCATTCTTATTGAGGCTCGAATTCTGACCCACGCT CCCTCTCTCACCCCTTGCACCATACTACGTCCCCGTCCGCAACTCTCTTG ACAGATACCGTACTTGGCCTTGACGGGACACTGGATCCGGGAGAACAAGC CGAAGCTCGTGTCGGCTACCCTGGGTTGCGTCGAGTTCCGGGAAAGCCAC ACCGCCGAGCGCCTCGCCGAGAAGGTCACCGACATCATGGAGCAGTACAA CATCCAGGACACTGCCGTGGCCTTAACGACCGACACTGCGGCGAACATCA AGAAGGCCGGCACCAAGCTCCTACCGCAGGAGGAGTGGCACGCGTGCACC TGTCACCTCCTGCTGCTGTGCGCCCTCAAGATCCTCAACGAGCCGCACGT GAAGGCGACCTTCGTCAAGCACAACAAGCTCACCAACCACCTCCACTCCT CGACGACCTCTGCGGAGAAGTTGGCTTCGCTTCAAAAGGTACGCGATAAA GGCTTTTTTTTTTTAAGGCAGCCAGGAGGACGATAAACTGTTACTACTTG CACCTTCTACACGCCAGGAATATCGCTTGATACTTCGTAGGAAAGAGGCA GGCAGATTATTGGCGTACAAAGAAGCTTCTGTATGTGTACCTCCCCTCAA GTTTGGGTTTTAAACAAAACTAATTGATTACCTGGGTTGCTTCCACACAG CCATTTTTTTGTGTGTGGTACGAGTAGCAGGGCGGGGAGATAAAAATGTG CACCAGCTGATGTGCCTGCACACCTCGGACTTATCCATGTCTTGCCGACT TTTTACGTTCCCTTTCGTCGATTTTTTCCCTGGCGTCGTTTGCCCCTCCC GCTCCTGACTTTGAAATTTCAGGCGGCTGAGAAACCCGTGAAGAGGATCC CCACCAACTGCGCAACTCGCTGGAACTCCACCTACGAGCAGGGAAGGGTC ATCTTGGACAAGAAGTTCGCCATACAGCAGCTCTGTTCCACCCTTGGCGC GGAGGGAAAGCTGAACGTCGTGTACACCGAGAACGACTGGTCGAACACGG CTGCCGTCGTCGACCTCCTGCACCTGTTCTGCGAGGCGACCGACGTCATG CAGGGAGACAGCTTCATCACCAACAGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11580:601..2277+

>mRNA_L-elsbetiae_contig11580.1376.1 ID=mRNA_L-elsbetiae_contig11580.1376.1|Name=mRNA_L-elsbetiae_contig11580.1376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig11580:601..2277+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGATCCTTGGGGCACTGGCGGAGTTCATCGTTCTCGACCAGCAGCC
GTTCAACGTCGTCGATGCACGCTCTCTCGAGAACTTGGTTCAAGTTGCTG
CCAACGACGCCAACCTCAAGCTACCTTCTCGCCCTCCCGTTTCGAGGCGC
GTGTGGACGAGGGCGCTTTCTGCGGAGGCGAGTCTTCGTGAGCAGATGAA
GGGGGCCCGCCCGGCCCTGACCACCGACTGCTGGACCTCGTGCTCCGGGC
AGGCGATCCTTGGGGCACTGGCGGAGTTCATCGTTCTCGACCAGCAGCCG
TTCAACGTCGTCGATGCACGCTCTCTCGAGAACTTGGTTCAAGTTGCTGC
CAACGACGCCAACCTCAAGCTACCTTCTCGCCCTCCCGTTTCGAGGCGCG
TGTGGACGAGGGCGCTTTCTGCGGAGGCGAGTCTTCGTGAGCAGATGAAG
GGGGCCCGCCCGGCCCTGACCACCGACTGCTGGACCTCGTGCTCCGGGAT
ACCGTACTTGGCCTTGACGGGACACTGGATCCGGGAGAACAAGCCGAAGC
TCGTGTCGGCTACCCTGGGTTGCGTCGAGTTCCGGGAAAGCCACACCGCC
GAGCGCCTCGCCGAGAAGGTCACCGACATCATGGAGCAGTACAACATCCA
GGACACTGCCGTGGCCTTAACGACCGACACTGCGGCGAACATCAAGAAGG
CCGGCACCAAGCTCCTACCGCAGGAGGAGTGGCACGCGTGCACCTGTCAC
CTCCTGCTGCTGTGCGCCCTCAAGATCCTCAACGAGCCGCACGTGAAGGC
GACCTTCGTCAAGCACAACAAGCTCACCAACCACCTCCACTCCTCGACGA
CCTCTGCGGAGAAGTTGGCTTCGCTTCAAAAGATACCGTACTTGGCCTTG
ACGGGACACTGGATCCGGGAGAACAAGCCGAAGCTCGTGTCGGCTACCCT
GGGTTGCGTCGAGTTCCGGGAAAGCCACACCGCCGAGCGCCTCGCCGAGA
AGGTCACCGACATCATGGAGCAGTACAACATCCAGGACACTGCCGTGGCC
TTAACGACCGACACTGCGGCGAACATCAAGAAGGCCGGCACCAAGCTCCT
ACCGCAGGAGGAGTGGCACGCGTGCACCTGTCACCTCCTGCTGCTGTGCG
CCCTCAAGATCCTCAACGAGCCGCACGTGAAGGCGACCTTCGTCAAGCAC
AACAAGCTCACCAACCACCTCCACTCCTCGACGACCTCTGCGGAGAAGTT
GGCTTCGCTTCAAAAGAGGATCCCCACCAACTGCGCAACTCGCTGGAACT
CCACCTACGAGCAGGGAAGGGTCATCTTGGACAAGAAGTTCGCCATACAG
CAGCTCTGTTCCACCCTTGGCGCGGAGGGAAAGCTGAACGTCGTGTACAC
CGAGAACGACTGGTCGAACACGGCTGCCGTCGTCGACCTCCTGCACCTGT
TCTGCGAGGCGACCGACGTCATGCAGGGAGACAGCTTCATCACCAACAGC
AGGATCCCCACCAACTGCGCAACTCGCTGGAACTCCACCTACGAGCAGGG
AAGGGTCATCTTGGACAAGAAGTTCGCCATACAGCAGCTCTGTTCCACCC
TTGGCGCGGAGGGAAAGCTGAACGTCGTGTACACCGAGAACGACTGGTCG
AACACGGCTGCCGTCGTCGACCTCCTGCACCTGTTCTGCGAGGCGACCGA
CGTCATGCAGGGAGACAGCTTCATCACCAACAGC
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