mRNA_L-elsbetiae_contig11579.1374.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: D7FP43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP43_ECTSI) HSP 1 Score: 364 bits (934), Expect = 2.680e-119 Identity = 186/276 (67.39%), Postives = 208/276 (75.36%), Query Frame = 3 Query: 387 ALGEVPVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRGGPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 ALG P AASAG+SHSCV+L G +KCWGEN+WGQ+GQND++VRG + MGD LP VPLG F A V SG EF+CAL G VKCWGRN GQLGLG+NETRGG + +MG NLP ++LGTGV E IAL G HACAVL G LKCWG N+ GQLGLGD L RG+ + +MGDNLP VDLG V+V+SVALG HTCAV+GDGDVKCWGNNDGGQLGYED RG G MG LP VDLG QRAIAVAAGFFHTCA+LYTG IKCWG Sbjct: 10 ALGCTPGARAASAGASHSCVVLVGGKIKCWGENYWGQVGQNDNLVRGDDASDMGDSLPYVPLG--EFEASLVASGSEFSCALAVDGAVKCWGRNSSGQLGLGDNETRGGQDDAFEMGDNLPVLDLGTGVAVESIALAGSHACAVLADGNLKCWGENEGGQLGLGDTLTRGNAMGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIA--VGQMGDLLPAVDLGTKQRAIAVAAGFFHTCALLYTGDIKCWG 281
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE) HSP 1 Score: 354 bits (908), Expect = 1.120e-107 Identity = 180/271 (66.42%), Postives = 205/271 (75.65%), Query Frame = 3 Query: 402 PVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRGGPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 P AASAG+SHSC +L G++KCWGENFWGQ+GQND++VRGKN MGD LP V LG F A V SG EFNCA + G VKCWGRN GQLGLG+NETRGG + +MG +LP V+LGTGV E I L G HACAV G +KCWG N+ GQLGLGDKL RG+ +MGD+LP VDLG GV+ +SVALG HTCAV+ DG VKCWGNNDGGQLGYED RGT AG MG LP VDLGRDQ+A++VAAGFFHTCA+LYTG IKCWG Sbjct: 96 PAARAASAGASHSCTVLVGGTIKCWGENFWGQVGQNDNLVRGKNASDMGDDLPYVQLGI--FEADMVASGSEFNCARSVDGEVKCWGRNTAGQLGLGDNETRGGVNDVFEMGNDLPVVDLGTGVTVESIGLAGSHACAVTLIGLVKCWGENEGGQLGLGDKLARGNLTGQMGDDLPYVDLGTGVLASSVALGARHTCAVVDDGGVKCWGNNDGGQLGYEDTAARGTA--AGEMGDSLPFVDLGRDQKAVSVAAGFFHTCALLYTGDIKCWG 362
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: D7FQH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH4_ECTSI) HSP 1 Score: 325 bits (832), Expect = 1.890e-105 Identity = 172/278 (61.87%), Postives = 202/278 (72.66%), Query Frame = 3 Query: 402 PVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALN-GGGGVKCWGRNELGQLGLGNNETRGGPSTSD-DMGANLPTVNLG--TGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTG---EGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 P +A SAGSSHSC +L D +VKC+G+N GQLGQ D + RG MGD LP VPLG +AVY SG EFNCA++ GG VKCWG+NE GQLGLG+ E RGGP+ +MG NLPTV+ +G+ E ++LGG ACAVL GG ++CWG N+ GQLGLGD NRGD+ +EMGD+LP VDLG G VV+SVA+G H CA + DG VKCWGNNDGGQLGYED LPRGTG +G G MG L VDLG QRAIAV AGFFHTCA+LY G +KCWG Sbjct: 23 PPATAVSAGSSHSCAVLSDATVKCFGDNTLGQLGQLDSLSRGLEATDMGDNLPTVPLGTFEAAAVY--SGNEFNCAVSVDGGSVKCWGQNEGGQLGLGDTEARGGPNDDIFEMGENLPTVDFSGNSGLSVESMSLGGSAACAVLTGGSVRCWGANEVGQLGLGDTENRGDEPDEMGDDLPFVDLGTGSVVSSVAVGAKHACATMEDGTVKCWGNNDGGQLGYEDRLPRGTGVEIDGRGGMGDALAAVDLGLGQRAIAVEAGFFHTCALLYEGDVKCWG 298
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A6H5JFU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU1_9PHAE) HSP 1 Score: 322 bits (825), Expect = 1.940e-100 Identity = 171/278 (61.51%), Postives = 202/278 (72.66%), Query Frame = 3 Query: 402 PVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALN-GGGGVKCWGRNELGQLGLGNNETRGGPSTSD-DMGANLPTVNLG--TGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTG---EGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 P V+A SAGSSHSC +L D +VKC+G+N GQLGQ D + RG N MGD LP VPLG +AVY SG EFNCA++ G VKCWG+N+ GQLGLG+ E RGG + +MG NLPTV+ +G+ E ++LGG ACA+L GG ++CWG N+ GQLGLGD NRGD+ +EMGD+LP VDLG G VV+SVA+G H CA + DG VKCWGNNDGGQLGYED LPRGTG +G G MG L VDLG QRAIAV AGFFHTCA+LY G IKCWG Sbjct: 21 PPVTAVSAGSSHSCAVLSDATVKCFGDNLLGQLGQLDSLSRGLNATDMGDNLPTVPLGTFQAAAVY--SGNEFNCAVSVDGDSVKCWGQNDGGQLGLGDTEARGGLNDEVFEMGENLPTVDFSGNSGLSVESMSLGGSAACALLTGGSVRCWGANEAGQLGLGDTENRGDEPDEMGDDLPFVDLGTGAVVSSVAVGAKHACATMEDGVVKCWGNNDGGQLGYEDRLPRGTGVEIDGVGGMGDALAAVDLGLGQRAIAVEAGFFHTCALLYEGDIKCWG 296
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT) HSP 1 Score: 260 bits (664), Expect = 1.130e-76 Identity = 144/279 (51.61%), Postives = 167/279 (59.86%), Query Frame = 3 Query: 387 ALGEVPVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRGGPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDG-GQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWGGS 1220 ALG A SA H+C +L+DGSVKCWG N GQLG D + RG + MGD LPAV LG SA+ V + G C L GG VKCWG N GQLGLG+ +RG ++ DMG NLP VNLGTG A ++ G + CAVL G +KCWG ND GQLGLGD NRG MGDNLP+V+LG G T V+ G HTCAV+ D +KCWG N GQLG D RGT A MG LP V+LG A V HTCA+L G +KCWG S Sbjct: 379 ALGTAKTAVAVSAAGEHTCAVLNDGSVKCWGNNDSGQLGLGDTLSRGGDTAQMGDSLPAVALGTGQ-SAIAVSAAGGHTCVLLNGGSVKCWGYNTYGQLGLGSPASRG--TSPSDMGNNLPAVNLGTGKTATLVSAGSQYTCAVLNDGSVKCWGNNDYGQLGLGDTFNRGTGSTSMGDNLPVVNLGTGKTATLVSAGGRHTCAVLNDSTIKCWGYNSSVGQLGLGDTASRGTS--AAQMGNNLPAVNLGTSVSATLVDTSADHTCALLGAGNLKCWGAS 652
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO) HSP 1 Score: 258 bits (659), Expect = 1.260e-76 Identity = 144/266 (54.14%), Postives = 165/266 (62.03%), Query Frame = 3 Query: 426 GSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRG-GPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWGGS 1220 G H+C LL DG VKCWG N GQLG D RG MGD LPAV LG + V + +G CAL GGG VKCWG N GQLGLG+ RG GP +MG LPTVNLGTG A I G H CA+L G +KCWG N G+LGLGD RGD EMGD L VDLG G ++++G H CA++ DG VKCWG N GQLG DA RG +GAG MG LP VDLG + A+AV AG FHTCA+L G +KCWGG+ Sbjct: 199 GYDHACALLHDGRVKCWGRNVQGQLGLGDTEPRGDAADEMGDALPAVDLGT-GVTVVGLAAGDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGPG---EMGDALPTVNLGTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRG--DGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLKCWGGN 458
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 254 bits (649), Expect = 1.330e-76 Identity = 139/277 (50.18%), Postives = 169/277 (61.01%), Query Frame = 3 Query: 387 ALGEVPVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRG-GPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 ALG +A SAG H+C LLD+GS+KCWG N GQLG D RG MGD LPA+ LG +A + GG CAL G VKCWG N GQLGLG+ RG GP +MG LP + LGTG A I++GG H CA+L G +KCWG N GQLGLGD +RGD EMGD LP + LG G +++ G HTCA++ +G VKCWG N GQLG D R +G G MG LP V LG + A A++AG++HTCA+L G +KCWG Sbjct: 97 ALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGR-TATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPG---EMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRS--DGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWG 367
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A017T228_9DELT (BNR repeat domain protein n=1 Tax=Chondromyces apiculatus DSM 436 TaxID=1192034 RepID=A0A017T228_9DELT) HSP 1 Score: 249 bits (637), Expect = 9.940e-75 Identity = 140/271 (51.66%), Postives = 170/271 (62.73%), Query Frame = 3 Query: 414 AASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGA-PSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRG-GPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLG--RDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 A +AG SH+C LLDD SVKCWG N +G+LGQ D RG MGD LP + G+ P+ +A+ V G CAL G VKCWG + G+LGLG +RG GP +MGA LPTV+LGTG A+ IA+GG H CA+L +KCWG N RGQLGLGD +RG EMGD+LP+VDLG G ++A G HTCA++ DG +KCWGN G+LG D RG + G MG L +DLG Q I V AG FHTCA L G +KCWG Sbjct: 128 AIAAGGSHTCALLDDTSVKCWGSNAFGELGQGDVASRGDAPGEMGDALPPIDFGSGPAVTALSV--GYRHACALFSDGSVKCWGSGQGGRLGLGTTTSRGDGPG---EMGAALPTVDLGTGHTAKAIAVGGFHTCAILDDDSVKCWGANGRGQLGLGDLASRGAAAGEMGDDLPIVDLGTGRTAVAIATGNEHTCALLDDGALKCWGNGFNGRLGTGDQEHRG--DDPGEMGDALLAIDLGLGAGQTVIGVTAGDFHTCARLTGGAVKCWG 391
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A0K1EC22_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EC22_CHOCO) HSP 1 Score: 245 bits (625), Expect = 2.890e-73 Identity = 134/275 (48.73%), Postives = 169/275 (61.45%), Query Frame = 3 Query: 390 LGEVPVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRGGPSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWG 1214 LG V A +AG H+C LL G VKCWG+N +GQLG D RG MG+ LP V LG +AV + +G CAL G VKCWG N GQLGLG+ E RG +DDMG LP V+LG G +A G H CA+LRGG +KCWG N QLG+GD +RG EMG+ LP VDLG G V ++A G+ HTCA++ +G +KCWG ND QLG+ED++ G A MG LPVV++G + V AG +HTCA + +GV++CWG Sbjct: 90 LGRDREVVAVAAGGGHTCALLRGGDVKCWGDNRFGQLGLGDSRSRGDGPGEMGNRLPVVDLGRGK-TAVALVAGWAHTCALLSEGTVKCWGENRFGQLGLGDVEHRG--DDADDMGDALPEVDLGAGAEVVSLAAGSAHTCALLRGGEVKCWGYNGYYQLGIGDYGDRGGAEGEMGNRLPRVDLGTGQVAVALAAGQDHTCALLREGKLKCWGTNDARQLGFEDSMY--AGGSAKTMGDNLPVVEVGAGEVIARVVAGSYHTCAQMVSGVVRCWG 359
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Match: A0A0K1EC39_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EC39_CHOCO) HSP 1 Score: 245 bits (625), Expect = 5.280e-73 Identity = 141/278 (50.72%), Postives = 172/278 (61.87%), Query Frame = 3 Query: 390 LGEVPVVSAASAGSSHSCVLLDDGSVKCWGENFWGQLGQNDDVVRGKNNLTMGDLLPAVPLGAPSFSAVYVDSGGEFNCALNGGGGVKCWGRNELGQLGLGNNETRGG-PSTSDDMGANLPTVNLGTGVIAEKIALGGMHACAVLRGGGLKCWGRNDRGQLGLGDKLNRGDDVNEMGDNLPLVDLGPGVVVTSVALGEVHTCAVIGDGDVKCWGNNDGGQLGYEDALPRGTGEGAGVMGAGLPVVDLGRDQRAIAVAAGFFHTCAMLYTGVIKCWGGS 1220 LG V A +AGS H C LL G VKCWG N G LG D RG + +MG+ LP V LG +AV + +GGE NCAL +KCWG N GQLGLG+ RG P T MG +LP V+LG + +G H CA+L G +KCWG N GQLGLGD +RGD EMGD LP VDLG G +V ++ALG +H+CA++ DG VKCWG+N+ GQLG D RG + G MG LP VDLG +RA+A+ AG HTCA+L G +KCWG S Sbjct: 119 LGTGETVEALAAGSFHHCALLRGGRVKCWGGNASGSLGLGDGEGRGLDVGSMGENLPTVDLGT-GVTAVALVAGGETNCALLPDRTLKCWGDNGYGQLGLGDVTPRGNLPGT---MGDDLPAVDLGVDGAGTAVFMGAAHVCALLTRGAVKCWGANGHGQLGLGDADHRGDAPGEMGDALPDVDLGAGNLVAALALGRMHSCALLKDGSVKCWGDNERGQLGLGDTELRG--DAPGEMGDALPRVDLGSGKRAVAITAGDLHTCALLDDGSLKCWGDS 390 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11579.1374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11579.1374.1 >prot_L-elsbetiae_contig11579.1374.1 ID=prot_L-elsbetiae_contig11579.1374.1|Name=mRNA_L-elsbetiae_contig11579.1374.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp MESPAARLVCADRRRRRRRNHHCSSSSSGSSGSGSSRDPAACRRRPAGQLback to top mRNA from alignment at L-elsbetiae_contig11579:1329..3144+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11579.1374.1 ID=mRNA_L-elsbetiae_contig11579.1374.1|Name=mRNA_L-elsbetiae_contig11579.1374.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1816bp|location=Sequence derived from alignment at L-elsbetiae_contig11579:1329..3144+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11579:1329..3144+ >mRNA_L-elsbetiae_contig11579.1374.1 ID=mRNA_L-elsbetiae_contig11579.1374.1|Name=mRNA_L-elsbetiae_contig11579.1374.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2208bp|location=Sequence derived from alignment at L-elsbetiae_contig11579:1329..3144+ (Laminarionema elsbetiae ELsaHSoW15)back to top |