mRNA_L-elsbetiae_contig11575.1369.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: D7G3E4_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E4_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.390e-23 Identity = 64/105 (60.95%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 266 KRNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLIGHQVGRAIAMTVVREGKDGGSSQLREAQSGPAPPP----------LRLTVVTESDLPRPP 550 K + + ILSVTPGGAADRAGLRFGD+ITEFDGKAVT+TTEVLQLIGHQVGRAI MTVV + P PP +TVVTESDLPR P Sbjct: 379 KSSGVMILSVTPGGAADRAGLRFGDLITEFDGKAVTTTTEVLQLIGHQVGRAIPMTVVAA---------IPPVADPGHPPEXXXXXXXXXXXVTVVTESDLPRSP 474
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A7S3C051_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C051_9VIRI) HSP 1 Score: 63.5 bits (153), Expect = 5.510e-10 Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 293 VTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLIGHQVGRAIAMTVVREG 448 V PG A+RAG+R GDV+ EFDGKAVTS+ +++ +G++V A A+TVVR G Sbjct: 29 VAPGSPAERAGVRPGDVVVEFDGKAVTSSEQIIDRLGYRVHEAFALTVVRRG 80
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A2V8EF40_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8EF40_9BACT) HSP 1 Score: 61.2 bits (147), Expect = 1.020e-7 Identity = 29/65 (44.62%), Postives = 48/65 (73.85%), Query Frame = 2 Query: 263 QKRNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVL-QLIGHQVGRAIAMTVVREGKD 454 + R+ + SV PGGAAD+AG++ GDVITEF+G+AV +TT++ Q+ + G ++++ V+R GK+ Sbjct: 336 KSRSGALVSSVAPGGAADKAGIKPGDVITEFNGRAVNNTTDLQKQVTATKPGTSVSLKVIRNGKE 400
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A3N1CRK3_9ACTN (S1-C subfamily serine protease n=2 Tax=Actinocorallia herbida TaxID=58109 RepID=A0A3N1CRK3_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 1.120e-7 Identity = 28/75 (37.33%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 230 ITLLRTPASCSQKRNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLIGH-QVGRAIAMTVVREGK 451 +T+ +T S +++ + +++VTPGGAA++AG++ GDVIT DG+A STT + +++ QVG+ + + + R+G+ Sbjct: 254 VTIAQTVNISSGEQDGVAVVAVTPGGAAEQAGIKTGDVITAVDGQATDSTTGLAEILAERQVGQTVPVEIRRDGE 328
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A4Q3V036_9BACT (PDZ domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3V036_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 9.800e-7 Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 2 Query: 263 QKRNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLI-GHQVGRAIAMTVVREGK 451 + + +KI SVTPG AAD+AGLR GDVIT+FDGK++ S + + + G + + + R+GK Sbjct: 119 EAKGGVKINSVTPGSAADKAGLRAGDVITKFDGKSIASPQALYEAVTGRKANEVVKINYDRDGK 182
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A498K2Z3_MALDO (PDZ domain-containing protein n=2 Tax=Malus TaxID=3749 RepID=A0A498K2Z3_MALDO) HSP 1 Score: 58.2 bits (139), Expect = 1.080e-6 Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 2 Query: 269 RNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLIGHQVGRAIAMTVVREGKD 454 + I + VTPG A+RAG R GDV+ EFDG AV S E+++++G +VG I + V+R D Sbjct: 345 KKGILVPMVTPGSPAERAGFRPGDVVIEFDGNAVGSIKEIIEIMGDRVGVPIGVVVIRARDD 406
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: M5VZD5_PRUPE (PDZ domain-containing protein n=8 Tax=Prunus TaxID=3754 RepID=M5VZD5_PRUPE) HSP 1 Score: 57.4 bits (137), Expect = 1.980e-6 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 2 Query: 269 RNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLIGHQVGRAIAMTVVR 442 + I + VTPG A+RAG R GDV+ EFDGKAV S E+++++G +VG I + V R Sbjct: 341 KKGILVPMVTPGSPAERAGFRPGDVVIEFDGKAVESIKEIIEIMGDRVGVPIKVVVKR 398
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A2M8LX44_9ACTN (Protease n=1 Tax=Streptomyces carminius TaxID=2665496 RepID=A0A2M8LX44_9ACTN) HSP 1 Score: 57.4 bits (137), Expect = 2.160e-6 Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 293 VTPGGAADRAGLRFGDVITEFDGKAVTS-TTEVLQLIGHQVGRAIAMTVVREGKD 454 VTPGG AD+AGLR GDVIT+FDG A+ S T + ++ H+ G + +T R+GK+ Sbjct: 484 VTPGGPADKAGLRAGDVITKFDGVAIDSGPTLISEIWAHEPGEKVTLTYERDGKE 538
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A7S3K1W3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1W3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.560e-6 Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 269 RNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLIGHQVGRAIAMTVVREGKDGGSSQLREAQSGPAPPPLRLTVVTESDLP 541 + + I + P AD+AG++ GD+I EFDGK V+ ++L IG + + I++T++R D S L+ + +P L+L+++TES P Sbjct: 288 QQKVLIAQIVPHSPADKAGIKPGDIILEFDGKPVSGVPDILAAIGLEGQQQISVTILRSNDDS-SGGLQSS----SPQKLQLSILTESQAP 373
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Match: A0A6V8NHI9_9DELT (Periplasmic serine endoprotease DegP-like n=1 Tax=Geomonas limicola TaxID=2740186 RepID=A0A6V8NHI9_9DELT) HSP 1 Score: 57.0 bits (136), Expect = 2.810e-6 Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 101 VRLDLTSPLSLPQFLGTK*VGIHAYIGVPVRI*FSMIFDSYIHITLLRTPASCSQKRNNIKILSVTPGGAADRAGLRFGDVITEFDGKAVTSTTEVLQLI-GHQVGRAIAMTVVREGK 451 + +DL + LPQ K V Y+GV V+ + +S+ + R + + V PG A++AGLR GD+I EFDGKAV TE+ +L+ G VG+ + + ++R+GK Sbjct: 252 IPIDLVKSI-LPQLQQGKKVT-RGYLGVNVQTVTDDLANSF----------GLDEARGAL-VAEVVPGSPAEKAGLRAGDIILEFDGKAVRDMTELPRLVAGTAVGKTVQLKLLRDGK 356 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11575.1369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11575.1369.1 >prot_L-elsbetiae_contig11575.1369.1 ID=prot_L-elsbetiae_contig11575.1369.1|Name=mRNA_L-elsbetiae_contig11575.1369.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp MIFDSYIHITLLRTPASCSQKRNNIKILSVTPGGAADRAGLRFGDVITEFback to top mRNA from alignment at L-elsbetiae_contig11575:4178..5032- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11575.1369.1 ID=mRNA_L-elsbetiae_contig11575.1369.1|Name=mRNA_L-elsbetiae_contig11575.1369.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=855bp|location=Sequence derived from alignment at L-elsbetiae_contig11575:4178..5032- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11575:4178..5032- >mRNA_L-elsbetiae_contig11575.1369.1 ID=mRNA_L-elsbetiae_contig11575.1369.1|Name=mRNA_L-elsbetiae_contig11575.1369.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig11575:4178..5032- (Laminarionema elsbetiae ELsaHSoW15)back to top |