mRNA_L-elsbetiae_contig11556.1356.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI) HSP 1 Score: 109 bits (273), Expect = 1.940e-25 Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP*GRREAKGAAKG 262 MLNST CATT TMSCILENYQTP GV VPEVLVP+MGG+TFLDY KELP G+REAKGA KG Sbjct: 388 MLNSTLCATTRTMSCILENYQTPTGVTVPEVLVPFMGGITFLDYVKELPKGKREAKGATKG 448
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A836CAY7_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.580e-17 Identity = 41/64 (64.06%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP*GRREAKGAAKGLTP 271 MLN+T CATT T+SCILEN+QTP GV VP LVPYMGG F+ + KELP EAKG KG P Sbjct: 392 MLNATLCATTRTLSCILENFQTPDGVRVPPALVPYMGGKDFIPFVKELPAALVEAKGVTKGGMP 455
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: L8GI72_ACACA (Serine--tRNA ligase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GI72_ACACA) HSP 1 Score: 81.3 bits (199), Expect = 1.660e-15 Identity = 44/77 (57.14%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 35 VRAEGRRADGEGVRA-MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP*GRREA-KGAAK 259 VR R+ GE MLN+T CATT T+ CILENYQTP GVAVP+VL PY+GGL F+ + KE P EA KG K Sbjct: 375 VRCGSRKQGGEKKYVHMLNATLCATTRTICCILENYQTPEGVAVPKVLQPYLGGLEFIPFVKEAPKKHEEAVKGKEK 451
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A485L5N7_9STRA (Serine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N7_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.290e-15 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP*GRREAK 247 +LN+T CATT T+SCILEN+QTP GV VPEVLVP+MGG+TFL + +E P +E K Sbjct: 393 LLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVQEAPVNLQEKK 448
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A196SFB0_BLAHN (Seryl-tRNA synthetase (Fragment) n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SFB0_BLAHN) HSP 1 Score: 73.2 bits (178), Expect = 5.190e-14 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP 226 MLNST CA T T+ CILENYQTP G+ +PE L+PYM G+TFL + + +P Sbjct: 79 MLNSTLCALTRTLCCILENYQTPEGIQIPEKLLPYMDGITFLPFKRPIP 127
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A024TCC2_9STRA (Serine--tRNA ligase n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCC2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 7.110e-14 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKE 220 +LN+T CATT T+SCILEN+QTP GV VPEVLVP+MGG+TFL + E Sbjct: 393 LLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVNE 439
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A1Y2FS58_PROLT (Serine--tRNA ligase n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FS58_PROLT) HSP 1 Score: 75.1 bits (183), Expect = 2.300e-13 Identity = 35/48 (72.92%), Postives = 36/48 (75.00%), Query Frame = 2 Query: 83 LNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP 226 LNST CAT + CILENYQTP GV VPEVL PYMGG TFL Y K LP Sbjct: 356 LNSTLCATERALCCILENYQTPDGVIVPEVLRPYMGGKTFLPYTKPLP 403
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A6G0XJV5_9STRA (Serine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJV5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.480e-13 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKE 220 +LN+T CATT T+SCILEN+QTP GV VP+VLVP+MGG+TFL + E Sbjct: 393 LLNATLCATTRTISCILENFQTPEGVRVPDVLVPFMGGVTFLPFVHE 439
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A7S3Y3E5_HETAK (Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3E5_HETAK) HSP 1 Score: 75.1 bits (183), Expect = 2.570e-13 Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP*GRREAKGAAK 259 MLN+T CATT T+ CILENYQT GV VPEVLVPYMGG TFL + E + +GA K Sbjct: 392 MLNATLCATTRTICCILENYQTETGVRVPEVLVPYMGGTTFLPFIWEDKLASKGERGAQK 451
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Match: A0A5A8E5A5_CAFRO (Serine--tRNA ligase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E5A5_CAFRO) HSP 1 Score: 74.7 bits (182), Expect = 3.640e-13 Identity = 38/61 (62.30%), Postives = 43/61 (70.49%), Query Frame = 2 Query: 80 MLNSTQCATTSTMSCILENYQTPRGVAVPEVLVPYMGGLTFLDYAKELP*GRREAKGAAKG 262 MLNST CATT T+ ILENYQTP GV VPE LVPYMGG TFL + + P A+ +AKG Sbjct: 412 MLNSTLCATTRTICAILENYQTPDGVKVPEALVPYMGGTTFLPFVRPKP-KNINAEKSAKG 471 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11556.1356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11556.1356.1 >prot_L-elsbetiae_contig11556.1356.1 ID=prot_L-elsbetiae_contig11556.1356.1|Name=mRNA_L-elsbetiae_contig11556.1356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp MYIHRAAGWRCSPGRRKTGRWRRSTRNAELDAVRDDQHNVVHPRELPDPEback to top mRNA from alignment at L-elsbetiae_contig11556:397..1083+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11556.1356.1 ID=mRNA_L-elsbetiae_contig11556.1356.1|Name=mRNA_L-elsbetiae_contig11556.1356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=687bp|location=Sequence derived from alignment at L-elsbetiae_contig11556:397..1083+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11556:397..1083+ >mRNA_L-elsbetiae_contig11556.1356.1 ID=mRNA_L-elsbetiae_contig11556.1356.1|Name=mRNA_L-elsbetiae_contig11556.1356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig11556:397..1083+ (Laminarionema elsbetiae ELsaHSoW15)back to top |