mRNA_L-elsbetiae_contig1154.1351.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1154.1351.1
Unique NamemRNA_L-elsbetiae_contig1154.1351.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 1.090e-118
Identity = 243/593 (40.98%), Postives = 325/593 (54.81%), Query Frame = 3 
Query:  501 VKKSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHYR----PRRSRRSY---TSGYDDXXXXXXXXXXPPTPSGGRSFWATDGETAPASTTIGDETGDGRYAPAGSGSGNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGG------DDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPPGEIPLGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPP------VDNPDLLRGAEVDRVCL---GNVEACEEVQK----KSVLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLNKEASAQA-SLRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGDRRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRVA--MRSKSVHRDIRIQ 2192
            +KKSCDFC +R++ CDG+A+RRCSFCI   +PECHY     P +S+      TSG +D            +PS G S  A       A+   G +    +   +G+  G   ++LP KR+R SASPATGL GL EN+ L DFFGCLGFLSL +ES +RGA+V VM  +     Q   GA  P+RP             D  +          + W NA+  +    ALPRD+ TC+LWCAIALGALVRG+PL HV RYV LA+++L +    A L  ARA +AMA +HNFLG+QV ++ YV++ANSIV  LPP ++ LG  +LL+ AG +W  E  LAS  + + YW     IW+L + VVE+D+C  +LAV+ RV+Q  L +          Q+     A  A+ P        D+ +   G  VD       G +            K  +PE+LR    F+  + M+ GLG LLYYG L +LQ L+ E +A   S  R    L+RYPGLCRYN   H  H  L        R  YEAL+ +YN +RP    PAPP++EW GMSD+CD PYCR VA  M +      +++Q
Sbjct:  100 LKKSCDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSLPSKSKTPTVVPTSGEEDAVRDD-------SPSPGLSLRARAEVDNDANADTGAQH-TAKKKGSGTAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVMRANNVLIQQ---GATTPARPXXXXXXXXXXXXXDTEETPVSSVRTEEACWRNAVTTED--AALPRDASTCILWCAIALGALVRGYPLPHVQRYVHLAKDTLASCSASAALDMARANLAMAFVHNFLGDQVNNHRYVELANSIVSALPPVQVTLGVYDLLRYAGKSWVFEVGLASKKDIDAYWQSVAPIWKLPEKVVEQDICGLVLAVDTRVDQLVLADAPGTPAAEGLQRSSDATAGAASRPSPLTYGEADDAEGKMGGFVDAPLPTKEGGLAPPHPTDPFLGMKEAMPELLRANS-FLSRAKMQSGLGSLLYYGNLCFLQALDNEIAASVGSFHRSVSALLRYPGLCRYNSLSHNVHTQLWGLANARRREQYEALRAAYNPMRPARLSPAPPFEEWTGMSDICDHPYCRNVAEQMSAAFARHFVKVQ 678
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: D8LSE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.750e-88
Identity = 220/613 (35.89%), Postives = 288/613 (46.98%), Query Frame = 3 
Query:  684 PPTPSGGRSFWA---------TDGETAPASTTIGDETGDGRYAPAGSGSGNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGG------DDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVG-------------------------------------------------------------------------------RYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPPGEIPLGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLP-PV-----DNPDLLRGAEVDRVC------LGNVEACEE-VQKKSVLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLNKEASAQA-SLRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGDRRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRVA--MRSKSVHRDIRIQ 2192
            PPT   G SFWA          D  T P +   G ET  G             ++LP KR+R SASPATGL GL EN+ L +FFGCLGFLSL +ES VRGA+V VM  S     +   GA  P+RPR    G       D  +          + W  A+  +    ALPRD+ TC+LWCAIALGALVRG+PL HVG                                                                               RYV LA ++L +    A L  ARA +AMA +HNFLG+QVK++ YV++ANSIV  LPPG++ LG  +LL+ AG +W  E  LAS  + + YW     IW+L + VVE+D+C  +LAV+ R++Q  L +          Q      A V++ P P+     D+ + + G  VD         L +    +  +  K  +PE+LR                GLL    L +LQ LN + +A A S  R    L+RYPGLCRYN   H AH  L        R  YEAL+ +YN +RP +  PAPP+DEW GMSD+CD PYCR VA  M +   H  +++Q
Sbjct:   23 PPT---GVSFWAGAEADNDANADTGTQPTAKKKGSETAVGVTG----------LVLPFKRARISASPATGLAGLLENELLGEFFGCLGFLSLATESIVRGAMVSVMRASNGLNQR---GATTPARPRPATDGAWLVEEDDTEEAPASSVRTEEACWRKAVTTED--AALPRDASTCILWCAIALGALVRGYPLPHVGGNSNAALWWLKQGAEGMSRQCWTPFSIGYVARNPSRYPFESCCRRRNKSATPLPTPVFLVLCSNELYAWPSSIAEQQVQRYVHLATDTLASCSASAALDIARANLAMAFVHNFLGDQVKNHRYVELANSIVSALPPGQVSLGVYDLLKYAGKSWVFEVGLASRKDIDAYWQSVSPIWKLPEKVVEQDICGLVLAVDTRIDQLVLADAPGTPAAEGLQSSSDATAEVSSRPSPLTYGEDDDAEGMMGGFVDAPLPTKEGGLASPHPTDPFLGMKEAMPELLRAN--------------GLLSRN-LCFLQALNNDIAASAGSFHRSVSALLRYPGLCRYNSLSHNAHTQLWGLANARRREHYEALRAAYNPMRPASLSPAPPFDEWTGMSDICDHPYCRNVAEQMSAAFAHHFVKVQ 602
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 4.230e-59
Identity = 199/635 (31.34%), Postives = 283/635 (44.57%), Query Frame = 3 
Query:  507 KSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHY--RPRRSRRSYTSGYDDXXXXXXXXXXPPTPSGGRSFWATDGETAPASTTIGDETGDGRYAPA------GSGS----------GNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAP----LPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQV---KSYEYVKVANSIVQVLPPGEIP--LGF----TELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVAT----LPPVDNPDLLRGAEVDRVCLGNV------------------EACEEVQKK---------------SVLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLNKE-ASAQASLRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGDRRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRVAMRSKSVHRDIRIQAPSA 2204
            KSC FC +RKRSCD + R RCS CI  NQP CHY  +P   R +                    P+  R         +  S + GD +   R A A      G+GS             R  + LKR R SASPATGL+G+QEN FL  FFGCLG L L +ESTVR A+V VM+     Q     G      L      G+ GG                   ALA +     LP     C++WCAIALGAL+RG P++ V  YV+LA+ESL    DG ++  ARAY+ M+ LH+ + ++    K+  Y+  A +IV  L P ++P  LG     T  L++         DL+++ +      E P + E    +   DV    LA +  + + F+ +             +S  A  A+     P  +N + + G     +  G V                  E    V ++                 LPEM  L +  + +S    G+GG+LY+G + Y++ +  E   A  SL  C +V++RYPGL R+    H  HC+L +   F  R  Y+A+K  YNSV P+  P APPY+EWR +  VC    CR + +       +  +QA +A
Sbjct:   56 KSCTFCAKRKRSCDSR-RPRCSLCIEKNQPHCHYPLKPLPKRAAAK------------------PTAARRLXXXXXXXSDCSISSGDASKAKRLAEAHEVASYGAGSVLATVDTRSMPTVRGRMSLKRCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSRTGGSGMEGLAEDEEKGWCGG------------------GALARRH---TLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIMSFLHSIIHDKAIDDKNERYLSFAVNIVSKLRPEDVPKELGLMLVTTNKLRVCPCNPQPGDDLSTSCDEAV---ELPRVREAQHPLTPTDVSNAFLAADSLITRAFVAD------------MMSAGAITASGGGAAPHEENGEPVLGGSYRELGGGGVMEEGGKREWNAGVTWEGEELANRVHREPDVPPAGPAMKLLIQEALPEMTSLAKT-LESSDTCSGVGGVLYHGNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFKS--HLIHCMLAASHFFNRRDMYDAMKRVYNSVGPMGYPQAPPYEEWRTIRQVCPHILCRSLEVELHQHLDEGLVQANAA 632
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.260e-58
Identity = 192/629 (30.52%), Postives = 283/629 (44.99%), Query Frame = 3 
Query:  507 KSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHY--RPRRSRRSYTSGYDDXXXXXXXXXXPPTPSGGRSFWATDGETAPASTTIGDETGDGRYAPAGSGSG----------NERML------LPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDXXXXXXXXGGSRW--SNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPPGEIP--LGF----TELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVDNPDLLRGAEVDRVCLGNVE------------AC--EEVQKKS-------------------VLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLNKEASAQ-ASLRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGDRRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRVAMRSKSVHR----DIRIQAPS 2201
            KSC FC +RKR+CD Q R RCS CI   QP CHY  +P   R +                    P+  R   ++   ++  S + GD +   R A A  G+           N R +      + LKR R S+SPATGL+G+ EN FL DFFGC G L L +ESTVR A+V VM+     Q                   G  G             W    ALA +     LP     C++WCAIALGAL+RG  ++HV  YV+LA +SL    DG ++  ARAY+ M+ LH  +G++ K+  Y+  A +IV  L P ++P  LG     T+ L+++        DL+++ +      E P + E    +   DV    L  +  ++Q F+ + T      A              P  +  + + G     +  G V             AC  EE+  +S                    LPEM  L +  + +S    G+GG+LY+G + Y++ +  +      SL+ C +V++RYPGL R+    H  HC+L +   F  R  Y+A++  YNSV P+  P  PPY+EWR +  VC    CR  +M ++ + R     ++  APS
Sbjct:   56 KSCTFCAKRKRACDSQ-RPRCSLCIEKKQPYCHYPLKPLPKRAAAK------------------PAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGVLATVNTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFGILPLTTESTVRNAMVEVMMRQCGGQ----------------AYSGTGGSGMEGLAEDEEKDWHGGGALARRH---TLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFAVNIVSKLRPEDVPKELGLMLMTTDKLRVSACNPQPGDDLSTSCDEA---LELPQVREAQHPLTPTDVTNVFLVADGLLSQAFIADMTSAGAIPASGG--------GAAPHEEKGEPVLGESYRELGGGGVMEEGGKQVRSAGVACDDEELANRSHREPDVPPTGPAMKRFAREALPEMTSLAKT-LESSDTCSGVGGVLYHGNVAYMRAIAGDLDKSFESLQACVDVVLRYPGLVRFRS--HLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVMCR--SMEAERLQRYGEGPVQTNAPS 630
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 3.230e-51
Identity = 191/594 (32.15%), Postives = 269/594 (45.29%), Query Frame = 3 
Query:  507 KSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHY--RPRRSRRSYTSGYDDXXXXXXXXXXPPTPSGGRSFWATDGETAPASTTIGD----ETGDGRYAPAGSGSGNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPPGEIP------LGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVDNPDLLRGAEVDRVCLGNVE------------ACEEVQ---------------------KKSVLPEMLRLE---EEFIGNSAMRLGLGGLLYYGELGYLQLLNKE-ASAQASLRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGDRRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYC 2141
            KSC FC +RKR+CD Q  R    CI  NQP CHY  +P   R +       XXXXXXXXX   + S G +  A     AP   + G      T D R  P        R  + LKR R S+SPATGL+G+ EN FL DFFGCLG L L +ESTVR A+V VM+     Q     G         G  G  + +         G R   ALA +     LP     C++WCAIALGAL+RG P++ V  YV+LA+ESL    DG ++  ARAY+ ++ LH     + K+  Y+ +A +I   L P ++P      L  T+ L+++        DL+++ +      E P + E    +   DV    LA +  ++Q F+ + T      A  +           P  +N +   G     +  G V             AC++ +                      +  LPEM  L    E F+   A R  +   +    + Y++ +  E   A  SL  C +V++RYPGL R+    H  HC+L +   F  R  Y+A++  YNSV P+  P  PPY+EWR +  VC    C
Sbjct:   56 KSCTFCAKRKRACDSQKPRCRVLCIEKNQPHCHYPLKPLLKRAAAKPTAAXXXXXXXXXXSDCSISSGDASKAKRLAEAPEVASYGTGGVLATVDTRSMPT------VRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVMMRQCGGQVYSGTGG-------SGMEGLAEDEEK-------GWRGGGALARRH---TLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIVSFLH-----RGKNERYMSLAVNIASKLRPEDVPKELWLMLMTTDNLRVSACNPQPGDDLSTSCDEA---LELPQVREAQHPLTPTDVSNVFLAADSLLSQAFVADMTSAGAITASGR--------GAAPHEENGEPALGDSYRELGGGGVMEEGGKQVRSAGVACDDEELANRLHREPDVPPTGPAMKRFAREALPEMTSLAKTLERFVPTRA-RASVVFSITGDNVAYMRAVAGELVKAFESLEACVDVVLRYPGLVRFRRTSHLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQVPPYEEWRTIRQVCPHILC 609
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: D7FTC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC3_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 6.190e-49
Identity = 143/463 (30.89%), Postives = 214/463 (46.22%), Query Frame = 3 
Query:  819 LLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPPGEIPLGF--TELL-----QLAGFAWAMETDLASA----VETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPF----LDETTV--DHWFVAKQQQLSQKAPVATLPPVDNPDLLRGAEVDRVCLGNVEACEEVQKKSVLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLN-KEASAQASLRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGDRRGYEALKVSYNSVRPVASPP-APPYDEWRGMSDVCDRPYCRRV 2150
            ++PLKR+R S SPATGLIGL+EN ++ DFF  +GFL + SES +R A+V  M  +   +    PG      P  G V G            G       + A+S   A+   +  CVLW  + +G L+RG P   V  YV LA+E+L    D  T  TARA+ AMA+  +F+G + K  +Y+  A SI+  LPP ++P     T L       L G++  ++ +   A    +E+     E  LI +       +D+C +LL  ++R+   F    LD+     D   V   +   Q       PP     L   AE+   C   V A +  + K                     G+G L ++  + Y  +L  +++ A   L RCA++ +  PG+CR   W H AHC L   ++ G    YE+L+ +YNSV    S    PP +EW GM  +C   +CR +
Sbjct:   27 MIPLKRARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSESFIRKAMVSTMFRTMQERDPEFPG------PEAGGVVGGGHGWGESALVPGXXXXXXLVRAES---AVENAAAACVLWSTVGVGCLIRGRPKSSVEGYVHLAREALSVCFDDGTAETARAFTAMALFQDFMGNEDKFIKYIDFAKSIINALPPEKVPADLLDTHLFVKACDMLEGYSHQVDEEYIKAASGTLESCAMAKEPRLIHQ-------KDLCRWLLKADIRLTACFSVDMLDKGAFNEDSSDVGSLRSFDQSTEP---PPPGEMSLKFAAELLPECDLMVHATQTPEVKG--------------------GVGELYFHSIMAYANVLQGRQSWAMDGLWRCADIFLTSPGICRLTAWTHLAHCTLACLLLSGRHEKYESLRQAYNSVMDEPSAVRVPPAEEWTGMECICKHVFCRSL 450
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 6.460e-48
Identity = 154/464 (33.19%), Postives = 220/464 (47.41%), Query Frame = 3 
Query:  819 LLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGAT-LGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPP----GEIPLGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVDNPDLLRG-AEVDR-------VCLGNV-EACEEV--QKKSVLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLNKEASAQAS-LRRCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGD---RRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRV 2150
            +LPLKR R SASPATGL+G+QEN FL+DFFGC+GF+ L S S +R  +V +M   ASP       APL  +  +G    + G             W+ A         LP D+ TC  WCAIALGAL +G P++ V +Y  LA E+L   +  +T    A A+  +A ++ F+G+  +  EY+ ++ S ++          +PLGF E++       A         ET     E  +  ++AD   E ++  +                 V H F A +Q   QKA + +   VD P    G  E DR          G + EA   V   +  ++ E L   EE +   ++R G+G LL  G L + +    +  A    + RC EV   YPG+CR  I  H AH +L      GD   R  Y+ L+ SYNS RP  S P PP++EW+G+   CD  YCR +
Sbjct:  105 MLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIM---ASP-------APL-QQSAIGGACSEVGTMVRAPC------WNEASERNQ----LPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKGFVNTLPLGFAEVVLPVKIPNAS----CGQWETKSLDAEEYVPPQVADVAAEGELYKY-----------------VAHSFKAFEQAFQQKAYMQSARDVDTPGEAEGHGESDRNRWPASAFLPGEISEAMGTVFGDRNLLVFEPL---EEAVDRPSIRGGIGSLLINGTLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAM 523
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 3.160e-46
Identity = 168/593 (28.33%), Postives = 253/593 (42.66%), Query Frame = 3 
Query:  501 VKKSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHYRPRRSRRSYTSGYDDXXXXXXXXXXPPTPSGGRSFWATDGETAPASTTIGDETGDGRYAPAGSGSGNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAP--LPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSI----VQVLPPGEIPLGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVDNP-DLLRGAEVDRVCLGNVEACEEVQKKSVLPEMLRLEE-----EFIGNSAMRLGLGGLLYYGELGYLQLLNKEASAQAS-LRRCAEVLIRYPGLCRYNI-WFHYAHCLLHSCVMFGDRRG---YEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRVAMRSKSVHRDIRIQAPSALGSGAGRQ 2228
            ++KSC  C R+KR CDG     CS C+      C Y  R+                     P  P  GR          PA    G +T D  + P+ SG+     +LPLKR + SASPATGL+G+QEN FL+DFFGC+GF+   S S +RGA+V +M  S +   QH PGA    P + + G    +DG         G S                     C  WCA+ +GAL +G P++ V  Y  LA++++  +        A A+  +   + F+G+     EY+K+++S     ++    G +P GF E++           ++  AV+T  +        ++  +  E DV  F+               +V+ +     ++   K    +    D P +  RG   D    GN    EE+    V    + L +     E +    +R G+GG L    L + +  N +A      +  C EVL RYPG+CR+ + W H  H  L +     D R    Y  L+ +YN  RP AS PAPP + W+G+S  CD  +C        S    +    P +  +GAG Q
Sbjct:   18 MRKSCGACGRKKRKCDGLMP--CSRCLRAGV-RCTYSKRK---------------------PHQPQLGRQHQRRP--RGPA----GVQTAD-MFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTA---QHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTGPS--------------------CCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNV-DAVDTGSFTRHQDRP-QINPAATEEDVFRFVAQ-------------SVEAFVQLVVEEACGKRATRSCSSDDGPYEEDRG---DASPHGNAPRVEEISDAMVTGFKIGLLDFENLQEAVDLPNVRTGMGGFLINMNLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHCMLFGGVIASERLSVFTTPPYSSRNGAGFQ 538
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.050e-45
Identity = 173/594 (29.12%), Postives = 261/594 (43.94%), Query Frame = 3 
Query:  501 VKKSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHYRPRRSRRSYTSGYDDXXXXXXXXXXPPTPSGGRSFWATDGETAPASTTIGDETGDGRYAPAGSGSGNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANS-IVQVLPPGE---IPLGFTELLQLAGFAWAMETDLASA-VETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVDNPDLLRGAEVDRVC---LGNVEACEEVQKKSV------LPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYLQLLNKEAS-AQASLRRCAEVLIRYPGLCR-YNIWFHYAHCLLHSCVMFGDRRG---YEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRR----VAMRSKSVHRDIRIQAPSALGS 2213
            +++SC  C R+KR CDG A   CS C+ +   +C Y  R+  +  T                             G     ST +   +  G    +G        +LPLKR R SASPATGL+G+QEN FL+DFFGC+GFL L + S +RG +V +M  S +P HQ       P + +   +  +DG          GS+ S      +GP A       C  WCA+ +GALV G P++ VG Y  LA+++L  +        A+A+  +   + F+G+     EY+ +++S +   +  G    +P GF E+++          +L +A ++  G     P   +   +  E DV  ++   +    Q   ++   +                AT+ P+ + +     E D  C    GN    EEV    V      L +   L+E  +  S +R G+GGLL    L   +    +A  A   LR C EV  RYPG+CR   +W H +H +L +     D R    Y+ L+  YN  R   S PAPP +EWRGMS  CD   CR     +A ++ SV     + A +  GS
Sbjct:   18 MRRSCCECGRKKRKCDGMAP--CSRCLRSGV-QCTYSKRKPHQPQTQHQHQRRPR--------------------GPACMPSTELLRHSSSGALQASG--------MLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAP-HQLGASYDSPEQCQFDAILTEDGITT-------GSQLS------TGPSA-------CTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPP--QANPAATELDVFRYVTQSHTAFEQLVFEKVCENS---------------ATIRPLSDDE---PCEDDGGCGSPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEA-VDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGS 538
[Close]
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 1.860e-43
Identity = 148/461 (32.10%), Postives = 205/461 (44.47%), Query Frame = 3 
Query:  819 LLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISESTVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDXXXXXXXXGGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVELAQESL-RTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQVLPPGE----IPLGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSVVERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVDNPDLLRGAEVDRVCLGNVEACEEVQKKSVLPEMLRLEEEFIGNSAMRLGLGGLLYYGELGYL--QLLNKEASAQASLR-------RCAEVLIRYPGLCRYNIWFHYAHCLLHSCVMFGD---RRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYCRRV 2150
            +LPLKR R +ASPATGL+G+QEN FL+DFFGC+GF+ L S S +R  +V +M   ASP       APL  +  +G   G  G             W+ A         LP D  TC  WCAIALGAL +G P++ V +Y  LA E+L +++   A    A A+  +A ++ F+G+  K  EY+ ++ S ++          +PLGF E++       A         ET     E  +  +LAD   E ++  ++                    F A +Q   QKA   +   V+ P             G  E   E  +    P  L L  E         G   LL +  L     + L  E +A+   R       RC EV   YPG+CR  I  H AH +L      GD   R  Y+ L+ SYNS RP  S P PP +EW+G+   CD  YCR +
Sbjct:    1 MLPLKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIM---ASP-------APL-QQSAIGGAFGGVGSMVRARC------WNKASEKPQ----LPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFLKSATAKRCTDTLPLGFAEVVLPVKIPNAS----CGQWETKSLDAEERVPPQLADVAAEGELYKYIAQS-----------------FKAFEQAFQQKAYKQSARDVETP-------------GETEGHGESDRNRRRPSAL-LPGEISEAMGTVFGDRNLLVFEPLEEAVDRTLVFEKAAKGDRRATLERIGRCVEVFELYPGMCRCTISHHKAHIMLVCLAAIGDSSARAMYDRLRGSYNSFRPAGSLPVPPLEEWQGVGAFCDDFYCRAM 405
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1154.1351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K678_9PHAE1.090e-11840.98Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LSE2_ECTSI1.750e-8835.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0W7_9PHAE4.230e-5931.34Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTE0_ECTSI1.260e-5830.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L0K0_9PHAE3.230e-5132.15Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTC3_ECTSI6.190e-4930.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYW4_9PHAE6.460e-4833.19Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5K8E7_9PHAE3.160e-4628.33Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JBJ1_9PHAE2.050e-4529.12Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU09_ECTSI1.860e-4332.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1154contigL-elsbetiae_contig1154:10764..22970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons13
Model size3625
Cds size1758
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815360.348094-UTR-L-elsbetiae_contig1154:10763..112541622815360.348094-UTR-L-elsbetiae_contig1154:10763..11254Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1154 10764..11254 +
1691682860.1144888-UTR-L-elsbetiae_contig1154:10763..112541691682860.1144888-UTR-L-elsbetiae_contig1154:10763..11254Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1154 10764..11254 +
1622815360.5898268-UTR-L-elsbetiae_contig1154:21594..229701622815360.5898268-UTR-L-elsbetiae_contig1154:21594..22970Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1154 21595..22970 +
1691682860.266476-UTR-L-elsbetiae_contig1154:21594..229701691682860.266476-UTR-L-elsbetiae_contig1154:21594..22970Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1154 21595..22970 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815360.3574302-CDS-L-elsbetiae_contig1154:11254..113341622815360.3574302-CDS-L-elsbetiae_contig1154:11254..11334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 11255..11334 +
1691682860.1244464-CDS-L-elsbetiae_contig1154:11254..113341691682860.1244464-CDS-L-elsbetiae_contig1154:11254..11334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 11255..11334 +
1622815360.3659-CDS-L-elsbetiae_contig1154:12713..129771622815360.3659-CDS-L-elsbetiae_contig1154:12713..12977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 12714..12977 +
1691682860.1355906-CDS-L-elsbetiae_contig1154:12713..129771691682860.1355906-CDS-L-elsbetiae_contig1154:12713..12977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 12714..12977 +
1622815360.4110155-CDS-L-elsbetiae_contig1154:14229..143371622815360.4110155-CDS-L-elsbetiae_contig1154:14229..14337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 14230..14337 +
1691682860.1518643-CDS-L-elsbetiae_contig1154:14229..143371691682860.1518643-CDS-L-elsbetiae_contig1154:14229..14337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 14230..14337 +
1622815360.460854-CDS-L-elsbetiae_contig1154:15243..155231622815360.460854-CDS-L-elsbetiae_contig1154:15243..15523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 15244..15523 +
1691682860.162233-CDS-L-elsbetiae_contig1154:15243..155231691682860.162233-CDS-L-elsbetiae_contig1154:15243..15523Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 15244..15523 +
1622815360.4708943-CDS-L-elsbetiae_contig1154:15966..160401622815360.4708943-CDS-L-elsbetiae_contig1154:15966..16040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 15967..16040 +
1691682860.177453-CDS-L-elsbetiae_contig1154:15966..160401691682860.177453-CDS-L-elsbetiae_contig1154:15966..16040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 15967..16040 +
1622815360.4837291-CDS-L-elsbetiae_contig1154:16483..165291622815360.4837291-CDS-L-elsbetiae_contig1154:16483..16529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 16484..16529 +
1691682860.1872854-CDS-L-elsbetiae_contig1154:16483..165291691682860.1872854-CDS-L-elsbetiae_contig1154:16483..16529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 16484..16529 +
1622815360.5013127-CDS-L-elsbetiae_contig1154:17216..172881622815360.5013127-CDS-L-elsbetiae_contig1154:17216..17288Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 17217..17288 +
1691682860.1957455-CDS-L-elsbetiae_contig1154:17216..172881691682860.1957455-CDS-L-elsbetiae_contig1154:17216..17288Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 17217..17288 +
1622815360.513792-CDS-L-elsbetiae_contig1154:18456..185671622815360.513792-CDS-L-elsbetiae_contig1154:18456..18567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 18457..18567 +
1691682860.2048821-CDS-L-elsbetiae_contig1154:18456..185671691682860.2048821-CDS-L-elsbetiae_contig1154:18456..18567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 18457..18567 +
1622815360.529075-CDS-L-elsbetiae_contig1154:18842..191351622815360.529075-CDS-L-elsbetiae_contig1154:18842..19135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 18843..19135 +
1691682860.2170987-CDS-L-elsbetiae_contig1154:18842..191351691682860.2170987-CDS-L-elsbetiae_contig1154:18842..19135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 18843..19135 +
1622815360.5435367-CDS-L-elsbetiae_contig1154:19611..196531622815360.5435367-CDS-L-elsbetiae_contig1154:19611..19653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 19612..19653 +
1691682860.2278209-CDS-L-elsbetiae_contig1154:19611..196531691682860.2278209-CDS-L-elsbetiae_contig1154:19611..19653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 19612..19653 +
1622815360.5544596-CDS-L-elsbetiae_contig1154:20299..204101622815360.5544596-CDS-L-elsbetiae_contig1154:20299..20410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 20300..20410 +
1691682860.2378523-CDS-L-elsbetiae_contig1154:20299..204101691682860.2378523-CDS-L-elsbetiae_contig1154:20299..20410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 20300..20410 +
1622815360.5694585-CDS-L-elsbetiae_contig1154:20719..208901622815360.5694585-CDS-L-elsbetiae_contig1154:20719..20890Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 20720..20890 +
1691682860.2458487-CDS-L-elsbetiae_contig1154:20719..208901691682860.2458487-CDS-L-elsbetiae_contig1154:20719..20890Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 20720..20890 +
1622815360.578463-CDS-L-elsbetiae_contig1154:21488..215941622815360.578463-CDS-L-elsbetiae_contig1154:21488..21594Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 21489..21594 +
1691682860.2538104-CDS-L-elsbetiae_contig1154:21488..215941691682860.2538104-CDS-L-elsbetiae_contig1154:21488..21594Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1154 21489..21594 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1154.1351.1prot_L-elsbetiae_contig1154.1351.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1154 11255..21594 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1154.1351.1

>prot_L-elsbetiae_contig1154.1351.1 ID=prot_L-elsbetiae_contig1154.1351.1|Name=mRNA_L-elsbetiae_contig1154.1351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=586bp
MSSVKKSCDFCVRRKRSCDGQARRRCSFCIVTNQPECHYRPRRSRRSYTS
GYDDDAAAAAAQASPPTPSGGRSFWATDGETAPASTTIGDETGDGRYAPA
GSGSGNERMLLPLKRSRFSASPATGLIGLQENQFLADFFGCLGFLSLISE
STVRGAIVGVMLTSASPQHQHHPGAPLPSRPRLGFVGGDDGDTGEGSSGT
GGSRWSNALAAKSGPVALPRDSPTCVLWCAIALGALVRGFPLDHVGRYVE
LAQESLRTFHDGATLGTARAYVAMAILHNFLGEQVKSYEYVKVANSIVQV
LPPGEIPLGFTELLQLAGFAWAMETDLASAVETNGYWNEAPLIWELADSV
VERDVCAFLLAVNMRVNQPFLDETTVDHWFVAKQQQLSQKAPVATLPPVD
NPDLLRGAEVDRVCLGNVEACEEVQKKSVLPEMLRLEEEFIGNSAMRLGL
GGLLYYGELGYLQLLNKEASAQASLRRCAEVLIRYPGLCRYNIWFHYAHC
LLHSCVMFGDRRGYEALKVSYNSVRPVASPPAPPYDEWRGMSDVCDRPYC
RRVAMRSKSVHRDIRIQAPSALGSGAGRQAFWNFD*
back to top

mRNA from alignment at L-elsbetiae_contig1154:10764..22970+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1154.1351.1 ID=mRNA_L-elsbetiae_contig1154.1351.1|Name=mRNA_L-elsbetiae_contig1154.1351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12207bp|location=Sequence derived from alignment at L-elsbetiae_contig1154:10764..22970+ (Laminarionema elsbetiae ELsaHSoW15)
CCGTCTCTTGGGGGTCTTCTCCAGAGTTCCAGAGTCAAGATCACCGATGA
GACTGGAGTCGGAATCTTTTGTTTGCAGTCGAGTTCCCAGTTTTCGCACA
ACATGAGGTTAGGGGTGAGGGTTAGTACAACTCTACCCAGCTTACTCTAC
CGGACCCAACACTCCTCCTGTACATACAGCTCACTTCCACCGGACCAGAT
GCCTATTAGTCCTCAAGTTTAAAATTCCGGCAAACATGTGCCTGCACACA
CAGATCACAGATTTTCAAACAACAAGCGGCGCGGACCTGAATTTTGAAGG
AGCGGCGAAATAGAGAGACGTCCAAATCCCGCCAGCATGTAGGTACCACT
TTACTACAGCCATATTACATACCGTAGTTCCGCCAGTTTCTGATTTCTGA
TCAATAGCTACTGATCAACGCTTTGAGCGCGCCTTGGACCGCGAAACGAT
CCCGCGCCTTCGGAGCACGAAACACGTCCCGTCCCCACAGGATGAGCAGT
GTCAAGAAGTCGTGCGACTTCTGCGTTCGCCGAAAGCGGTCTTGTGATGG
CCAAGCCCGCCGGCGTTGTAGGTGAGTTTGAAAGCTGGTGGGTCGTGAGA
GAAACAGTTTATAAAAGCGCAACAGCAGACAATCGTAGCCAACACTGATT
GCCTTACTTACCCCACAGCCAGCGACAGCTTGGCGCGACGCGCCAATAAT
GCACCTCATGGAGCAACACGATGAGCAGCTGACGCTGTATGTAGGCAGTA
CAGAACACGTGTTTCGTACAAGCAATCTGTACCAACGGGTACAAAGCTAA
TACAAAAGAAATAAGATGAAGTACCAAGCAGTCTTCTGCCCTGCAGCAGA
GAGCGGGCAGGCGGTGTCTTCCACACCTACGACAGCAGTAGAGACTACAT
GTAAACGCGGCCTCATTGCAACGGATTAAGAATTAAGTATGTACGACATA
TTCCGAATTAATCAACCGAAAACATCTGGGTGAAAGGCGAAGAGGTGCCG
ACTGACGCACCGGGCCATGAATCGTGCTTGACTTTTAGCCGAACTAAATA
GATGGCTATTAATATTTTGGGCCACGCCTGACCTTTGACGACAACAAGGG
ATTTATAGCTAATCTCAGTAGGTGATCCGGGCCGGAGGGAGGGTAGTGGG
AAAACCTTCGAGCAATGAAAAACGTGCTGCAACGGTCTATCTAGACGCCT
AGATCGACAAACAGACCTACAGCAGTAGTAGCTACATACATGGAGACATG
CCGTAAAATAATACAATAGGCCTGGGCTGCTGAGTGGTTTTAACTACATG
CATACCACACAATGAGGTCGGGATAAGACGCACATGGTTACATAGTGTGG
GTTCTGTGTGTATGCGCAACCGTGACCAACGATGAGAACCAGGAATCTTC
ACTTCGAATCGTCCCGATGTCCCGCTTTTCAAAGAACACAGGCACCTGCT
GCACCCACCTAGTACGACTTGCTGTTTGGAAAATGCGGGAGTACCACCAC
TAACTAACCTACCACCGCACCAAAACAAGCAAGGTTCACGCGGGTCTCTC
ATCGCCGCAAATGCCGCGACCCCTGTCTGACCCAAAAATTCAAATATCGA
TTTTGGGAAGAGATTTGTTACAAGGTGGCAGCGGCCCGTTGTATCTATCT
CCAGGCCGCCTGCCTTTGGAAGCAATATGCGTTTGGTTTCTTTTTGAAAA
CAACCCCCCGAGATCTCGAAAACAATAAAAAAAGAGGTCGTCACATGCTC
TCTGCGCCGCGTTTCGGGCCTATTTAATGGGGAAAAAATGAGCCAGAAAA
ACTGTCGCAGATACAGCATCTAAATCGAAAGAGCGGTCCATGAAAAAGAG
AGATAAAAACAATTAGATTCTGGTCCGAGATGAGGCTTTTTTTTCGTACG
CCATGCTCTTTAACACCACCAAGCCCGCTGTCGGTGTTGCGTGCACCCAG
CTTTTGCATCGTCACAAACCAGCCGGAGTGCCACTACCGACCTCGACGAT
CGCGGCGTTCCTACACCTCCGGGTACGACGACGACGCCGCCGCCGCCGCT
GCCCAAGCTTCCCCGCCGACGCCTTCGGGTGGCCGAAGCTTTTGGGCCAC
GGATGGGGAGACCGCTCCCGCTTCCACAACAATAGGAGATGAGACGGGAG
ATGGGCGCTACGCCCCCGCAGGTTCTGGGTCCGGCAATGAACGCATGTTG
CTTCCACTCAAGAGGTACGCAGCAAGATGAGCGATTGTGAGTCGTGTGAT
GTTGCAGGGACACACAATATACGTGCGTACGTGGGGGCCACACGTCCAGT
CCGTGCCGGTCTATTTGTCTCTTTTTTCGTGGGCAATAGTAGTTGGTGTC
AATGAAGTCAAGATATGGACACCGAATCGTGCAGCCGTCAGAGTCAAACC
CCGATCCGCCCTCCTACGAAGCTCGACCGACACATCAACTGCCGCACGAA
GAGTTCAGAACTACTGGATAGTGTAGGCAGACAGGGTAGATACGCTTGCT
TGTTGCAGATGAAAAGTGCTGAAACAATCTTGACGCGGCGCCATCTATCT
TCGCCGACGTGATGTGTTTTCTCGCGTTTCACCGTCAGGGCGTGAAATAC
TTCCGTTCCGTGTGGACCCCCTCCTTCCCCTATCGGGGCTGACATCGGTC
GGCATCGACGCTACTCTACTTTGAAAACGTTGCCACACATCTCATAATAA
GCTGCACAGATAGGCATCCAGCTCGCCGTTTATTTCGCTTTTCCTGCGTA
TGGTAGCCATCATACCTGGCGTCGCGAGCTAGGTCATATTGCGCGGGGTT
CAGGACCTCAATTCCGTGCGAGGAGGAAGATCGTACCATGTAACAGTAGT
GGCGAGGCACCCACGAGGCAGGGTAAAATACCGCTGTGTCTGAAGGTTCG
GAAGCTGCCATCCGCCCACAAGAGGCCGGGGTCTGCCTCCTCAAGCGGGC
CAGTAGCATACAGACAAAAGCAGTAATAGCTCGCTCTTTCATGAGACTCG
CCTACCATATCACGGCGCTCCGCGCTTGGTGCTCTGCGAGCCTAATCCGC
GTTTGATACTGCGTGCGTGTCCCATCCTGACTTGTAGGGATGCGAGGTCG
ACGGTGTGGCGGCGACGGCACATGCGATCGATGAGGGCACACCCACCCCC
GCTCGCAACCTGTCTTGAAAAGCGTTCGGTTGTGACCATCATGGTGCAAA
AGCAGCAGAGCAGCAGGAAGCCGCTGCATAGATAGGGTGGACGGATACCC
TTGTCGGGATTTAGCCTTCGTGGATGAAATGGTTGATACAGCAGTGAGTG
GCAGAAACACCGCAAAAGAAAGGCCCGGCTGTCGTTCAATGCAACAAGAG
GAGGGCATGTGACACAACGACAAAAATCAATTTATAGACACCCCGTCTGA
GTGAAACTCGCTTTACGCCACGCACACACACTTTGCCCGTTATGCACGTC
TCTTGGCGTGCTTAAGGAGCCGTTTCAGCGCTTCTCCAGCCACCGGCCTG
ATAGGCCTGCAGGAGAACCAGTTCTTGGCCGATTTTTTCGGGTGCTTGGG
CTTCCTATCCCTCATCAGCGAGAGGTCAGTGAAATTTCCTTCAGCGGCGT
TTTTTAAACGCTCCAAGATTTCCCCAAATCTGGAACTCTGTGGATAACAT
TCCAAAAAAATGGACACGGCCGTTTCAATTTTTTCGACCCCCAAACTAGC
TATTTCTAATTTTTTCACAAATGTCTACACACAATTGTCAGCAGTCTACA
TCTAGTCTGCGAAAACGTCGTTCCAGGGAGGTAGTTATTTGGAAGCTCCG
AATTTGAAACTTGCTCTGTCTGGGGCAAACCGCCATTTCGTGATTTTCTG
GTTCCGAAAGTTTGGAAATTTGAAAGAGAAAGCGCCGTGTTGAAAACGCC
CCTTTGATTCGGTAGGATTTTTGCAATATAGGATTTTTGCAATACTGCGG
CAGAACAAAACCCCTTGTCGTACTGGGTTTAGTGTAGGAAAAAGGTGTAG
GTAAAACGAAAAACAAAAGAGCCTACCGAGTCAAGGCCTACTTGGAGCAA
TGAGATGCTCGAGTTGGACCGTTTGGCCGCTTTTGTGTATTTTTCGGGGC
ACCTACCCCTAGCTTCGGACGTATTTATGTGGGCCCCTATTGCGAGCTTT
GTTGAATTCACAGCAGTGGCCCACATTAGTTCGACGCGCTTCTACACGGA
GACGACGAGCGTTGTTTCCAAGCACCCCCCTAGCATAAAGTTCTAGACTA
CTATATGGTAAGTTTTACCCTGCACCCACCCATGCGACAAGCTGCGAGGT
TCACAATGGTTGTGGTGGGACTTGGGGAACGTTGGGATATTAGTGTCGTG
TCACGAGGTGCTTTGGAGTTGGGAAGCTCACTGGCACTGCTTGCCGTGTC
TTCGTAGTCGACCGTAACGCGGAAATGCCGCCATCGTCGTGCTCACGGCG
CGATTTACTGCCCCCCCCTCCCGCATGCAGCACCGTCCGTGGTGCAATCG
TGGGCGTCATGCTCACCAGCGCATCGCCGCAGCACCAGCACCATCCAGGG
GCACCCTTACCGTCGCGCCCACGGCTCGGATTTGTCGGAGGAGATGATGG
TGATACCGGTGAGGGCAGCAGTGGTACAGGCGGCAGTCGTTGGAGCAACG
CTTTGGCGGCCAAGAGCGGACCGGTGGCACTGCCGCGTGACTCGCCGACG
TGCGTCCTGTGGTGTGCGATTGCGCTTGGAGCACTCGTGCGGGGTTTCCC
CCTTGATCATGTGGGTGCCGTCTACATATGTTGGCATATGCTGCTGTCGT
GAGGTTTGAAAGCCCCAGAAATTTTTAAGGGCGGCGAAGGCATCTAGTTT
GGATCCACACGATGAGGCTCGAAATGAAGCTAATTAAGACTAACTACAGA
ATGGGGTCTGGGAACTAATGTTCCGATTTCGAATTCGTGGGCTGTCGGCT
TCCAATAGCCCAAAAAAACGTCAGTATGACAGCAGATTTCGAAGAAGAGT
TTTGAGATGGCAGCACATGCCAGCAGACTGGCCGCTACCTGGTGAGCACA
GACCGGCACAGCTCTGTTTGGTTTAAGGGAGCGTTTTTCTTTGGTCTTGC
ATCACCGCCCTGCCGCTGTGCTCTCGTGAGCTCGCTCCGAGGGGGGATCT
TGTAGTATATACTGTTTTCAACTTTTCGGTTTGCTGACCTCTTTTCGTTT
CAGGTGGGGCGCTACGTTGAACTCGCGCAAGAGTCGCTGCGGACTTTTCA
CGACGGTGCTACCCTCGGCACGGCCAGGTGCGACAGACGACCGCAGCGCT
CCCCCCGTACAAGCACTTCTATGCACATAGCTGCTACTCTGCTGTATTTT
GTATTTTCTACCTCCGCCGGCATTGTTTCGTCCCCTCAAGTCGAGTTCCG
GCAGGGATTCATGCCCCTGACACTATCTTCCTCGTCGCGTGCTGACCCTT
CGGGTGCATTTTTATTTCCGTATACCTTTTTTTTAGGGATAAGGTATCCT
GTGACCACGGGAATTGACCGTATCAAGTGTTGGATTGTACGGACATAGGG
AGGTACTGGGTGGAGAGATCGGACCGGTTTTTAATGTGAAGAAACAACTG
CTGTTTGCCTTGCTCAACAAGGAGCCCCGTATATCACTTGTAGCACGGAT
GAAAATCACCGCAGGTCCTCTCAATTTCTAATCGAACCACCTCTCGACTC
ATCTCCTGCCGTCTGCACAGGGCTTATGTCGCCATGGCCATCTTGCACAA
TTTTCTTGGCGAACAGGCAAGTGCGTTGAGGCAGAGGCCACGGGTTTGCT
TCAGGCCCGTTGCCGGGTGGTCTCTACCTCGTATGTTGCCCTTTCAGGCG
GAACCCCCTCTTCGTTTTGTGGGGTTTCAAGGGCTCCGTGGGGGGTGGAC
GTGAATAGCAATAGCTCTTTCGAACACGCCCGCGGAAGAATGCTGATTGA
TGTTGGTTCCACACCCACTGTGCTCTCGCCGGGACATTGCGTGCGGAGTG
CAAGCTTTGTTACCCGCATTGGATGGCGATTGGATGTCTTACTTAGTTAC
GGGCTTTGGAGATATGTTCGGCATGTGTCAGGGGGCCCGCTTTGACCTCA
GCTCGCGGTCGGCGGGTCAGAAGGTAATGTTGTCCACCAGTATTGAACTG
CGGGTTTCAATGACGGTGAGGGGGTGGAAGCTTGGCTGCGTGCCTCGTGT
GTTGCTGCTGCTGTGTGGCCACGTACCGTCGCCTACCGGGAGATTGCCGC
AGACCACCCCAACCCCGTGCCTTGTTCTTGTTGTTTCTTCACATTAAAAA
CCGTTCCGATCTCTCCCCCTAGTACCTCACTGTGGGCGTACTACTCCCAA
CACTTGATGCGGTCAATTCCCGTGGTCACAGGCTATAACTTATACAGTAC
CTCAAAATAAGTAAACGCCCACTGGTTGATAACTACTCTCGCTCGAACCC
CAGGTAAAAAGCTACGAGTACGTCAAGGTCGCGAACAGCATCGTGCAAGT
ACTGCCGCCAGGAGAGATCCCCCTGGTGAGGATAATCATGCTCCAACTTG
TGTGTTGTCTGTCGTTCCTCTCACGAGCGCCTGTTGTAGCTGCCAGGGCC
TATGTGTGTAGCTCTCCATGAGGAGTGAGTCGTCAGTTTCTGACAGTTCC
AAAAAAAGGGCAGCAAACCCTCAGGTTTATAAATGGACGATTTTGCGTGC
TCCGGTTCAGTCTCAGGCTTTGCTTCGATCAGCATGTGTTTCGAGGGAGG
GCCGGTACCGTTCAGAGAGCGCAGCGTGCCGCCAAGTAGCGGGAGAACGG
GGGTATTTTCGATAAGCACTCGTTTGAATGGGGAGCAGTGTAGGCTTACT
GCCGCAGGGCCCCCGATTCTGAAAAAATGGCTGTGGGGGATGTTTCACTC
TATTTTCTAGATAAATATCCCCCCCCCCCCCGCTGCCCCCACAGCCTCCT
TTTTGGAGTCGGGGGCTCTGTTGCAGGAAGCCTATACACCAACTCCGCGC
ACGGACCCCCTTTACACAGACTCCAGCATTTGTACATGAACCTTTTCTGA
AAGTGGTCGCACGTGCTACATGACCCTCGATATTCTTAGATAGAGCGTGT
GGGGCGGAGGTGGGCATTTTGCGTACCGTGCTCGTTCAGCCCGATGGAGA
AAGTTAGTACAGGGCATTCAACGGGTTCTACGTGCAGCCGCCGAGTGGAC
GGCCATCGCAGCCTTGATTTGCAGACCACCTTCGCAAGAAAATTAACTTG
TATCTATCTGGGAAGTAGAGGCAGGGTTCCGTAAACCCCAAACCGTAACC
CTAACCCGAAACCCCGACACCCTTTCCCGATTCCTATGCTTTGTCCCATA
CGTTAGCTCAAGACAAACCCTGCGAAGGCTACTAATATTGTGGTGCAGCA
CAACCCGTGTAGCTACAATATATACCTACGCACCCAACCTGGGCGCCTCA
CAGCAGTGTAACGCTCAAAAACGTGTCAAGCGCCTGGGATGCTTTAGCGC
CTGGGATGCTTCAGTAACGTGCCGCGTCTGTACGGGGCAGTGTGTTGCGC
GCGCACCCATAGGCACAGCTCTTTCGCTCCTTTCGCTCGCTTACGGTGTC
TTTGCAGACAGCAGTACTGGTGTTGGGCGATTTATTCGCTCGGACGATTG
AAATGCCCAGAGTCATGCTCACCTCGTTTGGACGAAACCCCAGGGGTTCA
CGGAGCTACTGCAACTGGCTGGTTTCGCCTGGGCAATGGAGACAGACCTC
GCCTCCGCGGTAGAGACCAATGGCTACTGGAACGAGGCGCCTCTTATTTG
GGAGGTACGGTGGGGGCGGGGAGCTTTCTATCGGGAGCTTGCGCGTCTCG
CTCTAGCGACGTTGAACCGACCAGCGTCTCTGGGTTGACAGCGACTTCGG
TGCAAGCGCAAGGGGCTATTTCTGCAGCATCTGTCACCAAACAATAGTCA
CTGCTGCTATCATGGCTTCAAAACCAGCAACCACCTTCGGAAACAGACGT
GTATATCTGCCCCCAAGCCCTTCACCCTGATCCCCCCCCCCCCGCGGGCG
CTTTTCCCTTATACCGCTGCGCTATGAAGCTGGCAGATAGTGTTGTGGAA
CGAGATGTCTGCGCCTTCCTTCTTGCGGTCAACATGCGGGTCAATCAGCC
GTTTTTGGACGAGACAACCGTCGACCACTGGTTTGTCGCTAAGCAGCAGC
AGCTGTCTCAGAAAGCGCCGGTGGCCACCCTCCCACCCGTTGATAATCCG
GACCTCCTGCGTGGTGCGGAAGTGGATCGCGTCTGTCTCGGCAACGTCGA
GGCTTGCGAGGAGGTGCAGAAGAAGTCCGTGCTGCCCGAGATGCTTCGTC
TGGAGGAGGAGTTCATCGGAAAGTGAGGAAGACGCACACGCTTCGGGCCA
CCCTTGTTGCACGGCTTCCCTCGGTCCAAGCCGTGGGGCTGTGTAGCCGA
TGCCAGCCAAAGACGCCGTGTACGTAACGTACGCGCGGGAAAACGTTTTT
CGGTCTCGTGTAGGACACAGCCACTCGTATCTCCGGTGGGTGGGCCCAGG
GATGACGTGATAGGTTGAATACGAATTTCCTCACCTTCACTCCCCCCCCC
CCCCCCCCCCCCCGCGCCCCCGCAATTTTCCCCCTGAATCACCACTGACC
ACTTCGGAAACCCCCGCACAGCAGTTNNNNNNNNNNGACACAAGCCCTCG
TATCTCCGGGGGGGGGGCCCAGGGGAGCCGGGATAGGTTGAAAAACAATT
TCCCCCCCTTCCCCCCCCCCCCCCCCCCCCTCCGCGCGCGCGCCTGCAAT
TTTCCTCCTGACTACGACATGACAACTTGGGAAACCCGCGCACAGCAGTT
CCGCGATGCGCCTCGGACTAGGCGGGCTGCTCTACTATGGGTGAGCTCGA
GTTCAAGGCTTGGAGGCGTTGTGATCCAGTACAACTCGTGGTTAATGCAG
GATATGCGTCTGGGAACAGGGCTTGTGTCTGGGGCGGGGGGGGGGGGGGG
GGGGGGTCGGGGGGGGGGGGGCGGAGAAAAAACCGGGTCCGGGGGGGGGG
GGTTTTTAAAAAAATTAAACGGCGTGGGGGGGGGCCCCGGAGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGCGATCCGTTGGGGGATGGCATCGAACAAACCGGTTCCA
TGTGTGGCGACTTGTTTAGAAAACTCAACGGCTTGAAGGGGAGCTCAGAA
GCAAACGGGTGTGCCAGGGGGTTGTCAAGAAACCTTTGAGAATTAGCCCT
TTTAGTCGAAACCTGTTGCGCCGTTCTGAAAGGATTGCAAGAGGCTCCTC
TCCCTAGTGATCGACCACCCTCTCCGCCAGTTTACGCGCTCGAGGTATGC
GTGCGTGAACAGCTCGTGCGTGGCTGCATCGCCGAAAAAGTCGGCGACAC
GCTGATATCGTGCTGTCCCTGGACTGCTTCCTCAAACGCGAGTATTGTAC
GGCTGCGATCGTGGCTGTTTACCTTTGCGCCTGCAGGGAGCTTGGGTACC
TGCAGCTTCTGAACAAAGAGGCATCAGCACAGGCATCCCTCCGGCGGTGC
GCTGAAGTGCTCATACGCTACCCGGGGCTGTGCCGCTACAACATTTGGTG
GGTTAAATTCTTTTTCTGTTCAAAACGCTTATTCACCTTCTGTGAGAGCT
GTATTGTTTGTCTATTTAAGAGAGTCATCATGTGCTGCCGAGTTGAAACG
TGTTGCGGTACCGTCAGTTTCAGAGAATTATAATTTCGAAACAGCTGAAG
CCTTCCGGGTACGCCCCACCTTTGATGCACAGTTGGTAGCACGTTGGCAT
GCAGCCAAGAACAACGCGAATATCCCTGGTTGTTGGGTATCCTGTGATGT
GCCCGCAGTCCGCCGCCAACTCTTGTCCTCCTGTGCGCCATTTCGACGCA
ATGCAGGTTCCACTACGCTCACTGCCTGCTCCACTCGTGCGTAATGTTCG
GGGATCGGCGCGGTTATGAGGCTTTGAAAGTTTCGTACAACTCGGTGCGC
CCGGTTGCGTCCCCGCCTGCCCCGCCGTACGACGAGTGGCGCGGAATGTC
CGACGTCTGCGACCGCCCGTATTGCAGGTGCTTACACGCTTCCTCTTCAG
TGTGCTCGTTGCGGGTGTGATACGTAGATGCCTTTTTTCGCGGTGTGCTG
ACTTACGGCATGAACCGCCTATGTGGCTGTCTGGCTAGAAGAGACATGCT
GTGCGTGCCGGCATTCTCACAAACGACCCTCAGCTTGCAGAAAATACCCG
TAGTCACAAAGGATTATCAGTACGCGTGTGGGTTATACATACCGAAGCGC
TCGTTATGCGATACATATGTCTGGAATGTGGAGAACGTGAAATTGGCTTT
TGACCTTTTTCCTGCAAGAGGGGGAACGTGGTGCCTAGGGCAGAGCACCG
ACCGCACCGGGGACTAAACGTTCGTTTGGCGCCGGGATGTGGCGTACACC
GACACAAGTGCTTGCTGCTGTCTGCGCGCCTCTACGAAAGTGCAAGAGTT
GTCTCAAAACGCACAATTATCTTTCATTGCAGTGCGCTGCTCCCTTGGAG
AAATGCCGCCATCACGACTCATTCGAAATAAGTGAAAATCATACATACCG
CGTTCGTTCGCAGTCGTCACTGACTACTGCGTGGTACCTCTTTGGCAAAT
CTCTCCCTTCCCCGGCCGAACGCAGGAGAGTAGCCATGCGTTCGAAGTCC
GTCCATAGAGATATCAGGATCCAGGCGCCCAGCGCGTTGGGTTCTGGAGC
TGGACGGCAAGCTTTCTGGAATTTCGATTAAACGCCGGGCCTGAAAACAG
TATCTAAGTGCTCTAGCATGATCGGGGTGTGTGTAGTAGAGTAGGTAGGG
TCTGTTAGCGCCAAGAGTACGCGTGTTCATTAAGGGCGGGGGGTGGGGGG
GTTCGGATCGAGGGAGGCTTGTACCCGTCTGCGCTGCGTCGTTCTGTATT
TTTTTGCCCCTGTTCAGCCTCGAGCGTAAGTGAAGCAAAGCAAAGCTGCA
CGCAGAGAGTGCATATCGAGTTCAGCCGTCGACCAAGTAGGGTAAATCAG
CCGCCGCCTGATTAAATATCCCGCATGTAGCTCAACAGACACGGATACAA
CAGCCCTGTAATTTAGCGAGTATATATACATACGAAAGTATATATTAAAA
AATGGTACAGTAGAAGTAGCAAGATCACGACGTGATCACCTTGTCCCGTC
TGTAGTCTGATGAGCAAGCTCACATTTAAGTACAAGTCTCGGAAGCGGCT
CGACAAACACGGGTGTGACCACCGGTCGCTCGTCCTGTGTTGGTTGGCTT
TGCTGTCCGTGGGTTTTTTCGTGGGGATTCGCCGCTTTCCGGTGTTGTTT
CCCCTCTATTCTGTGTGTTTTCTCCTGGTTGTTGTCCGTAGCTGCCGGCT
GCTTTCCGTTGTTTCCCGTCGTTGTTTCCTGCGTTGGTTGGTGTTATTGT
CCGTGCGGTTTTCCGTGGGGGTTCGTGGCTTTTCCCGCTGTTTCCTGCCG
CTGTTCTCCGTTGGTTAAGCGTGGCAGTCAGTTGGTGTCCCTGAAGGTCT
TCCTGCCGCTGTTCTCCGTTGGTTAAGCGTGGCACAGGAGGGGGGAAAAT
GCATGAGGGTGGCTGCCACCACCCCGCGATATCCCCTGTAAACGCCGGGC
GAAAAAGAAAGGGCGAAAATAAGTTTTACTTGTGATAGACCACCTCGGGA
CGTTCTCAACGGTAGAGAGGCGGTCTGTGAAGGATACGAAACACCCCGGG
GTGACTTGTCGGGGCGTGGTCTACTTTTCGTTTGTCGATGTTGAACGATG
CTTGTATTTTAAATTACGTCTGCCGTTTCTTCGGTTTTGGTCGTCGTCGT
GCGTAATGTTGGCGTTTTGCGATACTTCCTGTGTAACTCAGGCTTCTCGC
AAGTAATGTGCTAGAGCACGACGGGCGTGGGAGGTGCTATGTGGGCCTTG
TATCATAAGCGTTGTTTTGGGCGTTGCGAAACGTCTGCCGGCAGCAGTAC
AGATATGTATGGGTATGATGGATGATATTAAATTGATGAGATACCAACCG
CAACAACAAGGGCAACAACAACAACGATGACAGCAGCACGAGCAGCAGCA
ACGGCGATGTTGCCGGAGCCGATGACCGGATAATGCCGTGGATGCACATA
AACACCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1154:10764..22970+

>mRNA_L-elsbetiae_contig1154.1351.1 ID=mRNA_L-elsbetiae_contig1154.1351.1|Name=mRNA_L-elsbetiae_contig1154.1351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3516bp|location=Sequence derived from alignment at L-elsbetiae_contig1154:10764..22970+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGCAGTGTCAAGAAGTCGTGCGACTTCTGCGTTCGCCGAAAGCGGTC
TTGTGATGGCCAAGCCCGCCGGCGTTGTAGATGAGCAGTGTCAAGAAGTC
GTGCGACTTCTGCGTTCGCCGAAAGCGGTCTTGTGATGGCCAAGCCCGCC
GGCGTTGTAGCTTTTGCATCGTCACAAACCAGCCGGAGTGCCACTACCGA
CCTCGACGATCGCGGCGTTCCTACACCTCCGGGTACGACGACGACGCCGC
CGCCGCCGCTGCCCAAGCTTCCCCGCCGACGCCTTCGGGTGGCCGAAGCT
TTTGGGCCACGGATGGGGAGACCGCTCCCGCTTCCACAACAATAGGAGAT
GAGACGGGAGATGGGCGCTACGCCCCCGCAGGTTCTGGGTCCGGCAATGA
ACGCATGTTGCTTCCACTCAAGAGCTTTTGCATCGTCACAAACCAGCCGG
AGTGCCACTACCGACCTCGACGATCGCGGCGTTCCTACACCTCCGGGTAC
GACGACGACGCCGCCGCCGCCGCTGCCCAAGCTTCCCCGCCGACGCCTTC
GGGTGGCCGAAGCTTTTGGGCCACGGATGGGGAGACCGCTCCCGCTTCCA
CAACAATAGGAGATGAGACGGGAGATGGGCGCTACGCCCCCGCAGGTTCT
GGGTCCGGCAATGAACGCATGTTGCTTCCACTCAAGAGGAGCCGTTTCAG
CGCTTCTCCAGCCACCGGCCTGATAGGCCTGCAGGAGAACCAGTTCTTGG
CCGATTTTTTCGGGTGCTTGGGCTTCCTATCCCTCATCAGCGAGAGGAGC
CGTTTCAGCGCTTCTCCAGCCACCGGCCTGATAGGCCTGCAGGAGAACCA
GTTCTTGGCCGATTTTTTCGGGTGCTTGGGCTTCCTATCCCTCATCAGCG
AGAGCACCGTCCGTGGTGCAATCGTGGGCGTCATGCTCACCAGCGCATCG
CCGCAGCACCAGCACCATCCAGGGGCACCCTTACCGTCGCGCCCACGGCT
CGGATTTGTCGGAGGAGATGATGGTGATACCGGTGAGGGCAGCAGTGGTA
CAGGCGGCAGTCGTTGGAGCAACGCTTTGGCGGCCAAGAGCGGACCGGTG
GCACTGCCGCGTGACTCGCCGACGTGCGTCCTGTGGTGTGCGATTGCGCT
TGGAGCACTCGTGCGGGGTTTCCCCCTTGATCATCACCGTCCGTGGTGCA
ATCGTGGGCGTCATGCTCACCAGCGCATCGCCGCAGCACCAGCACCATCC
AGGGGCACCCTTACCGTCGCGCCCACGGCTCGGATTTGTCGGAGGAGATG
ATGGTGATACCGGTGAGGGCAGCAGTGGTACAGGCGGCAGTCGTTGGAGC
AACGCTTTGGCGGCCAAGAGCGGACCGGTGGCACTGCCGCGTGACTCGCC
GACGTGCGTCCTGTGGTGTGCGATTGCGCTTGGAGCACTCGTGCGGGGTT
TCCCCCTTGATCATGTGGGGCGCTACGTTGAACTCGCGCAAGAGTCGCTG
CGGACTTTTCACGACGGTGCTACCCTCGGCACGGCCAGGTGGGGCGCTAC
GTTGAACTCGCGCAAGAGTCGCTGCGGACTTTTCACGACGGTGCTACCCT
CGGCACGGCCAGGGCTTATGTCGCCATGGCCATCTTGCACAATTTTCTTG
GCGAACAGGGCTTATGTCGCCATGGCCATCTTGCACAATTTTCTTGGCGA
ACAGGTAAAAAGCTACGAGTACGTCAAGGTCGCGAACAGCATCGTGCAAG
TACTGCCGCCAGGAGAGATCCCCCTGGTAAAAAGCTACGAGTACGTCAAG
GTCGCGAACAGCATCGTGCAAGTACTGCCGCCAGGAGAGATCCCCCTGGG
GTTCACGGAGCTACTGCAACTGGCTGGTTTCGCCTGGGCAATGGAGACAG
ACCTCGCCTCCGCGGTAGAGACCAATGGCTACTGGAACGAGGCGCCTCTT
ATTTGGGAGGGGTTCACGGAGCTACTGCAACTGGCTGGTTTCGCCTGGGC
AATGGAGACAGACCTCGCCTCCGCGGTAGAGACCAATGGCTACTGGAACG
AGGCGCCTCTTATTTGGGAGCTGGCAGATAGTGTTGTGGAACGAGATGTC
TGCGCCTTCCTTCTTGCGGTCAACATGCGGGTCAATCAGCCGTTTTTGGA
CGAGACAACCGTCGACCACTGGTTTGTCGCTAAGCAGCAGCAGCTGTCTC
AGAAAGCGCCGGTGGCCACCCTCCCACCCGTTGATAATCCGGACCTCCTG
CGTGGTGCGGAAGTGGATCGCGTCTGTCTCGGCAACGTCGAGGCTTGCGA
GGAGGTGCAGAAGAAGTCCGTGCTGCCCGAGATGCTTCGTCTGGAGGAGG
AGTTCATCGGAAACTGGCAGATAGTGTTGTGGAACGAGATGTCTGCGCCT
TCCTTCTTGCGGTCAACATGCGGGTCAATCAGCCGTTTTTGGACGAGACA
ACCGTCGACCACTGGTTTGTCGCTAAGCAGCAGCAGCTGTCTCAGAAAGC
GCCGGTGGCCACCCTCCCACCCGTTGATAATCCGGACCTCCTGCGTGGTG
CGGAAGTGGATCGCGTCTGTCTCGGCAACGTCGAGGCTTGCGAGGAGGTG
CAGAAGAAGTCCGTGCTGCCCGAGATGCTTCGTCTGGAGGAGGAGTTCAT
CGGAAATTCCGCGATGCGCCTCGGACTAGGCGGGCTGCTCTACTATGGTT
CCGCGATGCGCCTCGGACTAGGCGGGCTGCTCTACTATGGGGAGCTTGGG
TACCTGCAGCTTCTGAACAAAGAGGCATCAGCACAGGCATCCCTCCGGCG
GTGCGCTGAAGTGCTCATACGCTACCCGGGGCTGTGCCGCTACAACATTT
GGGAGCTTGGGTACCTGCAGCTTCTGAACAAAGAGGCATCAGCACAGGCA
TCCCTCCGGCGGTGCGCTGAAGTGCTCATACGCTACCCGGGGCTGTGCCG
CTACAACATTTGGTTCCACTACGCTCACTGCCTGCTCCACTCGTGCGTAA
TGTTCGGGGATCGGCGCGGTTATGAGGCTTTGAAAGTTTCGTACAACTCG
GTGCGCCCGGTTGCGTCCCCGCCTGCCCCGCCGTACGACGAGTGGCGCGG
AATGTCCGACGTCTGCGACCGCCCGTATTGCAGGTTCCACTACGCTCACT
GCCTGCTCCACTCGTGCGTAATGTTCGGGGATCGGCGCGGTTATGAGGCT
TTGAAAGTTTCGTACAACTCGGTGCGCCCGGTTGCGTCCCCGCCTGCCCC
GCCGTACGACGAGTGGCGCGGAATGTCCGACGTCTGCGACCGCCCGTATT
GCAGGAGAGTAGCCATGCGTTCGAAGTCCGTCCATAGAGATATCAGGATC
CAGGCGCCCAGCGCGTTGGGTTCTGGAGCTGGACGGCAAGCTTTCTGGAA
TTTCGATTAAGAGAGTAGCCATGCGTTCGAAGTCCGTCCATAGAGATATC
AGGATCCAGGCGCCCAGCGCGTTGGGTTCTGGAGCTGGACGGCAAGCTTT
CTGGAATTTCGATTAA
back to top