mRNA_L-elsbetiae_contig11537.1348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.160e-33 Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 NQAVTGARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHT 240 NQAV GARLMKINAWEPALEKEIRR VRAEE+RVLLKATLLRA+NEAMFFVQPAV+SCLVF TYHLLGNVL P+QV T Sbjct: 222 NQAVAGARLMKINAWEPALEKEIRR---VRAEEIRVLLKATLLRAINEAMFFVQPAVISCLVFATYHLLGNVLAPRQVFT 298
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI) HSP 1 Score: 129 bits (324), Expect = 5.460e-33 Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 NQAVTGARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHT 240 NQAVTGARLMKINAWEPALEKEIRR VRAEE+RVLLKATLLRA+NEAMFFVQPAV+SCLVF TYHLLGNVL +QV T Sbjct: 275 NQAVTGARLMKINAWEPALEKEIRR---VRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFT 351
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 129 bits (323), Expect = 7.450e-33 Identity = 68/80 (85.00%), Postives = 72/80 (90.00%), Query Frame = 1 Query: 1 NQAVTGARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHT 240 NQAV GARLMKINAWEPALEKEIRR VRAEE+RVLL ATLLRAVNEAMFF+QPAV+SCLVF TYHLLGNVL P+QV T Sbjct: 175 NQAVAGARLMKINAWEPALEKEIRR---VRAEEIRVLLTATLLRAVNEAMFFIQPAVISCLVFATYHLLGNVLAPRQVFT 251
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.770e-19 Identity = 45/52 (86.54%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 85 VRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHT 240 VRAEE+RVLLKATLLRA+NEAMFFVQPAV+SCLVF TYHLLGNVL P+QV T Sbjct: 113 VRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTPRQVFT 164
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.140e-18 Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 91 AEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHT 240 AEE+RVLLKATLLRA+NEAMFFVQPAV+SCLVF TYHLLGNVL P+QV T Sbjct: 112 AEEIRVLLKATLLRAINEAMFFVQPAVISCLVFATYHLLGNVLAPRQVFT 161
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.930e-12 Identity = 42/78 (53.85%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 4 QAVTGARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHL-LGNVLKPQQV 234 QAVTGA L+K++AWEPAL +EI + R+ EV+VL A LRA NE++FFVQP V++ LVF + LGN L P V Sbjct: 338 QAVTGAHLVKMSAWEPALLREIGK---ARSAEVKVLRSAAELRAANESLFFVQPTVLALLVFGVHSAALGNELTPSNV 412
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A0L0F1U5_9EUKA (ABC transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0F1U5_9EUKA) HSP 1 Score: 64.7 bits (156), Expect = 9.360e-12 Identity = 31/83 (37.35%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 1 NQAVTGARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHTCWS 249 ++ + G R+MK+ AWE + + + + +R++E+ + KA ++R N AMFF P++++C +FVTYHL GN L ++V T S Sbjct: 2 SEVLMGVRVMKMYAWEESFARVV---QSLRSQEMIHVRKAAVMRGFNYAMFFASPSIITCAIFVTYHLTGNQLTSKKVFTVLS 81
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A433D3T0_9FUNG (ABC transmembrane type-1 domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D3T0_9FUNG) HSP 1 Score: 65.5 bits (158), Expect = 4.020e-11 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 16 GARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHTCWS 249 G L+K++AWE +++ I +R EE+ + +A LRA+NEA+FF PAVVS + F+T+ LGN L+P V C + Sbjct: 2 GINLVKLSAWEEPMQRRINE---LRDEEIACIRRANALRAMNEALFFFFPAVVSAVAFITFWALGNQLRPDNVFPCMA 76
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A433QHE7_9FUNG (ABC transporter transmembrane region-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QHE7_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 9.560e-11 Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 1 NQAVTGARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHTCWS 249 + + G L+K++AWE +++ I +R EE+ + +A LRA+NEA+FF PAVVS + F+T+ LGN L+P V C + Sbjct: 154 SDVLMGINLVKLSAWEEPMQRRINE---LRDEEIACIRRANALRAMNEALFFFFPAVVSAVAFITFWALGNQLRPDNVFPCMA 233
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Match: A0A433P5I4_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433P5I4_9FUNG) HSP 1 Score: 63.5 bits (153), Expect = 6.850e-10 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 16 GARLMKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSCLVFVTYHLLGNVLKPQQVHT 240 G L+K++AWE +++ I +RA E+ + +A LRAVNEA+FF PAVVS F+T+ LGN L P V T Sbjct: 2 GINLVKLSAWEEPMQRRI---NDIRANEIAYVRRANALRAVNEALFFFFPAVVSTTTFITFWALGNQLSPDNVFT 73 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11537.1348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11537.1348.1 >prot_L-elsbetiae_contig11537.1348.1 ID=prot_L-elsbetiae_contig11537.1348.1|Name=mRNA_L-elsbetiae_contig11537.1348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=74bp MKINAWEPALEKEIRRQEVVRAEEVRVLLKATLLRAVNEAMFFVQPAVVSback to top mRNA from alignment at L-elsbetiae_contig11537:2964..3890- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11537.1348.1 ID=mRNA_L-elsbetiae_contig11537.1348.1|Name=mRNA_L-elsbetiae_contig11537.1348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=927bp|location=Sequence derived from alignment at L-elsbetiae_contig11537:2964..3890- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11537:2964..3890- >mRNA_L-elsbetiae_contig11537.1348.1 ID=mRNA_L-elsbetiae_contig11537.1348.1|Name=mRNA_L-elsbetiae_contig11537.1348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=444bp|location=Sequence derived from alignment at L-elsbetiae_contig11537:2964..3890- (Laminarionema elsbetiae ELsaHSoW15)back to top |