mRNA_L-elsbetiae_contig11527.1338.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: D7G8X0_ECTSI (Mitochondrial carrier protein-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X0_ECTSI) HSP 1 Score: 308 bits (788), Expect = 1.890e-102 Identity = 160/190 (84.21%), Postives = 167/190 (87.89%), Query Frame = 1 Query: 1 AALFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 AALFPIDTAKTLRQANPKAFKGTRDAL HICRTRGPWAIY GIPTAV+GAMPSSALYFGTYEAVKTRLMR AA FP GP GG VHPAARA AHAVAAACGNAASSL+FVPKEYVKQTLQASGMGAAGGARETAK IV+RT++E+GV+GLYRGYWATLSRNVPSAIIRFSLYEEIKL Sbjct: 40 AALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGP----GGPREGEGXXXXXVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAAGGARETAKEIVRRTVKEKGVKGLYRGYWATLSRNVPSAIIRFSLYEEIKL 225
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A6H5JI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI22_9PHAE) HSP 1 Score: 306 bits (785), Expect = 2.750e-100 Identity = 159/190 (83.68%), Postives = 166/190 (87.37%), Query Frame = 1 Query: 1 AALFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 AALFPIDTAKTLRQANPKAFKG+RDAL HICRTRGPWAIY GIPTAV+GAMPSSALYFGTYEAVKTRLMR AA FP GP GG VHPAARA AHAVAAACGNAASSL+FVPKEYVKQTLQASGMGA GGARETAK I++RT+RE+GVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL Sbjct: 168 AALFPIDTAKTLRQANPKAFKGSRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGP----GGPREGEGXXXXXVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAVGGARETAKEIIRRTVREKGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 353
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A836CFD2_9STRA (Mitochondrial carrier protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD2_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.840e-67 Identity = 117/189 (61.90%), Postives = 137/189 (72.49%), Query Frame = 1 Query: 7 LFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQAS-GMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 L PIDTAKTLRQ+NP+AFKGT AL H+ +T GP +IY G+ AV+G+MPSSALYFG YE+VK RL RAA R+ GG + P RAG H ++AACGNAASSLVFVPKEYVKQ+LQA G G A A +V+ TLR+QG+RGLYRGYWATLSRNVPSAI+RF+LYEEIKL Sbjct: 16 LHPIDTAKTLRQSNPQAFKGTIQALSHMLKTHGPGSIYAGVGAAVVGSMPSSALYFGAYESVKARLTRAAGRRWGGGSAQLV-------------LPPGVRAGVHVISAACGNAASSLVFVPKEYVKQSLQAQKGAAMRGQATLNAVALVKATLRQQGIRGLYRGYWATLSRNVPSAILRFTLYEEIKL 191
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A7S2DQE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQE7_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.070e-40 Identity = 90/188 (47.87%), Postives = 111/188 (59.04%), Query Frame = 1 Query: 7 LFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 L P+DTAK LRQ NP + GT AL R RG +Y+G+ + LG++PSSALYFGTYE VK RL A GC R V R H V+AA GNA SSL+FVPKE+VKQ LQ + GG T +++ TL+ +G+ GLY GY ATL RN+PSA IRF LYEE+K+ Sbjct: 41 LHPLDTAKVLRQKNPTQYAGTLQALVVTARERGIRPLYSGLWASALGSLPSSALYFGTYECVKRRLYALAR---------GCQDAQDEGVAR---VSARVRPAIHLVSAASGNAVSSLLFVPKEFVKQQLQTASALTNGGKASTLG-VIRTTLKTRGIGGLYAGYGATLLRNIPSAGIRFILYEELKV 215
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A7S2STS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS4_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.060e-39 Identity = 97/192 (50.52%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 7 LFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQAS----GMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 L P+DT KTLRQ +P+ +K T AL RTRG A+Y G+ A +GAMPSSALYFG Y+ VK RL R A R + GGXXXXXX + R H AA CGNAASSLVFVPKE+VKQ LQ + G+G A ++V T++ +GV +Y GY ATL RN+PSA IRF +YEE K+ Sbjct: 47 LHPLDTCKTLRQRHPQQYKSTLAALSSTLRTRGIGALYRGVIPAAIGAMPSSALYFGFYDIVKRRLTRFVANRDQ--QVNSRGGXXXXXXQGGSPLESGIRPVVHMTAAVCGNAASSLVFVPKEFVKQQLQTNTKYRGLGGAF-------QVVAHTVKTKGVGAVYAGYTATLLRNIPSAAIRFVIYEEAKI 229
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A7R9WVA4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVA4_9STRA) HSP 1 Score: 145 bits (365), Expect = 7.600e-38 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 1 AALFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAI---YNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIK 567 +AL+PID+AKTLRQ+NP + R A + ++ W I Y GI A +GA+PSSALYFG YE+VKT L RA + + P R G H AAACGN SS VFVPKE++KQ LQA+ A + + ++E+G+RGLY GY ATL RN+PSA++RF LYEE+K Sbjct: 174 SALYPIDSAKTLRQSNPSMYSSVRHAFLSLIKSGNRWHISKAYKGIIPAAVGAIPSSALYFGAYESVKTALQRAVPD-YDNAPI-------------------VQRLGIHGTAAACGNMISSAVFVPKEFIKQQLQAN-------AEKNMMATITSVVQEKGIRGLYSGYKATLLRNIPSAMLRFVLYEELK 338
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A7R9UPS8_DIALT (Hypothetical protein (Fragment) n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UPS8_DIALT) HSP 1 Score: 140 bits (353), Expect = 2.150e-37 Identity = 82/189 (43.39%), Postives = 110/189 (58.20%), Query Frame = 1 Query: 7 LFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGM-GAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 L P+DT KT+RQAN F GT + I + GP +Y G+ TA++GAMPSS ++FGTYE +K RL + RA H V+AACGNAASSL+FVPKE VKQ LQA+ + G + G R+ IV+ E GVRGLY Y AT+ RN+P+ +++F +YEE++L Sbjct: 38 LHPLDTVKTVRQANRAQFPGTFRTIRRIWQQNGPRGLYGGLGTAMVGAMPSSFVFFGTYEFMKARLQALKPD-----------------------CSLDERARIHVVSAACGNAASSLIFVPKEMVKQRLQAARVAGVSTGVRQVVSTIVK----EHGVRGLYAAYSATIMRNIPTTVLKFLIYEELRL 199
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A4D9D8F7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F7_9STRA) HSP 1 Score: 140 bits (352), Expect = 3.630e-37 Identity = 93/188 (49.47%), Postives = 111/188 (59.04%), Query Frame = 1 Query: 7 LFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 L+PID AKTLRQA P A +G +L R G +++ G+ AVLG+MPSSALYFG YE VK RL+ R G R R AHA+AAA GN ASSL+FVPKE +KQ LQ A GGA + LRE+GVRGLY GY ATL RN+PSA++RF+LYEE KL Sbjct: 22 LYPIDVAKTLRQAGP-ASRGA--SLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSVSSDGSKELYQRR---AQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMY-RNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKL 202
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: W7TPC7_9STRA (S-adenosylmethionine carrier 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC7_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.660e-37 Identity = 94/188 (50.00%), Postives = 112/188 (59.57%), Query Frame = 1 Query: 7 LFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKL 570 L+PID AKTLRQA P A +G +L R G +++ G+ AVLG+MPSSALYFG YE VK RL+ R G R V R AHA+AAA GN ASSL+FVPKE +KQ LQ A GGA + LRE+GVRGLY GY ATL RN+PSA++RF+LYEE KL Sbjct: 129 LYPIDVAKTLRQAGP-ASRGA--SLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRR---VQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMY-RNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKL 309
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Match: A0A7S3LFM8_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFM8_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.090e-36 Identity = 86/191 (45.03%), Postives = 113/191 (59.16%), Query Frame = 1 Query: 4 ALFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAI---YNGIPTAVLGAMPSSALYFGTYEAVKTRLMRAAAERFPGGPEDGCGGXXXXXXGRTGGVHPAARAGAHAVAAACGNAASSLVFVPKEYVKQTLQASGMGAAGGARETAKRIVQRTLREQGVRGLYRGYWATLSRNVPSAIIRFSLYEEIK 567 ALFP+D+AKTLRQ++P +K R ALG + G W I Y G+ A LGA+PSSALYFG YE VK + ++ G P+ G R H+++A GN SS +FVPKE +KQ +Q GG RE R++Q L++QGVRGLY GY ATL RN+PSA++RF +YEE+K Sbjct: 170 ALFPVDSAKTLRQSSPSLYKNVRQALGKLVVEDGKWHIGRAYCGVIPATLGAIPSSALYFGAYECVKPWVRQSRL----GDPQKASG-----------------RFLIHSISAIAGNVLSSALFVPKEVIKQQMQ------YGGGREVG-RVIQDVLQKQGVRGLYSGYSATLLRNIPSAVLRFCVYEELK 332 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11527.1338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11527.1338.1 >prot_L-elsbetiae_contig11527.1338.1 ID=prot_L-elsbetiae_contig11527.1338.1|Name=mRNA_L-elsbetiae_contig11527.1338.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp AALFPIDTAKTLRQANPKAFKGTRDALGHICRTRGPWAIYNGIPTAVLGAback to top mRNA from alignment at L-elsbetiae_contig11527:3672..5812+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11527.1338.1 ID=mRNA_L-elsbetiae_contig11527.1338.1|Name=mRNA_L-elsbetiae_contig11527.1338.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2141bp|location=Sequence derived from alignment at L-elsbetiae_contig11527:3672..5812+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11527:3672..5812+ >mRNA_L-elsbetiae_contig11527.1338.1 ID=mRNA_L-elsbetiae_contig11527.1338.1|Name=mRNA_L-elsbetiae_contig11527.1338.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig11527:3672..5812+ (Laminarionema elsbetiae ELsaHSoW15)back to top |