mRNA_L-elsbetiae_contig115.1316.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig115.1316.1
Unique NamemRNA_L-elsbetiae_contig115.1316.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig115.1316.1 vs. uniprot
Match: A0A6H5L1V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V8_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 1.780e-65
Identity = 140/262 (53.44%), Postives = 170/262 (64.89%), Query Frame = 2 
Query:  755 ALDAATGTFKWEQPIVRGFADT-GKGAGIALNGAG-VVFVGGGFDAGVESTRSDLLIAALEVETGKVIWEWHHGTIHADGLNAIAYDDGSGILYACGYTAGDFSEPLD----PVSKPEDAVVLALDTSTQELLWLKSFSSGPDVDRIDAALAITFDRNGVLHVSGRTTGKGFSTDGREGVDDPSIKTRHTVAVHFVMSLNAADGEALVGFQSVEPVVSSLDASVMAPDTAEGDLYLSGRIGTKQDAAGIMYVRTRPTLPPTP 1522
            AL+AATG   W Q +    +DT G+  G+AL+ AG +VF+ G      E    DL IAA E+ TG+V+W W HGTI++D L  IA+D+ +G+LYACGYT GDFS  LD    P  K +D VVLA D STQE +WLK+++SGP VDR D A  ITFDRNGVLHV G T G GF TDG  G DDP  K R    V   MSL+A+DGE LV +QS+    S L +SVM PDT EGDLY+ G  G      G++Y R RPTLPPTP
Sbjct:    4 ALNAATGELVWSQSV----SDTKGEALGVALDPAGGMVFMAGSMSEPDE--EPDLYIAAFEIATGQVVWTWTHGTIYSDVLTDIAFDEENGVLYACGYTRGDFSYALDADPAPEVKLQDMVVLAFDPSTQETIWLKTYTSGPLVDREDFAFTITFDRNGVLHVGGATRGTGFDTDGSAGEDDPDTKPRLLRFVFVSMSLDASDGETLVSYQSLNYRTSRLLSSVMVPDTTEGDLYMGGHDG--DTFFGMVYRRERPTLPPTP 257
[Close]
BLAST of mRNA_L-elsbetiae_contig115.1316.1 vs. uniprot
Match: D7FTT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT8_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.680e-40
Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 2 
Query:  821 GKGAGIALNGAG-VVFVGGGFDAGVESTRSDLLIAALEVETGKVIWEWHHGTIHADGLNAIAYDDGSGILYACGYTAGDFSEPLD----PVSKPEDAVVLALDTSTQELLWLKSFSSGPDVDRIDAALAITFDRNGVLHVSGRTTGKGFSTDGREGVDDPSIKTR 1300
            G+  G+AL+ AG +VF+ G      E    DL +AA E+ TG+V+W W HGTI++D L  + +D+ +G++YACGYT GDFS  LD    P  K +D VVLALD STQE +WLK+++SGP VDR D A  ITFDRNGVLHV G T G GF TDG  G DDP  + R
Sbjct:   15 GQALGVALDVAGGMVFMAGSMSEPDEDP--DLYMAAFEIATGQVLWTWTHGTIYSDILTDLVFDEENGVIYACGYTRGDFSYALDADPAPEVKLQDMVVLALDPSTQETIWLKTYTSGPLVDRADFAFTITFDRNGVLHVGGTTRGTGFDTDGSAGEDDPDTRPR 177
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig115.1316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1V8_9PHAE1.780e-6553.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT8_ECTSI1.680e-4053.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig115contigL-elsbetiae_contig115:3930..13408 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionQuinonprotein alcohol dehydrogenase-like domain
Ec32 orthologEc-25_001500.1
Exons10
Model size2791
Cds size2493
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig115.1316.1prot_L-elsbetiae_contig115.1316.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig115 4000..13180 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815355.806312-UTR-L-elsbetiae_contig115:3929..39991622815355.806312-UTR-L-elsbetiae_contig115:3929..3999Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig115 3930..3999 +
1691682857.7180882-UTR-L-elsbetiae_contig115:3929..39991691682857.7180882-UTR-L-elsbetiae_contig115:3929..3999Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig115 3930..3999 +
1622815355.9707556-UTR-L-elsbetiae_contig115:13180..134081622815355.9707556-UTR-L-elsbetiae_contig115:13180..13408Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig115 13181..13408 +
1691682857.867897-UTR-L-elsbetiae_contig115:13180..134081691682857.867897-UTR-L-elsbetiae_contig115:13180..13408Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig115 13181..13408 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815355.8186238-CDS-L-elsbetiae_contig115:3999..42621622815355.8186238-CDS-L-elsbetiae_contig115:3999..4262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 4000..4262 +
1691682857.7307453-CDS-L-elsbetiae_contig115:3999..42621691682857.7307453-CDS-L-elsbetiae_contig115:3999..4262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 4000..4262 +
1622815355.8314369-CDS-L-elsbetiae_contig115:5681..58121622815355.8314369-CDS-L-elsbetiae_contig115:5681..5812Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 5682..5812 +
1691682857.7414987-CDS-L-elsbetiae_contig115:5681..58121691682857.7414987-CDS-L-elsbetiae_contig115:5681..5812Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 5682..5812 +
1622815355.8492115-CDS-L-elsbetiae_contig115:6233..63761622815355.8492115-CDS-L-elsbetiae_contig115:6233..6376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 6234..6376 +
1691682857.7517745-CDS-L-elsbetiae_contig115:6233..63761691682857.7517745-CDS-L-elsbetiae_contig115:6233..6376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 6234..6376 +
1622815355.8611815-CDS-L-elsbetiae_contig115:7802..78881622815355.8611815-CDS-L-elsbetiae_contig115:7802..7888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 7803..7888 +
1691682857.762479-CDS-L-elsbetiae_contig115:7802..78881691682857.762479-CDS-L-elsbetiae_contig115:7802..7888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 7803..7888 +
1622815355.871694-CDS-L-elsbetiae_contig115:8392..84951622815355.871694-CDS-L-elsbetiae_contig115:8392..8495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 8393..8495 +
1691682857.7771993-CDS-L-elsbetiae_contig115:8392..84951691682857.7771993-CDS-L-elsbetiae_contig115:8392..8495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 8393..8495 +
1622815355.8847692-CDS-L-elsbetiae_contig115:9155..93051622815355.8847692-CDS-L-elsbetiae_contig115:9155..9305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 9156..9305 +
1691682857.7938795-CDS-L-elsbetiae_contig115:9155..93051691682857.7938795-CDS-L-elsbetiae_contig115:9155..9305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 9156..9305 +
1622815355.894435-CDS-L-elsbetiae_contig115:9741..100421622815355.894435-CDS-L-elsbetiae_contig115:9741..10042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 9742..10042 +
1691682857.8133638-CDS-L-elsbetiae_contig115:9741..100421691682857.8133638-CDS-L-elsbetiae_contig115:9741..10042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 9742..10042 +
1622815355.906911-CDS-L-elsbetiae_contig115:10793..115311622815355.906911-CDS-L-elsbetiae_contig115:10793..11531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 10794..11531 +
1691682857.8267605-CDS-L-elsbetiae_contig115:10793..115311691682857.8267605-CDS-L-elsbetiae_contig115:10793..11531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 10794..11531 +
1622815355.9194446-CDS-L-elsbetiae_contig115:12051..121231622815355.9194446-CDS-L-elsbetiae_contig115:12051..12123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 12052..12123 +
1691682857.8378785-CDS-L-elsbetiae_contig115:12051..121231691682857.8378785-CDS-L-elsbetiae_contig115:12051..12123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 12052..12123 +
1622815355.9314544-CDS-L-elsbetiae_contig115:12674..131801622815355.9314544-CDS-L-elsbetiae_contig115:12674..13180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 12675..13180 +
1691682857.8503084-CDS-L-elsbetiae_contig115:12674..131801691682857.8503084-CDS-L-elsbetiae_contig115:12674..13180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig115 12675..13180 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig115.1316.1

>prot_L-elsbetiae_contig115.1316.1 ID=prot_L-elsbetiae_contig115.1316.1|Name=mRNA_L-elsbetiae_contig115.1316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=831bp
MPTPRTPVTKAVGSSPSLSLSAWVPFQLWRHAWVCVAAAAASLSIAPKGV
SAEQLLEPEVWYHDIATSLATGLAYNSNSGVVYQVGNRYTDIDTGANLVW
GDVYMRGYNIFTRDETFFYSDGTDGETDSWQDVAVDEENGRIFGVGRIYD
PDTDSGALHVRAFNEAGNILWNFQKPEPLGETGIRTDSTFFAAEYDHATG
LLLLAAEGCPAGPCTVRLGFILKVCVVVALDAATGTFKWEQPIVRGFADT
GKGAGIALNGAGVVFVGGGFDAGVESTRSDLLIAALEVETGKVIWEWHHG
TIHADGLNAIAYDDGSGILYACGYTAGDFSEPLDPVSKPEDAVVLALDTS
TQELLWLKSFSSGPDVDRIDAALAITFDRNGVLHVSGRTTGKGFSTDGRE
GVDDPSIKTRHTVAVHFVMSLNAADGEALVGFQSVEPVVSSLDASVMAPD
TAEGDLYLSGRIGTKQDAAGIMYVRTRPTLPPTPAPTTPAPTTPAPTTPA
PTTPAPTTSAPSTAAPTTPAPTTPAPTTPAPTTEAPTTSAPTTAAPVTPA
PTTPAPSTPAPSTAAPTTSAPTTAAPVTPAPTTPAPSTPAPTTPAPSTAA
PATPALTTAAPVTPAPSTAAPTTAAPTTVAPATPVPTEAPTPIPSPSPVT
ADTPSPTNAPTEAPTPTPSLSPVTAETPLPATPAPSTPPPSTTPAITEPP
TAAPITITFPPTPAAEATPSSVRVTPAPITPPTFSPETPSTLSPVQPPPT
PSPTREANAAGVDPNGDGDDSTGLTEGQQILTLFGGLFLGGVVASLVVIL
AQLRKGGGTYDEGDDIGDDPTSVDGTETDV*
back to top

mRNA from alignment at L-elsbetiae_contig115:3930..13408+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig115.1316.1 ID=mRNA_L-elsbetiae_contig115.1316.1|Name=mRNA_L-elsbetiae_contig115.1316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9479bp|location=Sequence derived from alignment at L-elsbetiae_contig115:3930..13408+ (Laminarionema elsbetiae ELsaHSoW15)
GTGAGTGAAAAACTCGTGTCTAGCTAGGCTGGCGTTGACACCACTTGCTC
GGGCACACCGTAACACACAAATGCCGACCCCCCGAACACCAGTCACTAAA
GCTGTGGGGAGCAGTCCCTCTCTATCGCTGTCGGCATGGGTACCTTTTCA
GTTGTGGAGGCACGCTTGGGTCTGTGTTGCTGCGGCGGCGGCATCTCTCT
CTATCGCACCGAAAGGTGTATCGGCTGAGCAGCTGCTGGAGCCAGAGGTG
TGGTACCACGATATCGCGACGTCTTTGGCTACGGGTCTTGCATACAACTC
CAATTCTGGTGTTGTATACCAGGTTGGAAACAGGTGTGTGTTGTATTTTT
TTTTCCTCGAAATCGCTTTCATTTTTTGAGGACGAATATCTATGTATGTA
GTCTACAAGATCACCCTTCGGAGCGAGCTCATGAGAGTACATGGGGCGGG
GGTGATGTAAGACGAAAGAAAAAAGAATAACCCAGATCTTTGAACCAAAG
ATTCTTAACTCGAATGCCTCTTGTCCCGCAAAAAGCAGGTCCCGTCCTTA
TCTAAATAATCGCCATGTTATAGATCAGACGTAACAGCTGCCCTCCTAAG
CACAGCAACAGCACCAACCGGGTGCTTCTGTGTGGGCGCTCCGCCCTTGA
TCAACACGCCCCGCCTTTGTCAGCACAGCTGTGCAGGTCAACACAGCTGC
GCAGGCCTGTGCCCCTCAGCCGTATGTTATTGGTACCGGAAAAAAAAACA
GCTGCTGCCCTGACGTGTTTTTCTTCAACTGCAAGAGCAGCTGCTGTCAT
CCTGACGTTCGTTTGGACCATTGAGTACCGACAGCGTACTGATAATATAT
CGGAACAGTAGTTTTCCCGTTCAAATCTATCATTGTATTTAATTTATGTG
TATCGTAGGTGGATGGTAGATATTTGCTTTTTGTTCTGGGTGTTTTTTCA
AGCCTAACATCTCGTATAATAGCTATCTAGTCTAGACTGGTCTACAATAT
CAGTTTATACCAAGTAGACTAGACTTCGACGCATCTATCTATCTAGACTA
GATATGTAGCGTACATACTGTATCTAGATAAGCTAGAGATACTCCAGATA
CTATGTGGATTATCTACACGTTTTCAACCGCACTCTGAAGTCTACTCGAA
CCTCGATAGATACCTAGAAGATACACGATAGATACATAGGATAGCTGGAC
TAGCCTACCTATCTAGACGTATCGTACACATCACCCACCTTCAGGAATAT
ACCTTATCTAGTCTCTATGTTTGAGGAGAGGGTGTGGGATCGAAGCGCGC
CTGGGATGCGAAAGAAAACGATGAACATCTGTAGTAACTACTTTGATATC
CCGGGAGCGCGACGTATGTATTTTCATATGTACAAGAAAAAAAGGCGCAG
CTTTAAAAACGGCACACCGTTGCCTGGAGACACAGCGGCAGAAGAGTTCT
TCTCGTACATATGTGCAACCTCGGTCTTTGATCTGTAGGCTGCATTCATC
CGCTTTTATCCGGAGATGGCTTGGGGTTCGACTTTGGTTGTCGACTCTAG
TCAGCATGGCTCTCATTGATTTCTCACTTGCTGCTTCAATCGTGAGGGGA
ACCCTCTCTGACCATCGTGAGCATCGTCTTGATTTCTGTTTTAGTGTTAT
GTAGCCTGGATGGAAGTTGTTTAGAGCGAAAAACTGACCTCGCGGCGAAA
GCCCCATAACCGCATTACTACTTCCACAAATAACATGACATCCCGCGTTC
AGGTACACGGACATCGACACAGGGGCCAATCTGGTATGGGGAGATGTGTA
TATGCGCGGCTATAATATCTTTACGAGGGACGAGACCTTCTTCTATTCTG
ATGGTACCGACGGCGAGACAGATTCGTGGCAGGGTGAGGCATACTAGATA
GGCGAGTTTGTTTTTTGATTTTATTTTCTACCAAATAACGCCTTGGCCAA
CGACCCCAATCAGCGTCTCGTGGCGCCCGAGCTGAGGAGACCATGTCTGC
TTCTCTTGCGACATTTTCCCAAGGATTCATACAGTAGGCAATCAAATGGA
CGATATTATTTTCAATCACGCTGGTTGTATTGGTATACGTATGTATGTAC
ATGCACTTTTCACCATCTGGTCATGAGTGGGTTGAATCCAGTCTGAAAAG
GAGCTGGCGAAAGTGGAAAATTGAGCGTTACCCCAAGAGAGTGGCACATC
GGATGAAGGACATCTATCAACAGTAATTACCGTCGTTAGAAGGATCCACC
TTTGACACAACCGTTCCCGCATACTTACTGCCACGTGTGGTCTCCTGCAA
GCAGATGTCGCCGTTGACGAGGAAAACGGTCGGATTTTCGGCGTCGGAAG
GATCTACGACCCTGATACCGACAGTGGGGCTTTGCATGTGCGCGCTTTCA
ACGAAGCTGGCAACATACTCTGGAATTTCCAGAAGCCCGAACCTCTGGTA
AAAATGAGTTGCCGTCTTGTGGTTCTTGTTGCTCCTGCTGTTGCCGTCGT
CGGCGGCGTGGCTCTTTTTGGTTGTCATGTCTGACTTTGTTTCTGTTCTG
CAGATACACATGTATGGCTTAAATTGTTGTTGTTGAGCATTCAACCAAAA
TAATACCAATATTAGTACGATTATGAATACCGGTTGAACCCACGAATCCC
GTCTCAAATGTGGCTAGGTTCCCTTTATGATTATCTGATGTGTCTTTCAA
AATACCGCGTGCAACCAGTGTACGTGATACTCGATGTCCAGCACCTTGAG
ATGCAAGCTGCTGTCGATCGTTATGATCCTGTAATAACGGAGAAAATGTG
TTGTTGTTTGTCTCGATATTGGTGGAATAGCAGACGTAAAAAGCAAGCAT
TTTTAATTCAATCGAGAGCACGATTTATAATTGCCGGGTGAGAAGCAAAC
GACTCACACGGCAGCTTCATCACAAAATATTCCTGACCCACTTTTTTCAT
GCCAAGCGACCGTCGAAAAATACCACGTCTATTCTTCTCATGAGACAGAT
ACTATCATTGAAACTCTAAACTTCATGACATTTTCGTGGGATCGAAAGGC
GATTCAGACGCTATATTAGGCGTTTTGTATGTAGCATAATCACAATGCCT
GAGCAGCTCCTGTGCATTGTCCAGGAAAGGCAGGGTTTGAAGAGCGCTGA
TCAGGAAGATCGTGGTAAATAATCGACACTCGGAGGCAAACACATGCTTA
ATGAAATACCAGTCTGACCGGTGATATAGCTGGGATTCGGAAATCCGGAA
ATATTGCTGGGATTCTAGTTAGTAGGCATGATCAACACATATTTGGCTTG
TGAAACTCCGCAGCAATGCTCCCACAGCCTGTTGAAGATGGAAACATGTG
AAATCACCACCGAAAAAGCGGGGATAGATCGTTATCGCCCCCCCCCCCCC
AGTTTCCCACGACTTTTCTGGTAAGGAAAATCAACATTTTTCAACACGGT
ACGACTTCAAAAAAACGTTTTTTTGAACCATTTTTTTTTTGTTGTCTGTT
AGCCCCCTGGCCTCCTGCGCCGATCCTGCCTGCTTTAATTTAACACTTAC
GATGCTTTCAACCGGTGAAAAAAAAGATGTAAGTAAAGTTGGCATTTCGT
GCGCAAAAAAAAAATTGGAAAAACAAATGGAAAAAATATATATTGTGTTA
AAAGTTTTAGTAGAAGAAATGACGTTTTCGGGGCTCGAACCCGCGTCTCA
AAACTCGAAGTCTGGGCGAAGATATTATCTTTCCCGTCGAATCCCAGCTA
TATCACCGGTCAGACTGGAATCTCGACGAGTCTGACGTCAACATCCCCCA
CAACCGTATGCTGCAATTTCGTCCAAGTCCCATCTCCAAAAGTCGTCTTC
GGTTCGATGCTCCATACAATCAGGGAGAGACGGGGATTCGCACGGACAGT
ACCTTCTTCGCTGCCGAATATGACCACGCCACGGGACTTCTACTCCTGGC
CGCTGAAGGGTGTGTATCACCACTTAATACTTTTTTAAAGCAAGCATCCT
TGTAGTACATATGTATGTACTCCCCCGCCTTCAAAATATAATGTGAGTGA
GACACAAACCTGCGTGAACATAGCTTGGGTGCGTATGTATGTGTGTAGGT
TCGCCTGCGAGGAATCGAGCACCCCCCTCGGGTGCTCTTACGCGCCTTCG
AGTTCAGGCTAGGAGTAATGGCTGCTCACGACGTCGTCACTGGCAGGCGC
GTTCTACCAACGCGTTGTTTGTGCTTGTCCCACAGACGAGTTTATCGAGG
GGGCGCTTCTGTGGAAACTTCAATCTGATGGCCGCGACAGGGTGCCGGGG
AATCCCCCATCGTGGGCGTACTTTTGTTTCGGGGGCGCAGGAAGAGGCCA
CTTTTAAACCGCACTCGCCGCTGCAAACGGTCCAGAAAGAAGGATGATCG
TTTCCTCGTTTGGTGGTTTCTTGCTCCCCCCAATTTCTATCCGAACTACG
ATCGCTCCCATAGGTGCCCAGCAGGGCCCTGCACGGTCAGGCTTGGCTTC
ATACTTAAGGTCTGCGTAGTGGTCGCCTTGGACGCTGCTACAGGAACTTT
CAAGTGGGAACAGCCAGTGAGTCAGTACACTATACCCGTCATGCTAGATC
GATCAGAGATTTAGTCGGTTGAAGGAGCGGGCTCAACAGCCAATCGTCGA
CCTATGCCGCTTATGTAGGGTCTACAACAAGACGCACATCGAAACAGAGG
CATATTTTTTTGCGCTTTGGTTAGGCACGTTAGATAGTCGGTTAATACCT
TGCTTGCTGGGCTAAGTTACTAAGTTATGTAGAAATCGATGCTCTAGGAA
GTTTCCTGTTTCTCTGCTTTGCTATTGGCTGACTCTTAAGCTATCCAGGA
AGTGGGTGAACGTTTGCAAAGGCTGCACATACCGGCCTTACCGACGTAAG
AAAACGATATCCGCCGAGTTTTGAGTTGGTCGAAAACACCTACCATATGT
ACGAATAGCGTAGTAAGGTTATTCTTCGGTTTCAATATACGGAACGGTGA
TACGGCCTTTCAATTTTCGTGTGAATAGGTACATACTGTGCCGAAGTGGT
GCGTCGCCTCTGTTTCCGGCCCCTCCGGCAATCCCTGCCCACTTCTACCA
GAATTGTGCTACAGCTATGTACATAGCTCGATTCCTGTGGTCGTTGGTGA
AACGAGCACGCTGTCGCTTATTAGTTTGACGCCCCCCCCGTTCAATTTGC
CTGCTATGCTGGCGTAAACGAACAAGATTGTGCGCGGTTTTGCAGATACA
GGGAAAGGGGCTGGCATAGCGCTGAATGGAGCCGGCGTGGTCTTCGTCGG
CGGCGGGTTTGATGCTGGGGTCGAAAGTACTAGGTCTGACCTTCTCATCG
CAGCTCTCGAGGTGGAAACAGGGAAGGTGAGGCGGTTCGAGTGAGTTTCG
CGCTGTTGCTGCTGATGACGTCTACGTTGCCGTCATTGTCCTCCTCATTG
ATCGTGGGGATGGGGGGTGGGGGCGATGGTTGTTGTCGATACAACAGTGT
CTTGAAATGCAAATACAATTCACTTTAACAGTCATGTCTTCTGCGCCCTG
TATCTCCAGTGATATGTCTATCCTCACGCGGCTGGTTGAAAGTTTTTCCA
CGAACATCCTGAACGTGTACAGTCAATAGAAGGGTGTTGTTGTTCCCAAA
TACCCTTCCAGGGGGTGGGTTAAGCATCGAAGAAAGGTCTCCGCGCTACG
CACAAGTGTATCAACTGACCACGCTAATCTCCCGTCAGAGACGACCCGAA
AACACGCCGACCGGCATGCAAACGCCCTCTTACTCACTGTGATCGTCATA
TTTACATAATAGGTGATTTGGGAGTGGCATCACGGTACCATTCACGCGGA
CGGGCTCAACGCTATCGCTTACGACGACGGCAGCGGAATCCTCTACGCGT
GCGGGTACACCGCCGGAGACTTCTCCGAGCCTCTGGACCCGGTCTCAAAG
CCCGAGGATGCGGTTGTCCTTGCCCTCGACACGTCGACACAAGAGCTTCT
CTGGCTCAAGAGCTTTTCCTCGGGGCCTGATGTGGACCGCATTGATGCGG
CCTTGGCTATTACTTTCGACCGCAACGGCGTGCTCCACGTATCTGGAAGA
ACGACTGGAAAAGGTGTGTTATATTCTAGCTAAATACATAGACTCTCTGT
TTTTGCCGTCCTCTCAACGTTTAGAAGTTCCGGTTCATGTTTGTTCCGTA
CTCGCACGCTCACAAAGACTATCCGTCACCTGAGAAATGCAAAGCCAGTA
CCGCAAGCCTCTCAGAGTTCGCCTCGGGGATGCGGAAATAGATTTCGGTT
AAAAACACGAACTCCACGAATCAGCGGGATAAACGCAGTCGTGCACATGA
TGAACACCCGGGGCGCACCCCAAAAGACAGTCCAATGAACAAAGCCCCGC
GGCTAGCTCAAAGATCGAGGACTTGAAGGCATCATCATTAAATAAATCAT
TCACCCCGGGGCTGGGTCAAAGGCGTTTGCTCGGCCAAGAAAGGTTTTTG
GGCGATAGGGAGGCAAACTCTGTCCGGGGGCAAACTGAGGCTGAAGTTAT
TGCTCAGGAAATATGCTTGATGGCCTCTACGACTTGTGCCGCTGCTCGTT
GAGGGTTCATGTGTCGTGCACTTTCTTCCAGAGAGATGCACTGGGAGGGG
ACTTACATACAGCATAGTTTTATGTTACCCTGCTTTTGGCACAACTGTGT
TATATACCAGCAGCTCGAAGGTATCACCTTTATGAGGCAAGATGTCGATT
GCTTGCCATATTTGCCTCATATCTGTGGGCAAATGCTCCCCGCAATTTGT
TTTCGTTTTTACCGCGAACCCCGTGGCGATCTTTTTCCGGTGCTTGGGCA
ACCAAAATTGAAAGGTTTCAGTACCGACGGCAGAGAGGGCGTCGATGATC
CCAGCATCAAAACCAGGCATACGGTAGCCGTGCATTTCGTCATGTCGCTC
AATGCCGCGGACGGAGAAGCCTTGGTCGGCTTCCAGTCCGTAGAACCTGT
CGTGTCAAGCCTGGACGCCAGCGTCATGGCTCCCGACACGGCTGAGGGAG
ACCTCTACCTGTCGGGAAGAATTGGAACCAAGCAAGACGCCGCCGGAATC
ATGTACGTCCGCACACGGCCGACTTTGCCGCCGACGCCGGCCCCAACCAC
GCCAGCTCCAACAACGCCCGCTCCAACAACGCCAGCTCCGACCACCCCAG
CCCCGACTACATCCGCCCCGTCTACCGCGGCTCCCACTACACCGGCCCCA
ACGACGCCCGCTCCAACGACGCCCGCTCCAACGACCGAAGCTCCAACCAC
TTCAGCTCCGACTACTGCAGCTCCAGTTACGCCCGCACCAACCACGCCCG
CCCCCTCTACCCCAGCTCCATCGACCGCGGCGCCAACCACTTCAGCTCCG
ACTACTGCAGCTCCAGTTACGCCGGCACCAACCACGCCAGCCCCCTCTAC
CCCAGCTCCAACGACGCCAGCCCCTTCGACCGCAGCTCCAGCCACGCCAG
CTCTTACCACCGCAGCCCCAGTTACGCCAGCCCCCTCGACCGCAGCTCCA
ACCACTGCAGCTCCGACAACCGTGGCCCCGGCTACACCGGTACCGACTGA
AGGTGGGGCTATATATGAAGTAAGTCCAAACCACTCAATATAGCAGATTG
CTGAAGGGCAAAACACTCGCAGGTTGCTCGTAAGTTGCTCTCCAATAGCC
ACCCTTAGGCGGACCGAGGTGTTTCACGGTCTGGGTAGGAATACACTACA
TGTCCGAGGGCTGTCCGTGCGAGAGCTTCGGGGTTCGGTGCTGTTTTGCG
TACATAAGGTTATGACCAGGCCGCCATGGCAGGTGCTTCGAGAATGGTGA
GGATATGAAAGGTTTCCCCATCATTTTCGTTGTCGTTATCCCACTTGAGC
AACACAACGGAGGCAAATCGTCCCGGGGAAATGGTACAGCACTACATAGG
CACAGCCTGAAGCGAAAGAAAGCGTGTCACGCGTACATATTCGAAAGCCT
GAGGCTTGTGATGACCCCAAGTTGCCGTTAGCTATCCGGTGCCGCAGGAA
TCCCTCAGTCCCGTCGATGCTTCATTCTTGCTGCCCGGCTGCCTCTTGTG
CCGTTGTTCTTTTTTATTGCAGCTCCGACTCCGATTCCATCGCCTTCCCC
TGTCACTGCGGACACCCCATCACCCACCAATGCACCGACCGAAGGTAGGG
CCTCGGAGTAAGTGTGCCAGAGCATGTAATAGACGTTGTCGTCCTAACAC
GAGCACACGCACACTCAGACTCTTGACCGGTCCCTCTTGTTGCGTCTTCA
AAACACGCGGATGAAGCATGTAGGCACGCAGGACAGTATACGCACGTACA
TACCCAGTAGGGGCTAATGATGTGTCCGAATGTCCAACGGTACTTGCTGG
CCATATTCAGCCACCAACCCCTGACTCTCTGGGCTTTTCTAAGCAGGGGG
CGATGGGTTTCGCGGAATATTATAAACACTCTCGTGCAATATGGGCGTGT
ATGTAGAATGCATCAGAGCTCGACGCGGGCGAACACCGCAAGCAGTGTTC
TGCTGTGCGCCCTCAGCGGCACGCTCAGCCAACTCGCTGAAACATGCGGG
TTTTTCTGAACTCGAAATTGTTTTTTTTGTTTTTTCCCATGAAGTTGGGG
GCCATTTGCAGAGTGCAAGGAATAATATACATAGACTAGTGTGTCTAACT
CTGCTGATTTTTAACTTGCGCCCGCCTTCCACCTGTTCTCCACAGCTCCG
ACCCCGACTCCTTCTCTTTCGCCGGTTACCGCGGAGACCCCACTCCCTGC
AACACCTGCACCTTCCACACCACCCCCGTCAACGACCCCCGCAATCACCG
AGCCGCCAACCGCTGCCCCGATTACTATCACCTTCCCTCCGACGCCTGCT
GCGGAGGCAACACCCTCTTCCGTACGGGTCACTCCCGCACCAATAACACC
GCCCACGTTCTCACCAGAAACGCCGTCCACTCTGTCACCGGTACAGCCAC
CGCCCACTCCCTCGCCAACGCGCGAAGCGAATGCCGCTGGGGTCGACCCC
AACGGTGATGGCGACGACAGTACCGGTCTGACGGAGGGACAGCAGATCCT
CACCCTGTTTGGTGGGTTATTCTTGGGCGGGGTTGTTGCTTCCTTGGTGG
TGATCTTGGCACAGCTACGCAAGGGAGGTGGAACTTACGATGAGGGAGAT
GATATAGGAGATGATCCCACCTCCGTGGACGGAACGGAAACGGATGTGTA
AATCCATACGAACGCGCCTATCTCTCGGCCAACATTAACGGTCGAGCGGT
TCTGAGGACTTCTTAGGCGTTCTTCCGGAAGATATTGAGCAGGAAGCAAA
CGTATTGTACCACCCGCGGTGGACAGTGTCTGCAACTGTGTTCGTTGTTT
TATCAAATATCCTCGTGAATCATTTCCACGTGTCTAGATGGCCTAGGCTT
GCAGGTTGCCCAGACGGCTTCCTATTTGT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig115:3930..13408+

>mRNA_L-elsbetiae_contig115.1316.1 ID=mRNA_L-elsbetiae_contig115.1316.1|Name=mRNA_L-elsbetiae_contig115.1316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4986bp|location=Sequence derived from alignment at L-elsbetiae_contig115:3930..13408+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGACCCCCCGAACACCAGTCACTAAAGCTGTGGGGAGCAGTCCCTC
TCTATCGCTGTCGGCATGGGTACCTTTTCAGTTGTGGAGGCACGCTTGGG
TCTGTGTTGCTGCGGCGGCGGCATCTCTCTCTATCGCACCGAAAGGTGTA
TCGGCTGAGCAGCTGCTGGAGCCAGAGGTGTGGTACCACGATATCGCGAC
GTCTTTGGCTACGGGTCTTGCATACAACTCCAATTCTGGTGTTGTATACC
AGGTTGGAAACAGATGCCGACCCCCCGAACACCAGTCACTAAAGCTGTGG
GGAGCAGTCCCTCTCTATCGCTGTCGGCATGGGTACCTTTTCAGTTGTGG
AGGCACGCTTGGGTCTGTGTTGCTGCGGCGGCGGCATCTCTCTCTATCGC
ACCGAAAGGTGTATCGGCTGAGCAGCTGCTGGAGCCAGAGGTGTGGTACC
ACGATATCGCGACGTCTTTGGCTACGGGTCTTGCATACAACTCCAATTCT
GGTGTTGTATACCAGGTTGGAAACAGGTACACGGACATCGACACAGGGGC
CAATCTGGTATGGGGAGATGTGTATATGCGCGGCTATAATATCTTTACGA
GGGACGAGACCTTCTTCTATTCTGATGGTACCGACGGCGAGACAGATTCG
TGGCAGGGTACACGGACATCGACACAGGGGCCAATCTGGTATGGGGAGAT
GTGTATATGCGCGGCTATAATATCTTTACGAGGGACGAGACCTTCTTCTA
TTCTGATGGTACCGACGGCGAGACAGATTCGTGGCAGGATGTCGCCGTTG
ACGAGGAAAACGGTCGGATTTTCGGCGTCGGAAGGATCTACGACCCTGAT
ACCGACAGTGGGGCTTTGCATGTGCGCGCTTTCAACGAAGCTGGCAACAT
ACTCTGGAATTTCCAGAAGCCCGAACCTCTGATGTCGCCGTTGACGAGGA
AAACGGTCGGATTTTCGGCGTCGGAAGGATCTACGACCCTGATACCGACA
GTGGGGCTTTGCATGTGCGCGCTTTCAACGAAGCTGGCAACATACTCTGG
AATTTCCAGAAGCCCGAACCTCTGGGAGAGACGGGGATTCGCACGGACAG
TACCTTCTTCGCTGCCGAATATGACCACGCCACGGGACTTCTACTCCTGG
CCGCTGAAGGGGAGAGACGGGGATTCGCACGGACAGTACCTTCTTCGCTG
CCGAATATGACCACGCCACGGGACTTCTACTCCTGGCCGCTGAAGGGTGC
CCAGCAGGGCCCTGCACGGTCAGGCTTGGCTTCATACTTAAGGTCTGCGT
AGTGGTCGCCTTGGACGCTGCTACAGGAACTTTCAAGTGGGAACAGCCAG
TGCCCAGCAGGGCCCTGCACGGTCAGGCTTGGCTTCATACTTAAGGTCTG
CGTAGTGGTCGCCTTGGACGCTGCTACAGGAACTTTCAAGTGGGAACAGC
CAATTGTGCGCGGTTTTGCAGATACAGGGAAAGGGGCTGGCATAGCGCTG
AATGGAGCCGGCGTGGTCTTCGTCGGCGGCGGGTTTGATGCTGGGGTCGA
AAGTACTAGGTCTGACCTTCTCATCGCAGCTCTCGAGGTGGAAACAGGGA
AGATTGTGCGCGGTTTTGCAGATACAGGGAAAGGGGCTGGCATAGCGCTG
AATGGAGCCGGCGTGGTCTTCGTCGGCGGCGGGTTTGATGCTGGGGTCGA
AAGTACTAGGTCTGACCTTCTCATCGCAGCTCTCGAGGTGGAAACAGGGA
AGGTGATTTGGGAGTGGCATCACGGTACCATTCACGCGGACGGGCTCAAC
GCTATCGCTTACGACGACGGCAGCGGAATCCTCTACGCGTGCGGGTACAC
CGCCGGAGACTTCTCCGAGCCTCTGGACCCGGTCTCAAAGCCCGAGGATG
CGGTTGTCCTTGCCCTCGACACGTCGACACAAGAGCTTCTCTGGCTCAAG
AGCTTTTCCTCGGGGCCTGATGTGGACCGCATTGATGCGGCCTTGGCTAT
TACTTTCGACCGCAACGGCGTGCTCCACGTATCTGGAAGAACGACTGGAA
AAGGTGATTTGGGAGTGGCATCACGGTACCATTCACGCGGACGGGCTCAA
CGCTATCGCTTACGACGACGGCAGCGGAATCCTCTACGCGTGCGGGTACA
CCGCCGGAGACTTCTCCGAGCCTCTGGACCCGGTCTCAAAGCCCGAGGAT
GCGGTTGTCCTTGCCCTCGACACGTCGACACAAGAGCTTCTCTGGCTCAA
GAGCTTTTCCTCGGGGCCTGATGTGGACCGCATTGATGCGGCCTTGGCTA
TTACTTTCGACCGCAACGGCGTGCTCCACGTATCTGGAAGAACGACTGGA
AAAGGTTTCAGTACCGACGGCAGAGAGGGCGTCGATGATCCCAGCATCAA
AACCAGGCATACGGTAGCCGTGCATTTCGTCATGTCGCTCAATGCCGCGG
ACGGAGAAGCCTTGGTCGGCTTCCAGTCCGTAGAACCTGTCGTGTCAAGC
CTGGACGCCAGCGTCATGGCTCCCGACACGGCTGAGGGAGACCTCTACCT
GTCGGGAAGAATTGGAACCAAGCAAGACGCCGCCGGAATCATGTACGTCC
GCACACGGCCGACTTTGCCGCCGACGCCGGCCCCAACCACGCCAGCTCCA
ACAACGCCCGCTCCAACAACGCCAGCTCCGACCACCCCAGCCCCGACTAC
ATCCGCCCCGTCTACCGCGGCTCCCACTACACCGGCCCCAACGACGCCCG
CTCCAACGACGCCCGCTCCAACGACCGAAGCTCCAACCACTTCAGCTCCG
ACTACTGCAGCTCCAGTTACGCCCGCACCAACCACGCCCGCCCCCTCTAC
CCCAGCTCCATCGACCGCGGCGCCAACCACTTCAGCTCCGACTACTGCAG
CTCCAGTTACGCCGGCACCAACCACGCCAGCCCCCTCTACCCCAGCTCCA
ACGACGCCAGCCCCTTCGACCGCAGCTCCAGCCACGCCAGCTCTTACCAC
CGCAGCCCCAGTTACGCCAGCCCCCTCGACCGCAGCTCCAACCACTGCAG
CTCCGACAACCGTGGCCCCGGCTACACCGGTACCGACTGAAGGTTTCAGT
ACCGACGGCAGAGAGGGCGTCGATGATCCCAGCATCAAAACCAGGCATAC
GGTAGCCGTGCATTTCGTCATGTCGCTCAATGCCGCGGACGGAGAAGCCT
TGGTCGGCTTCCAGTCCGTAGAACCTGTCGTGTCAAGCCTGGACGCCAGC
GTCATGGCTCCCGACACGGCTGAGGGAGACCTCTACCTGTCGGGAAGAAT
TGGAACCAAGCAAGACGCCGCCGGAATCATGTACGTCCGCACACGGCCGA
CTTTGCCGCCGACGCCGGCCCCAACCACGCCAGCTCCAACAACGCCCGCT
CCAACAACGCCAGCTCCGACCACCCCAGCCCCGACTACATCCGCCCCGTC
TACCGCGGCTCCCACTACACCGGCCCCAACGACGCCCGCTCCAACGACGC
CCGCTCCAACGACCGAAGCTCCAACCACTTCAGCTCCGACTACTGCAGCT
CCAGTTACGCCCGCACCAACCACGCCCGCCCCCTCTACCCCAGCTCCATC
GACCGCGGCGCCAACCACTTCAGCTCCGACTACTGCAGCTCCAGTTACGC
CGGCACCAACCACGCCAGCCCCCTCTACCCCAGCTCCAACGACGCCAGCC
CCTTCGACCGCAGCTCCAGCCACGCCAGCTCTTACCACCGCAGCCCCAGT
TACGCCAGCCCCCTCGACCGCAGCTCCAACCACTGCAGCTCCGACAACCG
TGGCCCCGGCTACACCGGTACCGACTGAAGCTCCGACTCCGATTCCATCG
CCTTCCCCTGTCACTGCGGACACCCCATCACCCACCAATGCACCGACCGA
AGCTCCGACTCCGATTCCATCGCCTTCCCCTGTCACTGCGGACACCCCAT
CACCCACCAATGCACCGACCGAAGCTCCGACCCCGACTCCTTCTCTTTCG
CCGGTTACCGCGGAGACCCCACTCCCTGCAACACCTGCACCTTCCACACC
ACCCCCGTCAACGACCCCCGCAATCACCGAGCCGCCAACCGCTGCCCCGA
TTACTATCACCTTCCCTCCGACGCCTGCTGCGGAGGCAACACCCTCTTCC
GTACGGGTCACTCCCGCACCAATAACACCGCCCACGTTCTCACCAGAAAC
GCCGTCCACTCTGTCACCGGTACAGCCACCGCCCACTCCCTCGCCAACGC
GCGAAGCGAATGCCGCTGGGGTCGACCCCAACGGTGATGGCGACGACAGT
ACCGGTCTGACGGAGGGACAGCAGATCCTCACCCTGTTTGGTGGGTTATT
CTTGGGCGGGGTTGTTGCTTCCTTGGTGGTGATCTTGGCACAGCTACGCA
AGGGAGGTGGAACTTACGATGAGGGAGATGATATAGGAGATGATCCCACC
TCCGTGGACGGAACGGAAACGGATGTGTAACTCCGACCCCGACTCCTTCT
CTTTCGCCGGTTACCGCGGAGACCCCACTCCCTGCAACACCTGCACCTTC
CACACCACCCCCGTCAACGACCCCCGCAATCACCGAGCCGCCAACCGCTG
CCCCGATTACTATCACCTTCCCTCCGACGCCTGCTGCGGAGGCAACACCC
TCTTCCGTACGGGTCACTCCCGCACCAATAACACCGCCCACGTTCTCACC
AGAAACGCCGTCCACTCTGTCACCGGTACAGCCACCGCCCACTCCCTCGC
CAACGCGCGAAGCGAATGCCGCTGGGGTCGACCCCAACGGTGATGGCGAC
GACAGTACCGGTCTGACGGAGGGACAGCAGATCCTCACCCTGTTTGGTGG
GTTATTCTTGGGCGGGGTTGTTGCTTCCTTGGTGGTGATCTTGGCACAGC
TACGCAAGGGAGGTGGAACTTACGATGAGGGAGATGATATAGGAGATGAT
CCCACCTCCGTGGACGGAACGGAAACGGATGTGTAA
back to top