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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 356 |
| Cds size | 354 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815355.234822-CDS-L-elsbetiae_contig11490:2263..2379 | 1622815355.234822-CDS-L-elsbetiae_contig11490:2263..2379 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11490 2264..2379 + |
| 1691682857.4501288-CDS-L-elsbetiae_contig11490:2263..2379 | 1691682857.4501288-CDS-L-elsbetiae_contig11490:2263..2379 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11490 2264..2379 + |
| 1622815355.2521048-CDS-L-elsbetiae_contig11490:4335..4573 | 1622815355.2521048-CDS-L-elsbetiae_contig11490:4335..4573 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11490 4336..4573 + |
| 1691682857.4585457-CDS-L-elsbetiae_contig11490:4335..4573 | 1691682857.4585457-CDS-L-elsbetiae_contig11490:4335..4573 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11490 4336..4573 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11490.1308.1 >prot_L-elsbetiae_contig11490.1308.1 ID=prot_L-elsbetiae_contig11490.1308.1|Name=mRNA_L-elsbetiae_contig11490.1308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp
PYGAESGSGSGSTPRQDQGYDANTLAFSPQDQGSYHHQHSSSSSGGGSTT
KRARLDAHALPAHHRDFQYSGVATTIATSAAAAAVAAASAAAGGDLRRAQ
GGSGIAGASAAAGLPYDD back to topmRNA from alignment at L-elsbetiae_contig11490:2264..4575+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig11490.1308.1 ID=mRNA_L-elsbetiae_contig11490.1308.1|Name=mRNA_L-elsbetiae_contig11490.1308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2312bp|location=Sequence derived from alignment at L-elsbetiae_contig11490:2264..4575+ (Laminarionema elsbetiae ELsaHSoW15)
CCGTACGGAGCAGAGTCAGGGTCGGGATCAGGATCGACGCCGCGTCAGGA
TCAGGGCTATGATGCCAACACCCTGGCCTTCTCGCCTCAAGATCAGGGTT
CCTACCATCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAACCCCAGGTATGTGTGTAATATTTACTTCCTCTGACACGACATGA
GAGATGAGCTAGCTCGACCATGGTGCGGCGCAGATCATATCTTTTGAACG
GAAGGCTGTATGATGCTATAGTTAGGCTCATTCAAAATATGCAGTCACAG
AGATGCTCATCATGAGAAAAAGAGAAACAAAATGTTCGACGTGTTTTTGC
TGGGAAATTGTGGGTTCAATTTGGACCAAATTTCGGCCGATTTCGGCCTA
TTCGTACACTTTTTGGCCGAAATGTAGCGAAGTTTGTCTAATTCCGCGTG
GCACACAAGCCAAAAATATGATGACACATTTTCGCACAAGACGTGGGTAT
TGTCCATCTGTAATGAATCGCAAACAGGATCCGAATTTAGCGGTTTTCAG
TGTTTTTTTTTTATCATTAATGCATTTTCAACTGTCGTCTCTTATGTTTG
GGAAAGGGGCAAAATAGGACCGTTTTTGGGCCCACTCTTTTCTTTAATTA
ATGCATACAAATGTCAGCAGCCTACGTCCAGTCTGTGAAAAAAGTCGTTC
CAGAGGGAACTGTTGCAGGCATACTAACCCCTTTCTTACCGTCCAAGACA
TACTCGCACAAAATACGTAAAATCCATTTATACACAGTAGTTCGTTGGTG
AAAAATTCATTTCGAACCACTCGTTTTATGTGTGTTGTCCGCTCTTTTTT
TTCGGGCTGCTGAATCATTCACGAGGCTGGCTGCGCAAAAAATACATAAA
TGACGGCATTCAACTCGAAAAACGACAGATTAAGATTTCAAAAATATCGT
CGCCGACGGCATCGAGCACATCTGAGGACCCCGTGTAGACGTAATCGGCC
TCACTAATGTGTCAAGAGGATGCACTTCTATGTATGTCTTTTGCATAATG
AACGACACCCGTCAAGTTAGGTTAGACTTAAAAAAATTCAATGCAGAGGG
GCGACAGCATCAGCTGTTTCTCAGTAAGTACCGGTAGAAACGTGAGGGAT
TTTTAATTAATGCATACAAATGTCAGCAGCCTACGTTCAGTCTGTGAAAA
AGTCGTTCCAGAGGGAACTGTTGTAGGCATACTAACCCCCCTCTTTCCGT
CCAAGACATGTTTTTATCGCCGCAAAACACAGAACTATATTGAGCATGTA
TCAATTTGGCACAAGTAGATAGATGTTTAGCAAACCAGGCGGAAGAGGAA
ACTCCGATACGTCATGCAGCAGTAAATGGCATCCTAACCCTAACCCATAC
CGTAGGGGACATAAGGTACCGCACCCCCTGGACCGAATTTTAGAGCCGCA
TTACTCCGAAACGAAGAGGGTGCCAGCACCAAACGACACATTTTCGGACA
GCCCTCGACTAGACCTTTCCAACGCCACCGCTTTCGGCACTGGCACTCTT
CTTGCTGAGGAGGAATCGAGCTTTGAGAATCTGTCCAGGGTGTGTGATTT
CTTGTGTCACCTACGGTACTAAGCTATCATGGGTACATGTATCATCAGAT
AGGGCATCTGCTGCCAGCACAGCACTCATCAACACAGCAGGGCTTGCCTG
GGAAATTATGTATGGTACGTACGTCTCTTGTGAGCGACGTATACTGCAGG
CTGAACTTTAATAATATCCTGAGATCTACCTGAGATGTGTCCTGAGATGT
GTCCTGAGATGTGTCCCGAGACAAGACAGCTACACACCCGAAGTCATTGC
TGCAAGCGCACCCGCACCGCAGAACCGCCTTTCTCTCTTACCTGTCCGTC
GCTCTCCGCGCGCACGCCTTGCAACGCAACACACCCTCTCTCACGCGCCA
ACGCACACACGCTCCCTTGCTGACGAAAAACCAAAACATAACGCTACCCC
ACCACCGTCAAAAACCGCGACATGAATGAACTAACGAACTCGTTTCATTC
GTCAGGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGCGGCGGCGGCAGC
ACCACCAAGAGAGCCCGCCTCGACGCACATGCCTTACCCGCCCACCACCG
GGATTTCCAGTACAGCGGCGTCGCCACTACCATCGCTACTTCCGCCGCCG
CCGCTGCCGTCGCCGCCGCCTCCGCCGCCGCTGGTGGCGACCTGAGGCGA
GCGCAGGGCGGCAGCGGTATCGCGGGGGCTTCGGCGGCGGCGGGCCTACC
GTACGATGATTT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig11490:2264..4575+ >mRNA_L-elsbetiae_contig11490.1308.1 ID=mRNA_L-elsbetiae_contig11490.1308.1|Name=mRNA_L-elsbetiae_contig11490.1308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=708bp|location=Sequence derived from alignment at L-elsbetiae_contig11490:2264..4575+ (Laminarionema elsbetiae ELsaHSoW15)
CCGTACGGAGCAGAGTCAGGGTCGGGATCAGGATCGACGCCGCGTCAGGA
TCAGGGCTATGATGCCAACACCCTGGCCTTCTCGCCTCAAGATCAGGGTT
CCTACCATCACCAGCACCGTACGGAGCAGAGTCAGGGTCGGGATCAGGAT
CGACGCCGCGTCAGGATCAGGGCTATGATGCCAACACCCTGGCCTTCTCG
CCTCAAGATCAGGGTTCCTACCATCACCAGCACAGCAGCAGCAGCAGCGG
CGGCGGCAGCACCACCAAGAGAGCCCGCCTCGACGCACATGCCTTACCCG
CCCACCACCGGGATTTCCAGTACAGCGGCGTCGCCACTACCATCGCTACT
TCCGCCGCCGCCGCTGCCGTCGCCGCCGCCTCCGCCGCCGCTGGTGGCGA
CCTGAGGCGAGCGCAGGGCGGCAGCGGTATCGCGGGGGCTTCGGCGGCGG
CGGGCCTACCGTACGATGATCAGCAGCAGCAGCAGCGGCGGCGGCAGCAC
CACCAAGAGAGCCCGCCTCGACGCACATGCCTTACCCGCCCACCACCGGG
ATTTCCAGTACAGCGGCGTCGCCACTACCATCGCTACTTCCGCCGCCGCC
GCTGCCGTCGCCGCCGCCTCCGCCGCCGCTGGTGGCGACCTGAGGCGAGC
GCAGGGCGGCAGCGGTATCGCGGGGGCTTCGGCGGCGGCGGGCCTACCGT
ACGATGAT back to top
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