mRNA_L-elsbetiae_contig11484.1304.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 1.680e-155 Identity = 225/243 (92.59%), Postives = 234/243 (96.30%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFA+CMLEDKGD+LKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSG IYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTA+Y+EPANI IPCDLAFACSHRNE+D+T ATLLADTGCSAVIEGASAPCTKAAKA+FRKRGL FAPHVATL GSGIVSGLALATNP+ AKENI+DRVEEKMK IF DVKATATEFNAR Sbjct: 260 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPVGAKENIHDRVEEKMKDIFADVKATATEFNAR 502
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA) HSP 1 Score: 327 bits (837), Expect = 3.390e-107 Identity = 159/243 (65.43%), Postives = 197/243 (81.07%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GYLYGQYKR+NDHVAQ+GRGVLWGG YPE G+GVV FA ML DKGD+LKGKRCL+TGSGK+A+ +A KLL+LGAIP++FSDS+G I E +G D+AKLRT+V IK+ERGAR+GRYII+STTA++++P I +P D+ FA +HRNEID A LA+ GC AVIEGA++PCTKAAKA+FRKRG+ F PH+ATL G+GIVSG L++NPL ++I+ RVEE+M IF DV TA EFN R Sbjct: 217 GYLYGQYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLPGQSIDRRVEEQMARIFADVNNTAKEFNTR 459
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA) HSP 1 Score: 294 bits (753), Expect = 3.630e-94 Identity = 143/243 (58.85%), Postives = 188/243 (77.37%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GYLYGQYKR++ H AQ+G+G+LWGG P+P+AT GVV +A +LE KGD+L+GKRCLITGSGK+A+HVAEKL+++GA+PLT SD+SG +YEP+GID+AKL+TI+KIKSERGAR+GRYIIASTTAKY+EP N+ S+P DL F C+ NEID AT+LAD G V EG+ PCT A +IF+KRG+ HVATL I +GL L+ + S + ++ R++E + +I+ + KATA EFN R Sbjct: 248 GYLYGQYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGKMALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGRYIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKSSPSMHD-LDGRIKEAVDSIYLEAKATAKEFNVR 489
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK) HSP 1 Score: 284 bits (727), Expect = 3.440e-90 Identity = 136/243 (55.97%), Postives = 180/243 (74.07%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GY+YGQYKR ++H++ GRG+LWGGA P+P TG+GV FA+ MLEDKG++LKGKRCLITGSGK A VA KLL+ GA+PLTFSDSSG IYEP+G+D+ K + + KIK+ERGAR+GRYIIASTTA+Y+EP ++ IPCDL F C NE+ A +AD G V+EG + PC+ A +F+KRGL FAP+ ATL G+ +V+G ALA N ++++ +++++V M VK TA EFN R Sbjct: 253 GYMYGQYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKNAQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGRYIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRIASEADMDEQVARVMARTHALVKDTAQEFNLR 495
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA) HSP 1 Score: 261 bits (667), Expect = 6.640e-82 Identity = 129/243 (53.09%), Postives = 174/243 (71.60%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GY+YGQYKRI D A++G G LWGG +P+ A G+GV FA+ ML DK +TL+GKR LITGSG +A+ VAE+LLQ GAIP+TFSDSSG IYE +GID++KL TI IKSERGAR+GRYI+ASTTAKYS+P +I SIPCD+ C E+ D+ A L GC A++EG S+PCT A R+ G+ FAP+ ATL + SG AL ++ ++ E+++ + + + +++ V+ TA+EFN R Sbjct: 192 GYMYGQYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGNIALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGRYIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSITTAEDLDRALADTVDRVYSKVQRTASEFNTR 434
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN) HSP 1 Score: 258 bits (659), Expect = 1.150e-80 Identity = 134/244 (54.92%), Postives = 175/244 (71.72%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLC-GSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GYLYGQYKR +H A+ GRG+LWGGA+P+PE GY V FAK ++E +G++L GKRCLITGSGKVA+ VAE+LL LGA+PLTFSD+SG IYEP+GI + K I IK+ERGARVGRYIIASTTAK++EP +I SIPCD+ F + R EID A LAD GC+AV++ AP T +A ++K G+++ P A+L G+ I S ++ + KE + D V+E+ K IF + K TA E+N R Sbjct: 198 GYLYGQYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGKVALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGRYIIASTTAKFNEPEDIYSIPCDIVFP-TIRGEIDADVAARLADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASLAAGTAIAS---TSSERVIYKEAVIDAVDEEAKRIFEEAKRTANEYNVR 437
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI) HSP 1 Score: 257 bits (656), Expect = 2.100e-79 Identity = 122/241 (50.62%), Postives = 166/241 (68.88%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFN 723 GYLYGQYKR++ + GRG+LWGGA+P+PE GYGVV FA+ + +G++L GKRC++TGSGKVA+HVAEKLL+LGA P+TF+DSSG ++EPEG D K + I KIK ERGARVGRYI+AS +AKY+EP ++ P D+AF C NE+ + A L +GC V++G P + AA + +K G+ P+ T+ G+ I G L NPL E I+DR+E+KM ++ + A EFN Sbjct: 267 GYLYGQYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQPGETIDDRLEKKMDEVYEVASSVAREFN 507
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A6V2ALV2_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2ALV2_9STRA) HSP 1 Score: 255 bits (651), Expect = 7.270e-79 Identity = 133/243 (54.73%), Postives = 168/243 (69.14%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GYL+GQYKRI + G+ L GA + +A GYG+V FAK ML DKGDTL+GKRCLI G+GKVA VA+KLL+ GAIPLTFSD SG +YEP+GID KL TI KIK+ERGA +GRYIIASTTA++++PA+IL IPCDL F C +IDD A LAD GC VIEG T +A+ + +KRGL + PH T+ GS IV L K+ ++++ ++ I++DVK TA EFNAR Sbjct: 257 GYLFGQYKRITARSSSNGKPFL-AGAGSFFQAPGYGIVHFAKEMLNDKGDTLQGKRCLILGAGKVARSVAQKLLEYGAIPLTFSDESGHLYEPDGIDDGKLATISKIKNERGAHLGRYIIASTTAQFNDPASILDIPCDLCFPCHKMKDIDDAAANKLADNGCMGVIEGGHNTVTPSARKVLKKRGLMYGPHTLTMTGSAIVHALG--------KKGTDEQLAAEISRIYSDVKLTAEEFNAR 490
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A7S2E2V9_9STRA (Glutamate dehydrogenase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2V9_9STRA) HSP 1 Score: 251 bits (641), Expect = 1.300e-77 Identity = 128/245 (52.24%), Postives = 171/245 (69.80%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRN-EIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSG-IVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729 GY+YGQYKRIN VA RG G+LWGG M + A G+GVV FA+ ML DK D+L+GKRC++TGSG +A+ VA+KL +LGA LT SDSSG+IYE +G+D ++L TI KIK+ERGAR+GRY+++STTAKY EP+ I ++PCDL F CS ID+ A LAD C VIEG P T A +++RG+ P+ A+L G IV+G ++ + + KE +++R+E + F VK TA EFNAR Sbjct: 224 GYMYGQYKRINSSVAGRGTGILWGGQMKWKAAPGFGVVYFAQAMLNDKSDSLEGKRCVVTGSGMMAMSVAKKLCELGATVLTLSDSSGYIYEQDGLDLSRLDTINKIKAERGARLGRYLMSSTTAKYDEPSEIFNVPCDLVFPCSGSEYAIDEKVANKLADNNCMGVIEGGHMPSTPEAILAYKQRGMLHGPYKASLAAGGPIVNGAQMSVHEFANKEELDERLEAAAQRTFAKVKRTAMEFNAR 468
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A835YWP2_9STRA (Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP2_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.210e-76 Identity = 119/177 (67.23%), Postives = 146/177 (82.49%), Query Frame = 1 Query: 1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKA 531 GYLYGQYKR+NDHVAQ+GRGVLWGG YPE G+GVV FA ML DKGD+LKGKRCL+TGSGK+A+ +A KLL+LGAIP++FSDS+G I E +G D+AKLRT+V IK+ERGAR+GRYII+STTA++++P I +P D FA +HRNEID A LA+ GC AVIEGA++PCTKA Sbjct: 236 GYLYGQYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADGVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKA 412 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11484.1304.1 >prot_L-elsbetiae_contig11484.1304.1 ID=prot_L-elsbetiae_contig11484.1304.1|Name=mRNA_L-elsbetiae_contig11484.1304.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDback to top mRNA from alignment at L-elsbetiae_contig11484:3789..6204+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11484.1304.1 ID=mRNA_L-elsbetiae_contig11484.1304.1|Name=mRNA_L-elsbetiae_contig11484.1304.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2416bp|location=Sequence derived from alignment at L-elsbetiae_contig11484:3789..6204+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11484:3789..6204+ >mRNA_L-elsbetiae_contig11484.1304.1 ID=mRNA_L-elsbetiae_contig11484.1304.1|Name=mRNA_L-elsbetiae_contig11484.1304.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig11484:3789..6204+ (Laminarionema elsbetiae ELsaHSoW15)back to top |