mRNA_L-elsbetiae_contig11484.1304.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11484.1304.1
Unique NamemRNA_L-elsbetiae_contig11484.1304.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI)

HSP 1 Score: 451 bits (1160), Expect = 1.680e-155
Identity = 225/243 (92.59%), Postives = 234/243 (96.30%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFA+CMLEDKGD+LKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSG IYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTA+Y+EPANI  IPCDLAFACSHRNE+D+T ATLLADTGCSAVIEGASAPCTKAAKA+FRKRGL FAPHVATL GSGIVSGLALATNP+ AKENI+DRVEEKMK IF DVKATATEFNAR
Sbjct:  260 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGHIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAQYTEPANIFDIPCDLAFACSHRNEVDETAATLLADTGCSAVIEGASAPCTKAAKAVFRKRGLLFAPHVATLAGSGIVSGLALATNPVGAKENIHDRVEEKMKDIFADVKATATEFNAR 502          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA)

HSP 1 Score: 327 bits (837), Expect = 3.390e-107
Identity = 159/243 (65.43%), Postives = 197/243 (81.07%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GYLYGQYKR+NDHVAQ+GRGVLWGG   YPE  G+GVV FA  ML DKGD+LKGKRCL+TGSGK+A+ +A KLL+LGAIP++FSDS+G I E +G D+AKLRT+V IK+ERGAR+GRYII+STTA++++P  I  +P D+ FA +HRNEID   A  LA+ GC AVIEGA++PCTKAAKA+FRKRG+ F PH+ATL G+GIVSG  L++NPL   ++I+ RVEE+M  IF DV  TA EFN R
Sbjct:  217 GYLYGQYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADVVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKAAKAVFRKRGVLFGPHMATLAGNGIVSGFELSSNPLLPGQSIDRRVEEQMARIFADVNNTAKEFNTR 459          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA)

HSP 1 Score: 294 bits (753), Expect = 3.630e-94
Identity = 143/243 (58.85%), Postives = 188/243 (77.37%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GYLYGQYKR++ H AQ+G+G+LWGG  P+P+AT  GVV +A  +LE KGD+L+GKRCLITGSGK+A+HVAEKL+++GA+PLT SD+SG +YEP+GID+AKL+TI+KIKSERGAR+GRYIIASTTAKY+EP N+ S+P DL F C+  NEID   AT+LAD G   V EG+  PCT  A +IF+KRG+    HVATL    I +GL L+ +  S  + ++ R++E + +I+ + KATA EFN R
Sbjct:  248 GYLYGQYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGKMALHVAEKLVEMGAVPLTLSDTSGHVYEPDGIDAAKLKTIMKIKSERGARIGRYIIASTTAKYNEPENVFSVPADLVFPCATHNEIDGVTATMLADMGVQGVFEGSHMPCTNQAISIFKKRGILHGGHVATLAADSIFNGLELSKSSPSMHD-LDGRIKEAVDSIYLEAKATAKEFNVR 489          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK)

HSP 1 Score: 284 bits (727), Expect = 3.440e-90
Identity = 136/243 (55.97%), Postives = 180/243 (74.07%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GY+YGQYKR ++H++  GRG+LWGGA P+P  TG+GV  FA+ MLEDKG++LKGKRCLITGSGK A  VA KLL+ GA+PLTFSDSSG IYEP+G+D+ K + + KIK+ERGAR+GRYIIASTTA+Y+EP ++  IPCDL F C   NE+    A  +AD G   V+EG + PC+  A  +F+KRGL FAP+ ATL G+ +V+G ALA N ++++ +++++V   M      VK TA EFN R
Sbjct:  253 GYMYGQYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKNAQAVARKLLEFGAVPLTFSDSSGHIYEPDGLDAVKFKQVAKIKAERGARIGRYIIASTTARYNEPEDLFGIPCDLVFLCGPMNEVGAAAAQQIADGGALGVVEGCNMPCSPEAIKVFKKRGLLFAPYRATLAGASLVNGTALAHNRIASEADMDEQVARVMARTHALVKDTAQEFNLR 495          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.640e-82
Identity = 129/243 (53.09%), Postives = 174/243 (71.60%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GY+YGQYKRI D  A++G G LWGG +P+  A G+GV  FA+ ML DK +TL+GKR LITGSG +A+ VAE+LLQ GAIP+TFSDSSG IYE +GID++KL TI  IKSERGAR+GRYI+ASTTAKYS+P +I SIPCD+   C    E+ D+ A  L   GC A++EG S+PCT  A    R+ G+ FAP+ ATL    + SG AL ++ ++  E+++  + + +  +++ V+ TA+EFN R
Sbjct:  192 GYMYGQYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGNIALGVAERLLQFGAIPVTFSDSSGHIYEQDGIDASKLATIKHIKSERGARLGRYIVASTTAKYSDPEDIFSIPCDICIPCGPSQEVTDSVAQTLIANGCKAIVEGGSSPCTPDAIVTLRRNGILFAPYKATLSAGAVTSGGALQSSSITTAEDLDRALADTVDRVYSKVQRTASEFNTR 434          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: F0Y860_AURAN (Uncharacterized protein GDH n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y860_AURAN)

HSP 1 Score: 258 bits (659), Expect = 1.150e-80
Identity = 134/244 (54.92%), Postives = 175/244 (71.72%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLC-GSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GYLYGQYKR  +H A+ GRG+LWGGA+P+PE  GY  V FAK ++E +G++L GKRCLITGSGKVA+ VAE+LL LGA+PLTFSD+SG IYEP+GI + K   I  IK+ERGARVGRYIIASTTAK++EP +I SIPCD+ F  + R EID   A  LAD GC+AV++   AP T +A   ++K G+++ P  A+L  G+ I S    ++  +  KE + D V+E+ K IF + K TA E+N R
Sbjct:  198 GYLYGQYKRTTEHYARHGRGILWGGALPHPEVFGYSAVHFAKHLVESRGESLAGKRCLITGSGKVALAVAERLLALGAVPLTFSDTSGHIYEPDGIAATKFEQISTIKAERGARVGRYIIASTTAKFNEPEDIYSIPCDIVFP-TIRGEIDADVAARLADNGCAAVVDAGYAPSTPSAIRAYKKLGMAYGPFKASLAAGTAIAS---TSSERVIYKEAVIDAVDEEAKRIFEEAKRTANEYNVR 437          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: D7G3Q6_ECTSI (Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q6_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 2.100e-79
Identity = 122/241 (50.62%), Postives = 166/241 (68.88%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFN 723
            GYLYGQYKR++   +  GRG+LWGGA+P+PE  GYGVV FA+  +  +G++L GKRC++TGSGKVA+HVAEKLL+LGA P+TF+DSSG ++EPEG D  K + I KIK ERGARVGRYI+AS +AKY+EP ++   P D+AF C   NE+ +  A  L  +GC  V++G   P + AA  + +K G+   P+  T+ G+ I  G  L  NPL   E I+DR+E+KM  ++    + A EFN
Sbjct:  267 GYLYGQYKRMSLDASPIGRGLLWGGAVPHPECAGYGVVYFAEKAMRGRGESLMGKRCIVTGSGKVALHVAEKLLELGATPMTFTDSSGHVFEPEGFDVEKFKKIAKIKQERGARVGRYIVASPSAKYNEPQSVFDAPADVAFLCRTSNELTEVEANALVASGCKTVVDGGYRPVSTAAAEVLKKNGIFHVPYRGTMIGAAISGGRELDRNPLQPGETIDDRLEKKMDEVYEVASSVAREFN 507          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A6V2ALV2_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2ALV2_9STRA)

HSP 1 Score: 255 bits (651), Expect = 7.270e-79
Identity = 133/243 (54.73%), Postives = 168/243 (69.14%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSGIVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GYL+GQYKRI    +  G+  L  GA  + +A GYG+V FAK ML DKGDTL+GKRCLI G+GKVA  VA+KLL+ GAIPLTFSD SG +YEP+GID  KL TI KIK+ERGA +GRYIIASTTA++++PA+IL IPCDL F C    +IDD  A  LAD GC  VIEG     T +A+ + +KRGL + PH  T+ GS IV  L         K+  ++++  ++  I++DVK TA EFNAR
Sbjct:  257 GYLFGQYKRITARSSSNGKPFL-AGAGSFFQAPGYGIVHFAKEMLNDKGDTLQGKRCLILGAGKVARSVAQKLLEYGAIPLTFSDESGHLYEPDGIDDGKLATISKIKNERGAHLGRYIIASTTAQFNDPASILDIPCDLCFPCHKMKDIDDAAANKLADNGCMGVIEGGHNTVTPSARKVLKKRGLMYGPHTLTMTGSAIVHALG--------KKGTDEQLAAEISRIYSDVKLTAEEFNAR 490          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A7S2E2V9_9STRA (Glutamate dehydrogenase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2V9_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.300e-77
Identity = 128/245 (52.24%), Postives = 171/245 (69.80%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRN-EIDDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSG-IVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR 729
            GY+YGQYKRIN  VA RG G+LWGG M +  A G+GVV FA+ ML DK D+L+GKRC++TGSG +A+ VA+KL +LGA  LT SDSSG+IYE +G+D ++L TI KIK+ERGAR+GRY+++STTAKY EP+ I ++PCDL F CS     ID+  A  LAD  C  VIEG   P T  A   +++RG+   P+ A+L   G IV+G  ++ +  + KE +++R+E   +  F  VK TA EFNAR
Sbjct:  224 GYMYGQYKRINSSVAGRGTGILWGGQMKWKAAPGFGVVYFAQAMLNDKSDSLEGKRCVVTGSGMMAMSVAKKLCELGATVLTLSDSSGYIYEQDGLDLSRLDTINKIKAERGARLGRYLMSSTTAKYDEPSEIFNVPCDLVFPCSGSEYAIDEKVANKLADNNCMGVIEGGHMPSTPEAILAYKQRGMLHGPYKASLAAGGPIVNGAQMSVHEFANKEELDERLEAAAQRTFAKVKRTAMEFNAR 468          
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Match: A0A835YWP2_9STRA (Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP2_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.210e-76
Identity = 119/177 (67.23%), Postives = 146/177 (82.49%), Query Frame = 1
Query:    1 GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGDTLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAKLRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEIDDTGATLLADTGCSAVIEGASAPCTKA 531
            GYLYGQYKR+NDHVAQ+GRGVLWGG   YPE  G+GVV FA  ML DKGD+LKGKRCL+TGSGK+A+ +A KLL+LGAIP++FSDS+G I E +G D+AKLRT+V IK+ERGAR+GRYII+STTA++++P  I  +P D  FA +HRNEID   A  LA+ GC AVIEGA++PCTKA
Sbjct:  236 GYLYGQYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETDGFDAAKLRTVVSIKNERGARLGRYIISSTTARFNDPECIFDVPADGVFAAAHRNEIDADRAQRLAENGCLAVIEGANSPCTKA 412          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11484.1304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK56_ECTSI1.680e-15592.59Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax... [more]
A0A836CHL3_9STRA3.390e-10765.43Glutamate dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CY97_9STRA3.630e-9458.85Glutamate dehydrogenase n=2 Tax=Monodopsidaceae Ta... [more]
A0A6V1RCQ3_HETAK3.440e-9055.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RRL7_9STRA6.640e-8253.09Glutamate dehydrogenase n=2 Tax=Rhizochromulina ma... [more]
F0Y860_AURAN1.150e-8054.92Uncharacterized protein GDH n=1 Tax=Aureococcus an... [more]
D7G3Q6_ECTSI2.100e-7950.62Glutamate dehydrogenase 2 (NADP-dependent) n=2 Tax... [more]
A0A6V2ALV2_9STRA7.270e-7954.73Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2E2V9_9STRA1.300e-7752.24Glutamate dehydrogenase n=1 Tax=Dictyocha speculum... [more]
A0A835YWP2_9STRA1.210e-7667.23Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11484contigL-elsbetiae_contig11484:3789..6204 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score450.3
Seed ortholog evalue5.8e-124
Seed eggNOG ortholog2880.D8LK56
KEGG rclassRC00006,RC02799
KEGG koko:K00262
KEGG ReactionR00248
KEGG Pathwayko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.glutamate dehydrogenase [NAD(P) ] activity
EggNOG OGsCOG0334@1,KOG2250@2759
EC1.4.1.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionGlutamate dehydrogenase 1 (NADP-dependent)
Ec32 orthologEc-06_008240.1
Exons5
Model size729
Cds size729
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11484.1304.1prot_L-elsbetiae_contig11484.1304.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11484 3789..6204 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815354.6895523-CDS-L-elsbetiae_contig11484:3788..38811622815354.6895523-CDS-L-elsbetiae_contig11484:3788..3881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 3789..3881 +
1691682857.146976-CDS-L-elsbetiae_contig11484:3788..38811691682857.146976-CDS-L-elsbetiae_contig11484:3788..3881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 3789..3881 +
1622815354.7021341-CDS-L-elsbetiae_contig11484:4635..47341622815354.7021341-CDS-L-elsbetiae_contig11484:4635..4734Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 4636..4734 +
1691682857.1669085-CDS-L-elsbetiae_contig11484:4635..47341691682857.1669085-CDS-L-elsbetiae_contig11484:4635..4734Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 4636..4734 +
1622815354.715655-CDS-L-elsbetiae_contig11484:5005..50951622815354.715655-CDS-L-elsbetiae_contig11484:5005..5095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 5006..5095 +
1691682857.1784556-CDS-L-elsbetiae_contig11484:5005..50951691682857.1784556-CDS-L-elsbetiae_contig11484:5005..5095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 5006..5095 +
1622815354.7272666-CDS-L-elsbetiae_contig11484:5490..55421622815354.7272666-CDS-L-elsbetiae_contig11484:5490..5542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 5491..5542 +
1691682857.1877556-CDS-L-elsbetiae_contig11484:5490..55421691682857.1877556-CDS-L-elsbetiae_contig11484:5490..5542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 5491..5542 +
1622815354.7417958-CDS-L-elsbetiae_contig11484:5809..62041622815354.7417958-CDS-L-elsbetiae_contig11484:5809..6204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 5810..6204 +
1691682857.2036064-CDS-L-elsbetiae_contig11484:5809..62041691682857.2036064-CDS-L-elsbetiae_contig11484:5809..6204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11484 5810..6204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11484.1304.1

>prot_L-elsbetiae_contig11484.1304.1 ID=prot_L-elsbetiae_contig11484.1304.1|Name=mRNA_L-elsbetiae_contig11484.1304.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
GYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFAKCMLEDKGD
TLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGFIYEPEGIDSAK
LRTIVKIKSERGARVGRYIIASTTAKYSEPANILSIPCDLAFACSHRNEI
DDTGATLLADTGCSAVIEGASAPCTKAAKAIFRKRGLSFAPHVATLCGSG
IVSGLALATNPLSAKENINDRVEEKMKAIFTDVKATATEFNAR
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mRNA from alignment at L-elsbetiae_contig11484:3789..6204+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11484.1304.1 ID=mRNA_L-elsbetiae_contig11484.1304.1|Name=mRNA_L-elsbetiae_contig11484.1304.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2416bp|location=Sequence derived from alignment at L-elsbetiae_contig11484:3789..6204+ (Laminarionema elsbetiae ELsaHSoW15)
GGCTACCTCTATGGACAGTACAAACGCATCAACGACCACGTGGCTCAGCG TGGAAGGGGCGTCCTCTGGGGGGGTGCCATGCCCTACCCCGAAGTGAGAT TTGTTTGTGTGAAATGATGGCGTAAAGTGAGAAAGTATGGCATGATTCGG ATGAGCTTCAGCTTCTATGGTGCTCACTCGCCCCAGTGTTCCCATTAGAT TGGCAGTGTCCTTTCGATTGGCGCAGATAAAAGTAAGCACCACACACACT GAACACAACTGGTTTATACTAAATAGTCACGTAGTGTACACAGAAAATTG ATTTTGTTTTGTTTCACTGTTTCGACCGTCTCCCGAACCGGATGTGTGTG TCCTTCCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACCTGTACTA CATCTTGCGGTGTACTTAGAGGTACTACACTTTGCAGTGCATTTGTCTGT ACAACTAGAACCAACCGGGGTCACACAGGAGGGGGTGAACACTGGGCTTT TTTTTTTTTTTTTTTTTTTTTTCCCCACCTTCCTCCTGCAGTGCTTGCCT TCATTTTTATCGCGAGAAGGGTTCAGCTGTCCCTTCACCTCGTCAACGTG ATCACGTCGAAGTTTGGTACTCAGGAGCTTTTCAGCTTTCATCGCTTTCA CCTGCAAAGTCGCAAAATAAACACTTCTGCTTGAGATTGAACTCCAGATA GATGTTTGCAGTTTTTGCCAGAGGACATCCGCGCATGGGCATGCTCTCCG TTCCTCTCTTGTCGAGAAGGCATCATACTTGTACTATGGCAACCTGCCAT ATATCTCAGACATTTCTCGCCAACGGTATCCACGTGCGCTCTGGCAGGCG ACTGGGTACGGTGTTGTGGAGTTCGCGAAGTGTATGCTGGAAGATAAGGG GGACACCCTGAAGGGAAAGCGGTGCCTTATTACGGGAAGCGGAAAGGTGA GCAATGCCGACAAGTGACGAAGATGTTTTATGCTTTTGCAGGCATACCAT TGGTTACAGGGGCGCTTTCAAGTGTGGAAACTAACATTCGACGCGTACTC GTTTCTTGCCATGTGGGCATTGCAGGCAAAATCGCCTCGCACGCCGTAAG TCTTAGAGCTCTCTCGTCACCTGCAGCTAGTTTGTTTCGGAATCGCCCGA TAAGCAGCGTTTACAGTTTTGTGCCGCCCTTGCCGTTATGAAACTCGTAT GGTTCTGATGTCCACAGGTGGCAGTTCACGTGGCAGAGAAACTCTTGCAG CTAGGTGCCATTCCCTTGACTTTCTCCGACAGCAGCGGTTTCATTTACGA ACCAGAGGTAAGAAAGTGATACGAAAGGCTGTCGCTGATGGCTTTGGACA AAAAGTTCGCGCGGCCCTTTTCATGCAGAATGGTCGCATGCCATGTTGCC TGGTCTTGGGTGCCGCATTTTAAAGTTGACAAAACACTCGACAGAGGACC CCTTGCTGAAGCAGATCAGACTCGGTGAGTTTTGCCCTTGAACATCGAAC AGGTCGTTTTGGGCATGGTTTTCGATTAAGTTCCTGCAGCGGCGCTGAGA CTACAGAGCCAAACAGCTCCGAAGGGTCTCAGCTTGTAATTCAAGGGTTG CTGTACACACAACATCGGGAGACTGCTTCTTGTTCTGTGCGCGGTTGTGT GGTACACGAAGCTATACCTCATTCGCGTCGAACGCTGATATCTATTTTCC AGGGCATCGACTCGGCCAAGCTTCGCACAATCGTCAAGATCAAGTCCGAG AGAGGTCGGTGGACACTGGATAAAGGTTCAAAATGAGGTTGTTTGTGTAA ACAGGTGTTCCCGCTTTGGTTATGTGTCTTTTTGTCTCATATTTTTTTAT CTCACGGAGGACCCCGTGGCCTCGGAAGAGGGCGAGGGCTCATTCCACGG ACGTAGGGACTCGACAACCATGTAATGGGAATATGTCTTGTTGACAGCAA AGATCGCCACGCACCCGTGTTCTAGTTCTGTGCAACTTAGTTTTTCCCCC CTTCTCCCGCGATTGACGCAGGGGCGCGGGTGGGGCGGTACATCATCGCC TCGACAACCGCCAAGTACAGCGAACCGGCAAACATTTTGTCCATCCCATG CGACCTGGCGTTCGCATGCTCCCACCGGAACGAGATCGACGACACAGGAG CAACGCTGTTGGCTGATACGGGATGCTCAGCTGTGATCGAGGGTGCCTCA GCCCCGTGCACCAAGGCTGCCAAGGCGATTTTCCGCAAGCGCGGGCTTTC GTTCGCACCGCATGTGGCGACCCTTTGCGGAAGCGGGATCGTTAGCGGTC TGGCACTCGCCACCAACCCCCTGAGTGCTAAGGAAAACATCAACGACAGG GTTGAGGAAAAGATGAAGGCGATCTTCACTGATGTTAAGGCAACAGCTAC CGAGTTCAACGCTCGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11484:3789..6204+

>mRNA_L-elsbetiae_contig11484.1304.1 ID=mRNA_L-elsbetiae_contig11484.1304.1|Name=mRNA_L-elsbetiae_contig11484.1304.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig11484:3789..6204+ (Laminarionema elsbetiae ELsaHSoW15)
GGCTACCTCTATGGACAGTACAAACGCATCAACGACCACGTGGCTCAGCG
TGGAAGGGGCGTCCTCTGGGGGGGTGCCATGCCCTACCCCGAAGGCTACC
TCTATGGACAGTACAAACGCATCAACGACCACGTGGCTCAGCGTGGAAGG
GGCGTCCTCTGGGGGGGTGCCATGCCCTACCCCGAAGCGACTGGGTACGG
TGTTGTGGAGTTCGCGAAGTGTATGCTGGAAGATAAGGGGGACACCCTGA
AGGGAAAGCGGTGCCTTATTACGGGAAGCGGAAAGGCGACTGGGTACGGT
GTTGTGGAGTTCGCGAAGTGTATGCTGGAAGATAAGGGGGACACCCTGAA
GGGAAAGCGGTGCCTTATTACGGGAAGCGGAAAGGTGGCAGTTCACGTGG
CAGAGAAACTCTTGCAGCTAGGTGCCATTCCCTTGACTTTCTCCGACAGC
AGCGGTTTCATTTACGAACCAGAGGTGGCAGTTCACGTGGCAGAGAAACT
CTTGCAGCTAGGTGCCATTCCCTTGACTTTCTCCGACAGCAGCGGTTTCA
TTTACGAACCAGAGGGCATCGACTCGGCCAAGCTTCGCACAATCGTCAAG
ATCAAGTCCGAGAGAGGGCATCGACTCGGCCAAGCTTCGCACAATCGTCA
AGATCAAGTCCGAGAGAGGGGCGCGGGTGGGGCGGTACATCATCGCCTCG
ACAACCGCCAAGTACAGCGAACCGGCAAACATTTTGTCCATCCCATGCGA
CCTGGCGTTCGCATGCTCCCACCGGAACGAGATCGACGACACAGGAGCAA
CGCTGTTGGCTGATACGGGATGCTCAGCTGTGATCGAGGGTGCCTCAGCC
CCGTGCACCAAGGCTGCCAAGGCGATTTTCCGCAAGCGCGGGCTTTCGTT
CGCACCGCATGTGGCGACCCTTTGCGGAAGCGGGATCGTTAGCGGTCTGG
CACTCGCCACCAACCCCCTGAGTGCTAAGGAAAACATCAACGACAGGGTT
GAGGAAAAGATGAAGGCGATCTTCACTGATGTTAAGGCAACAGCTACCGA
GTTCAACGCTCGAGGGCGCGGGTGGGGCGGTACATCATCGCCTCGACAAC
CGCCAAGTACAGCGAACCGGCAAACATTTTGTCCATCCCATGCGACCTGG
CGTTCGCATGCTCCCACCGGAACGAGATCGACGACACAGGAGCAACGCTG
TTGGCTGATACGGGATGCTCAGCTGTGATCGAGGGTGCCTCAGCCCCGTG
CACCAAGGCTGCCAAGGCGATTTTCCGCAAGCGCGGGCTTTCGTTCGCAC
CGCATGTGGCGACCCTTTGCGGAAGCGGGATCGTTAGCGGTCTGGCACTC
GCCACCAACCCCCTGAGTGCTAAGGAAAACATCAACGACAGGGTTGAGGA
AAAGATGAAGGCGATCTTCACTGATGTTAAGGCAACAGCTACCGAGTTCA
ACGCTCGA
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