mRNA_L-elsbetiae_contig1148.1299.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1148.1299.1
Unique NamemRNA_L-elsbetiae_contig1148.1299.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A6H5KYU3_9PHAE (DSBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYU3_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 6.980e-117
Identity = 166/219 (75.80%), Postives = 194/219 (88.58%), Query Frame = 2
Query:   92 MAKFNIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSH----FDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVECTKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEALS 736
            MAKFNIKIFSDNVCPWCFVGKR+LE+A+KQ+ A+E S+     FDVRWKPFFLN+E+PETSE+ I EYLE+KYGKGAGSRMAASL  AG+A GI+FNN+RKVHNTIRSHRLVR AD Q +G +MI+QLFH YFE+G+NIADV VLL+LA KAGVECTK+YLEG EG++E++ EY+ GI  HGISGVPYF++SREG KATVPLSGGQPPAAF+EAFEALS
Sbjct:    1 MAKFNIKIFSDNVCPWCFVGKRNLETAMKQFAAREPSTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLAMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLEGKEGQEEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEALS 219          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: B7ZGN0_9PHAE (DSBA oxidoreductase n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN0_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 4.190e-111
Identity = 158/220 (71.82%), Postives = 188/220 (85.45%), Query Frame = 2
Query:   92 MAKFNIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSH------FDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVECTKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEAL 733
            M KFN+K+ SDNVCPWC+VGKR+LESA+KQ+   + +        FDVRWKPFFLNV+SPETSE  I EYLE+KYGKGAGSRMA +LE+AG++ GI FNN+R+VHNTIRSHRLVR+AD Q++G  MIEQLFHGYFEEGKNIAD  VLL++A KAGVECTKEYLEG EG+QE+L EY+KG++T G+SGVPY++ISREG KATVPLSG QPP AF+EAFEAL
Sbjct:    1 MPKFNVKVISDNVCPWCYVGKRNLESAMKQFATSQPTEKEQEPPVFDVRWKPFFLNVKSPETSEEPIQEYLEKKYGKGAGSRMAVALERAGKSTGINFNNDRRVHNTIRSHRLVRLADQQEKGGDMIEQLFHGYFEEGKNIADSDVLLEIAQKAGVECTKEYLEGKEGQQEVLNEYQKGVQTQGVSGVPYYIISREGSKATVPLSGAQPPEAFVEAFEAL 220          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A835YGU7_9STRA (Protein disulfide isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGU7_9STRA)

HSP 1 Score: 182 bits (463), Expect = 3.300e-52
Identity = 99/206 (48.06%), Postives = 129/206 (62.62%), Query Frame = 2
Query:  119 SDNVCPWCFVGKRHLESAIKQYTAKEASSHFDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVEC-TKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEAL 733
            S  VCPWCF+GKR LE+AI++             WKPFFL+  SP+ S + I  +L QKYG  AG+RMAASL  AG+ NGIKF  +R V NTI SHRLV +A  Q + D +IE LF GYFE+G  ++ V  L+ +A  AG+    + YLE  E +  ++ E     R  GI+GVP+FVI+R+G K  + LSG QP   F EAF+AL
Sbjct:   17 SPPVCPWCFIGKRRLEAAIRERGL--GPKDVQTTWKPFFLDANSPKDSGIPIGVHLRQKYGAQAGARMAASLAAAGEENGIKFKEDRTVQNTIMSHRLVHLAGKQGKQDAVIEALFSGYFEQGAKLSSVDTLVRIAETAGISGDVRAYLESGEDEDVVMREAFDSARRLGITGVPFFVIARDGNKERLTLSGAQPVDVFDEAFDAL 220          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: B3SBG0_TRIAD (DSBA domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3SBG0_TRIAD)

HSP 1 Score: 146 bits (369), Expect = 2.940e-38
Identity = 91/217 (41.94%), Postives = 131/217 (60.37%), Query Frame = 2
Query:  107 IKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSHFDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRM---AASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVEC--TKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREG---GKATVPLSGGQPPAAFIEAFEAL 733
            I I SD +CPWCFVGKRHLE+A+K +   E++  FD+ WKPF LN  +PE   + ++EYL Q+YG+          +SL  AG+  G+ F++ RK  N+IRSH L+  A  + + +Q+ E LF  YF +G NI DV VLLD A + G++    K+ L+  E +++I+ E +   +   I GVP+FVIS  G   GKA +PL G QP   F   F ++
Sbjct:   10 IDITSDTMCPWCFVGKRHLETAMKDF---ESTFEFDIEWKPFLLNSNTPEEG-IPVLEYLAQRYGQQVADDARNGTSSLIAAGRKVGLNFDSNRKFVNSIRSHCLLDYARTEKKQNQLAELLFQRYFIDGNNINDVKVLLDCAKEIGLKAEEAKKSLQDKERRKKIIEEAKVATQNQ-IHGVPHFVISLIGDQHGKA-MPLHGCQPIEMFRRVFTSI 220          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A6G1FUU3_9PEZI (DSBA oxidoreductase n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1FUU3_9PEZI)

HSP 1 Score: 139 bits (349), Expect = 2.100e-35
Identity = 80/218 (36.70%), Postives = 127/218 (58.26%), Query Frame = 2
Query:   92 MAKFNIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSH--FDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVECT--KEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEAL 733
            M +FNI++ SDNVCPWC++GK+ L+ AI+QYT+K   S   +++ WKPF+LN  +P+ S V   EY + K+G      + A+L + G + GI +    +  NT  SHRLV++   +  G ++IE+LF GYFE  ++I   G L      AG++    +++L   +G +E+  E ++     G+SGVP F +    G   +P  G Q P AF++ FE +
Sbjct:    1 MTQFNIQVVSDNVCPWCYMGKKRLDKAIQQYTSKYPDSQDTWNITWKPFYLNPHAPKAS-VDKAEYYQSKFGPERTRGIFANLSQLGLSEGIHYKFGGRTGNTRDSHRLVQLGRERGLGTRVIEELFKGYFENEQDITSHGFLQTAGEAAGLDAAEVRDWLGSDKGGKEVDREVQEAYE-EGVSGVPNFTV----GGYEIP--GAQEPVAFVKLFERI 210          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A6A6V021_9PLEO (DSBA oxidoreductase n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6V021_9PLEO)

HSP 1 Score: 138 bits (348), Expect = 4.190e-35
Identity = 86/220 (39.09%), Postives = 122/220 (55.45%), Query Frame = 2
Query:   92 MAKFNIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSH--FDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRG--DQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVEC--TKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEAL 733
            M  FNI I SDNVCPWC++GK+ LESAI  Y     SS+  F   W PF+LN ++P+TS V    Y   K+G      +   +   G+  GI F    K  NT  SHRLV++   +      ++IE LF  YFE+ ++I D  VL++L  KAG+E    +E++E  +G +E+  E ++     G+SGVP FVI+         + G Q PAAF++ FE L
Sbjct:    1 MTHFNISIVSDNVCPWCYIGKKRLESAITLYKKSHPSSNDTFSTSWHPFYLNPDAPKTS-VDKRSYYASKFGAERTEMIWERMINLGEQEGINFVLGGKTGNTRDSHRLVQLGKTKSAAMETRVIEVLFEAYFEKSQDITDKNVLVELGVKAGLEEKEVREWMESDKGGKEVDREVKEAYE-RGVSGVPNFVIN-----GRFEIGGAQEPAAFVQLFERL 213          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A0K2G672_NITMO (Putative thiol oxidoreductase, DsbA family, FrnE subfamily n=1 Tax=Nitrospira moscoviensis TaxID=42253 RepID=A0A0K2G672_NITMO)

HSP 1 Score: 138 bits (347), Expect = 4.230e-35
Identity = 89/215 (41.40%), Postives = 121/215 (56.28%), Query Frame = 2
Query:   95 AKFNIKIFSDNVCPWCFVGKRHLESAIKQY-TAKEASSHFDVRWKPFFLNVESPETSEVAIVEYLEQKYGK-GAGSRMAASLEKAGQANGIKF--NNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVECTKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFE 727
            ++  I+++SD VCPWC+VGKR LE A+ Q   A +A     + W+PF LN   P    +    YLE K+G   A  R+ A +  AG+A GI F   N R+  NT  +HRL+  A  Q R D ++E LF GYFEEG ++    VL  LA +AG+E    +L+G  G +E+  E  +G+R  GI GVPYFV+S   G     LSG QP   F+ A  
Sbjct:    4 SRLTIEVYSDVVCPWCYVGKRRLERALSQLGDAAQAR----IAWRPFELNPTLPREG-MDRRAYLEAKFGSLAAFQRLEAQVLAAGEAEGIAFAFENIRRTPNTFLAHRLIWYAATQHRQDAVVEALFRGYFEEGDDVGSPSVLTQLAERAGLEAAA-FLDGDGGTEEVRTEEAEGLRL-GIRGVPYFVLSGAYG-----LSGAQPVEVFLSAIR 206          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A3N4KYB6_9PEZI (Thioredoxin-like protein n=2 Tax=Morchella TaxID=5193 RepID=A0A3N4KYB6_9PEZI)

HSP 1 Score: 137 bits (345), Expect = 8.740e-35
Identity = 84/220 (38.18%), Postives = 119/220 (54.09%), Query Frame = 2
Query:   92 MAKFNIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSHFDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVEC--TKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEALS*SS 745
            M +F+I I SD VCPWC+VG R L  AI +++A      FD+ WKP++LN +SP+   +   E+   K+G      M   L   G+A GI F    K  NT  SHRL+++A  +    +M+E+LF  YFE  K+I     LLD A KAG+E    K +L GS+   +I+ +     + HGISGVP F I+         + G Q P  FI  F+ L+ +S
Sbjct:    1 MTRFSIDIVSDTVCPWCYVGYRKLNRAITEFSASNPGHTFDITWKPYYLNPDSPKVG-IDKTEFYYSKFGAERVVPMFQRLSAIGEAEGIHFKFGGKTGNTRDSHRLIQMAKEKGLQTRMVEELFAAYFENEKDITSFKTLLDAAKKAGLEEDEVKGWL-GSDAGGDIVDKEVHVAQRHGISGVPNFTIN-----GRYEIGGAQDPREFIAVFKGLADAS 213          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A015KS75_RHIIW (DSBA domain-containing protein n=8 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015KS75_RHIIW)

HSP 1 Score: 136 bits (343), Expect = 1.490e-34
Identity = 78/216 (36.11%), Postives = 128/216 (59.26%), Query Frame = 2
Query:  104 NIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSHFDVRWKPFFLN---VESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVECTK--EYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFEALS 736
            +I I SD +CPWC+VGKR LE AIKQ      +  F++ W P+ L+    + P++ +    E L +K+G+   +  AA L ++G+  GI F+++  V  T  +HRL+  A +Q + ++++E LFH Y EEGK+ AD  VL + A   G++  K  ++L+  EG Q++  E  + ++  GI+GVP+F I+ +       +SGGQ P  ++E FE +S
Sbjct:   10 HIDIVSDVICPWCYVGKRRLEEAIKQSKELYPNLSFEIEWFPYLLDPSLTKEPQSKK----EILMKKFGESTFNSNAAILIESGREIGISFDHDGVVAQTYDAHRLINYAKSQGKHEEIVEVLFHNYHEEGKSPADYDVLSEAAASVGLDKEKVLQFLKSEEGMQQVKDEISQALKK-GIAGVPHFTINNK-----FDVSGGQGPKIWLEIFENIS 215          
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Match: A0A261XU74_9FUNG (DSBA domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XU74_9FUNG)

HSP 1 Score: 136 bits (342), Expect = 1.970e-34
Identity = 83/214 (38.79%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   98 KFNIKIFSDNVCPWCFVGKRHLESAIKQYTAK--EASSHFDVRWKPFFLNVESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHNTIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGVECTKE--YLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSGGQPPAAFIEAFE 727
            +  I I SD +CPWCF+GKR LE AI    A   +A   F++ W+PF L+   P+        Y+E K+GK     M   +E  G+ +GI F+    V NT+ SHRL+  A ++ + D ++E+LFH YFE+ KNIAD  VL     KAG++  +   +L+  E   E  GE E+ +R + I GVP F I++        LSG Q P  F E FE
Sbjct:    4 QIQIDIVSDTICPWCFIGKRRLEKAIANTKAAHPDAQIEFNIDWQPFQLDPTLPKEGYNKREHYIE-KFGKARAQAMFPRMEAVGKDDGINFSYGGTVSNTLDSHRLIAFAKSKGKQDAVVEELFHNYFEQEKNIADEEVLKAAGVKAGLDAAEVEVFLKSGELAYETKGEIERNMRRN-IHGVPNFTINKR-----YQLSGAQEPETFQEIFE 210          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1148.1299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYU3_9PHAE6.980e-11775.80DSBA domain-containing protein n=2 Tax=Ectocarpus ... [more]
B7ZGN0_9PHAE4.190e-11171.82DSBA oxidoreductase n=1 Tax=Laminaria digitata Tax... [more]
A0A835YGU7_9STRA3.300e-5248.06Protein disulfide isomerase n=1 Tax=Tribonema minu... [more]
B3SBG0_TRIAD2.940e-3841.94DSBA domain-containing protein n=2 Tax=Trichoplax ... [more]
A0A6G1FUU3_9PEZI2.100e-3536.70DSBA oxidoreductase n=1 Tax=Eremomyces bilateralis... [more]
A0A6A6V021_9PLEO4.190e-3539.09DSBA oxidoreductase n=1 Tax=Sporormia fimetaria CB... [more]
A0A0K2G672_NITMO4.230e-3541.40Putative thiol oxidoreductase, DsbA family, FrnE s... [more]
A0A3N4KYB6_9PEZI8.740e-3538.18Thioredoxin-like protein n=2 Tax=Morchella TaxID=5... [more]
A0A015KS75_RHIIW1.490e-3436.11DSBA domain-containing protein n=8 Tax=Rhizophagus... [more]
A0A261XU74_9FUNG1.970e-3438.79DSBA domain-containing protein n=1 Tax=Bifiguratus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1148contigL-elsbetiae_contig1148:19137..21683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.6
Seed ortholog evalue2.1e-93
Seed eggNOG ortholog2880.D8LHI5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DSBA-like thioredoxin domain
EggNOG OGs2QTH7@2759,COG2761@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein disulfide isomerase
Ec32 orthologEc-11_003940.1
Exons4
Model size1185
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1148.1299.1prot_L-elsbetiae_contig1148.1299.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1148 19583..21592 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815354.2594247-UTR-L-elsbetiae_contig1148:19136..195821622815354.2594247-UTR-L-elsbetiae_contig1148:19136..19582Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1148 19137..19582 -
1691682856.9291127-UTR-L-elsbetiae_contig1148:19136..195821691682856.9291127-UTR-L-elsbetiae_contig1148:19136..19582Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1148 19137..19582 -
1622815354.3164108-UTR-L-elsbetiae_contig1148:21592..216831622815354.3164108-UTR-L-elsbetiae_contig1148:21592..21683Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1148 21593..21683 -
1691682856.9945807-UTR-L-elsbetiae_contig1148:21592..216831691682856.9945807-UTR-L-elsbetiae_contig1148:21592..21683Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1148 21593..21683 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815354.2692401-CDS-L-elsbetiae_contig1148:19582..197891622815354.2692401-CDS-L-elsbetiae_contig1148:19582..19789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 19583..19789 -
1691682856.9415894-CDS-L-elsbetiae_contig1148:19582..197891691682856.9415894-CDS-L-elsbetiae_contig1148:19582..19789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 19583..19789 -
1622815354.2791398-CDS-L-elsbetiae_contig1148:20441..206961622815354.2791398-CDS-L-elsbetiae_contig1148:20441..20696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 20442..20696 -
1691682856.951439-CDS-L-elsbetiae_contig1148:20441..206961691682856.951439-CDS-L-elsbetiae_contig1148:20441..20696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 20442..20696 -
1622815354.290833-CDS-L-elsbetiae_contig1148:21186..213511622815354.290833-CDS-L-elsbetiae_contig1148:21186..21351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 21187..21351 -
1691682856.9618073-CDS-L-elsbetiae_contig1148:21186..213511691682856.9618073-CDS-L-elsbetiae_contig1148:21186..21351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 21187..21351 -
1622815354.3057537-CDS-L-elsbetiae_contig1148:21571..215921622815354.3057537-CDS-L-elsbetiae_contig1148:21571..21592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 21572..21592 -
1691682856.9799788-CDS-L-elsbetiae_contig1148:21571..215921691682856.9799788-CDS-L-elsbetiae_contig1148:21571..21592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1148 21572..21592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1148.1299.1

>prot_L-elsbetiae_contig1148.1299.1 ID=prot_L-elsbetiae_contig1148.1299.1|Name=mRNA_L-elsbetiae_contig1148.1299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
MAKFNIKIFSDNVCPWCFVGKRHLESAIKQYTAKEASSHFDVRWKPFFLN
VESPETSEVAIVEYLEQKYGKGAGSRMAASLEKAGQANGIKFNNERKVHN
TIRSHRLVRVADAQDRGDQMIEQLFHGYFEEGKNIADVGVLLDLAGKAGV
ECTKEYLEGSEGKQEILGEYEKGIRTHGISGVPYFVISREGGKATVPLSG
GQPPAAFIEAFEALS*
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mRNA from alignment at L-elsbetiae_contig1148:19137..21683-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1148.1299.1 ID=mRNA_L-elsbetiae_contig1148.1299.1|Name=mRNA_L-elsbetiae_contig1148.1299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2547bp|location=Sequence derived from alignment at L-elsbetiae_contig1148:19137..21683- (Laminarionema elsbetiae ELsaHSoW15)
CGTGAACGCAACCTACCACTCTGCTTCGTGCTACCCGTATTTACAGCGTT GGAGACACACCGAGACTTAAAGCAACAGAGAGGCTTTCAGCATGGCGAAA TTCAACATCAAGGTGACCATTGTACCAGCAGTTGCACAGGATCACACCTT GCGAAACAACATCCGATTGTGAGGCATTGAGAGACACATTTGGCCTCACC GACAGCAAACTAGAGTTACGCTGGTGCCGGAGAAAAGACGAGCCCGTCCA TCATTTCTACCCTCACTATCAATGCTAAATTGGTGTTGAATTTCCTTCCC CAACACACCACAAAACGCGTGCTTTGTTGCAGATCTTCAGCGACAACGTT TGCCCGTGGTGCTTCGTCGGCAAGAGACATCTCGAAAGCGCCATCAAGCA GTACACTGCAAAGGAGGCTTCTTCCCACTTCGACGTTCGCTGGAAACCGT TCTTCCTCAACGTCGAATCGCCGGAGACATCAGAGGTGGCGATCGTGGTG AGTGCAGTGTGTGCACACATCGCTAGAAGCCTGTCGGCAGATGTTGCATC GGTTTACAGCGTAAATATGTATGTACATCGCAATACGCCGTGTGTACCAT GGGGCGTTTCGAGAGATATCACTGAATCGCAGCAGTCGCTAGCGGCAAGG AGGGGGGAAAGGGAGAGGGGGAGGGGAAGGCTTATGCAGTATTCTTGTGC TGGACTAGAAGAATACGGGAAATATTTGATCTAGATGTACATGCCCGCAT GGTGAGCGGATAGACCTGGCAGCCCGCTCTCTCCGCATCGATTAGCTTGC GGGTGTCCCAGCGCAAAGAACAGGGGGAGTAGGACAAAAACGTAGCCCGC AAGGTTGCAACCCTTCAAGGTATCAACATGTGCGGCTCTCACCGGCGGCC TGCTTCGGGAGCATTGGTTCTGTGTGCTTGCTCGCCCCGCGCGCACCCAA CCCAACCCCACCCCCACCCCGCACTTCATCTCTCCAGGAGTACTTGGAAC AGAAGTACGGCAAGGGTGCCGGCTCTCGAATGGCAGCGTCGCTGGAGAAA GCGGGACAGGCCAACGGCATCAAGTTCAACAACGAGCGAAAGGTACACAA CACCATCCGGTCCCACCGCCTGGTTCGCGTCGCGGACGCGCAGGACAGGG GAGACCAGATGATCGAGCAGCTGTTCCACGGGTACTTCGAAGAGGGGAAG AACATCGCGGACGTCGGCGTTCTTCTGGACCTGGCCGGAAAGGTACGGGC TTCACGCGGTGTTTCATGTCGATAACCAATCACGTAACCGATCACGTATA TATATTAAAAATAAACAAAGAATCAAAGATGGAACCTAACCCACACTAGA GCAAAGACTCGATATGGGGTTCAAACGGTATTCCATACAGAGACGTAATA TTTGGCGAAGCGAGCAGAAAAACAACCTATATTTATGTATACTCAGATAT GCATGCATGTAGCTTTGACCAGAGACAGACGTTCATGAATATTCTCGCTG TTTTTCCCTCAACATCTAGACTAGAAGGGTATTCGCGAATGAATGTGGGT ACTTTGTAGCACGGTTTCGGTTTCGCGGCCTCCCGGTGTGCGCTACCCCC CGCCCCCTCTTTTCGTCTCAACACGACAATTCTCGACCCGCATGCGTGTC ACGAAGACGTTCGCTCTCTCGCGCTCTCTCTCTCCCTTGCTTCCTCTCCT GCTCACTCTTGTATCAAACACGTACCAGACATACTGTAGTTTCCTCTCCA TCACCCCGTCTTCCTCATAAACATGCCTTTGTACTTCTAGACGGCGCGAT TCCCCACGCCATTTTACAATCGTTCACCTTTTTGACCCCCCCCCCCCCTT TTGGATCGCAAAACCCAATCGCCTCTTTCCTTTTCTACCCACAGGCCGGG GTCGAGTGCACGAAAGAATACCTCGAGGGTAGTGAGGGAAAGCAAGAAAT CCTCGGCGAATACGAAAAGGGTATCCGGACTCACGGCATCTCCGGAGTGC CGTACTTCGTCATTTCGCGCGAGGGTGGTAAGGCCACCGTCCCGCTCTCT GGCGGGCAGCCACCAGCGGCCTTCATCGAGGCGTTCGAGGCACTATCGTG AAGTAGCTACTATTGTCTCAACAGGTTTTGCCCCCCGGGCCTGTGTCTCG TGGCAAACGATCGGGACGAAAAGCAATCTCTCTCCTGATTCGTAAATCAA GCCGCTTTTGAGATTAGATGTATATAGCCCTCATCCCACGGAGAGTTGTT TCGGTCAGTAGGCGAATCCCTTCGGGTAAGGTCACACGGAAGTATGGAGG CTTTTGTCGAAACCGTTGGGGCCATGTTTTGGCTCTTCTCTGTGGGGTGG GACGCCAACGCGAGTTCCTTTGGAGTAGAGCTGCCACAGATCTCCATGGA CCAGGTTTTGTGGGATGGTGTCCTTGGCTCGCAACCATCGTTCGTCACGC TGGCACGAGCAATGGTAATGGTGATGTTTTGTGTACGATATTTTTTGTGG GTGGTGGTTGGCGATCTTTAGGAGCTCTGCCACGGGTAAAAATGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1148:19137..21683-

>mRNA_L-elsbetiae_contig1148.1299.1 ID=mRNA_L-elsbetiae_contig1148.1299.1|Name=mRNA_L-elsbetiae_contig1148.1299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1296bp|location=Sequence derived from alignment at L-elsbetiae_contig1148:19137..21683- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGAAATTCAACATCAAGATGGCGAAATTCAACATCAAGATCTTCAG
CGACAACGTTTGCCCGTGGTGCTTCGTCGGCAAGAGACATCTCGAAAGCG
CCATCAAGCAGTACACTGCAAAGGAGGCTTCTTCCCACTTCGACGTTCGC
TGGAAACCGTTCTTCCTCAACGTCGAATCGCCGGAGACATCAGAGGTGGC
GATCGTGATCTTCAGCGACAACGTTTGCCCGTGGTGCTTCGTCGGCAAGA
GACATCTCGAAAGCGCCATCAAGCAGTACACTGCAAAGGAGGCTTCTTCC
CACTTCGACGTTCGCTGGAAACCGTTCTTCCTCAACGTCGAATCGCCGGA
GACATCAGAGGTGGCGATCGTGGAGTACTTGGAACAGAAGTACGGCAAGG
GTGCCGGCTCTCGAATGGCAGCGTCGCTGGAGAAAGCGGGACAGGCCAAC
GGCATCAAGTTCAACAACGAGCGAAAGGTACACAACACCATCCGGTCCCA
CCGCCTGGTTCGCGTCGCGGACGCGCAGGACAGGGGAGACCAGATGATCG
AGCAGCTGTTCCACGGGTACTTCGAAGAGGGGAAGAACATCGCGGACGTC
GGCGTTCTTCTGGACCTGGCCGGAAAGGAGTACTTGGAACAGAAGTACGG
CAAGGGTGCCGGCTCTCGAATGGCAGCGTCGCTGGAGAAAGCGGGACAGG
CCAACGGCATCAAGTTCAACAACGAGCGAAAGGTACACAACACCATCCGG
TCCCACCGCCTGGTTCGCGTCGCGGACGCGCAGGACAGGGGAGACCAGAT
GATCGAGCAGCTGTTCCACGGGTACTTCGAAGAGGGGAAGAACATCGCGG
ACGTCGGCGTTCTTCTGGACCTGGCCGGAAAGGCCGGGGTCGAGTGCACG
AAAGAATACCTCGAGGGTAGTGAGGGAAAGCAAGAAATCCTCGGCGAATA
CGAAAAGGGTATCCGGACTCACGGCATCTCCGGAGTGCCGTACTTCGTCA
TTTCGCGCGAGGGTGGTAAGGCCACCGTCCCGCTCTCTGGCGGGCAGCCA
CCAGCGGCCTTCATCGAGGCGTTCGAGGCACTATCGTGAGCCGGGGTCGA
GTGCACGAAAGAATACCTCGAGGGTAGTGAGGGAAAGCAAGAAATCCTCG
GCGAATACGAAAAGGGTATCCGGACTCACGGCATCTCCGGAGTGCCGTAC
TTCGTCATTTCGCGCGAGGGTGGTAAGGCCACCGTCCCGCTCTCTGGCGG
GCAGCCACCAGCGGCCTTCATCGAGGCGTTCGAGGCACTATCGTGA
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