mRNA_L-elsbetiae_contig1141.1237.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI) HSP 1 Score: 372 bits (956), Expect = 4.700e-124 Identity = 182/213 (85.45%), Postives = 198/213 (92.96%), Query Frame = 1
Query: 1 KERDNIYYLPSGNGVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEEAWTRVAAGECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAMFG 639
+ER+NIY+LPSGNGVCVE CP TNYT+FICYDEVYPEI NNETGEVDI+EAWTRV+AG+CLYHMATTNILSYCVFD+VIDL +EAAT A+EAE ANALNGTNAN TVVSSDVSE+TWFE VFADMLTARGLIGGFGLGVSVLVGT YLLFLRIPGVLFLLIWGLLFGVWAILAG+G ML QT+E+W AEEEPRIH DG++NAAKYLSY MFG
Sbjct: 51 QERENIYFLPSGNGVCVEECPATTNYTQFICYDEVYPEIFNNETGEVDIQEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSVLVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFG 263
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK) HSP 1 Score: 159 bits (402), Expect = 8.480e-42 Identity = 88/219 (40.18%), Postives = 141/219 (64.38%), Query Frame = 1
Query: 4 ERDNIYYLPSGN-------GVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEEAWTRVAAGECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDV-SETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAMF 636
++ IYYLPS + GVCV++CP E + T+F+C + + + + +++ +AW V G+C+YH ATT+I +YCV+D + AA+AAI+ A+ALN + N T +S + S+++WF+ AD++TA+ +I GFG+GV+++VG +YL FLRIPGVLF+L WG++ + +L + + + TA SWA+E P+IH D + Y SYA+F
Sbjct: 92 DKSKIYYLPSVSTNSYGAIGVCVDSCPSERDLTQFVCNYTI--DSTFDSSDALEMAQAWRYVLQGQCMYHEATTDIFNYCVYDAALS----AASAAIDQVVASALNVSADNVTGLSYETDSDSSWFDNFTADLMTAKYVILGFGVGVAMVVGFIYLFFLRIPGVLFMLTWGIIGAITLVLLLAAVLCYTTATSWASES-PQIHSDTEAKGLLYFSYALF 303
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA) HSP 1 Score: 148 bits (374), Expect = 5.120e-38 Identity = 75/211 (35.55%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 10 DNIYYLPSGNGVCVENCPMETNYTKFICYDEVYPE--ILNNETGEVDIEEAWTRVAAGECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAMF 636
D Y +PSG GVCV +CP E NY +F C ++ E + N + E AW VA G+C+Y+ A+T++ +YCVFD I N A A+A G + V+ + +W + AD++ ++ L+ G LG S L+ +Y+ +R+P +LFLL+W G+ A+ G+G +L TA++W E EP+ H D + A Y SY +F
Sbjct: 94 DKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTA--------ASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLF 296
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.850e-35 Identity = 78/218 (35.78%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 1 KERDNIYYLPSGNGVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEEAWTRVAAGECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSET-------TWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAM 633
K +NIYYLPSG G+C+E+CP T+Y +F C PE D +A+ ++AAG+C+YH+ATT++ +YC++D V++ + A +E A A NGT + V + D+ E+ WF+ AD+ A +I GFG G +YL+ LR+PGVLFL+ WG++F V + GA+ Q ++W E+ H D + Y Y +
Sbjct: 66 KNEENIYYLPSGAGICIESCPTATDYKQFHCMPGEEPE---------DDLDAYKKIAAGKCMYHVATTDVFNYCIYDAVLEAAQDVGAATLEQAIAAANNGT--SDAVAAGDIPESYFEPDEDNWFDDFTADLYKAIYVIFGFGXXXXXXXGFLYLILLRVPGVLFLMTWGIIFLVQLLWLVGGALCVQIGKAW---EDDNKHSDMESKGLLYFGYVL 269
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK) HSP 1 Score: 138 bits (348), Expect = 3.230e-34 Identity = 79/218 (36.24%), Postives = 126/218 (57.80%), Query Frame = 1
Query: 1 KERDNIYYLPSGN------GVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEEAWTRVAAGECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAMF 636
K + IYYLP+ GVC+++CP + + FIC N + E+ E + V++G C+Y TT+I +YC++DT++D AA +E E ++ N ++AN ++ S D S+ WF+ AD+ T + +I GFG+GV++++G VYL LRIPGVLF+L WG++F + +L G + + TA WA + H + N+ KY SY +F
Sbjct: 143 KSKSKIYYLPAVGTTVSIAGVCIDSCPSTQDTSTFIC--------KYNVSDELTTLEYYQEVSSGNCMYQEPTTDIFNYCIYDTLLDAAESAAYQTLE-EVMSSFNMSSANVSLSSDDSSD--WFDDFTADIYTGKYVIFGFGIGVALVIGFVYLFLLRIPGVLFMLTWGIIFSILFLLLIGGVLCYTTASDWADDSS---HTTTEANSLKYFSYFLF 346
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A7S2LCM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCM1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 6.290e-18 Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 19 YYLPSGNGVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEEAWT-RVAAG-------ECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAIL 519
YYLPSG VC+++CP + NYTKF C D ++ E G++D E+ + G +C+ + + ++L YC +D+ E + A + +NGT ++ +F+ V AD+ T+R +I GFG G SVL+G +L+ LRIPG+L +++WG + + A L
Sbjct: 100 YYLPSGLPVCIDSCPDDDNYTKFHC-DYQTDALIQAELGDLDGEDRTVLETSLGLQYSLQYKCMPQVKSNSLLGYCYPKEGMDVITEVTSNAAVNDGQEPINGT------FVDPIAGGEFFDEVLADVKTSRDVILGFGFGFSVLLGFTFLILLRIPGMLHIVVWGFIAAILAAL 267
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A7S2D002_9STRA (Choline transporter-like protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D002_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.080e-17 Identity = 73/215 (33.95%), Postives = 104/215 (48.37%), Query Frame = 1
Query: 19 YYLPSGNGVCVENCPMETNYTKFIC-YD-EVYPEILNNETGEVDIEEAWTR----VAAGECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQI--NAAKYLSYAMFG 639
YYLPSG VCV+ CP E N+ +FIC YD + + L + +D A T +C+ + T + + YC+ D + AA+EA+ N T + +E W+E AD T+ G+I G GLGV+ LVG +YL LRIPGVL L++WG++ + A G ML+ E I +D I N Y A+ G
Sbjct: 113 YYLPSGMAVCVKECPSENNFDEFICEYDYQAKVDALMDSDSVIDNALAITYGLKYTNDYKCMPKVETYDYMGYCMPVAAQDAIELSMNAALEAKGFN---------TTQIQNAAEKGWWEMFQADFYTSYGVILGCGLGVTSLVGFIYLYILRIPGVLALVVWGIIAMIEAFFLLPGLMLYMVTYP----EYLEIGEDSSIAINGTDYALDAVTG 314
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A812RYG8_SYMMI (Choline transporter-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RYG8_SYMMI) HSP 1 Score: 76.3 bits (186), Expect = 1.440e-12 Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 331 SDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAMFG 639
SD + W G FAD+ RG I GFG+G+++ + YL FLRIPGVLF +IW +L ++ +LA ML+ ++ WA ++ + + + A + + + G
Sbjct: 35 SDGGDGNWSTGFFADLFQLRGYIFGFGIGIALFLSFFYLFFLRIPGVLFTMIWTVLIAIFLVLAVGSIMLYTLSQQWANNDDRKTSEVRTLQALSIIGFVLTG 137
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.010e-12 Identity = 61/224 (27.23%), Postives = 100/224 (44.64%), Query Frame = 1
Query: 16 IYYLP-SGNGVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEEAWTRVAA----------------GECLYHMATTNILSYCVFDTVIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSETTWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSYAMF 636
+YY+ G GVCV +CP T+ N +++ + A + A G C+Y + + ++L++C+F T+ A A VS + S+ ++ + AD+ TAR I GFG G S+++G VY L LR+PGV+ ++ WG + V A+ A G L+ + WAA+ + H D QI A+ A +
Sbjct: 78 MYYIRFDGTGVCVADCPAATDLNTLYTCTTPDAAFANGGADQLNCKGADAQQCADLTGVTDPATFSGGGDGACMYQIESVDVLNHCLF------TDPAIADAF-----------------VSLN-SQMSYMQQFLADIYTARNWILGFGFGFSLVMGFVYCLLLRVPGVVAIMTWGSILAVIALFAAVGYGLYTKGDEWAADTTNQ-HTDVQITIARIFGIAGY 276
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Match: A0A482STG6_9ARCH (CTL/SLC44 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STG6_9ARCH) HSP 1 Score: 67.8 bits (164), Expect = 1.170e-9 Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 1
Query: 178 ECLYHMATTNILSYCVFDT-VIDLTNEAATAAIEAEQANALNGTNANGTVVSSDVSET--TWFEGVFADMLTARGLIGGFGLGVSVLVGTVYLLFLRIPGVLFLLIWGLLFGVWAILAGSGAMLFQTAESWAAEEEPRIHDDGQINAAKYLSY 627
+C++ + + L+ C DT V+D EAA + A++L T + + +E +WF AD++ IGGFGLGV+ L+ YL LRIPG+LF+++W ++ G++ L +L+ A SW + +H +I + SY
Sbjct: 2 DCMFKVKSKTFLNRCYPDTNVVDAAEEAA------DVADSLGVTINLDLLTYNTAAEKGQSWFSQTLADIIILAPYIGGFGLGVATLLSFGYLYLLRIPGLLFIMLWSVVLGIFLCLLIGSWLLWSLANSWV---DDGLHSQPEITTMRVFSY 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1141.1237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1141.1237.1 >prot_L-elsbetiae_contig1141.1237.1 ID=prot_L-elsbetiae_contig1141.1237.1|Name=mRNA_L-elsbetiae_contig1141.1237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp KERDNIYYLPSGNGVCVENCPMETNYTKFICYDEVYPEILNNETGEVDIEback to top mRNA from alignment at L-elsbetiae_contig1141:2703..4630+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1141.1237.1 ID=mRNA_L-elsbetiae_contig1141.1237.1|Name=mRNA_L-elsbetiae_contig1141.1237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1928bp|location=Sequence derived from alignment at L-elsbetiae_contig1141:2703..4630+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1141:2703..4630+ >mRNA_L-elsbetiae_contig1141.1237.1 ID=mRNA_L-elsbetiae_contig1141.1237.1|Name=mRNA_L-elsbetiae_contig1141.1237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1296bp|location=Sequence derived from alignment at L-elsbetiae_contig1141:2703..4630+ (Laminarionema elsbetiae ELsaHSoW15)back to top |