mRNA_L-elsbetiae_contig11409.1235.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A6H5JZZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ8_9PHAE) HSP 1 Score: 108 bits (269), Expect = 3.000e-26 Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGRDQMTPR 162
ITL NLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGR+QMTPR
Sbjct: 457 ITLQNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGREQMTPR 510
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A836CG63_9STRA (Calcium-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG63_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 7.410e-10 Identity = 26/41 (63.41%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMM 123
IT+ NL+KIFG+EEHAREIMGDV+++ +G I Y+EF+ MM+
Sbjct: 444 ITVDNLIKIFGSEEHAREIMGDVDINSDGVIEYEEFRQMML 484
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: D8LI14_ECTSI (Calcium-dependent protein kinase, isoform 2 (CDPK 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI14_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 9.990e-10 Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMM 120
ITL NLV IFG+E+HAREI+GD++L G+G I++DEF+ MM
Sbjct: 333 ITLANLVSIFGSEDHAREIVGDIDLDGDGEISFDEFRQMM 372
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A6H5L236_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L236_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 1.010e-9 Identity = 26/40 (65.00%), Postives = 35/40 (87.50%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMM 120
ITL NLV IFG+E+HAREI+GD++L G+G I++DEF+ MM
Sbjct: 459 ITLANLVSIFGSEDHAREIVGDIDLDGDGEISFDEFRQMM 498
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A7S4D8Z4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Z4_HETAK) HSP 1 Score: 52.8 bits (125), Expect = 1.340e-6 Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 16 LVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGRDQMTP 159
LV IFG+ EHARE +G++++ G G+I YDEFK MM+ + L + P
Sbjct: 279 LVAIFGSLEHAREAVGEIDIDGNGSIEYDEFKEMMLQVNLASAEAPAP 326
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A418E6X0_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418E6X0_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 1.840e-6 Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGRDQMTPR 162
IT +LV+ G+E+HA+E+M +++ +G+GAI++DEF MM L D+ TPR
Sbjct: 12 ITKDDLVRFMGSEDHAQEVMDEIDTNGDGAISFDEFCAMMQHKNLG--DEGTPR 63
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A3L6V6M5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V6M5_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 3.980e-6 Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGRDQMTPR 162
IT +LV+ G+E+HA+E+M +++ +G+GAI++DEF MM L D+ TPR
Sbjct: 50 ITKDDLVRFMGSEDHAQEVMDEIDTNGDGAISFDEFCAMMQHKNLG--DEGTPR 101
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A7S1B6U7_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6U7_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 4.760e-6 Identity = 19/40 (47.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMM 120
IT +++++FG+E+ A+E+MGD++L G+G I+Y EF +MM
Sbjct: 586 ITRNDMIRVFGSEKQAQEVMGDIDLDGDGVISYKEFSSMM 625
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A7S3YAY0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY0_HETAK) HSP 1 Score: 49.7 bits (117), Expect = 9.940e-6 Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMD 126
IT +LV+IFG+EE A +I+GDV+ +G I+Y+EFK MM++
Sbjct: 96 ITREDLVRIFGSEEQAHQILGDVDRDQDGQISYEEFKRMMVE 137
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Match: A0A3R7XZJ6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7XZJ6_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 1.660e-5 Identity = 24/54 (44.44%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 1 ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGRDQMTPR 162
IT +LV+ G+E+HA+E+M +++ +G+GAI++DEF MM L D+ TPR
Sbjct: 466 ITKDDLVRFMGSEDHAQEVMDEIDTNGDGAISFDEFCAMMQHKNLG--DEGTPR 517 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11409.1235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11409.1235.1 >prot_L-elsbetiae_contig11409.1235.1 ID=prot_L-elsbetiae_contig11409.1235.1|Name=mRNA_L-elsbetiae_contig11409.1235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp ITLLNLVKIFGAEEHAREIMGDVNLSGEGAINYDEFKTMMMDMPLDGRDQback to top mRNA from alignment at L-elsbetiae_contig11409:5735..5896- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11409.1235.1 ID=mRNA_L-elsbetiae_contig11409.1235.1|Name=mRNA_L-elsbetiae_contig11409.1235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=162bp|location=Sequence derived from alignment at L-elsbetiae_contig11409:5735..5896- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11409:5735..5896- >mRNA_L-elsbetiae_contig11409.1235.1 ID=mRNA_L-elsbetiae_contig11409.1235.1|Name=mRNA_L-elsbetiae_contig11409.1235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=324bp|location=Sequence derived from alignment at L-elsbetiae_contig11409:5735..5896- (Laminarionema elsbetiae ELsaHSoW15)back to top |