mRNA_L-elsbetiae_contig11398.1221.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11398.1221.1
Unique NamemRNA_L-elsbetiae_contig11398.1221.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 3.440e-135
Identity = 198/236 (83.90%), Postives = 215/236 (91.10%), Query Frame = 1
Query:    1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFY---HISSC----RIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR--LLQSDPSQA 681
            +SFSMRLLETRKTATQREIYY FVKHFANQTKCNDAILDCC+LLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGG+SGLAITSDWLTRPLELKSDAR V+VVEKDGVFNR+VEDGFY   ++S+     RIPSVLVTGQGFPPLAVRACV+RLA+AL LPVLGLVDCNPFGLSVFLQYK+GSSRQG+GSAK+ VP M WVGLRPSQLDDL+LP++    L Q D S+A
Sbjct:    1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIVLVVEKDGVFNRMVEDGFYDRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEVHQTLSQQDLSRA 236          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 8.250e-131
Identity = 184/217 (84.79%), Postives = 200/217 (92.17%), Query Frame = 1
Query:    1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQA 651
            +SFSMRLLETRKTATQREIYY FVKHFANQTKCNDAILDCC+LLGEPRHCLGIVASSRGYLAGRIS+RGEGF+DWQDPRSTGG+SGLAITSDWLTRPLELKSDAR ++VVEKDGVFNR+VEDGF  I          TGQGFPPLAVRACV+RLA+AL LPVLGLVDCNPFGLSVFLQYK+GSS+QG+GSAK+RVP M WVGLRPSQLDDL+LPE+A
Sbjct:    1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISVRGEGFQDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGVFNRMVEDGFCDI----------TGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSKQGRGSAKFRVPEMKWVGLRPSQLDDLDLPEEA 207          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA)

HSP 1 Score: 228 bits (581), Expect = 7.370e-71
Identity = 127/248 (51.21%), Postives = 156/248 (62.90%), Query Frame = 1
Query:   19 LLETRKTATQREIYYAFVKHFAN-QTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEG-----------FEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQARLLQSDPSQATT*RIRAPDAVSARP 726
            LL   KTATQRE+YY     FA  Q +CN AIL   ALL EPRHCLG+VASSRG+  GR+  R                DW DPR+ GGT G ++ SDW++  LE +SDA++++VVEKDG F RL ED FY     R+P ++VTGQGFPP+AVRA V  L  AL+LP  GLVDC PFGLS+ L Y  G +R G+ +A Y    + W+GLRPSQLD L+LP QA   QSD  Q     +     V+ARP
Sbjct:    9 LLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGT-GASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYD----RLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTAD-VKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARP 250          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A6A3F4G6_9STRA (TP6A_N domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F4G6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.010e-49
Identity = 99/212 (46.70%), Postives = 139/212 (65.57%), Query Frame = 1
Query:   19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQA 651
            LL   KTATQR++YY     F  Q++ ++AILD  ++LG PR  + IV +++G   G ISI  +G   W   R  G    ++IT + L  +P +++S+A+Y+VVVEKDG+FNRL ED FY +    +PS+L+TG+GFP LA R  V  L+ AL +PVLGL DCNPFGLS+ L YK GS+R    S +Y V  + W+G+RPSQ+  L LP+ +
Sbjct:   96 LLTESKTATQRDVYYLH-PFFKGQSEADEAILDAGSILGVPRGFMNIVGATKGCFTGDISILRDG--SW---RHFGSGEEVSITQELLQLKPSDVQSNAKYIVVVEKDGIFNRLREDKFYEM----VPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAVD-IKWIGVRPSQVATLGLPQSS 296          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A1W0A8B8_9STRA (TP6A_N domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8B8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 8.870e-49
Identity = 103/219 (47.03%), Postives = 134/219 (61.19%), Query Frame = 1
Query:    1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR 654
            L  + +LL   KT TQRE+YY     F+NQ + ++ ILD   LL  PR CL IV + +GY  G I+ + E    W D R  G T G  IT D L  R  ++ SDA+Y++V+EKDG+FNRL ED F+H     IPS+LVTG+GFP LA R  V +L++   +PVL L DCNPFGLS+ L YK GS+R    S  Y V    W+GLRP +   L LP+ A+
Sbjct:   80 LQIAQQLLLQDKTITQRELYY-INPFFSNQQEADECILDVAGLLCVPRECLNIVGAVKGYFNGCITYQ-ERSGQWTDCRLDGPT-GRPITQDILRLRDDQITSDAQYIIVIEKDGIFNRLGEDQFFH----NIPSILVTGRGFPDLATRVFVKKLSERFQIPVLCLCDCNPFGLSILLSYKFGSARMPIDSICYAVDAK-WIGLRPLEAMLLELPDVAK 290          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A1V9YKA4_9STRA (TP6A_N domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKA4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.630e-48
Identity = 105/226 (46.46%), Postives = 134/226 (59.29%), Query Frame = 1
Query:    1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWL---TRPLEL-----KSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR 654
            L  + +LL   KT TQRE+YY     F  Q + ++ ILD   LL  PR CL IV   +GY  GRI  + E    W D    GGT G  I+ D L   +  +++      SDA+YV+VVEK+G+FNRL ED F++    R+P +LVTG+GFP LA R  V +L+ AL +PVLGL DCNPFGLS+FL YK GS+R    S  Y V  + WVGLRP     L LP+  R
Sbjct:   84 LQIAHQLLRENKTVTQRELYYLH-PFFTTQQEADECILDVSGLLRVPRECLNIVGGVKGYFTGRICYQ-ETNNHWIDCSQDGGT-GRPISRDILRLESHQMQIFGVFNLSDAKYVIVVEKEGIFNRLGEDLFFN----RVPCILVTGKGFPDLATRIFVKKLSDALRVPVLGLCDCNPFGLSIFLSYKFGSARMPLDSVAYAVD-IKWVGLRPLDAMALELPKVVR 301          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A196SEI9_BLAHN (Meiotic recombination protein SPO11 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SEI9_BLAHN)

HSP 1 Score: 173 bits (439), Expect = 2.190e-48
Identity = 93/212 (43.87%), Postives = 130/212 (61.32%), Query Frame = 1
Query:   19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR 654
            L++ RKT  QRE+YY     FA Q +C+D I DC ALL  PR  LGI A+ +GY++GR+       E+W D  S    S L+I    + + ++LKSDA+ ++VVEKDG+F RLVED F+      +P +L+TG+GFP  A R  +H L   LHLPV GL D NP+G+S+ + Y  GS   G  + +Y VP + W+GL    + DL+LP+  R
Sbjct:   96 LMKERKTVNQRELYYLNTDMFATQRECDDCIRDCIALLHVPRDVLGITATPKGYVSGRLLYSLGDAENWTDLSSV---SPLSIAYS-MVQHMQLKSDAKLILVVEKDGIFKRLVEDRFFDT----LPCILITGRGFPDFATRLLLHHLYTELHLPVFGLCDWNPYGMSLLMTYIVGSLASGLETYRYCVP-ITWIGLHYEDIIDLHLPDSIR 298          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A485L555_9STRA (Aste57867_16293 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L555_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.040e-47
Identity = 98/209 (46.89%), Postives = 125/209 (59.81%), Query Frame = 1
Query:   19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLP 642
            LL+  KT TQRE+YY     F  Q   ++ ILD    LG PR CL IV   +G   GRISI   G   W D    G T G  IT + L  +P ++ SDA +++V+EKDG+FNRL ED F+    C    +LVTG+GFP LA R  V +L+  L +PVLGL DCNPFGLS+ L YK GS+R    +  Y V  + W+GLRPS +  L+LP
Sbjct:   49 LLKEDKTITQRELYYLHT-FFETQKDADECILDVGGFLGVPRECLNIVGGVKGCFTGRISIAENGL--WIDCAKDGPT-GRPITRETLRLQPEQITSDANFILVIEKDGIFNRLSEDCFFDTMPC----ILVTGKGFPDLATRCFVRKLSDCLGIPVLGLCDCNPFGLSILLTYKLGSARMPLDAMHYTVD-IRWIGLRPSHVPQLDLP 248          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A329SU04_9STRA (TP6A_N domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SU04_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.130e-46
Identity = 96/209 (45.93%), Postives = 137/209 (65.55%), Query Frame = 1
Query:   19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLP 642
            LL   KTATQR++YY     F  Q++ ++AILD  ++LG PR  + IVA+++G   G +SI  +G   W   R  G    ++IT + L  +P +++S+A+ ++V+EKDG+FNRL ED F+ +    +PS+L+TG+GFP LA R  V  L+ AL +PVLGL DCNPFGLS+ L YK GS+R    S +Y V  + WVG+RPSQ+  L LP
Sbjct:  119 LLTENKTATQRDVYYLH-PFFKAQSEADEAILDAGSILGIPRGSMNIVAATKGCFTGDVSILRDG--KW---RHFGSGEEVSITHELLQLKPYDMRSNAQCILVIEKDGIFNRLREDKFFEM----VPSILITGRGFPDLATRIFVSLLSNALGIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVD-IKWVGVRPSQVAGLGLP 316          
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A0P1AB95_PLAHL (Type ii dna topoisomerase vi subunit a 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB95_PLAHL)

HSP 1 Score: 168 bits (425), Expect = 1.950e-46
Identity = 94/209 (44.98%), Postives = 137/209 (65.55%), Query Frame = 1
Query:   19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLP 642
            LL   KTATQR++YY     F  Q++ ++AILD  ++LG  R  + I+A+++G   G ISI  +G  +W   R  G     +IT + L  +  EL+S+A+ ++V+EKDG+FNRL ED F+ +    +PS+LVTG+GFP LA R  V  L++AL +PVLG+ DCNPFGLS+ L YK GS+R    S +Y V  + W+G+RPSQ+ ++ LP
Sbjct:   84 LLAENKTATQRDVYYLH-PFFKGQSEADEAILDAGSILGVSRGSMNIIAATKGCFTGDISILRDG--EW---RYFGNGEETSITHELLQLKQSELRSNAKIILVIEKDGIFNRLREDKFFDV----VPSILVTGKGFPDLATRVFVSLLSKALRIPVLGVCDCNPFGLSIILTYKLGSARMPLESLQYAVD-IKWIGVRPSQISNIALP 281          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G356_ECTSI3.440e-13583.90Sporulation-specific protein 11 homologue n=1 Tax=... [more]
A0A6H5KRW2_9PHAE8.250e-13184.79TP6A_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A836CJS5_9STRA7.370e-7151.21Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribo... [more]
A0A6A3F4G6_9STRA1.010e-4946.70TP6A_N domain-containing protein n=2 Tax=Phytophth... [more]
A0A1W0A8B8_9STRA8.870e-4947.03TP6A_N domain-containing protein n=1 Tax=Thraustot... [more]
A0A1V9YKA4_9STRA1.630e-4846.46TP6A_N domain-containing protein n=1 Tax=Achlya hy... [more]
A0A196SEI9_BLAHN2.190e-4843.87Meiotic recombination protein SPO11 n=1 Tax=Blasto... [more]
A0A485L555_9STRA1.040e-4746.89Aste57867_16293 protein n=1 Tax=Aphanomyces stella... [more]
A0A329SU04_9STRA1.130e-4645.93TP6A_N domain-containing protein n=1 Tax=Phytophth... [more]
A0A0P1AB95_PLAHL1.950e-4644.98Type ii dna topoisomerase vi subunit a 2 n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11398contigL-elsbetiae_contig11398:43..3877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score388.3
Seed ortholog evalue2.5e-105
Seed eggNOG ortholog2880.D7G356
KEGG koko:K10878
KEGG Pathwayko04113,map04113
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA topoisomerase VI subunit A
EggNOG OGsCOG1697@1,KOG2795@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Ec32 ortholog descriptionSporulation-specific protein 11 homologue
Ec32 orthologEc-03_004560.1
Exons6
Model size829
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11398.1221.1prot_L-elsbetiae_contig11398.1221.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11398 494..3865 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815347.4969368-UTR-L-elsbetiae_contig11398:42..1741622815347.4969368-UTR-L-elsbetiae_contig11398:42..174Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11398 43..174 -
1691682852.842224-UTR-L-elsbetiae_contig11398:42..1741691682852.842224-UTR-L-elsbetiae_contig11398:42..174Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11398 43..174 -
1622815347.508096-UTR-L-elsbetiae_contig11398:486..4931622815347.508096-UTR-L-elsbetiae_contig11398:486..493Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11398 487..493 -
1691682852.8665113-UTR-L-elsbetiae_contig11398:486..4931691682852.8665113-UTR-L-elsbetiae_contig11398:486..493Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11398 487..493 -
1622815347.5685952-UTR-L-elsbetiae_contig11398:3865..38771622815347.5685952-UTR-L-elsbetiae_contig11398:3865..3877Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11398 3866..3877 -
1691682852.9432566-UTR-L-elsbetiae_contig11398:3865..38771691682852.9432566-UTR-L-elsbetiae_contig11398:3865..3877Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11398 3866..3877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815347.5180273-CDS-L-elsbetiae_contig11398:493..6691622815347.5180273-CDS-L-elsbetiae_contig11398:493..669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 494..669 -
1691682852.8814502-CDS-L-elsbetiae_contig11398:493..6691691682852.8814502-CDS-L-elsbetiae_contig11398:493..669Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 494..669 -
1622815347.5264676-CDS-L-elsbetiae_contig11398:1433..15791622815347.5264676-CDS-L-elsbetiae_contig11398:1433..1579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 1434..1579 -
1691682852.896894-CDS-L-elsbetiae_contig11398:1433..15791691682852.896894-CDS-L-elsbetiae_contig11398:1433..1579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 1434..1579 -
1622815347.534631-CDS-L-elsbetiae_contig11398:2000..21581622815347.534631-CDS-L-elsbetiae_contig11398:2000..2158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 2001..2158 -
1691682852.9105074-CDS-L-elsbetiae_contig11398:2000..21581691682852.9105074-CDS-L-elsbetiae_contig11398:2000..2158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 2001..2158 -
1622815347.5466378-CDS-L-elsbetiae_contig11398:2396..25161622815347.5466378-CDS-L-elsbetiae_contig11398:2396..2516Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 2397..2516 -
1691682852.9246945-CDS-L-elsbetiae_contig11398:2396..25161691682852.9246945-CDS-L-elsbetiae_contig11398:2396..2516Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 2397..2516 -
1622815347.5589914-CDS-L-elsbetiae_contig11398:3787..38651622815347.5589914-CDS-L-elsbetiae_contig11398:3787..3865Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 3788..3865 -
1691682852.934633-CDS-L-elsbetiae_contig11398:3787..38651691682852.934633-CDS-L-elsbetiae_contig11398:3787..3865Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11398 3788..3865 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11398.1221.1

>prot_L-elsbetiae_contig11398.1221.1 ID=prot_L-elsbetiae_contig11398.1221.1|Name=mRNA_L-elsbetiae_contig11398.1221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIV
ASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDA
RYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRL
AQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLR
PSQLDDLNLPEQARLLQSDPSQATT*
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mRNA from alignment at L-elsbetiae_contig11398:43..3877-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11398.1221.1 ID=mRNA_L-elsbetiae_contig11398.1221.1|Name=mRNA_L-elsbetiae_contig11398.1221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3835bp|location=Sequence derived from alignment at L-elsbetiae_contig11398:43..3877- (Laminarionema elsbetiae ELsaHSoW15)
CTGAGCTTCTCCATGAGGCTGTTGGAAACCCGCAAGACCGCCACCCAACG AGAGATCTACTACGCCTTCGTCAAGCACTTCGCAAACCAGGTGATCTAAG CACGCGTACACACTCCGAAGTTTACACATGGGTACGATGAGCTACTACAC GCCCCTTTATTCTCGAGGGAGTCTGAATCGTTGACTTTTAGAAGCCAAAA CCAAACCATTATCTAGACTAGTCAGCGCTGACTAGTCTAATGGTTTGGTT TCGGCTTTATAAAAGCTAGTCGAGGGGGTTCAAATGGCCCGACACACAAC CACTTCCGAGGAGGTTAACTTCCCTAGTCAGCGCTGATTGGTCTGATGGC TTGATTTCGACTTCTATAAATGGAAGTCGAGAGTTCGAATCCCAGTCTGA GCACTTTTTCTCCTGAGTTCGGCGTGGGTTCGAATCCCAGACGGAGCATT TTTTCTCCTGAGACCCTGGATACTCTTGGCCAGAGTATGGGTGATGAGTA AGGCCCTGAGGCCCTGGCTACTCGTTAAGTATGAGCGAGTGACATCCGGC TGAATGAAACCAAGTAAACATTAGATCGACAGTAGCGCTGGCAAGGGGAG TAACCCTCCTCGGAACTGAAAGTGGTTCAGGTCATTTGAACCCCCCACAA CTGACTTTTTTAGAAGCGGAAATCAAACCATTAGACAAGATAGATGAGCT GTAGCACTGGCAAGGGGAGTCACCCTCCTCGGTGAAGTGAAAGTGTGTCG GGTATTTTGAACTCCCACAACTAAATGTTTTAGAAGCCGAATTCAAACCA TAAGACTAGTCAGCGCTGACTAGTCTATCTAATGGTTAGATTTCGGTTTT ATAGACTGAACGGTTTTCGTGCAAAGGTGCAGTGGTCAAAACCGCACAAC AGCAAACTGTTGGACATGGGGCGACCTCGGGGCTGCTGGTGGGTCTGTTC GGAATCATCATGTTCATGGCCGCGTTGGCGTACTTGCGATATAAAGTGTT CGCGATCGCATCGTTCAACACGTGGAACATGATTCGTCGTTAATCACGAC TTTGGAGGGCATATCGAAGAAGATACATAGTCTCGGCCATTGCTTCCTGG CGAAACGGCCCCGATATTGGGGGCAAGCGTTTTTCGCGCCTTCAACATTC CCTCCAAAGTCGATACGGTCGCCGAATCAAACCCTCCGAAGCATTCATTT CGTTCACGGCATGCATATCTATCCCGATTCCACGGGGTGTGATATGTTCC CGGGACACAAAGGCAGCCTAGTCTACAAAGTGTAAAAGGTTTCTTGTGAA CAAGCACAGAACGTGCCTCCGATTTGTCCTCGGCGTGCTCTCTTCTGTTT TTGTGGCGCAGACGAAGTGCAACGACGCAATCTTGGACTGCTGCGCCCTG CTCGGGGAACCCCGCCACTGCTTGGGCATCGTCGCCAGCTCCAGGGGGTA CCTGGCAGGCCGAATATCCATTCGGGGCGAGGTGACCATGCGCGTGTCAA ATGTTTCCCAAACGTCCAAGCAGCTTAACATCTATCATCGGGACGGCTGG TAAAGGTGGATATTTTGTGACGTAATCCAATATATTTGCACCCGCGGCTC AGTATACCCGTTAGAGGGTAAACTGCAACACACCCGAAACTGTAGATGCT CTGATGCTTTTCGCCTTCTCAACACGCCCGCTATATTCGCAAAACAAATT GGCGTTATTTCGCTCGCAGGGGTTCGAGGACTGGCAAGACCCGAGATCGA CGGGAGGGACATCGGGACTGGCCATCACCTCCGATTGGCTCACCCGTCCG CTCGAGCTCAAGTCTGACGCACGCTACGTGGTTGTCGTCGAGAAGGATGG GGTGTTCAACCGCCTGGTGGAAGACGGGTTCTACGACAGGCAAGAACTCA ACAACTGAAAAGGTTATGTCACCAGCTAGGGCCTTGACTTCGAAATAAAA AGACCAGTATGTATAATTCCTGATGCCAAGCACGAGGATATCTAACAAGA GAGAGAGGAGCGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG CGAGAGAGAGAGAGAGCGAGAGAGAGACCCAAATATGAACATACATATAC ATACGGGTTTCGTCCCCCCCTGGTGGCTCTATGGAAAGCTTCGCAACCAG CCACAGCGAACTCCGAGCATTTTGCAATCCTCACGAAGTGACAAGGGCGT ATAGTTATCACAAACAACTCTTCCAGTGGCGGTGGAAGCTCTATCAATAC GAGTCATCACGTTTGTCCTTCGGTGAAGCACCCGCATTTGTTAAGTAGCT TTTACCATATTTCATCCTGCAGGATCCCGAGCGTGCTGGTGACGGGGCAA GGATTCCCGCCCCTGGCGGTGCGTGCATGCGTCCACCGACTAGCCCAGGC GCTCCATCTTCCGGTTCTTGGGCTGGTTGACTGCAACCCCTTTGGTGAGA ATGCTGTCGTCCTCGAAAAAATGCAACCGCCTAGATACATATATACGGTG GTAACATGTGTAGTGTCGATGCCCCTTGCCGTAGAGGAAGACCATCCGAC GCCTCCTACCTTCGAACCGGCCTGTGTCGGAGAAACGCTGTTGCTGATTG TTTTACACTCCAAATTTTGGTTTCGAACAGCTGCAGCACGTCCTGTACCA TGGGGCAGTATGGACGCAGGTGGCGAAAACATCCGCCAAAAAAGCAGTCA GCCAAGACGTTCACCCGGGCCCACAGGCAGGCGCCCTGACCACAGTACCA GATGAATGAGCACCCACTACCATTGGCTCCACAAACGGATCAAACGACGT GCGTATCTACACGCAGTGTACAAACACCCTTGGGGGGTCAACACGCCTCT TTCTAGACAACTTACTGTAGAGATAGATACGTATGTATCACCACACATTT CCATCGGTGACACCCCTACCGTAGGTAGCATGGCCACGCCCGGCGAACAC GACAGGCGCGGGGTCGGCGAGAAGCGTCGTCGCTCGAGTATTTCGAGATC TTACACATCGTTTGCATGATACTCCACAAGAAACAAATTGGTATCGCGTT CTCAAGCGCGTTGGCCCCGTATGCGCCGTACCCCCTGACGACGTATTCTC ATCTCCCAGCGCACCGATGCCAGAATGCATGGTAGCTTCGCGCACAGTTG ACATCATCGAGTGTGCGTCGCTCCATTTGAAACCTGTACGCGCGTGCCCG CTACATAGGGCTGAGCGTTTTCCTTCAGTACAAGCAAGGCTCCTCGCGAC AAGGGAAGGGATCTGCCAAGTACAGGGTTCCCGGAATGGCTTGGGTGGGG CTGCGCCCTTCTCAGCTGGACGACCTCAACCTTCCCGAACAGGCGAGGCT CCTCCAAAGCGACCCCTCTCAAGCGACAACCTGAAGGATCCGTTGTATAC GTATACAGGCCCGCAGAAGAGAGCGTCGGCTGTTGCACGACATGTCACGC TTGTGTGGTGGCATCATCATCCTCTCTCCTTGCTGCTGTTACGATAGAGC ATACTCATCTCGCGCATGTCACAAATTGCTTACCATACGAGGGTCCTCTT GGGGTGAGTGAGTATCCCAGCTGAAATTAATTAGCTTCCCACCTCTGGTA AACAGTGCGAGATTTGTTCTATCCCCGGCCCCAAGGCGTGAGTCGTGCGC GTGTGTTCGCCTTCTCGGTGAATTATTGGGTGATTGCCACCGTCGGCCTG TAGGTGCACCAGACGCTGTCTCAGCAAGACCTCGCCAGGGCGCAATCGGC TTCAAAATCTTCCATTGTTATGGAGAACCCCGAGACCTACGGGGAGGAAG TCGCCTACTGGCTCGACACGGACCACGCAGGCAAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11398:43..3877-

>mRNA_L-elsbetiae_contig11398.1221.1 ID=mRNA_L-elsbetiae_contig11398.1221.1|Name=mRNA_L-elsbetiae_contig11398.1221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig11398:43..3877- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGCTGTTGGAAACCCGCAAGACCGCCACCCAACGAGAGATCTACTA
CGCCTTCGTCAAGCACTTCGCAAACCAGATGAGGCTGTTGGAAACCCGCA
AGACCGCCACCCAACGAGAGATCTACTACGCCTTCGTCAAGCACTTCGCA
AACCAGACGAAGTGCAACGACGCAATCTTGGACTGCTGCGCCCTGCTCGG
GGAACCCCGCCACTGCTTGGGCATCGTCGCCAGCTCCAGGGGGTACCTGG
CAGGCCGAATATCCATTCGGGGCGAGACGAAGTGCAACGACGCAATCTTG
GACTGCTGCGCCCTGCTCGGGGAACCCCGCCACTGCTTGGGCATCGTCGC
CAGCTCCAGGGGGTACCTGGCAGGCCGAATATCCATTCGGGGCGAGGGGT
TCGAGGACTGGCAAGACCCGAGATCGACGGGAGGGACATCGGGACTGGCC
ATCACCTCCGATTGGCTCACCCGTCCGCTCGAGCTCAAGTCTGACGCACG
CTACGTGGTTGTCGTCGAGAAGGATGGGGTGTTCAACCGCCTGGTGGAAG
ACGGGGGTTCGAGGACTGGCAAGACCCGAGATCGACGGGAGGGACATCGG
GACTGGCCATCACCTCCGATTGGCTCACCCGTCCGCTCGAGCTCAAGTCT
GACGCACGCTACGTGGTTGTCGTCGAGAAGGATGGGGTGTTCAACCGCCT
GGTGGAAGACGGCTTTTACCATATTTCATCCTGCAGGATCCCGAGCGTGC
TGGTGACGGGGCAAGGATTCCCGCCCCTGGCGGTGCGTGCATGCGTCCAC
CGACTAGCCCAGGCGCTCCATCTTCCGGTTCTTGGGCTGGTTGACTGCAA
CCCCTTTGCTTTTACCATATTTCATCCTGCAGGATCCCGAGCGTGCTGGT
GACGGGGCAAGGATTCCCGCCCCTGGCGGTGCGTGCATGCGTCCACCGAC
TAGCCCAGGCGCTCCATCTTCCGGTTCTTGGGCTGGTTGACTGCAACCCC
TTTGGGCTGAGCGTTTTCCTTCAGTACAAGCAAGGCTCCTCGCGACAAGG
GAAGGGATCTGCCAAGTACAGGGTTCCCGGAATGGCTTGGGTGGGGCTGC
GCCCTTCTCAGCTGGACGACCTCAACCTTCCCGAACAGGCGAGGCTCCTC
CAAAGCGACCCCTCTCAAGCGACAACCTGAGGCTGAGCGTTTTCCTTCAG
TACAAGCAAGGCTCCTCGCGACAAGGGAAGGGATCTGCCAAGTACAGGGT
TCCCGGAATGGCTTGGGTGGGGCTGCGCCCTTCTCAGCTGGACGACCTCA
ACCTTCCCGAACAGGCGAGGCTCCTCCAAAGCGACCCCTCTCAAGCGACA
ACCTGA
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