mRNA_L-elsbetiae_contig11398.1221.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 3.440e-135 Identity = 198/236 (83.90%), Postives = 215/236 (91.10%), Query Frame = 1
Query: 1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFY---HISSC----RIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR--LLQSDPSQA 681
+SFSMRLLETRKTATQREIYY FVKHFANQTKCNDAILDCC+LLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGG+SGLAITSDWLTRPLELKSDAR V+VVEKDGVFNR+VEDGFY ++S+ RIPSVLVTGQGFPPLAVRACV+RLA+AL LPVLGLVDCNPFGLSVFLQYK+GSSRQG+GSAK+ VP M WVGLRPSQLDDL+LP++ L Q D S+A
Sbjct: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIVLVVEKDGVFNRMVEDGFYDRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEVHQTLSQQDLSRA 236
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE) HSP 1 Score: 380 bits (975), Expect = 8.250e-131 Identity = 184/217 (84.79%), Postives = 200/217 (92.17%), Query Frame = 1
Query: 1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQA 651
+SFSMRLLETRKTATQREIYY FVKHFANQTKCNDAILDCC+LLGEPRHCLGIVASSRGYLAGRIS+RGEGF+DWQDPRSTGG+SGLAITSDWLTRPLELKSDAR ++VVEKDGVFNR+VEDGF I TGQGFPPLAVRACV+RLA+AL LPVLGLVDCNPFGLSVFLQYK+GSS+QG+GSAK+RVP M WVGLRPSQLDDL+LPE+A
Sbjct: 1 MSFSMRLLETRKTATQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISVRGEGFQDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGVFNRMVEDGFCDI----------TGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSKQGRGSAKFRVPEMKWVGLRPSQLDDLDLPEEA 207
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA) HSP 1 Score: 228 bits (581), Expect = 7.370e-71 Identity = 127/248 (51.21%), Postives = 156/248 (62.90%), Query Frame = 1
Query: 19 LLETRKTATQREIYYAFVKHFAN-QTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEG-----------FEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQARLLQSDPSQATT*RIRAPDAVSARP 726
LL KTATQRE+YY FA Q +CN AIL ALL EPRHCLG+VASSRG+ GR+ R DW DPR+ GGT G ++ SDW++ LE +SDA++++VVEKDG F RL ED FY R+P ++VTGQGFPP+AVRA V L AL+LP GLVDC PFGLS+ L Y G +R G+ +A Y + W+GLRPSQLD L+LP QA QSD Q + V+ARP
Sbjct: 9 LLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGT-GASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYD----RLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTAD-VKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARP 250
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A6A3F4G6_9STRA (TP6A_N domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F4G6_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.010e-49 Identity = 99/212 (46.70%), Postives = 139/212 (65.57%), Query Frame = 1
Query: 19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQA 651
LL KTATQR++YY F Q++ ++AILD ++LG PR + IV +++G G ISI +G W R G ++IT + L +P +++S+A+Y+VVVEKDG+FNRL ED FY + +PS+L+TG+GFP LA R V L+ AL +PVLGL DCNPFGLS+ L YK GS+R S +Y V + W+G+RPSQ+ L LP+ +
Sbjct: 96 LLTESKTATQRDVYYLH-PFFKGQSEADEAILDAGSILGVPRGFMNIVGATKGCFTGDISILRDG--SW---RHFGSGEEVSITQELLQLKPSDVQSNAKYIVVVEKDGIFNRLREDKFYEM----VPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAVD-IKWIGVRPSQVATLGLPQSS 296
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A1W0A8B8_9STRA (TP6A_N domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8B8_9STRA) HSP 1 Score: 174 bits (441), Expect = 8.870e-49 Identity = 103/219 (47.03%), Postives = 134/219 (61.19%), Query Frame = 1
Query: 1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR 654
L + +LL KT TQRE+YY F+NQ + ++ ILD LL PR CL IV + +GY G I+ + E W D R G T G IT D L R ++ SDA+Y++V+EKDG+FNRL ED F+H IPS+LVTG+GFP LA R V +L++ +PVL L DCNPFGLS+ L YK GS+R S Y V W+GLRP + L LP+ A+
Sbjct: 80 LQIAQQLLLQDKTITQRELYY-INPFFSNQQEADECILDVAGLLCVPRECLNIVGAVKGYFNGCITYQ-ERSGQWTDCRLDGPT-GRPITQDILRLRDDQITSDAQYIIVIEKDGIFNRLGEDQFFH----NIPSILVTGRGFPDLATRVFVKKLSERFQIPVLCLCDCNPFGLSILLSYKFGSARMPIDSICYAVDAK-WIGLRPLEAMLLELPDVAK 290
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A1V9YKA4_9STRA (TP6A_N domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKA4_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.630e-48 Identity = 105/226 (46.46%), Postives = 134/226 (59.29%), Query Frame = 1
Query: 1 LSFSMRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWL---TRPLEL-----KSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR 654
L + +LL KT TQRE+YY F Q + ++ ILD LL PR CL IV +GY GRI + E W D GGT G I+ D L + +++ SDA+YV+VVEK+G+FNRL ED F++ R+P +LVTG+GFP LA R V +L+ AL +PVLGL DCNPFGLS+FL YK GS+R S Y V + WVGLRP L LP+ R
Sbjct: 84 LQIAHQLLRENKTVTQRELYYLH-PFFTTQQEADECILDVSGLLRVPRECLNIVGGVKGYFTGRICYQ-ETNNHWIDCSQDGGT-GRPISRDILRLESHQMQIFGVFNLSDAKYVIVVEKEGIFNRLGEDLFFN----RVPCILVTGKGFPDLATRIFVKKLSDALRVPVLGLCDCNPFGLSIFLSYKFGSARMPLDSVAYAVD-IKWVGLRPLDAMALELPKVVR 301
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A196SEI9_BLAHN (Meiotic recombination protein SPO11 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SEI9_BLAHN) HSP 1 Score: 173 bits (439), Expect = 2.190e-48 Identity = 93/212 (43.87%), Postives = 130/212 (61.32%), Query Frame = 1
Query: 19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLTRPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLPEQAR 654
L++ RKT QRE+YY FA Q +C+D I DC ALL PR LGI A+ +GY++GR+ E+W D S S L+I + + ++LKSDA+ ++VVEKDG+F RLVED F+ +P +L+TG+GFP A R +H L LHLPV GL D NP+G+S+ + Y GS G + +Y VP + W+GL + DL+LP+ R
Sbjct: 96 LMKERKTVNQRELYYLNTDMFATQRECDDCIRDCIALLHVPRDVLGITATPKGYVSGRLLYSLGDAENWTDLSSV---SPLSIAYS-MVQHMQLKSDAKLILVVEKDGIFKRLVEDRFFDT----LPCILITGRGFPDFATRLLLHHLYTELHLPVFGLCDWNPYGMSLLMTYIVGSLASGLETYRYCVP-ITWIGLHYEDIIDLHLPDSIR 298
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A485L555_9STRA (Aste57867_16293 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L555_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.040e-47 Identity = 98/209 (46.89%), Postives = 125/209 (59.81%), Query Frame = 1
Query: 19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLP 642
LL+ KT TQRE+YY F Q ++ ILD LG PR CL IV +G GRISI G W D G T G IT + L +P ++ SDA +++V+EKDG+FNRL ED F+ C +LVTG+GFP LA R V +L+ L +PVLGL DCNPFGLS+ L YK GS+R + Y V + W+GLRPS + L+LP
Sbjct: 49 LLKEDKTITQRELYYLHT-FFETQKDADECILDVGGFLGVPRECLNIVGGVKGCFTGRISIAENGL--WIDCAKDGPT-GRPITRETLRLQPEQITSDANFILVIEKDGIFNRLSEDCFFDTMPC----ILVTGKGFPDLATRCFVRKLSDCLGIPVLGLCDCNPFGLSILLTYKLGSARMPLDAMHYTVD-IRWIGLRPSHVPQLDLP 248
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A329SU04_9STRA (TP6A_N domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SU04_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.130e-46 Identity = 96/209 (45.93%), Postives = 137/209 (65.55%), Query Frame = 1
Query: 19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLP 642
LL KTATQR++YY F Q++ ++AILD ++LG PR + IVA+++G G +SI +G W R G ++IT + L +P +++S+A+ ++V+EKDG+FNRL ED F+ + +PS+L+TG+GFP LA R V L+ AL +PVLGL DCNPFGLS+ L YK GS+R S +Y V + WVG+RPSQ+ L LP
Sbjct: 119 LLTENKTATQRDVYYLH-PFFKAQSEADEAILDAGSILGIPRGSMNIVAATKGCFTGDVSILRDG--KW---RHFGSGEEVSITHELLQLKPYDMRSNAQCILVIEKDGIFNRLREDKFFEM----VPSILITGRGFPDLATRIFVSLLSNALGIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVD-IKWVGVRPSQVAGLGLP 316
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Match: A0A0P1AB95_PLAHL (Type ii dna topoisomerase vi subunit a 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB95_PLAHL) HSP 1 Score: 168 bits (425), Expect = 1.950e-46 Identity = 94/209 (44.98%), Postives = 137/209 (65.55%), Query Frame = 1
Query: 19 LLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVASSRGYLAGRISIRGEGFEDWQDPRSTGGTSGLAITSDWLT-RPLELKSDARYVVVVEKDGVFNRLVEDGFYHISSCRIPSVLVTGQGFPPLAVRACVHRLAQALHLPVLGLVDCNPFGLSVFLQYKQGSSRQGKGSAKYRVPGMAWVGLRPSQLDDLNLP 642
LL KTATQR++YY F Q++ ++AILD ++LG R + I+A+++G G ISI +G +W R G +IT + L + EL+S+A+ ++V+EKDG+FNRL ED F+ + +PS+LVTG+GFP LA R V L++AL +PVLG+ DCNPFGLS+ L YK GS+R S +Y V + W+G+RPSQ+ ++ LP
Sbjct: 84 LLAENKTATQRDVYYLH-PFFKGQSEADEAILDAGSILGVSRGSMNIIAATKGCFTGDISILRDG--EW---RYFGNGEETSITHELLQLKQSELRSNAKIILVIEKDGIFNRLREDKFFDV----VPSILVTGKGFPDLATRVFVSLLSKALRIPVLGVCDCNPFGLSIILTYKLGSARMPLESLQYAVD-IKWIGVRPSQISNIALP 281 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11398.1221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11398.1221.1 >prot_L-elsbetiae_contig11398.1221.1 ID=prot_L-elsbetiae_contig11398.1221.1|Name=mRNA_L-elsbetiae_contig11398.1221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp MRLLETRKTATQREIYYAFVKHFANQTKCNDAILDCCALLGEPRHCLGIVback to top mRNA from alignment at L-elsbetiae_contig11398:43..3877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11398.1221.1 ID=mRNA_L-elsbetiae_contig11398.1221.1|Name=mRNA_L-elsbetiae_contig11398.1221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3835bp|location=Sequence derived from alignment at L-elsbetiae_contig11398:43..3877- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11398:43..3877- >mRNA_L-elsbetiae_contig11398.1221.1 ID=mRNA_L-elsbetiae_contig11398.1221.1|Name=mRNA_L-elsbetiae_contig11398.1221.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig11398:43..3877- (Laminarionema elsbetiae ELsaHSoW15)back to top |