mRNA_L-elsbetiae_contig11394.1217.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A6H5J8M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M8_9PHAE) HSP 1 Score: 324 bits (830), Expect = 4.980e-102 Identity = 178/197 (90.36%), Postives = 185/197 (93.91%), Query Frame = 1
Query: 1 LSNVNDKLLQMANKKKLMEAEIAAKLEAQRSSPSDANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRKRGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHISKLPLLPKQMLQ 591
LSNVNDKL+ MA+KKKLMEAEIAAKLEAQRS PSD NQ SLAEALSRFKDLYADYGK RK+EVEFHL+QLERQIVPTDTTKMSLWTLEQDESFY+DRKRGSLS ILR ELGVSEEQIERIQERRARIKSLLN+LGESLRLVRDL KSSEAK KFEEVM RLQSAFSPQQIARLLLWVSANRAHISKLPLLPK +LQ
Sbjct: 396 LSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDLNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLERQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELGVSEEQIERIQERRARIKSLLNELGESLRLVRDLQKSSEAKTTKFEEVMERLQSAFSPQQIARLLLWVSANRAHISKLPLLPKTLLQ 592
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: D8LKP0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP0_ECTSI) HSP 1 Score: 183 bits (465), Expect = 6.900e-49 Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 1
Query: 1 LSNVNDKLLQMANKKKLMEAEIAAKLEAQRSSPSDANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRKRGSLSNILRTELG 333
LSNVNDKL+ MA+KKKLMEAEIAAKLEAQRS PSD+NQ SLAEALSRFKDLYADYGK RK+EVEFHL+QLERQIVPTDTTKMSLWTLEQDESFY+DRKRGSLS ILR ELG
Sbjct: 396 LSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLERQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 506
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A7S1U3Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3Q8_9STRA) HSP 1 Score: 140 bits (354), Expect = 4.040e-35 Identity = 81/185 (43.78%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 1 LSNVNDKLLQMANKKKLMEAEIAAKLEAQRSSPSDANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRKRGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHI 555
L+NV ++ + +KK MEA I LEA +S +D Q LA + FK+ YADYG R++E FH+ QLER ++PT TTKMSLWT+EQ SF++D + SL IL+ ELGV++EQ +RI R R+K + DL ++ L+RDL + K+++F+ M +L +P Q A+L+LWV NR +
Sbjct: 37 LTNVEERHKLLNAEKKAMEALIRRTLEATQSGAADPAQ--LARCIGDFKNRYADYGPQRQRECNFHMDQLERLLIPTQTTKMSLWTMEQPPSFFDDPNKNSLGAILKRELGVTQEQRDRISRLRERVKEAVRDLRAAVALLRDLREHINHKHSRFDVRMTQLMEILTPMQSAKLILWVKTNRHRV 219
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: I2CPN1_NANGC (BZIP domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPN1_NANGC) HSP 1 Score: 137 bits (346), Expect = 4.290e-34 Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 103 DANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRKRGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRA 549
DA++ +A L FK+ YADYG R+KEV FHL+QLE ++PT TTKMSLWTLEQD++F+ D + SLS IL LG+S EQ +IQ RR RI+ L++ L ESL L+ L ++ E + A+FEE M LQS +P Q +L+LWV+ N A
Sbjct: 78 DASEEEMAGYLEHFKECYADYGDQRRKEVNFHLQQLEALLLPTQTTKMSLWTLEQDDTFFRDTGKTSLSAILLETLGISIEQKSKIQARRERIRHLVDHLKESLGLLGRLKENVEGRYARFEEHMGSLQSVLTPTQRVQLVLWVTKNEA 226
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A7S4DKP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKP9_HETAK) HSP 1 Score: 129 bits (323), Expect = 1.280e-29 Identity = 81/207 (39.13%), Postives = 124/207 (59.90%), Query Frame = 1
Query: 1 LSNVNDKLLQMANKKKLMEAEIAAKLEAQRSSPSDANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRK-RGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRA---------HISKLPLLPKQMLQ 591
L N DK Q+A +K ME ++ A+L+ + L ++KDLY+DYG+ RKKEV+FHL QL+ + PT TTKMSLWTLEQDE+F+ D SL IL E+G++ EQ +I+ R++I L+ +L +S+ L++ + +AK+ KF++ M LQ+ +P+Q +LLLW++ N+ H + PL K+ LQ
Sbjct: 212 LQNTEDKASQIAEQKFKMEKQLRAELQI--------GGTGIGPLLRQYKDLYSDYGEQRKKEVDFHLAQLQTLLTPTTTTKMSLWTLEQDEAFFADEADETSLMYILTQEMGLTPEQKTKIKGHRSKILGLVEELKKSVVLMQKIRDMVQAKHKKFDKHMGNLQALLTPKQSVQLLLWITNNKKLLEGYVPDFHQEEQPLEEKEQLQ 410
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A7S1GL93_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL93_CYCTE) HSP 1 Score: 121 bits (304), Expect = 8.010e-27 Identity = 71/185 (38.38%), Postives = 114/185 (61.62%), Query Frame = 1
Query: 1 LSNVNDKLLQMANKKKLMEAEIAAKLEAQRSSPSDANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRKRGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHI 555
L+NV+++ + +++ E E+ +R + A+ L LS+F ++Y+DYG+HR +E+ FHLKQLER PT+ TKM LWTL Q E+F+ D KR ++ ILR ELG++ +Q +I E+R +I+ L L E L L+ +L E K + + M++ Q +P+Q+ +LLLWV + +HI
Sbjct: 248 LANVSNRSEKFEEERRKQEHEM------RRLAEGGASSEQLRPLLSKFSEMYSDYGRHRDEELSFHLKQLERLAAPTNFTKMGLWTLGQSEAFFTDLKRNPIAGILRKELGITPQQGRKILEKRQKIRDLCTSLKECLGLLANLKTICEHKQKVYHDRMSKCQQILTPRQVVKLLLWVD-DHSHI 425
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A0P1AA06_PLAHL (Camp responsive element modulator n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA06_PLAHL) HSP 1 Score: 107 bits (266), Expect = 4.210e-23 Identity = 61/162 (37.65%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 106 ANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFY-EDRKRGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHISKLPLLPKQML 588
A++ LAE + FK+ Y+DYG R+ + +HL Q+ER ++PT TKM +W L QD+SF+ E+ SL IL ELG+SE+Q ++IQ++R I + +L +L L+ +L KN+ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 78 ASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQEEEDETSLPVILAKELGLSEDQKKKIQQQRGSISLICENLKSALELLAELKTEVTNKNSTLDTEMEKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRTVL 239
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A8K1CBI5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBI5_PYTOL) HSP 1 Score: 108 bits (271), Expect = 3.270e-22 Identity = 62/162 (38.27%), Postives = 103/162 (63.58%), Query Frame = 1
Query: 106 ANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFY-EDRKRGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHISKLPLLPKQML 588
A++ LAE + FK+ Y+DYG R+ +++HL Q+ER ++PT TKM +W L QD+SF+ +D SL IL ELG+SEEQ ++IQ++RA ++ ++L +L L+ +L +KN + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 330 ASEKELAEKIDNFKEQYSDYGHGRRSALDYHLHQIERLLLPTQVTKMCIWALRQDDSFWHDDEDDTSLPAILARELGLSEEQKKKIQQQRAPFLAICDNLKTALGLLNELKTQVASKNTTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 491
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: H3GV10_PHYRM (BZIP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GV10_PHYRM) HSP 1 Score: 107 bits (268), Expect = 6.710e-22 Identity = 62/162 (38.27%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 106 ANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRK-RGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHISKLPLLPKQML 588
A++ LAE + FK+ Y+DYG R+ + +HL Q+ER ++PT TKM +W L QD+SF++D + SL IL ELG+SE+Q ++IQ++R I + +L +L L+ DL KN+ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 304 ASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELGLSEDQKKKIQQQRGSISLICENLKSALGLLSDLKTEVINKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 465
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Match: A0A3M6VDY9_9STRA (BZIP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDY9_9STRA) HSP 1 Score: 107 bits (267), Expect = 7.200e-22 Identity = 62/162 (38.27%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 106 ANQGSLAEALSRFKDLYADYGKHRKKEVEFHLKQLERQIVPTDTTKMSLWTLEQDESFYEDRK-RGSLSNILRTELGVSEEQIERIQERRARIKSLLNDLGESLRLVRDLHKSSEAKNAKFEEVMARLQSAFSPQQIARLLLWVSANRAHISKLPLLPKQML 588
A++ LAE + FK+ Y+DYG R+ + +HL Q+ER ++PT TKM +W L QD+SF++D + SL IL ELG+SEEQ ++IQ++R I + +L +L L+ +L KN+ + M +LQ+ +P Q A+ ++WV+ N+A + L L + +L
Sbjct: 277 ASEKELAEKIESFKEKYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELGLSEEQKKKIQQQRGSISLICENLKSALGLLGELKTEVTNKNSTLDMEMDKLQNILTPTQRAKFIVWVTNNQACMHLLNKLWRSVL 438 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11394.1217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11394.1217.1 >prot_L-elsbetiae_contig11394.1217.1 ID=prot_L-elsbetiae_contig11394.1217.1|Name=mRNA_L-elsbetiae_contig11394.1217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MANKKKLMEAEIAAKLEAQRSSPSDANQGSLAEALSRFKDLYADYGKHRKback to top mRNA from alignment at L-elsbetiae_contig11394:2115..5943- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11394.1217.1 ID=mRNA_L-elsbetiae_contig11394.1217.1|Name=mRNA_L-elsbetiae_contig11394.1217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3829bp|location=Sequence derived from alignment at L-elsbetiae_contig11394:2115..5943- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11394:2115..5943- >mRNA_L-elsbetiae_contig11394.1217.1 ID=mRNA_L-elsbetiae_contig11394.1217.1|Name=mRNA_L-elsbetiae_contig11394.1217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig11394:2115..5943- (Laminarionema elsbetiae ELsaHSoW15)back to top |