mRNA_L-elsbetiae_contig11390.1216.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11390.1216.1
Unique NamemRNA_L-elsbetiae_contig11390.1216.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A6H5L155_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L155_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 2.140e-135
Identity = 230/285 (80.70%), Postives = 244/285 (85.61%), Query Frame = 1
Query:    1 TRHRYVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPLGLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQE-SLPA---GAXXXXXXXXXEPPADTSAE---VALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
            T   YVWA+LMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVG++PAASPAYDTVNQ+FVPLAVPLLLFDADLQKVLRFAGTLLACF IGAAGTVIGTA A AVVPLGLG DGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFW+TKP++QE S PA   G+         E     + +    A  XXXX   PLAVTKE ISYALTAACALCLCGELLS V FGGR+SAIPL+TLVTVAGAT APS VGRLG+VGAQ+G
Sbjct:  216 TNRWYVWAVLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGIIPAASPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWVTKPDRQEQSAPATREGSTKAIGSAQEEAAPTATPQPLSAATXXXXXXXXPLAVTKETISYALTAACALCLCGELLSKVAFGGRVSAIPLLTLVTVAGATAAPSWVGRLGSVGAQLG 500          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: D8LIU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIU9_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 5.540e-126
Identity = 217/302 (71.85%), Postives = 228/302 (75.50%), Query Frame = 1
Query:    1 TRHRYVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPLGLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAIS------------------------YALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
            T   YVWA+L+ASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGV+PAASPAYDTVNQ+FVPLAVPLLLFDADLQKVLRFAGTLLACF IGAAGTVIGTA A AVVPLGLG DGWKIASALAARHIGGAVNYVAVCETLGVSADA+VAGLAADNMVVSLYFIFLFWITKP++QE               EP   T+     T    S                                    YALTAACALCLCGELLS V FGGR+SAIPLVTLVTVAGAT APS VGRLG+VGAQ+G
Sbjct:  157 TNRWYVWAVLIASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPAASPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVPLGLGGDGWKIASALAARHIGGAVNYVAVCETLGVSADAIVAGLAADNMVVSLYFIFLFWITKPDRQE---------------EPTPATTTRQGSTKAIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYALTAACALCLCGELLSKVAFGGRVSAIPLVTLVTVAGATAAPSWVGRLGSVGAQLG 443          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A835YW30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW30_9STRA)

HSP 1 Score: 277 bits (708), Expect = 2.080e-88
Identity = 152/274 (55.47%), Postives = 194/274 (70.80%), Query Frame = 1
Query:   13 YVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPLGLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
            Y+W  LM +SS GLWSE T+WGAA+SSPLVTML+TIT CN+GVLP ASP Y  VN+  VPLAVPLLL+DADL++V++++GTL+ACF +GA GTV+GT VA  +VPLG+G+DGWKIA+ALA+RHIGGAVNYVAV ETL +SA+AVVAGLAADN+VV+LYF FLF++ K +   +   G          E P+    E  +      P    V K+ ++YAL A CAL   G  ++     G IS IP+ +L+TVA A+  P V+  LG  GAQVG
Sbjct:    7 YLWTFLMWASSFGLWSENTKWGAALSSPLVTMLITITACNIGVLPTASPVYTCVNKYLVPLAVPLLLYDADLKRVMKYSGTLMACFMLGAVGTVLGTVVAAKLVPLGMGADGWKIAAALASRHIGGAVNYVAVAETLSMSAEAVVAGLAADNLVVALYFAFLFYMAKGDAGTAAGGG-------DAPETPSGGGGEGDMGPPTVDPASPLVGKDGLAYALAAGCALTFAGNAIAAGPLRGAISGIPITSLLTVAAASAFPKVLAPLGVAGAQVG 273          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A7S3XZE0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZE0_HETAK)

HSP 1 Score: 219 bits (557), Expect = 8.830e-65
Identity = 125/274 (45.62%), Postives = 175/274 (63.87%), Query Frame = 1
Query:   13 YVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPLGLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
            Y+W  LM S++ GLWSERT+ GA +SSPLVTM +TI +CN+G+LP+ + AYD +N+  VPLAVPLLLFDA+++ VLR  G+++A F +GA GT++GT V   +VPLGLG D WK+ +AL ARHIGGAVNYVAV ET+ +  DA+ AGLAADN+V++LYF F+FW+      +   A              AD S +VA          L    +++S+     C LCL   +     + G +S IP+V++ TVA A++AP +   L   G ++G
Sbjct:   98 YIWTALMGSATFGLWSERTKLGATLSSPLVTMAVTILMCNLGLLPSHNAAYDVINKTLVPLAVPLLLFDANIKMVLRSTGSMMAAFLLGALGTIVGTLVGARLVPLGLGEDSWKVVAALCARHIGGAVNYVAVSETVAMGPDALTAGLAADNLVIALYFSFIFWLANKAPDDGDGAAQVSNSQGGGG---ADDSPQVAGNQFN-----LLNVMKSVSFG----CTLCLISSITKAFFYPG-LSIIPIVSVATVAAASIAPGLFRPLTLSGGKIG 358          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A7S4D9J7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9J7_HETAK)

HSP 1 Score: 209 bits (533), Expect = 6.440e-63
Identity = 99/165 (60.00%), Postives = 132/165 (80.00%), Query Frame = 1
Query:   13 YVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPLGLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWI 507
            Y+W  LM S++ GLWSERT+ GA +SSPLVTM +TI +CN+G+LP+ + AYD +N+  VPLAVPLLLFDA+++ VLR  G+++A F +GA GT++GT V   +VPLGLG D WK+ +AL ARHIGGAVNYVAV ET+ +  DA+ AGLAADN+V++LYF F+FW+
Sbjct:   98 YIWTALMGSATFGLWSERTKLGATLSSPLVTMAVTILMCNLGLLPSHNAAYDVINKTLVPLAVPLLLFDANIKMVLRSTGSMMAAFLLGALGTIVGTLVGARLVPLGLGEDSWKVVAALCARHIGGAVNYVAVSETVAMGPDALTAGLAADNLVIALYFSFIFWL 262          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: W7TV24_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TV24_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.040e-59
Identity = 127/267 (47.57%), Postives = 172/267 (64.42%), Query Frame = 1
Query:   13 YVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPLG----LGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITK---PEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAP 792
            +VW+ML+ +S+ G+ +ERT+ GAA+SSPL+TM + +  CN+G LP+A+PAY +VN+  VPLA+PLLL DA+L KVL   G LL  F +G+ GTV+GT +A   VPLG     G +GW IA+ALA+RHIGGAVN+VAV ETLG+SA+   AG+AADN+VVS YF  LFW+ +   PE +     G          EP      E A T     PP L   K     AL+ A  LC+ G  +S  +  G IS+IP+++L++VA AT+ P
Sbjct:  104 WVWSMLLLASTTGVAAERTKIGAALSSPLITMAVALVACNLGFLPSAAPAYTSVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFVLGSIGTVLGTLIAAWFVPLGSLGAAGKEGWMIAAALASRHIGGAVNFVAVSETLGMSAELTAAGIAADNLVVSFYFGLLFWLARDLEPEDEVLHANGGGGGGPKGTREP-----VEQA-TWSATEPPSLGYLK-----ALSLASLLCMVGTWVSEGLLQGAISSIPVISLLSVATATLFP 359          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: B8C2C6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2C6_THAPS)

HSP 1 Score: 181 bits (459), Expect = 5.960e-51
Identity = 117/279 (41.94%), Postives = 169/279 (60.57%), Query Frame = 1
Query:    7 HRYVWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPL-GLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPP--PLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
            H Y W  +          ++T +G A+S+PLVTML+++ L NVGV+P  SPAY  +N+I VPLAVPL LFD+D+++V+R AG+LL  F +GA  TV+GT  A A+VPL  LG  GWK+ASAL ARHIGGA+N+VAV +TL +    V A +AADN+VV+LYF FLF++       ++  G             + T ++ AL+     P   PL +T  +I+Y+L  A  L   G  L++ +    +S++ + +L+TVA AT  PS    L + G  +G
Sbjct:   23 HHYTWCGIAME-------QKTTFGKALSAPLVTMLISLCLANVGVMPFTSPAYGLINRILVPLAVPLFLFDSDIKRVVRDAGSLLMAFLVGAVSTVVGTLGALALVPLKSLGDQGWKVASALTARHIGGAINFVAVADTLSLDGGIVSAAIAADNVVVALYFAFLFYLA------TVGEGTRDNLNNESKANVSSTISDNALSEEIVIPDEKPLPITTSSIAYSLATASCLVTVGGWLTSAICP-TLSSMVITSLLTVASATAFPSWFQSLRSSGTAIG 287          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A1Y1IFH7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFH7_KLENI)

HSP 1 Score: 181 bits (460), Expect = 2.970e-50
Identity = 124/274 (45.26%), Postives = 160/274 (58.39%), Query Frame = 1
Query:   16 VWAMLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPL-GLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNV----VFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVG 822
            VWA L+A+ +AGLWSE+T  G A+S PLV+ L+ + L N+GVLPAA+PAY  VN+  +PLAVPLLLF AD+++V    G L   F +GAA TV G+  A ++ PL  LG DGWK+A+AL +RHIGGAVNYVAV E L  S+  V AGLAADN++ +LYF  +F         +L AG          +P A TS+ +              T    S AL  + A+C  G  LS +    V GG I   P +T V VA AT+ P  VG L   G
Sbjct:  122 VWAFLLAAGAAGLWSEKTTLGQALSGPLVSTLIGLALSNLGVLPAAAPAYAVVNKFLLPLAVPLLLFSADIKRVFSETGRLWLAFLLGAAATVAGSFAALSLFPLRSLGEDGWKMAAALMSRHIGGAVNYVAVSEALQTSSSMVAAGLAADNLICALYFTLVF---------ALAAGIPPD------QPSAATSSPITSAALPPEEGKSTFTVLEGSTALALSAAICAVGSRLSKLPALRVLGGGI---PCMTAVVVALATLLPKQVGALAPAG 377          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A1E7EVM0_9STRA (DUF819-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM0_9STRA)

HSP 1 Score: 177 bits (450), Expect = 6.300e-50
Identity = 108/260 (41.54%), Postives = 154/260 (59.23%), Query Frame = 1
Query:   61 ERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPL-GLGSD-GWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
             RT  G A+S+PL TM + +   N+G++P  SP Y  VN+ FVPLA+PLLLFD+DL++V++  GTLL  F +GA  TV  T +   ++PL  LG D GW++A ALAARHIGGA+N+VAV ETL +  DAV A +AADN+VV+LYF FLF I K +  +               E    T +EVA+        P ++T   ++ +L+ A +L   G  L+ V+    +S++PL++ +TV  AT  P     L   G  +G
Sbjct:   17 RRTMIGKALSAPLATMAIALIFANIGIIPFQSPIYTIVNRFFVPLAIPLLLFDSDLKRVIKDTGTLLTAFGVGAFATVFATIITFPIIPLKSLGGDVGWRVACALAARHIGGAINFVAVAETLNIGGDAVAAAIAADNVVVALYFAFLFSIAKADNPKD----------DDDDEAQQFTISEVAVEDGK----PSSITLPTLAISLSVASSLVTAGTFLTKVLLPAGVSSLPLISTLTVIAATAFPKFFSSLSETGTALG 262          
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Match: A0A7S3PV23_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV23_9STRA)

HSP 1 Score: 178 bits (451), Expect = 8.300e-50
Identity = 113/276 (40.94%), Postives = 164/276 (59.42%), Query Frame = 1
Query:   13 YVWAMLMASSSAGLWSER-TRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTVNQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVVPL-GLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMVVSLYFIFLFWITKPEKQESLPAGAXXXXXXXXXEPPADTSAEVALTXXXXSPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVAGATVAPSVVGRLGNVGAQVG 834
            YV  ++M  S+ G+  ER T +G A+S+PLVTM + +   NVGV+P  SP Y  +N   V LAVPLLLFD++L+ ++   GTLL CF +GA  T+IGT +   ++PL  LG +GWKIASALAARHIGGA+N+VAV ETLG++  AV A +AADN+VV+LYF  LF++  P   E               EP      +  +     S   + +T  ++S ++ AA  L   G++ +       +S++PL+++ TV GAT+ P+    L   G  +G
Sbjct:   14 YVLTVIMILSTVGINLERKTAFGKALSAPLVTMGMALITANVGVVPFKSPIYTFINANLVALAVPLLLFDSNLRTLVNDTGTLLLCFIVGAISTIIGTVLTFPLLPLRSLGGNGWKIASALAARHIGGAINFVAVSETLGITGSAVSAAIAADNVVVALYFAILFYLAVPGDGEE---------DAKLDEPKEQVQLKTPIDPEDISVDGVGITLPSLSTSMAAASCLVALGKIATAAFCRTGMSSLPLISMFTVIGATIFPTFFSTLTITGTTIG 280          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11390.1216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L155_9PHAE2.140e-13580.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIU9_ECTSI5.540e-12671.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YW30_9STRA2.080e-8855.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XZE0_HETAK8.830e-6545.62Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4D9J7_HETAK6.440e-6360.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TV24_9STRA3.040e-5947.57Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
B8C2C6_THAPS5.960e-5141.94Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1Y1IFH7_KLENI2.970e-5045.26Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A1E7EVM0_9STRA6.300e-5041.54DUF819-domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S3PV23_9STRA8.300e-5040.94Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11390contigL-elsbetiae_contig11390:287..5361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.7
Seed ortholog evalue9.3e-99
Seed eggNOG ortholog2880.D8LIU9
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Protein of unknown function (DUF819)
EggNOG OGs2QQM4@2759,COG5505@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF819
Ec32 orthologEc-20_001620.1
Exons6
Model size834
Cds size810
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815346.8840606-CDS-L-elsbetiae_contig11390:286..3741622815346.8840606-CDS-L-elsbetiae_contig11390:286..374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 287..374 -
1691682852.544999-CDS-L-elsbetiae_contig11390:286..3741691682852.544999-CDS-L-elsbetiae_contig11390:286..374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 287..374 -
1622815346.8933501-CDS-L-elsbetiae_contig11390:915..11901622815346.8933501-CDS-L-elsbetiae_contig11390:915..1190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 916..1190 -
1691682852.562956-CDS-L-elsbetiae_contig11390:915..11901691682852.562956-CDS-L-elsbetiae_contig11390:915..1190Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 916..1190 -
1622815346.9023895-CDS-L-elsbetiae_contig11390:3040..31031622815346.9023895-CDS-L-elsbetiae_contig11390:3040..3103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 3041..3103 -
1691682852.5746956-CDS-L-elsbetiae_contig11390:3040..31031691682852.5746956-CDS-L-elsbetiae_contig11390:3040..3103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 3041..3103 -
1622815346.9142728-CDS-L-elsbetiae_contig11390:3757..39231622815346.9142728-CDS-L-elsbetiae_contig11390:3757..3923Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 3758..3923 -
1691682852.584975-CDS-L-elsbetiae_contig11390:3757..39231691682852.584975-CDS-L-elsbetiae_contig11390:3757..3923Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 3758..3923 -
1622815346.9277663-CDS-L-elsbetiae_contig11390:4727..47891622815346.9277663-CDS-L-elsbetiae_contig11390:4727..4789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 4728..4789 -
1691682852.6034064-CDS-L-elsbetiae_contig11390:4727..47891691682852.6034064-CDS-L-elsbetiae_contig11390:4727..4789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 4728..4789 -
1622815346.9386387-CDS-L-elsbetiae_contig11390:5181..53371622815346.9386387-CDS-L-elsbetiae_contig11390:5181..5337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 5182..5337 -
1691682852.615295-CDS-L-elsbetiae_contig11390:5181..53371691682852.615295-CDS-L-elsbetiae_contig11390:5181..5337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11390 5182..5337 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815346.9477763-UTR-L-elsbetiae_contig11390:5337..53611622815346.9477763-UTR-L-elsbetiae_contig11390:5337..5361Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11390 5338..5361 -
1691682852.62405-UTR-L-elsbetiae_contig11390:5337..53611691682852.62405-UTR-L-elsbetiae_contig11390:5337..5361Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11390 5338..5361 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11390.1216.1prot_L-elsbetiae_contig11390.1216.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11390 287..5337 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11390.1216.1

>prot_L-elsbetiae_contig11390.1216.1 ID=prot_L-elsbetiae_contig11390.1216.1|Name=mRNA_L-elsbetiae_contig11390.1216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp
MLMASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVLPAASPAYDTV
NQIFVPLAVPLLLFDADLQKVLRFAGTLLACFAIGAAGTVIGTAVAGAVV
PLGLGSDGWKIASALAARHIGGAVNYVAVCETLGVSADAVVAGLAADNMV
VSLYFIFLFWITKPEKQESLPAGAGASATAASAEPPADTSAEVALTSTAT
SPPPLAVTKEAISYALTAACALCLCGELLSNVVFGGRISAIPLVTLVTVA
GATVAPSVVGRLGNVGAQVG
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mRNA from alignment at L-elsbetiae_contig11390:287..5361-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11390.1216.1 ID=mRNA_L-elsbetiae_contig11390.1216.1|Name=mRNA_L-elsbetiae_contig11390.1216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5075bp|location=Sequence derived from alignment at L-elsbetiae_contig11390:287..5361- (Laminarionema elsbetiae ELsaHSoW15)
ACACGCCACAGGTACGTGTGGGCGATGCTGATGGCGTCTTCGAGCGCTGG GTTATGGTCCGAGCGCACCCGTTGGGGCGCCGCCGTTTCTTCACCCCTCG TGACCATGCTGCTCACCATAACGCTGTGCAACGTCGGGGTTCTCCCGGCA GCTTCGCCGGCTTATGACACCGTAAACCAGGTGAATGGCGGATATAAATA CAGGGGTTGTAGGTGCTTTTTGCGGGTTCCCGTTCGTTTCCAGCCGTGTA ATTTACGGAAGCCGGCTTTCCGTGTTCAAAGTTTTGCAACGAGCGCTCTG TTGTTCCGATCCTCTGCTCTGTTCTGCGCTCGCACCACGTGAAAACATCT GTAGCTTCTTGAGTATTGCAAGTTGCCGCGCGTAACGTCGGCTTTCGCCG GCCTTTCGACGCCGAAACGGGGCTCAACTTGTGTGTCTCTAGCTAAACGG TTGCTTCTTGTGTTGTGGTAGTGCCGCTATTCCCTGCGAGGCTGGTGCTG ACGCCGTTGCACTACTTGTTGTTCTTGTTGGCCCCTCCCGGCATGACCCC CCGCCCTACCCCCGGCTCGTAGATTTTCGTGCCCCTGGCCGTGCCGCTGT TGCTGTTCGACGCCGACCTCCAGAAAGTACTCAGGTGAACGAAATATCAC GAACGAATGAACGAGCACTACCGCCATCGCGGAATACCCAGCTCAAGAGT ACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGAAGCCGCAGAACGCGC CCGCACCCCGCGGCCGCAGCAGGCCGGCTTNNNNNNNNNNTAATAAAGAC AAGGCAAACAAAAAAAACCCAACACCTGCCCCCCCCCCCCCCCCCCCGAC CACTTCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACGCACGAA CAAGGATGACGAAACGATCGAAACTTCGCCTGCGAGATACAGTAGTCTAG GATAGTGTACAGCGCTGCTCTCTCTCGCCTTCGGACCGAAAATGAGAGTG GCCGGGTCTCGTGAGTGATGCGATGTTGTACGACCCGTCGGTCTCATGTG CGATTGCGATTGCGAGTGCGAGTGCGGTAGTTTGATTTGCAGGTAGGACG GTGTTGAATTTAAGCTTGTGTCATGATGTCGATTTGCTGGCCTATTTAGG TTTTGATGTACGAAGTCGGACCTTGAACCTTGCCGTGGCGTTTGCCATCG GCGGGGCGGTAGACAGTTGTGATGCCGCGTCAGATGTTCTTTCGGGCTGA CTAGTTTTGCTTTTTGGCATTCCGAAATAGACACTTCGGAATGTACGTAC TTTAGTCTATTGTTGATGCGACAGCCGGACTACTCATGAAGATATAAGAA TTGCATTTTACCCTGGACGATTTTGCTGCTTTTTGGACTCACCACCACCC GTCCTCACCTGCTCCAAAAAAATCGATGTTTTCACAAGGTTTGCCGGAAC CTTGTTGGCTTGTTTTGCCATCGGGGCTGCGGGAACGGTGATTGGCACGG CCGTGGCGGGGGCGGTGGTACCCCTTGGGCTTGGTTCTGACGGCTGGAAG ATCGCTTCGGCGCTCGCGGCCCGACACATTGGTGGGGCCGTGAACTACGT GGCAGTGAGTCGTTAGTGCTGCTGTTGCTACTGTTGCTGTATACAATGGG TGCTTTCCATGGAGTACCCATACTGGGCGGCGCATTTTTGCTGCGCTGCT GTCCGTGCTACAGTAGTGTGCCATGCCATGCCATGCCATGTCATGTTGCA CCTAGCCGCATTATCATGGGTTTTGTCAGGTCGTATCGGCACCATTCGCA TTTTTGTCCTCGTTGAGGAGACAATGCTTTGTTGATGTGAGCAATCGTTT TCGCTGCCCTGGAGTTCGGTGGCCAGGCGCCTTCGGGGTCATCTTTGTGA TGGCCTTGTGCCTTCCACGCCGCACTGTTTGCCCCCGCTTTTTTCTTATT GCCCTTTCTCGCAAAGATATCCGGGAGTAGTGCGCAACGTTTTTCAGATG CCACGGAGCGGAGCGCATGTCAACTTGTGAGAAATTGCACGGACCTTCGT GGAAAGAGTGTATCCGCCTGCCGACCTCGTCTCGGGGCGAAGCGATTTTT TGCTTGAGCTTTCGCGGAGCGGAGCGGATACCCGCTTGTTGACATCGCGG AGCGGTGGCCCGCCTATCAAAAGCGATACAGAGGGTAACCACTCCGCCAC CGCGAGAAGACGTACCTACTCCGACCCCCCTCCCACGCCGTTTTGCTCGA CCTGGCAGGTATGCGAAACCCTTGGAGTTTCGGCGGATGCAGTAGTGGCC GGGCTAGCCGCCGACAACATGGTAAGCAACAGAAGTAAATAGTGTTATTT GCTGTTTTGGCGCCCGTGCATGCGTGTTCCGCATATTTTGTGGTGTGAAC GCTGTGCTATATTTACTGTAGGACGTTTCGAGCTCGTGAACGTTACCAGT TTGACCACCCGGGCGACGCAATCGATCCACAGTATATGTCGTGCTACATT ACATATTTATAGTACGTGGAAAAGAAAAACAGCATACAACAAAAAATAAT GCGAGGAAGAGAGAGGGAGAGATCAAAATAGTGAGAAAACGAGAAGAGCT CAAAAGAAAGAGAGGAAACAATAGAGAGACAAAAGAGAAAACAAAAAGAT AAAACGGGGGGTGGGGGAAAGAAAATGTTGTGATCGTAATTGGCGATCGA ACTGAGATCAAATTGGCCACGAGCGATTCAATCTGATACTCTACTCGACC ACTCATAGGCACAATCGCTTGTGATATTTATTTAACATCTCAAGCCCAAA ATTATTCAGAACGCTGCGGATGCTTTTACCTTGAGAACACTTTGCGTTCG ATAGAGGTGTACCCCTTCACTTTATGATTGTGTGTAACGGATGTAGGAGT GGATGGCGTGATCAGGTGTAACGGGCGTTACGTGCATGATTTGGGGTGCA GTGGATGTAGGGGCCATGATTATACGTAACGGATATAACGGGTGTGATCG AGTGTAACGGACGTAACGGACTAGGTGTTACGAGCGTAACGGGCAAACGG ATGTAACCGACGTGCTTGTTGTGCGTAACGTGTAGCGGACGTGGCAAGGT GTATCGAATGTAACGGGATTTGACAAGGTGTAACGGGTGTAACGGACCTG ACTAGGTGCAGCGGGCAAACGGATGTAACCGGCGTGCTTGTTGTGTGTAA CGTGTGACTAGATGTATCGACTGTAGCGGACGTAACTAGGTGTAACGGGC ATGATTGTGTGTAACGGATGTAACGGACGTGACAAGGTGTAATTGATGTA ACGGGCGTGGCTAGGGATAACGGGTGTAACGAGCATGACTGTGCCTGACA GGTGTGGCAGGTGTAACGCACAGATTAGGCAGTACGGGCATAACAGACGT GTTTGTGTGTAACAGATGTAGCGGCCATGATTGTATGTAACGGATGTAAC GGGCGTGACCAGGGTGTAACGGACGTGGCTAGGTGTAACGGGTGTAGCCG GAAAAGTGGCTAAGTGTATCGGATGTAACACATATGACTAGGTGTAACCG GTGTATCGGATGTAACATATATTACTGTGTGTAACTGGTGCACCCGACCC GACTATTGGTGCAACGGATGTAACGGACATGATCAGGTGTAACGGAGGTA GCGGACGTGACTAGGTGTATCGAATGTAACGGATATGATTGTGTGTAATA GGTGTGGTGGACGTGATTATATAGGTATAACGGGCATGATTGTGTACCGG GTGTAACGGGCATGGTTGTAGCGGATGTAGATAACCCTTGCATTTTAGAC GGCTCGGGTGGTGCTTGAACGCCCTACCTCCAACGAATGTATTCGATTGG CTTTCTTGGCTGCGGCCCACTTGCCATTTCTGGATTGTGTTGTTGTCGTG TTGACTTGCGTGTCTTTTCGACCCTTGATGTTCCCGTCTTCGGTCATGTC TTCTTGTCGGTTGTTATTTTCCTCGCTACTTCAGCTTCTTGCTCCTTCGT GGTGGGTGCGTCCCTTTTCACGACACCATGATGGTACTTTTTCTTGATTC CCATCAGCACTTGGGTTGCCTCGTTGCTGTATTACGGTATATTTTTATTC TTGTTTGTTTGCGGTTGCGTGACCGACTGCCGATTTGTTTGTTTCTTGTC TTTCTTTGATGAGGCGTGCAGGTGGTTTCCCTGTACTTCATCTTTCTCTT TTGGATCACGAAGCCGGAAAAGCAGGAAAGCTTACCCGCAGGAGCCGGAG CGTCGGCAACAGCAGCGTCAGCAGAACCTCCGGCAGATACATCGGCAGAA GTAGCGCTGACATCGACAGCAACATCGCCACCCCCACTGGCGGTCACGAA GGAAGCGATATCCTACGCGCTGACAGCGGCGTGCGCGCTCTGCCTGTGCG GGGAGCTGCTTTCCAACGTGGTATTCGGTGGGAGAATAAGCGCAATGTGA GGTTCTGGTGCGGTTTTCCAACCCCCCACCAACAGGTCATTTTATGCCCA GCGACGTTGCCAAAAGGGATTCCGTTTTGCGAGTTGCAGGACTCGAAATC CCGGCATGTCATCGAGAATTTAATTTTCTTGGTGCTGCTTCTTCGCTTCG CTCCCCTTTGCTTCCCTTGGCTTCGCTTTGTTTCACGCTCTTCTTCGCTT TGCTTTGCTTCGCCCTCCACGGTGCGATCCGTCTCCCTCTTGAACGCTTC TAGACACCACCCACATCCCCGCATCAGACGCGCACGGAAGCGACAGTGAC GAGGTTTTAGTGTTAGGTATGTCAGCGCGACAACGTTATCGTCGCCGTCG TTCGCAAACAGGCGGACAGGCACTAAAAGAAGCGTGCTTCTAGCGATACA GTTCGCCCCCGTCATCGCTTTCACGTGTTTTATGTTTCTTGCCTGTTTGC CTCTCCGTCGCCTGCCTGCCTGCCTGGTGCACCCCGGGGAATGTTTGTTC TCCTTGTCCGGCGACAACCACGTTGTTCGTGCTCTAGTCCGTTGGTTACT TTGGTGACGGTGGCGGGAGCTACGGTTGCGCCGTCCGTCGTCGGGAGGCT TGGCAACGTCGGAGCACAGGTGGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11390:287..5361-

>mRNA_L-elsbetiae_contig11390.1216.1 ID=mRNA_L-elsbetiae_contig11390.1216.1|Name=mRNA_L-elsbetiae_contig11390.1216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1620bp|location=Sequence derived from alignment at L-elsbetiae_contig11390:287..5361- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGATGGCGTCTTCGAGCGCTGGGTTATGGTCCGAGCGCACCCGTTG
GGGCGCCGCCGTTTCTTCACCCCTCGTGACCATGCTGCTCACCATAACGC
TGTGCAACGTCGGGGTTCTCCCGGCAGCTTCGCCGGCTTATGACACCGTA
AACCAGATGCTGATGGCGTCTTCGAGCGCTGGGTTATGGTCCGAGCGCAC
CCGTTGGGGCGCCGCCGTTTCTTCACCCCTCGTGACCATGCTGCTCACCA
TAACGCTGTGCAACGTCGGGGTTCTCCCGGCAGCTTCGCCGGCTTATGAC
ACCGTAAACCAGATTTTCGTGCCCCTGGCCGTGCCGCTGTTGCTGTTCGA
CGCCGACCTCCAGAAAGTACTCAGATTTTCGTGCCCCTGGCCGTGCCGCT
GTTGCTGTTCGACGCCGACCTCCAGAAAGTACTCAGGTTTGCCGGAACCT
TGTTGGCTTGTTTTGCCATCGGGGCTGCGGGAACGGTGATTGGCACGGCC
GTGGCGGGGGCGGTGGTACCCCTTGGGCTTGGTTCTGACGGCTGGAAGAT
CGCTTCGGCGCTCGCGGCCCGACACATTGGTGGGGCCGTGAACTACGTGG
CAGTTTGCCGGAACCTTGTTGGCTTGTTTTGCCATCGGGGCTGCGGGAAC
GGTGATTGGCACGGCCGTGGCGGGGGCGGTGGTACCCCTTGGGCTTGGTT
CTGACGGCTGGAAGATCGCTTCGGCGCTCGCGGCCCGACACATTGGTGGG
GCCGTGAACTACGTGGCAGTATGCGAAACCCTTGGAGTTTCGGCGGATGC
AGTAGTGGCCGGGCTAGCCGCCGACAACATGGTATGCGAAACCCTTGGAG
TTTCGGCGGATGCAGTAGTGGCCGGGCTAGCCGCCGACAACATGGTGGTT
TCCCTGTACTTCATCTTTCTCTTTTGGATCACGAAGCCGGAAAAGCAGGA
AAGCTTACCCGCAGGAGCCGGAGCGTCGGCAACAGCAGCGTCAGCAGAAC
CTCCGGCAGATACATCGGCAGAAGTAGCGCTGACATCGACAGCAACATCG
CCACCCCCACTGGCGGTCACGAAGGAAGCGATATCCTACGCGCTGACAGC
GGCGTGCGCGCTCTGCCTGTGCGGGGAGCTGCTTTCCAACGTGGTATTCG
GTGGGAGAATAAGCGCAATGTGGTTTCCCTGTACTTCATCTTTCTCTTTT
GGATCACGAAGCCGGAAAAGCAGGAAAGCTTACCCGCAGGAGCCGGAGCG
TCGGCAACAGCAGCGTCAGCAGAACCTCCGGCAGATACATCGGCAGAAGT
AGCGCTGACATCGACAGCAACATCGCCACCCCCACTGGCGGTCACGAAGG
AAGCGATATCCTACGCGCTGACAGCGGCGTGCGCGCTCTGCCTGTGCGGG
GAGCTGCTTTCCAACGTGGTATTCGGTGGGAGAATAAGCGCAATTCCGTT
GGTTACTTTGGTGACGGTGGCGGGAGCTACGGTTGCGCCGTCCGTCGTCG
GGAGGCTTGGCAACGTCGGAGCACAGGTGGGATCCGTTGGTTACTTTGGT
GACGGTGGCGGGAGCTACGGTTGCGCCGTCCGTCGTCGGGAGGCTTGGCA
ACGTCGGAGCACAGGTGGGA
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