mRNA_L-elsbetiae_contig1139.1215.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1139.1215.1
Unique NamemRNA_L-elsbetiae_contig1139.1215.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: D8LMK5_ECTSI (Similar to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 9.860e-111
Identity = 176/215 (81.86%), Postives = 191/215 (88.84%), Query Frame = 2 
Query:    8 MTSMPVTS-SEGDKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTV-DGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVWKG 646
            M S P TS S GD  FPVLGLLPKQET+AW+FLK  P  DGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTV+K  +V+T  DGVREIKGLSGRT+RLN KW+NP+GEWRVG+KRAY LFPK+LV RVK ERRK+WDKKHLAAEAAVARE+SAW+  HP PNPT+KKF+ DLEARAAHLEE KASLDDPGPLHDCVVWKG
Sbjct:    1 MASTPATSNSGGDGTFPVLGLLPKQETEAWEFLKANPQLDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVLKGGSVTTAADGVREIKGLSGRTLRLNPKWTNPSGEWRVGIKRAYGLFPKLLVTRVKAERRKDWDKKHLAAEAAVAREISAWKATHPNPNPTDKKFLLDLEARAAHLEESKASLDDPGPLHDCVVWKG 215
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A836CLL6_9STRA (Subtilase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL6_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.020e-67
Identity = 117/203 (57.64%), Postives = 145/203 (71.43%), Query Frame = 2 
Query:   41 DKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWRTAHPAP--NPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVWK 643
            D  FP  G+LP+QETQA  F++  P++DGRG  VAI DTGVDP A GLQ   DG PKV+D++DC GSGDVDT+T +     +  DGVREIKGLSGR +RLN+ W NP G WRVGLKRA+EL+P+ L   VK ERRK +D    AAEAA+ REL+ W+ AH AP  +  +K+ +QDLE R AHL++     DDPGP+ DCVVWK
Sbjct:    3 DAAFPTQGILPRQETQAEAFVQANPEFDGRGTVVAILDTGVDPGAIGLQTTSDGRPKVIDVIDCGGSGDVDTTTTVTG---AETDGVREIKGLSGRALRLNAAWENPGGAWRVGLKRAFELYPRGLTAYVKGERRKRFDAAQRAAEAALRRELAEWKAAHAAPAASAADKEALQDLEDRLAHLQQAAKDYDDPGPILDCVVWK 202
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A7R9V402_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V402_9CHLO)

HSP 1 Score: 199 bits (505), Expect = 1.120e-59
Identity = 101/193 (52.33%), Postives = 131/193 (67.88%), Query Frame = 2 
Query:   62 GLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            G +PK+E  A  FLK+ P YDGRGV +AI DTGVDP A+GLQV  +G PK+LD++DCTGSGDVDTSTV+K D     DG   I   SGR+++LN  W NPTG+W VG K  Y+LF + LV R++EERR++WD++H AA AA A +++A           +KK   +LEAR A+L+      +D GPL DCVVW
Sbjct:  119 GAMPKEEIGALRFLKKHPRYDGRGVTIAILDTGVDPGAAGLQVTSEGKPKILDVIDCTGSGDVDTSTVVKADG----DGC--IVSPSGRSLKLNPAWKNPTGDWHVGCKHVYQLFSRTLVTRMREERRRQWDERHRAAGAAAAADVAAL---DGRAREADKKLRAELEARVAYLKAASKEYEDHGPLIDCVVW 302
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A382GR40_9ZZZZ (Peptidase_S8 domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382GR40_9ZZZZ)

HSP 1 Score: 199 bits (506), Expect = 9.270e-59
Identity = 105/213 (49.30%), Postives = 135/213 (63.38%), Query Frame = 2 
Query:    2 LSMTSMPVTSSEGDKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            L     P  +    K FP+ G+LPK ET A D+LKE P YDGRG+ VAIFDTGVDP A GLQ   DG PK++D+VD +GSGDVDTS   +       DG   + GL+GRT++L   W NP G+WRVG+K AYELFP  LV R+K ER+KEWDK+     A +   L+ +  A+  P   +KK   +L+AR   LE  +   DDPGP++DCVV+
Sbjct:   14 LGQAQPPAAAPPSAKPFPLQGILPKAETGALDYLKEHPTYDGRGITVAIFDTGVDPGAPGLQETSDGRPKIVDVVDGSGSGDVDTSAERE-----AKDGT--LTGLTGRTLKLGGDWQNPGGKWRVGIKAAYELFPGSLVSRLKRERKKEWDKQQRERMAGLQANLADFDEANSTPKGDKKKERGELQARIDLLEALQKDYDDPGPVYDCVVF 219
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A1Y2GAH1_9FUNG (Tripeptidyl-peptidase II n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAH1_9FUNG)

HSP 1 Score: 207 bits (528), Expect = 4.120e-58
Identity = 100/198 (50.51%), Postives = 139/198 (70.20%), Query Frame = 2 
Query:   47 DFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            +FP+ G+LPK+ET+A  FLK++P+YDGR   +AI DTGVDP A+GLQV  DG PK++DIVDC+GSGDV T+T++KP   +  DGV  I GL+GR +RL+  W NPTGE+R+G+KRA+ LFP  L  R+K+ER  E+ KKH    A +  EL+A+  +HP     E++   D  AR   L++   +  DPGP++DCVV+
Sbjct:   12 EFPLQGILPKEETEAASFLKKYPNYDGRNTIIAILDTGVDPGAAGLQVTSDGKPKIIDIVDCSGSGDVPTTTIVKP---TEEDGVPVITGLTGRKLRLSKDWKNPTGEYRIGIKRAFNLFPVELTDRIKKERLAEFQKKHFLLVAKIQDELAAFLESHPTLTEEEQRTKADFNARLEALKDSLKNYSDPGPVYDCVVF 206
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A4D9D6J9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6J9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 4.200e-58
Identity = 108/216 (50.00%), Postives = 144/216 (66.67%), Query Frame = 2 
Query:   26 TSSEGDKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIK---------PDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWR--TAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            TS+  D  FP  GLLPK+ET A  FL ++P +DGRGV VAI DTGVDP  +GLQV  DG PK++D++DC+GSGDVDTST ++         PD+++ ++    IKGL+GRT+ LN+ W NP+G+W +G+KRA EL+P  L  RV +E +KEW  KH   EA + RE++A++  T   A    E + M D EARA+ LEE     DD GPL+D VVW
Sbjct:    5 TSTNNDLTFPDAGLLPKEETGAAAFLSQYPHFDGRGVVVAILDTGVDPGGAGLQVTSDGKPKIIDMIDCSGSGDVDTSTTVEALPPAESGSPDSIAKLN----IKGLTGRTLHLNTAWPNPSGKWHIGVKRAVELYPNGLKSRVAKEMKKEWTLKHREVEAGLQREVTAFKASTGTGAMTRDEMEDMADREARASQLEEIAKGYDDAGPLYDVVVW 216
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BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: W7U693_9STRA (Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U693_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.550e-58
Identity = 107/216 (49.54%), Postives = 142/216 (65.74%), Query Frame = 2 
Query:   26 TSSEGDKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIK---------PDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWR--TAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            TS+  D  FP  GLLPK+ET A  FL ++P +DGRGV VAI DTGVDP  +GLQV  DG PK++D++DC+GSGDVDTST ++         PD+ + ++    IKGL+GRT+ LN  W NP+G+W +G+KRA EL+P  L  RV +E +KEW  KH   EA + RE++A++  T   A    E + M D EARA+ LEE     +D GPL+D VVW
Sbjct:    5 TSTNNDLTFPDAGLLPKEETGAAAFLSQYPHFDGRGVVVAILDTGVDPGGAGLQVTSDGKPKIIDMIDCSGSGDVDTSTTVEALPPAENGSPDSGAKLN----IKGLTGRTLHLNMAWPNPSGKWHIGVKRAVELYPNGLKSRVAKEMKKEWTLKHREVEAGLQREVAAFKASTGTGAMTRDEIEDMADREARASQLEEIAKGYEDAGPLYDVVVW 216
[Close]
BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A197JRB6_9FUNG (Tripeptidyl-peptidase II n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JRB6_9FUNG)

HSP 1 Score: 206 bits (525), Expect = 1.040e-57
Identity = 99/198 (50.00%), Postives = 138/198 (69.70%), Query Frame = 2 
Query:   47 DFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            +FP+ G+LPK+ET+A  +LK++P+YDGR   +AI DTGVDP A+GLQV  DG PK++DIVDC+GSGD+ T+T++KP      DG+  I GL+GR + LN  W NP+GE+R+G+KRAY+LFP  L  R+KEER  E+ KKH    A V  EL+A+  AH      +++   DL AR   L++   +  DPGP++DCVV+
Sbjct:   12 EFPLQGILPKEETEAASYLKKYPNYDGRKTIIAILDTGVDPGAAGLQVTSDGKPKIVDIVDCSGSGDIPTTTIVKP--TENDDGIPVITGLTGRKLHLNKNWKNPSGEYRIGIKRAYDLFPSDLADRIKEERLAEFQKKHFLLVAKVQEELAAFIKAHTTLTEEDQRTKADLNARLDVLKDSLKNFSDPGPVYDCVVF 207
[Close]
BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: H3DMN7_TETNG (Peptidase_S8 domain-containing protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3DMN7_TETNG)

HSP 1 Score: 192 bits (488), Expect = 4.630e-57
Identity = 94/201 (46.77%), Postives = 138/201 (68.66%), Query Frame = 2 
Query:   41 DKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERR-KEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            ++ FP  GLLPK+ET A  +L  FP+YDGRGV +AI DTGVDP A G+QV  +G PK++DI+D TGSGDV+ +T+ +P      DG   I GLSGRT+++   W NP+G++R+G+K  YE FPK L +R+++ER+ K WD +H AA A V+R+   +  +HP P+  EK   +D+++++  L   +    DPGP++DCV+W
Sbjct:    7 EEPFPFHGLLPKKETGATSYLTRFPEYDGRGVLIAILDTGVDPGAPGMQVTTEGKPKIIDIIDTTGSGDVNMTTIAEPK-----DGT--ITGLSGRTLKIPPAWVNPSGKYRIGVKNGYEFFPKALKERIQKERKEKMWDPQHRAAVAEVSRKTEEFDLSHPTPSQMEKLQKEDIQSQSELLALLEKKYSDPGPVYDCVLW 200
[Close]
BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Match: A0A3B3CAN6_ORYME (Tripeptidyl peptidase 2 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3CAN6_ORYME)

HSP 1 Score: 191 bits (486), Expect = 7.820e-57
Identity = 96/207 (46.38%), Postives = 138/207 (66.67%), Query Frame = 2 
Query:   23 VTSSEGDKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDTGVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVREIKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERR-KEWDKKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLDDPGPLHDCVVW 640
            + +   ++ FP  GLLPK+ET A   L  FP+YDGRGV +AI DTGVDP A G+QV  +G PK++DI+D TGSGDV+ +TV +P      DG   I GLSGR +++   W NPTG++R+G+K  YE FPK L +R+++ER+ K WD  H AA A V R+L  +  +HP P+ +EK   ++L++++  L   +    DPGP++DCV+W
Sbjct:    1 MAAHSSEEPFPFHGLLPKKETGAASHLSRFPEYDGRGVLIAILDTGVDPGAPGMQVTTEGKPKIVDIIDTTGSGDVNMTTVAEPK-----DGT--ITGLSGRILKIPPAWVNPTGKFRIGVKNGYEFFPKALKERIQKERKEKMWDPAHRAALAEVCRKLDEFDLSHPTPSQSEKLQKEELQSQSELLASLEKKYSDPGPVYDCVLW 200
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1139.1215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMK5_ECTSI9.860e-11181.86Similar to tripeptidylpeptidase II n=2 Tax=Ectocar... [more]
A0A836CLL6_9STRA3.020e-6757.64Subtilase family-domain-containing protein n=1 Tax... [more]
A0A7R9V402_9CHLO1.120e-5952.33Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A382GR40_9ZZZZ9.270e-5949.30Peptidase_S8 domain-containing protein (Fragment) ... [more]
A0A1Y2GAH1_9FUNG4.120e-5850.51Tripeptidyl-peptidase II n=1 Tax=Lobosporangium tr... [more]
A0A4D9D6J9_9STRA4.200e-5850.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U693_9STRA4.550e-5849.54Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
A0A197JRB6_9FUNG1.040e-5750.00Tripeptidyl-peptidase II n=1 Tax=Linnemannia elong... [more]
H3DMN7_TETNG4.630e-5746.77Peptidase_S8 domain-containing protein n=1 Tax=Tet... [more]
A0A3B3CAN6_ORYME7.820e-5746.38Tripeptidyl peptidase 2 n=1 Tax=Oryzias melastigma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1139contigL-elsbetiae_contig1139:5472..12643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.8
Seed ortholog evalue9.3e-97
Seed eggNOG ortholog2880.D8LMK5
Preferred nameTPP2
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008240,GO:0009507,GO:0009536,GO:0009987,GO:0010883,GO:0010884,GO:0016020,GO:0016043,GO:0016567,GO:0016604,GO:0016787,GO:0017171,GO:0019538,GO:0022607,GO:0022626,GO:0031090,GO:0031974,GO:0031981,GO:0032446,GO:0032879,GO:0032991,GO:0033218,GO:0036211,GO:0042277,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044464,GO:0048518,GO:0050789,GO:0051259,GO:0051260,GO:0065003,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1905952,GO:1905954,GO:1990904
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
EC3.4.14.10
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03110
Exons5
Model size667
Cds size660
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1139.1215.1prot_L-elsbetiae_contig1139.1215.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1139 5472..12636 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815346.8017178-CDS-L-elsbetiae_contig1139:5471..55821622815346.8017178-CDS-L-elsbetiae_contig1139:5471..5582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 5472..5582 -
1691682852.465482-CDS-L-elsbetiae_contig1139:5471..55821691682852.465482-CDS-L-elsbetiae_contig1139:5471..5582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 5472..5582 -
1622815346.8157773-CDS-L-elsbetiae_contig1139:7103..71811622815346.8157773-CDS-L-elsbetiae_contig1139:7103..7181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 7104..7181 -
1691682852.4785676-CDS-L-elsbetiae_contig1139:7103..71811691682852.4785676-CDS-L-elsbetiae_contig1139:7103..7181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 7104..7181 -
1622815346.8271296-CDS-L-elsbetiae_contig1139:8253..84041622815346.8271296-CDS-L-elsbetiae_contig1139:8253..8404Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 8254..8404 -
1691682852.49002-CDS-L-elsbetiae_contig1139:8253..84041691682852.49002-CDS-L-elsbetiae_contig1139:8253..8404Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 8254..8404 -
1622815346.8372762-CDS-L-elsbetiae_contig1139:9174..93141622815346.8372762-CDS-L-elsbetiae_contig1139:9174..9314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 9175..9314 -
1691682852.50386-CDS-L-elsbetiae_contig1139:9174..93141691682852.50386-CDS-L-elsbetiae_contig1139:9174..9314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 9175..9314 -
1622815346.8481781-CDS-L-elsbetiae_contig1139:12456..126361622815346.8481781-CDS-L-elsbetiae_contig1139:12456..12636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 12457..12636 -
1691682852.5157745-CDS-L-elsbetiae_contig1139:12456..126361691682852.5157745-CDS-L-elsbetiae_contig1139:12456..12636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1139 12457..12636 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815346.8571692-UTR-L-elsbetiae_contig1139:12636..126431622815346.8571692-UTR-L-elsbetiae_contig1139:12636..12643Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1139 12637..12643 -
1691682852.532061-UTR-L-elsbetiae_contig1139:12636..126431691682852.532061-UTR-L-elsbetiae_contig1139:12636..12643Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1139 12637..12643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1139.1215.1

>prot_L-elsbetiae_contig1139.1215.1 ID=prot_L-elsbetiae_contig1139.1215.1|Name=mRNA_L-elsbetiae_contig1139.1215.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MTSMPVTSSEGDKDFPVLGLLPKQETQAWDFLKEFPDYDGRGVKVAIFDT
GVDPAASGLQVCPDGSPKVLDIVDCTGSGDVDTSTVIKPDAVSTVDGVRE
IKGLSGRTIRLNSKWSNPTGEWRVGLKRAYELFPKMLVKRVKEERRKEWD
KKHLAAEAAVARELSAWRTAHPAPNPTEKKFMQDLEARAAHLEECKASLD
DPGPLHDCVVWKGDGGAVDG
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mRNA from alignment at L-elsbetiae_contig1139:5472..12643-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1139.1215.1 ID=mRNA_L-elsbetiae_contig1139.1215.1|Name=mRNA_L-elsbetiae_contig1139.1215.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7172bp|location=Sequence derived from alignment at L-elsbetiae_contig1139:5472..12643- (Laminarionema elsbetiae ELsaHSoW15)
GCTCTCCATGACGTCGATGCCTGTGACTAGCAGTGAGGGTGATAAGGATT
TCCCAGTGTTGGGCCTGTTGCCGAAGCAGGAGACTCAAGCATGGGACTTC
CTCAAGGAGTTTCCTGACTACGACGGGCGCGGAGTGAAGGTGGCCATCTT
CGACACCGGCGTTGATCCCGCCGCGAGTGGGCTGCAGGTGCGTTGTGTTT
GGCACGCGCTGTGTTGGTATGTTGTGGTTTGCTGGGCTGTGCACTTGTAT
AGATCGTGTGTGGAAGCGGTCAACGGCGGCTGCAGGGGATGATGTGTGTA
TGTATCGTCTAAATAGCTAAATAGGGGGTCTGGCTCACACACCAAGGGTT
CCATATGTGTGCTGGTCCATCTCTTTTTCGCAAAGGCTCGTCGACATGTA
CATATACAAATTAAACCTGCTTGCTCAATCGAGTGGGGCTGCACCCAAGC
CGAATAAGTAGGTTCGCGTTACGCAAGCCAAAGCAGGTTTTATGGTTTTA
TTGCTGTACATTAGTCTGGAGATCCGCGTACTTGAGCGCTCCGTGCGGGT
CTTCCCCTTTTTTGAGCAAAGGGTTTGTCGACTTTCCCTACCTGCGTAAG
GGCGCGTCTTAACGGTTGCAGATGCGAACGAATTGGCAATTGGAATTGGA
ATTGGAATTGGGTCTCGAATGTGGGGATAATCAGCACCCGCGCAAGGAGC
GAAATCGATACATACCACGGATATCCCCTGGGGGCCGCCGAGTGACAAGT
TGATTGAAGGTTCACCGGCAGCTCATGTGCAACAGGGTTGCTACATATTT
AGATTGAAAAATACTGAAAAATACCACAAGAAGTCTGAACAAGAGTTGCT
CATAGTCCAAACCTCATTCTCAAACGTCAGCCAGAACTGATGTTTAGGAT
GTCGAGATGCAACGACACCACCGCCGTTGGCATCATTTTTTCGAAAACAG
CTGTGCACAACAGAGAGCCTGCATATTATTTTTTTTTCACGCGCACAGGC
CTGTCGCAATACAGCTACATGTATTTATCCCCAAACTGCGGATACCAGGC
GATCGGTATGGCAGCGTGGAGACGTGAAAACGTGGGCCCGCATGCACGGT
TCATGGGTCAATTCAATTCGTTTCGAGCGACTGCCAAAAATCAACCCTCC
GGAGGGTTGATTTTCTGTGAATTAAATGCTATTATAGCTCCGCGTAATAA
GTGTAGTGACATACGAGCCGTACACCAGCAGTAGTTACATAGTTAACCTG
CGATGCCAAAGGCAGGGAGGCGTGCAACACCCTGAGTTATCTTCCCCCTC
TGTCTGTCTCTCTCTCTATCGCTCGCACATCCATACACACACCAGTTTTG
ACTCCTCCCTTGGTGAGCAAAAAGTTCCGAACAGATGCACGGATGTCCAG
GGAGTAGAGATGAGAGAGGGGATTTTTTCGCGCGTACACACGCACCTCCT
GTTGCCTACCTGCTTATTCTAGACGGCACTGCGCACGTGCTTCGACAGCC
CTATCCATGCTCTTTGTCCGGAGATGGTTTATTGCCCCTCGCCGGCCGAC
AAAAGAAAACTGTTGCCCAGGAACACGCATGCCAGGGACCGTCAAATTTG
AAGAAAATAAAAAAACTTGGGGAGCCTCGCTGCTGAGCTAAACGCTCTGA
CCGCGATTGTGAAGTCAATTCGTCGAGAGATATATACTACCCTAAAGAGC
TCCAAGCAAATAGCGTGAGTAGAGCTATCGACTCACCTGCTCAGTTTCGT
CTGGAAACACTGAGAGGCAGACACATGAATGTTTTGTCTCCACTCCGTCC
CTTCCCACGCACGCACATCACGCGCGCGCCCACACTGGAATTATGTGCCG
TTCTGTGCCGCCAGCACCATATCCCTACATGACCAGTGAGCCCACGCTGC
CCTTCCCCCGCCATTGTTTCATTATTCCTCCTTACTCCCAGCGTTGGTGC
TGTGTGTGTTACTACCTCTCTTTCGTTGTTCCAATGCGGGTGCCGTGTGT
GCGATCTCCCACTTTCGTGTCCCTTCTTTTGTGAACTCCCGGGGATGCTT
CGTCCTGTCCCAGGATCTCCGACCGAAATCTCTCGACAAACACTTGTGTG
GCACAGCCATCTCTGTTCGAGGCACCACGACACCGGCGTGACGAACAGAG
CCCTATTTTCCCTCCCTCTCAAAAGGCAACAGATCGTCAATCGGTGCTCT
AAGATCTTGTTCTGATCAACAAGGAGGGTCATTTTAGCCGCCCGGTAGTC
ACGTTATGTACAGGGGCGCTGATTCGCTATCGGAGGAACTTCTGGCCGAT
ATTTAGAGCGTTTTTTTTTCTTTGTTTCTCCTTCCCGAGATGAAGGGGAA
AAAATATCGCGGCTTCGCGGCTCTTTATGAAGGGTTCCGCGGATGCGACC
CAATGACGCGGCGCTATGTAACCCCACAAGGGCAAACAGCAAACAAGGAT
CTCACTGGAGAGACGTTCATATGCATGTACTTCTGTGGTCGAGCCAGTTT
GAACGGCGTCATAGGTTGTCACTCGGCATTGCAGCGCTCTCTTACATGTT
GTCGAGCGATCGAGCTGTCGAGATCGACCACTCGGGGCGTGGTATGCCAC
TCACGGGCGACCGCTCATGTACTCCCTCCCTGATGTACCCATGAAGTATG
TGTGTACATAGACATGGCGGCCAAAGAACGAGAGAGGGGGCAGAGACAGG
GACCGGCCACCCCTCTAGAGGATGGCCCAGGGTGGGCTTAGGCGGGGGTC
CTATTTTCCGCAGGCGGCGGTCCGCAGCAGCTGCTTTCATCACCCGCCGT
CTCAAGCAGCCCCAAAGACAATTGCTGACGTTTGTCATCGAAGCTTAGCC
AAATGTGCAACATTTTCAACCCCCCCCCTCTCCGTGCGTTGATCCTATGT
TATGATGATATGTAGCCCGTCGCTTGGACACGATCGGCATATAGTAGGTT
GTGTCTTACTCCCGTTTCTCCGGTTGCTATGTACCTTGTCTTTGTCTTTT
TGTGTTGGCTTGCCTTGTCTTTTCTTGTCGTGTCTTGTCTTGTACTGTCT
TATCCTGTCTTACCTTGTCTTGCCTTGTCTTATCTTTTTGTGTTGGCTTG
CCTTGTCTTTCTCATCTGAACTTGACTGATCTTGTCTTGTATTGTCTTTT
CTTGTCTTGTCTTATCTTATATTGTCTTGTCCTGTCTTACCTTGCCTTAT
CTTCTTGTGTTGGCTTGCCTTGTCTTTCCTTGTCCTGTCTTGTCTTATAT
TGCCTTATTTTTTGTCTTGTCTCATATTGTCTTACATTGTCTTATCCTGT
CTTGCCTTATCTTGTCTTATCTTGCCTAGGTCTGCCCGGACGGCAGCCCC
AAGGTGCTCGACATCGTTGACTGCACGGGGTCGGGCGATGTGGACACCTC
CACCGTGATCAAGCCCGATGCCGTCAGCACAGTCGACGGCGTCCGTGAGA
TCAAGGGGCTCTCCGGAAGGTGCGATGGTGCTGCTCGTGTATACCTACTA
TTTAGACATGTGCTTAGCAACATGCGTAGATAGGAAAACAGGGGTACCGT
GAATCGACGCGATCAGACGCGAGGAAATGGGACTCATGTCAGTAGGCGTG
ATGGAACGCGAGAAAGAAAAAGAGAGCGGTTGACTCTGTGGCCGTGCTTT
GAATATCGCAACGCACAACTCCCTGCAACACCACCACACTTGGTGGCAAC
CGCAACACACGCGGAGACTTTATTCGGCGTATCTGGTAGTTCCTTTGACA
CCCGGCGCACGATGCCGGCGCCGCGGGCACCGGGCAAGGCGCTCGCGATT
CACGCTACCCCCTTTCGAGTCGTTGAGTGGTTGGTATGTAGGAGGATCTC
TCACTCCGCTGGGTACAGACGTTCAAAGGCCAATCAAACCCGCCGTACCA
AGTGCACTTTTTTCGTTGTGGAGGTGGTGGGAGGTGGTGGGCGGTGTTGG
TTCGGTAGTTGCTTCATTGTTTGGACTGTTTGTGTGGCTGGTGTCGCTGG
TGGTGGTGTCGGCCCTGCTTTATGCCGGTGTTGTTTGTTCTGCCGCTGTT
GGAGTGCTTTCTTCGTTGCTGCTGCTGGAGTTCTCAACTCCGCTGGTGCT
GCTGATGTCGCAATAGCCGATGTCACGGAGGCGGGTCGTGTCTCGTATCC
TTGATCTTGGACCTTTAATCTCTTATCTGCATCTGCGATCCGTGATGCGT
CTGTCTTTCGTGGTCAATGTCTGCGTTCGGGCTTGGAAGGACCATCCGCT
TGAACTCCAAGTGGAGCAACCCCACCGGAGAGTGGCGCGTGGGCCTGAAG
CGCGCCTACGAGCTGTTCCCGAAGATGCTGGTGAAGCGGGTCAAGGAGGA
GCGGCGCAAGGAATGGGACAAGAAACACCTCGCCGCCGAGGTGTGGTACT
TTGCAATACATGTCGCCGATTTGAAACCTGTCTTTTGTGCTGTTGAGATG
CTGCGCAGGTGTGGTGTGTGGCTGAGCTGGAGCCTGTCTGCGCGCTTTAG
ATGTTGCGTAAGTCTGATAGACGAAATCGAAACCCTCCCCTCATACGTAA
GACAGCACCCCCCCACACACACACAGAATCCAACACCGGGTGGTATATGT
TTGTATGGTCGAACGAGAGACCGAAAACAAAAGTTCCCGCTCCTATTATT
TGTGGTGTTTTCCTCCGTGGCCGGATCAACACATCACTGTATGTAATATA
TGGAGCTGTGACCTCCCGCCTCTAATAATGGGAGATTCTTCCGTCGATTT
CCTGATTCATTTTCATAAGTAGGTTCTCAAAGATCAAGCACGCCCCACCT
GATATTAACTCTTTTCAAGCCAAGTGTGTTGATTGTTTATCACCGGGGTG
TGTTATTTTCCGCCGTACACGGTAGGTAAGACGAAATCGAGGTCCCTCCG
CTCCGCCCGTGCCGCAATAGTGAATCATGAGTGATCTGTCTCCCTCTTTC
GAGTTTGCTGATCGGACAGGGTTGTCGTGAAATCGAACAACTATCGAAGT
GTTTTTTTTCGTCCCTACTATTGTAGTCTCTTACAAGAAGTATTTGCTTT
GCCCCATTTTTCTAACCCCCCGCCCAACCCATATGGCTTTTAATCAAAGG
AGCAGTGGTGACTGAACGGATTGTTGCGCTAGTACCTGCTGCTGCTGTGT
TGTAATGATATTTTGTCATGTACTGACCCAGGAAAAGAGGAAGTGCGAGT
GCCGGTCACGATGAAAGTGATCTTGGACGTGATGATGACTGTGATGACGA
TGATTGTGATGGTGATCTTGGACGTGATGATGATGATGGTGATGATGACT
GTGATGACGATGATGGTGACGGTTGTGGTGATGATGATGATGATGATGGT
GATGGTTGTGGTGGTGATGATGATGATGATGATTGTGATGACGATGATTG
TGATGACGATGATGGTGATGGTGATGATGATGATTGTGATGGTGATGATC
GATCGGTCTCAGGCGGCCGTTGCTCGGGAGCTGTCTGCGTGGAGGACGGC
GCACCCCGCCCCCAACCCCACCGAGAAGAAGTTTATGCAGGTAGGTCGGT
CCGTGTTTGCTGCTATGCACTAAGTAGTCTCGGTGTGCTTGTTCCAGAGA
AGCGGTGTGCAGCAGCAGCGAAGCATACAGATCCTTCCGAAGGGATAACA
TGCCGCTCGTTTTCTTCTCCCGATTGTGGTGGTCTCTCTTGGCGATGTGT
GGTGCGGCTGTGGAGTAACAGCCGTGTGGGGCCAGCACTAACAGAAAGCG
CGAGCGTGCCAGTGTGTGCGTGTTAGCTTGTGGGTTGAAAATGGTTTGCT
GGTTGCTCTTCGCATGGTAGGCTATGAGGGCGAGAGAGCGGGGCTCGTTA
GCCAGGTCTACCTCTCGAAAACATATCGAGACAAAAATACCCGCTGGAAA
ATTGTTGGCCGACCTCGCAAATCTAAATCTTTGCAGGGGAGATGTTGAAT
TCTTCTCATATTTAGGTTGTTTTTTCTGCTCGCTTCGCCAAATATCACGT
CTCTGTATGAAATACCGTTTGAACCCCATATCGAGTCTTTGCTCTAGTAT
GGGTTAGGTTCCATCTTTGATTCTTTGTTTTATTTTAAAACAAAATCCAA
GAGACCCTAAGATACCAACCCGGTACGGACCGTCGAAGCCGGTCTATTCG
GCGCAATCTACTGGGTCATTTTCCTGCGGTTACGTCATGTATACTGAACC
GACACTTATAACCCGAGCAGGGCTTTCCTGTGCCAAGCTACCGACCACTC
TCGAACATTTCCTAGTCAGCGACAGCGAACAAACAAGGGTTCTTCGTGAT
TCTGTTACACGCTTTAATGCGTGCTGCACGTCGCAACTTATGTATGACGC
ATAGCCAATATCCCTGATATGTAGTCTCACCCAGCGACGGAATACTCTTG
TGCGATGCCGATTGTGACAACGACATACTTCGTGTGTAGGCTTTGGAAAG
GGCACGATAAGATCGCCGGCTTCAGTCGCACCGCACCGCACCGCACCACC
GTACTCGTACCGTACCGTACCGTACCGTACCGTACCGTACCGTACCGTAC
CGTACCGTACCGTACCGTACCGTACCGTACCGTACCGTACCGTACCGTAC
CGTACCGTACCGTACCGTACCGTACTTTGCTGTACGCTAAGCCACGCCAC
GCCACGCAACGCGCCCAAGGGTTGTATATACCCAAAACTGCTGGGCTACC
GCTACTGCAAGTCGAAGACTGGCCGCGACGAATTTGTGCTGCTACTTCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTTC
TTTGGCACTCTCAAACGACCCGATCGTGGAAAAAAGTAACGTCGTGTGTA
CAGTTGCACAGAGAGGCGTGTCTCCGTGCCTGCGTCCCTCGAGACACGCT
GCCGTTCTCGAAATGGCAGGAGATGGATGCGTTCTACTGTTGTGGGTTGG
GCTGAAGTGCGCGTGAAGCTAAATCTTTCCCCGAATCGATAGGAAACACC
CCTACCGTAACGCCTTCAGCTTTGATCTATTATCCTGCTGCCTTTCACAT
GCTTCATTCAGGACCTGGAGGCTAGGGCAGCGCACCTTGAGGAGTGCAAG
GCTAGCCTAGACGACCCGGGGCCGCTGCACGACTGCGTTGTGTGGAAGGG
AGATGGGGGTGCCGTGGACGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1139:5472..12643-

>mRNA_L-elsbetiae_contig1139.1215.1 ID=mRNA_L-elsbetiae_contig1139.1215.1|Name=mRNA_L-elsbetiae_contig1139.1215.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1320bp|location=Sequence derived from alignment at L-elsbetiae_contig1139:5472..12643- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTCGATGCCTGTGACTAGCAGTGAGGGTGATAAGGATTTCCCAGT
GTTGGGCCTGTTGCCGAAGCAGGAGACTCAAGCATGGGACTTCCTCAAGG
AGTTTCCTGACTACGACGGGCGCGGAGTGAAGGTGGCCATCTTCGACACC
GGCGTTGATCCCGCCGCGAGTGGGCTGCAGATGACGTCGATGCCTGTGAC
TAGCAGTGAGGGTGATAAGGATTTCCCAGTGTTGGGCCTGTTGCCGAAGC
AGGAGACTCAAGCATGGGACTTCCTCAAGGAGTTTCCTGACTACGACGGG
CGCGGAGTGAAGGTGGCCATCTTCGACACCGGCGTTGATCCCGCCGCGAG
TGGGCTGCAGGTCTGCCCGGACGGCAGCCCCAAGGTGCTCGACATCGTTG
ACTGCACGGGGTCGGGCGATGTGGACACCTCCACCGTGATCAAGCCCGAT
GCCGTCAGCACAGTCGACGGCGTCCGTGAGATCAAGGGGCTCTCCGGAAG
GTCTGCCCGGACGGCAGCCCCAAGGTGCTCGACATCGTTGACTGCACGGG
GTCGGGCGATGTGGACACCTCCACCGTGATCAAGCCCGATGCCGTCAGCA
CAGTCGACGGCGTCCGTGAGATCAAGGGGCTCTCCGGAAGGACCATCCGC
TTGAACTCCAAGTGGAGCAACCCCACCGGAGAGTGGCGCGTGGGCCTGAA
GCGCGCCTACGAGCTGTTCCCGAAGATGCTGGTGAAGCGGGTCAAGGAGG
AGCGGCGCAAGGAATGGGACAAGAAACACCTCGCCGCCGAGGACCATCCG
CTTGAACTCCAAGTGGAGCAACCCCACCGGAGAGTGGCGCGTGGGCCTGA
AGCGCGCCTACGAGCTGTTCCCGAAGATGCTGGTGAAGCGGGTCAAGGAG
GAGCGGCGCAAGGAATGGGACAAGAAACACCTCGCCGCCGAGGCGGCCGT
TGCTCGGGAGCTGTCTGCGTGGAGGACGGCGCACCCCGCCCCCAACCCCA
CCGAGAAGAAGTTTATGCAGGCGGCCGTTGCTCGGGAGCTGTCTGCGTGG
AGGACGGCGCACCCCGCCCCCAACCCCACCGAGAAGAAGTTTATGCAGGA
CCTGGAGGCTAGGGCAGCGCACCTTGAGGAGTGCAAGGCTAGCCTAGACG
ACCCGGGGCCGCTGCACGACTGCGTTGTGTGGAAGGGAGATGGGGGTGCC
GTGGACGGGGACCTGGAGGCTAGGGCAGCGCACCTTGAGGAGTGCAAGGC
TAGCCTAGACGACCCGGGGCCGCTGCACGACTGCGTTGTGTGGAAGGGAG
ATGGGGGTGCCGTGGACGGG
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