mRNA_L-elsbetiae_contig11381.1212.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 195 bits (496), Expect = 7.370e-51 Identity = 129/256 (50.39%), Postives = 162/256 (63.28%), Query Frame = 3
Query: 1569 SGETSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQ-QGGNPASVGGYVNAQDSFGAAPLMHAVGGCSPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKK--VREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPPITNAAEEKRKDKITSESLRMALPKL--RRRARRRGVVLAPLLRFSSR 2321
SG T LPLD AA GH VV EL++Q+GI+ CGG SGGV AL AA+ ++++ M +L AGVVDTG AL AA +GGE P+KFLLEQ + YVN +D G PL+ + PRV VR L++AGADTTS V + G D TPL T+N +R K V A+ EQL+ L+ IRRLLL+VEAVHA+SWLW S + IT AA + D+ T+ S + LP L RRRAR R V LA LLR+SS+
Sbjct: 183 SGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRV--VRLLVEAGADTTSPVAVRNQLGGD-DVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA-RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 191 bits (484), Expect = 3.700e-49 Identity = 126/260 (48.46%), Postives = 153/260 (58.85%), Query Frame = 3
Query: 1584 LPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVNA-QDSFGAAPLMHAVG-----GCSPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPPIT-----NAAEEKRKDKITSESLRMALPKLRRRARRRGVVLAPLLRFSSRSAG 2330
LPLDTAA G + VVLEL+Q+ GI CGG +GGV AL AA H+D M L AGVVDTG AL KA SFG VKFLL+QQ G P+ YV+ +D G PL+ + CSP+V VR L+DAGADTTS V+ T G + + TPL+ +LR K K +E L L+ IRRLLL+VEAVHA SWLW + VP + AA E T+ LR LP LRRRAR RG V A L R++ + G
Sbjct: 185 LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKV--VRLLVDAGADTTSIVRFTIQPGT-LPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKLDG 441
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 192 bits (488), Expect = 6.360e-49 Identity = 124/253 (49.01%), Postives = 158/253 (62.45%), Query Frame = 3
Query: 1578 TSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQG--GNPASVGGYVNAQDSFGAAPLMHAVGGC-SPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVRE-KDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPPITNAAEEKRKDKITSESLRMALPKLRRRARRRGVVLAPLLRFSSRS 2324
T++PLD AA GH VV EL+Q+LGIE C S G AL +AA QH+D MA+L AGVVDTG AL AA G E VKFLL + G G Y+NA+D G PL+ GC S R+VR L+DAGADTTS VQ + G V F TPLA+T LR+K V + K AT+E L L+ I RLLL+V+AVHA+SWLW S P I A E + + + L++ LP L+RR +RR ++A LLR+S ++
Sbjct: 278 TTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPA--LKLMLPILKRRTKRRCGLVATLLRYSVKT 527
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 184 bits (467), Expect = 5.080e-47 Identity = 123/259 (47.49%), Postives = 150/259 (57.92%), Query Frame = 3
Query: 1569 SGETSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLMHAV--GGCSPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLW--HSAVPPITNAAEEKRKDKITSES---LRMALPKLRRRARRRGVVLAPLLRFSSRS 2324
SG T +PLD AA GH+ V ELVQ+ GI C G S GVDALG AA QH+D MA+L AGVVDTG AL G E +KFLLEQ+G A +D G PL+ AV G CSPRV VR L+DAGAD T AV+ D GR + TPL L +K V E AT +QL NL+ RRLLLQVE VHA SWLW H+ P AA K++ + S + L+ LP + RR+ RRG L + R + ++
Sbjct: 178 SGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRV--VRLLVDAGADATLAVRVPDGFGRSTKY--TPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCP----AAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKKA 428
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 174 bits (442), Expect = 8.340e-44 Identity = 118/247 (47.77%), Postives = 139/247 (56.28%), Query Frame = 3
Query: 1569 SGETSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLMHAVGGC-SPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPP---ITNAAEEKRKDKITSESLRMALPKLRRRARRRGVVL 2294
SG T +PLD A GH VV EL QLG+ CGGVSGGV++L A Q VD M +L GVVDTG AL AA E VKFLL+ Q G A YVN D FG PL+ + C S R+ R LIDA ADT S V T SG+ TPL + +SLRQ KV K+ATEEQL +LK I RLL QV+AVHA+SWLW S+ AA + K I L+ LR +RGVV+
Sbjct: 167 SGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTK-SGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 173 bits (439), Expect = 3.530e-43 Identity = 115/246 (46.75%), Postives = 138/246 (56.10%), Query Frame = 3
Query: 1611 GHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLMHAVGGC-SPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPPI---TNAAEEKRKDKITSESLRMALPKLRRRARRRGVVLAPLLRFSSRSAGG 2333
GH VV EL+QQLG+ CGGVS GV++L AA Q+VD M +L GVVDTG AL AA + E VKFLL+ Q G YVN D FG PL+ + C S R+ R LID GADT S V T SG TPL + SLRQ KV K+ATEEQL +LK I RLL Q+EAVHA+SWLW S+ PI AA + K +L+ LR +RGVVL + R + G
Sbjct: 191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTR-SGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEELVRG 432
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 171 bits (434), Expect = 2.130e-42 Identity = 115/252 (45.63%), Postives = 150/252 (59.52%), Query Frame = 3
Query: 1575 ETSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASV-GGYVNAQDSFGAAPLMHAVGGCSPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPPITNAAEEK--RKDKITSESLRMALPKLRRRARRRGVVLAPLLRFSSR 2321
E LPLD AA GH VV EL++Q+GI+ CGG SGG +AL AA +D MA+L AGVVDTG AL AA +GGE P+KFLLEQ G ++ Y+N + G L+ + C PRV V+ L++AGADTTS V + G DF TPL T+ L + K T E+ N L+ IRRLLL+ EAVHA+SWLW S P IT+A + R ++ + + + RR R R +LA LLR+SS+
Sbjct: 185 ERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRV--VQLLVEAGADTTSPVLICNQPGED-DFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 170 bits (430), Expect = 4.010e-42 Identity = 116/257 (45.14%), Postives = 152/257 (59.14%), Query Frame = 3
Query: 1578 TSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLMHAVGGC-----SPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPP----ITNAAEEKRKDKITSESLRMALPKLRRRARRRGVVLAPLLRFSSR 2321
T LPLD+AA G+++V+ EL+Q++GIE CGG S G AL A G+ V MA+L AGVVDTG AL +A G E VK+LL+ + G YVN +D G PL+ ++ C S RV R L++AGADTT+ ++ T++ G V F TPL T++ L+ KKV ++++L L+GIRRLLLQVEAVHA SWLW S+ NAAE + L LP LRRRARR GVV L R +
Sbjct: 169 TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP-GAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMG-VVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.010e-40 Identity = 113/267 (42.32%), Postives = 157/267 (58.80%), Query Frame = 3
Query: 1545 LLGRK-LQQSGETSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAGVVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLMHAVGGC--SPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHS-AVPPITNAAEEKR---KDKITSES-LRMALPKLRRRARRRGVVLAPLLRFSSR 2321
LLGR G LPLD A H VV +L+QQLGI+ CGG S G DA WA + Q D + +LA G +DTG L AA FG E VK LL+QQ G YVN + G P++ +G S RV+R +DAGADT S V+ T+ G Q+ F GTPLAYT LR ++ R D+T+ + +L+ +RR+LLQ+EA+ A+SW W S A+ I A ++ R K ++T ++ L + LP+ RR+AR R V++ + R+S +
Sbjct: 334 LLGRMDTYLRGRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQL-FRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLPR-RRKARARRVLVMAMSRYSRK 598
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 164 bits (414), Expect = 6.720e-40 Identity = 116/261 (44.44%), Postives = 154/261 (59.00%), Query Frame = 3
Query: 1572 GETSLPLDTAASFGHIVVVLELVQQLGIEDCGGVSGGVDALGWAARGQHVDTMAVLAGAG-VVDTGTALCKAASFGGEPPVKFLLEQQGGNPASVGGYVNA-QDSFGAAPLMHAVGG-----CSPRVRVVRRLIDAGADTTSAVQSTDTSGRQVDFIGTPLAYTINSLRQKKVREKDATEEQLNNLKGIRRLLLQVEAVHAMSWLWHSAVPP-ITNAAEEKRKDKITSE---SLRMALPKLRRRARRRGVVLAPLLRFSSR 2321
G + +PL+ AA G+ V E+++Q+GI CGG SGGV+AL AA +H++ MAVL AG VVDTG AL AA G VKFLL ++ A YVN +D +G P+M AV CSP++ VR L+DAGA+TT AV T + R TPLA+T LR+ +V + AT+EQL LK R LL + EAVHA+SWLW S PP I AA + + + ++ LR P LRR+ RGV+L L R+S +
Sbjct: 180 GVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRR---QADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKI--VRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11381.1212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11381.1212.1 >prot_L-elsbetiae_contig11381.1212.1 ID=prot_L-elsbetiae_contig11381.1212.1|Name=mRNA_L-elsbetiae_contig11381.1212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=776bp MSGPTEQWTRGPSNELHRAARDGSIERTIASLSRRLIDINQGDPDGWTPLback to top mRNA from alignment at L-elsbetiae_contig11381:1916..6281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11381.1212.1 ID=mRNA_L-elsbetiae_contig11381.1212.1|Name=mRNA_L-elsbetiae_contig11381.1212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4366bp|location=Sequence derived from alignment at L-elsbetiae_contig11381:1916..6281+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11381:1916..6281+ >mRNA_L-elsbetiae_contig11381.1212.1 ID=mRNA_L-elsbetiae_contig11381.1212.1|Name=mRNA_L-elsbetiae_contig11381.1212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4656bp|location=Sequence derived from alignment at L-elsbetiae_contig11381:1916..6281+ (Laminarionema elsbetiae ELsaHSoW15)back to top |