mRNA_L-elsbetiae_contig11371.1208.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 1.800e-135 Identity = 198/302 (65.56%), Postives = 234/302 (77.48%), Query Frame = 1
Query: 1 VCTASDGTEESADCTGDSWQYQAADGAWKTEVRFPTNGDESDPNPVSFEEGFLNATGNGEVTVSGISASIATAVSDSFYGRAIRLNLTCNQQSPAIEEEESCVLFEIDFTNFSPNFNVNMALYRFKDPAVPGLEMPLAQPLSPGDIRLNEGNVIVELDGSDVDRGCNGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQSTWSPNLEAALQNRYIRLLIQCNHQTALEEGFVLFKVGA--LDESCEDHPDLCVSDSPYGDGEENGAYMYGFGLVWALVLSSGVVSTLMA 900
V A DGTEE+ DCTGDSW+YQAA+G WKTE+ FP + SD P+ EGF NATG+GE+TVSGI SIA AVSDS YGR I L LTCNQ+ + EE+SCVLF++DFTN+SP F+VNMAL+RF+DPAVPG+EMPLAQPLSPGDI+LNEGN +VELDGS+V GCNG+MAEY GEDGEWY WFTGSDG YNLTHVFY TDFD L+IATIQS WSPNLEAAL NRY+RLLI C++Q E+G+++FK+G DESC+DH LCV D P D + G GL A VL+ V+S L+A
Sbjct: 70 VYLADDGTEEAVDCTGDSWRYQAANGEWKTELSFPATWESSDAAPMVSFEGFFNATGDGEITVSGIPTSIAPAVSDSLYGRNIELALTCNQEDQIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKIGGQEFDESCDDHSGLCVHDGPDDDTDSGVRCETGIGL--AYVLTFVVLSLLLA 369
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: D7FPM7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM7_ECTSI) HSP 1 Score: 231 bits (588), Expect = 4.420e-70 Identity = 121/241 (50.21%), Postives = 163/241 (67.63%), Query Frame = 1
Query: 40 CTGDSWQYQAADGA-WKTEVRFPTNGDESDPNPVSFEEGFLNATGNGEVTVSGISASIATAVSDSFYGRAIRLNLTCNQQSPAIEEEESCVLFEIDFTNFSPNFNVNM---ALYRFKDPAVPGLEMPLAQPLSPGDIRLNEGNVIVELDGSDVDRGCNGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQSTWSPNLEAALQNRYIRLLIQCNHQTALEEGFVLFKVG 750
C+ DSW+Y + + T V FP + VS F A + E+ + SA A A+SDS +GR I + L+C+Q + E+SC+ F+++FTN SP + + ALYRF++PAVPG+ +PLA SPGD+ LNEGN IV++DGS D GCNGE++EY GEDGEWY +FTGSDG+ YN+THVFYAT+ DHLN+A IQ+ WSPNLE AL NR +R+ I CN+ E+G+V+FKVG
Sbjct: 78 CSVDSWRYLLDNNVTYATNVTFPDANATENATEVSVPGLF--AAESHELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQ-TVTAEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNAYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNVNEREDGYVIFKVG 315
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI) HSP 1 Score: 158 bits (400), Expect = 3.590e-40 Identity = 98/264 (37.12%), Postives = 141/264 (53.41%), Query Frame = 1
Query: 28 ESADCTGDSWQY-QAADGAWKTEVRFPTNGDESDPNPVSFEEGFLNATGNGEVTVSGISASIATAVSDSFYGRAIRLNLTCNQQSPAIEEEESCVLFEIDFTNFSPNFNVNMALYRFKDPAVPGLEMPLAQPLSPGDIRLNEGNVIVELDGSDVDRGCNGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQSTWSPNLEAALQNRYIRLLIQCNHQTALEEGFVLFKVGALDESCEDHPDLCVSDSPYGDG 816
E CTG S Q+ +G W++ F T ES + + G E+ V+ I + +A ++ + ++L LTC + + ++ SCV+FE FTN+SP+ + A YRF DPA+P ++P A P SPGD+ L N +V G+ + CNG+ AEY GEDG WY+ F SDG + L HVFY T D L ATIQ+ W PNL L+NR +RL + C + E ++ +V +C+D DLC GDG
Sbjct: 421 EERGCTGSSAQFWDPKNGEWRS--TFETIDGESHDLDMFY---MSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVD---SCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGETHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAE--YLYIRVSGESATCDDIEDLCTEVDGDGDG 673
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.520e-39 Identity = 96/260 (36.92%), Postives = 140/260 (53.85%), Query Frame = 1
Query: 40 CTGDSWQY-QAADGAWKTEVRFPTNGDESDPNPVSFEEGFLNATGNGEVTVSGISASIATAVSDSFYGRAIRLNLTCNQQSPAIEEEESCVLFEIDFTNFSPNFNVNMALYRFKDPAVPGLEMPLAQPLSPGDIRLNEGNVIVELDGSDVDRGCNGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQSTWSPNLEAALQNRYIRLLIQCNHQTALEEGFVLFKVGALDESCEDHPDLCVSDSPYGDG 816
CTG S Q+ +G W++ F T ES + + G E+ V+ I + +A ++ + ++L LTC + + ++ SCV+FE FTN+SP+ + A YRF DPA+P ++P A P SPGD+ L N +V G+ + CNG+ AEY GEDG WY+ F S+G + L HVFY T D L ATIQ+ W PNL L+NR +RL + C + E ++ +V +C+D DLC GDG
Sbjct: 364 CTGSSAQFWDPKNGEWRS--TFETIDGESHDLDMFY---MSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVD---SCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTRTGATTETYCNGDSAEYSGEDGYWYNEFVKSNGETHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAE--YLYIRVSGESATCDDIEDLCTEVDGDGDG 612
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI) HSP 1 Score: 155 bits (393), Expect = 3.920e-39 Identity = 96/260 (36.92%), Postives = 140/260 (53.85%), Query Frame = 1
Query: 28 ESADCTGDSWQY-QAADGAWKTEVRFPTNGDESDPNPVSFEEGFLNATGNGEVTVSGISASIATAVSDSFYGRAIRLNLTCNQQSPAIEEEESCVLFEIDFTNFSPNFNVNMALYRFKDPAVPGLEMPLAQPLSPGDIRLNEGNVIVELDGSDVDRGCNGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQSTWSPNLEAALQNRYIRLLIQCNHQTALEEGFVLFKVGALDESCEDHPDLCVSDSP 804
E CTG S Q+ +G W++ F T ES + + G E+ V+ I + +A ++ + ++L LTC + + ++ SCV+FE FTN+SP+ + A YRF DPA+P ++P A P SPGD+ L N +V G+ + CNG+ AEY GEDG WY+ F SDG + L HVFY T D L ATIQ+ W PNL L+NR +RL + C + E ++ +V +C+D DLC + P
Sbjct: 420 EERGCTGSSAQFWDPKNGEWRS--TFETIDGESHDLDMFY---MSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVD---SCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGDTHELKHVFYPTQRD-LYAATIQANWEPNLRGLLENRIVRLRVYCTNDERAE--YLYIRVSGESATCDDIEDLCTAVFP 668
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: A0A6H5L4X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X3_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.030e-39 Identity = 74/135 (54.81%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 499 NGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQSTWSPNLEAALQNRYIRLLIQCNHQTALEEGFVLFKVGA--LDESCEDHPDLCVSDSPYGDGEENGAYMYGFGLVWALVLSSGVVSTLM 897
+G AEY EDG WYSWFTGSDG YNLTHVF+ TDFD L+IATIQS S NLEAA NRY+RLLI C++Q E+G+++F+VG DESC+DH LCV D P GD + G G+ + L G++S L+
Sbjct: 129 SGSKAEYLREDGAWYSWFTGSDGQRYNLTHVFFTTDFDQLHIATIQSARSLNLEAASHNRYVRLLILCSNQVNHEDGYLIFQVGGQDFDESCDDHLGLCVDDDPDGDTDSGVRCETGIGIAYVLTFVVGMLSLLL 263
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Match: A0A836C858_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C858_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 5.350e-13 Identity = 64/188 (34.04%), Postives = 89/188 (47.34%), Query Frame = 1
Query: 121 SDPNPVSFEEGFLNATGNGEVTVSGISASIATAVSDSFYGRAIRLNLTCNQQSPA----IEEEESCVLFEIDFTNFSPNFNVNMAL------YRFKDPAVPGLEMPLAQPLSPG-----DIRLNEGNVIVELDGSDVDRGCNGEMAEYQGEDGEWYSWFTGSDGHLYNLTHVFYATDFDHLNIATIQS 639
+D P T G V + I+A+ A ++ + G A L+++C+ + A +SC++FE TN SP+ A YRF DP V L ++ G D LN N IV G+ CN E AEYQGEDG WY +F GSDGH N+TH+ Y D + +T+QS
Sbjct: 131 ADAVPTMSLNAQFTVTAAGAVAAAPIAAATAVSLYSALSGTATVLSMSCDAVAAAGGGAALRVDSCLMFEAVPTNESPDLVKQAATTDLNIKYRFSDPPVATLRF---NNVTDGTDKSTDTMLNADNPIVTQLGT-APAYCNDEDAEYQGEDGAWYRYFRGSDGHYVNMTHIVYV-DAAYAYSSTMQS 313 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11371.1208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11371.1208.1 >prot_L-elsbetiae_contig11371.1208.1 ID=prot_L-elsbetiae_contig11371.1208.1|Name=mRNA_L-elsbetiae_contig11371.1208.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp VCTASDGTEESADCTGDSWQYQAADGAWKTEVRFPTNGDESDPNPVSFEEback to top mRNA from alignment at L-elsbetiae_contig11371:3795..5659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11371.1208.1 ID=mRNA_L-elsbetiae_contig11371.1208.1|Name=mRNA_L-elsbetiae_contig11371.1208.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1865bp|location=Sequence derived from alignment at L-elsbetiae_contig11371:3795..5659- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11371:3795..5659- >mRNA_L-elsbetiae_contig11371.1208.1 ID=mRNA_L-elsbetiae_contig11371.1208.1|Name=mRNA_L-elsbetiae_contig11371.1208.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig11371:3795..5659- (Laminarionema elsbetiae ELsaHSoW15)back to top |