mRNA_L-elsbetiae_contig1137.1205.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1137.1205.1
Unique NamemRNA_L-elsbetiae_contig1137.1205.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: D7FYN9_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN9_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.140e-125
Identity = 192/209 (91.87%), Postives = 200/209 (95.69%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAALPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMWSRRGAS 747
            MTSIVELFPKARRLSFDLRTLLQYVE+GHASP+DAGMNLEEFGRQLDVLE LVGQERPTQREDWRRKLRELRNE  FLRDQLGRFDQGRRKV QEA+EREELLARRHAALPSSVMD+YAEEGSSLLRSRRMVGDYLQTGQASL SLVEQRSRLKNA RKVLDMANILGLSNSILRV+DRR+AVDRLLVLGG+I+TS FLWWMW RR AS
Sbjct:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASPDDAGMNLEEFGRQLDVLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSDRRQAVDRLLVLGGIIVTSVFLWWMWGRRVAS 209
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: A0A835ZDP4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP4_9STRA)

HSP 1 Score: 269 bits (688), Expect = 6.860e-86
Identity = 133/210 (63.33%), Postives = 180/210 (85.71%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAALPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMWSRRGASA 750
            MTSIVELFPKARRL++DL+T +Q++EKGHAS +D G++L+E  +QL +L+ L  QERP QRE+WRRKL+EL  ++DFLR+QL R++  R++  +EARERE LLARR+AALPS V+D+YAEEGSSLLRS+RM+GDYLQ+GQA+LASLV+QR RLK  +R+VLD+AN++G+S SILR+++RREAVDRLLVLGG++  +  L++ W+R+G  A
Sbjct:    1 MTSIVELFPKARRLAYDLQTQIQFLEKGHASADDVGVSLDELEQQLKILDSLASQERPAQRENWRRKLKELVGDKDFLREQLDRYNNSRQRQGREAREREALLARRNAALPSGVVDAYAEEGSSLLRSQRMMGDYLQSGQAALASLVDQRHRLKGVQRRVLDIANVMGVSGSILRMSERREAVDRLLVLGGMVFITGLLYYAWARKGVGA 210
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: A0A7S2XZE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE9_9STRA)

HSP 1 Score: 190 bits (483), Expect = 4.350e-55
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 1 
Query:  124 TSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAALPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLW---WMWSRRGASAS 753
            TS+VEL PKAR+L F+L+T    VE G A+ ED    L E  +QL++LE LV  ERP QRE WR+KL EL+ + DFLR  L R         +E +ER+ELL RR  A+PSSV+++Y EEG++L RS+ MV D   TGQA +A+L++QRS LK+A+RK+LD+AN+LGLS  ++R A+RR+A D+ +V GG+IIT  FL+   W  +R   S +
Sbjct:    4 TSVVELVPKARKLLFELQTQQTLVETGKANAEDVYFGLSELSQQLNILESLVNNERPAQRESWRKKLTELQRDVDFLRASLDRHVAKSSSGLREQQERQELLLRRTQAMPSSVVENYMEEGAALTRSQAMVEDLTYTGQAIMANLLDQRSTLKSAQRKILDLANLLGLSGVLMRSANRRDATDKWIVFGGMIITLGFLYFCYWYSTRSTTSVN 216
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: W7U6N0_9STRA (Golgi snap receptor complex member 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6N0_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.230e-52
Identity = 100/209 (47.85%), Postives = 144/209 (68.90%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAA-----LPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMWS 732
            MTS+ EL PK ++L+F+L+  ++ VE G+ SP++  M L E  RQ+ +L  LV QERP  RE W+R++ EL +E  FLR  L RF Q R KV+QEA+EREELLARR+        P+  ++   EEG+S  RS  M+ D L +GQA+L++L++QRS LK+AR+KVLD+ N+LG+S+ I  +A+RR+ VD+L+V GG+ +T   LW  W 
Sbjct:    1 MTSVAELLPKTKKLAFELQGQVRQVEIGYVSPDNVFMGLGELERQISILHTLVAQERPGAREQWQRRIGELHSEAVFLRTVLNRFLQSRGKVAQEAKEREELLARRYGKGGDLEAPARAVEELLEEGASYQRSSAMMNDILMSGQATLSNLLDQRSSLKSARKKVLDVLNLLGVSHRITGMAERRDTVDKLIVAGGMAVTLLVLWLCWK 209
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: B8BUE6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUE6_THAPS)

HSP 1 Score: 155 bits (392), Expect = 9.820e-42
Identity = 88/207 (42.51%), Postives = 133/207 (64.25%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAAL----PSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMW 729
            MTSIVELFPK+R+L++D R  L  V+ G   P +  ++L+E  RQLD++E L  +E P QRE W+RK+ ELR +   +R+Q   +D+      ++ +ER+ELLARR         +  M   +EE  SL  S  M+ D L +GQASL++LV QR R++   RK+LD+ N +GLSNS +R+ +RR+A D  LV GG+I+T   +++++
Sbjct:    1 MTSIVELFPKSRKLAYDSRQQLSQVQNGLICPSELFLSLDELSRQLDLMENLTNKETPAQREIWKRKILELREDAQSIRNQGNHYDRMVSAGIRQRKERDELLARRRRNRGNGGDADEMQQLSEEADSLATSHGMMNDLLSSGQASLSNLVGQRQRMRWVNRKMLDIGNKIGLSNSTMRMIERRDATDAWLVFGGMIVTLLVIYFLY 207
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: A0A7S2CFP0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFP0_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.300e-38
Identity = 86/207 (41.55%), Postives = 127/207 (61.35%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAALPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGV--IITSAFLWWMWSR 735
            MTS+VELFP+ R+LS+DL+  L+ VE    +P D  + LEE  RQ   LE LV QE   ++++W+ K+R++   RD+L  QL  +     + + E  ER+ELL R  ++LP+SV+ +Y EEG SL RS  +V + L     ++A L++QR  LK  +RKVLDM   LG+S S +R+ +RR  VD  +V GG+  +    +L W W R
Sbjct:    6 MTSVVELFPRTRKLSYDLQQQLREVEAKRMAPSDMELGLEELKRQTQTLEMLVEQE-VNRKDEWKAKIRDVCMTRDWLDSQLRHWRTQHDRAAVEEAERQELLGRVRSSLPTSVIGAYDEEGRSLSRSNNVVANLLDGAGEAMAELMDQREMLKGTQRKVLDMLTTLGVSKSTIRIIERRNVVDNAIVWGGMGFVTLCLYLLWRWVR 211
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: A0A7S2XN21_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN21_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.350e-38
Identity = 83/207 (40.10%), Postives = 130/207 (62.80%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRH----AALPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMW 729
            M SIVELFPK R+L++D R  L  V+ G   P +  M LEE  R LD++E L+ +E P+QRE WRRK+ ELR++ + +R Q   +D+      ++ RER+ LL+RR     A      ++  A+E  S+  S+ M+GD L +GQASL  L+EQR R+K  +R +LD+ + +GLSNS +R+ +RR+  D   V GG+++    +++++
Sbjct:    1 MASIVELFPKNRKLAYDARQQLAQVQNGLLPPSELFMLLEEISRSLDIMENLLSRETPSQREVWRRKILELRDDANSVRRQAEHYDRMVGANVRQQRERDALLSRRRRTRRATGEEGEINDLADEYQSMESSQIMMGDLLASGQASLTGLIEQRQRMKGVKRVMLDIGSKIGLSNSTMRIIERRDVTDAYFVFGGMVVCLLLMYFLY 207
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: A0A7S3PUS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 7.240e-38
Identity = 87/211 (41.23%), Postives = 130/211 (61.61%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAALPSSVMDS------YAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMWSR 735
            MTSIVELFPK+R+L++D R  L  V+    S  +  ++L+E  RQL ++E L+ +E P QRE WRRK+ EL+ +   +R Q   + +      +  REREELL R          DS       AEE +SL  S+ MVG+ L +GQA L SL++QR R++ A+R VL++ N +GLSNS +R+ +RR+  D  LVL G+++T   ++++W R
Sbjct:    2 MTSIVELFPKSRKLAYDARQQLSQVQNNLLSATELYISLDELQRQLSIIEQLLSRETPAQREIWRRKILELQEDASSIRRQGEYYHRMVNSNLRVQREREELLTRXXXXKKDGFGDSELGIQDLAEESTSLASSQNMVGELLMSGQAQLNSLIDQRRRMRGAKRMVLNIGNTIGLSNSTMRMIERRDENDVKLVLAGMVLTLLVIYFVWIR 212
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: A0A6U0P085_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0P085_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.790e-37
Identity = 80/212 (37.74%), Postives = 130/212 (61.32%), Query Frame = 1 
Query:  121 MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAAL-------PSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMWSR 735
            MTS+ ELFPK+R+L++D R  L  V+       +   +L+E  RQL++++ LV Q+ P QR+ W+RK+ ELR + + +R Q   +D+      +E +EREEL+  RH            + M+ + EE  SL  S+ MVGD L +GQ+ L SL++QR+R++  +R VLDM + +GLSN+ +R+ +RR+  D   V GG+ +T   ++++W R
Sbjct:    1 MTSVNELFPKSRKLAYDARQQLCQVQNKSLHASELFFSLDELSRQLNIMDSLVSQQTPAQRQVWKRKILELREDANSIRRQGQYYDRMVSANVREQKEREELMTLRHRRGGRGRGDDAENAMNDFTEESESLAMSQNMVGDLLVSGQSQLNSLMDQRNRMRGVKRLVLDMGSKVGLSNATMRMIERRDTTDAYFVFGGMFLTILIIYFVWFR 212
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BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Match: K0RHB4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHB4_THAOC)

HSP 1 Score: 144 bits (362), Expect = 4.940e-36
Identity = 91/234 (38.89%), Postives = 133/234 (56.84%), Query Frame = 1 
Query:   52 PDITSREAFAGKCSSREQQSLVE---MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLEGLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEAREREELLARRHAALPSS-----VMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQRSRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLWWMW 729
            P ITSR +     +   Q   +    MTSIVELFPK R++ +D R     V+ G   P +  ++L+E  RQLD++  L  +E P QR+ W RK+ ELR + D LR Q   +D+      ++ REREEL+ RR     +       M   AEE  SL  S  M+ D L +GQ+SL+SLV QR +++   R+VL++ N LGLS S +R+ +RR+  D  LV GG+IIT   ++ ++
Sbjct:   90 PTITSRNSAQSSNAGVLQPCSISASTMTSIVELFPKCRKICYDARQTAAQVQNGLIDPSNLFLSLDELSRQLDIMSSLAQKETPAQRQMWERKILELREDSDGLRRQGEHYDRMVGAGMRQRREREELMMRRRKNRTTGDGVADEMAQLAEEADSLASSHGMMNDLLASGQSSLSSLVNQRQKMRWINRQVLNIGNKLGLSQSTIRMIERRDTTDAYLVFGGMIITLLVIYCLY 323
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1137.1205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYN9_ECTSI1.140e-12591.87Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835ZDP4_9STRA6.860e-8663.33Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2XZE9_9STRA4.350e-5550.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7U6N0_9STRA1.230e-5247.85Golgi snap receptor complex member 2 n=2 Tax=Monod... [more]
B8BUE6_THAPS9.820e-4242.51Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2CFP0_9STRA1.300e-3841.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XN21_9STRA2.350e-3840.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3PUS9_9STRA7.240e-3841.23Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U0P085_9STRA2.790e-3737.74Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
K0RHB4_THAOC4.940e-3638.89Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1137contigL-elsbetiae_contig1137:19851..25294 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.0
Seed ortholog evalue4.6e-101
Seed eggNOG ortholog2880.D7FYN9
Preferred nameGOSR2
KEGG rclassRC00004,RC00061,RC02742,RC02857
KEGG koko:K00627,ko:K03935,ko:K08496,ko:K19200
KEGG TC3.D.1.6
KEGG ReactionR00209,R02569,R11945
KEGG Pathwayko00010,ko00020,ko00190,ko00311,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04130,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00010,map00020,map00190,map00311,map00620,map01100,map01110,map01120,map01130,map01200,map04130,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143,M00307
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0002682,GO:0002791,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0006892,GO:0006896,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006950,GO:0006986,GO:0006996,GO:0007034,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0009987,GO:0010008,GO:0010033,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016482,GO:0022607,GO:0023052,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030968,GO:0031090,GO:0031201,GO:0031224,GO:0031347,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033116,GO:0033365,GO:0033554,GO:0034613,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036498,GO:0042147,GO:0042175,GO:0042221,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045184,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048280,GO:0048284,GO:0048583,GO:0050708,GO:0050776,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051179,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0061024,GO:0061025,GO:0065003,GO:0065007,GO:0070201,GO:0070727,GO:0070887,GO:0071310,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0080134,GO:0090087,GO:0090114,GO:0090174,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:1903530
EggNOG free text desc.vesicle fusion with Golgi apparatus
EggNOG OGsKOG3251@1,KOG3251@2759
EC1.6.5.3,1.6.99.3,2.3.1.12
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko01002,ko04131
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-17_000170.1
Exons5
Model size1219
Cds size636
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815345.8931806-UTR-L-elsbetiae_contig1137:19850..203131622815345.8931806-UTR-L-elsbetiae_contig1137:19850..20313Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1137 19851..20313 -
1691682851.9753304-UTR-L-elsbetiae_contig1137:19850..203131691682851.9753304-UTR-L-elsbetiae_contig1137:19850..20313Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1137 19851..20313 -
1622815345.9476051-UTR-L-elsbetiae_contig1137:24429..244841622815345.9476051-UTR-L-elsbetiae_contig1137:24429..24484Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1137 24430..24484 -
1691682852.0379562-UTR-L-elsbetiae_contig1137:24429..244841691682852.0379562-UTR-L-elsbetiae_contig1137:24429..24484Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1137 24430..24484 -
1622815345.9582481-UTR-L-elsbetiae_contig1137:25229..252941622815345.9582481-UTR-L-elsbetiae_contig1137:25229..25294Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1137 25230..25294 -
1691682852.0464962-UTR-L-elsbetiae_contig1137:25229..252941691682852.0464962-UTR-L-elsbetiae_contig1137:25229..25294Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1137 25230..25294 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815345.9058793-CDS-L-elsbetiae_contig1137:20313..204871622815345.9058793-CDS-L-elsbetiae_contig1137:20313..20487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 20314..20487 -
1691682851.999878-CDS-L-elsbetiae_contig1137:20313..204871691682851.999878-CDS-L-elsbetiae_contig1137:20313..20487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 20314..20487 -
1622815345.914373-CDS-L-elsbetiae_contig1137:21316..214541622815345.914373-CDS-L-elsbetiae_contig1137:21316..21454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 21317..21454 -
1691682852.0099127-CDS-L-elsbetiae_contig1137:21316..214541691682852.0099127-CDS-L-elsbetiae_contig1137:21316..21454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 21317..21454 -
1622815345.9289134-CDS-L-elsbetiae_contig1137:22802..229291622815345.9289134-CDS-L-elsbetiae_contig1137:22802..22929Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 22803..22929 -
1691682852.01999-CDS-L-elsbetiae_contig1137:22802..229291691682852.01999-CDS-L-elsbetiae_contig1137:22802..22929Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 22803..22929 -
1622815345.9383755-CDS-L-elsbetiae_contig1137:24232..244291622815345.9383755-CDS-L-elsbetiae_contig1137:24232..24429Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 24233..24429 -
1691682852.029164-CDS-L-elsbetiae_contig1137:24232..244291691682852.029164-CDS-L-elsbetiae_contig1137:24232..24429Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1137 24233..24429 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1137.1205.1prot_L-elsbetiae_contig1137.1205.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1137 20314..24429 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1137.1205.1

>prot_L-elsbetiae_contig1137.1205.1 ID=prot_L-elsbetiae_contig1137.1205.1|Name=mRNA_L-elsbetiae_contig1137.1205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp
MTSIVELFPKARRLSFDLRTLLQYVEKGHASPEDAGMNLEEFGRQLDVLE
GLVGQERPTQREDWRRKLRELRNERDFLRDQLGRFDQGRRKVSQEARERE
ELLARRHAALPSSVMDSYAEEGSSLLRSRRMVGDYLQTGQASLASLVEQR
SRLKNARRKVLDMANILGLSNSILRVADRREAVDRLLVLGGVIITSAFLW
WMWSRRGASAS*
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mRNA from alignment at L-elsbetiae_contig1137:19851..25294-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1137.1205.1 ID=mRNA_L-elsbetiae_contig1137.1205.1|Name=mRNA_L-elsbetiae_contig1137.1205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5444bp|location=Sequence derived from alignment at L-elsbetiae_contig1137:19851..25294- (Laminarionema elsbetiae ELsaHSoW15)
CTTGGTTGCAAGGCACGCTGCGAAGGCTCTGCTGGACGCACTGATTTGTT
GCCGGACATCACCAGGTCAGTACATAAGGCTGTGGCCAAGTACCCTACAT
GTTATAGTCCAGTAGTGTTGATATTTTTGTGTAGAACAAACCCACAGAGC
CCGCCGTACGCCTCGCGCGCGGACGAGACTCAGGGCAGGTATCTGCAGCA
GTAGTGTGCTTACAGGGGTGTGCAAGGATAAGGCTGTGCTCATGTTACAG
GTCTTAGCATCGCACGTGCAAACGAACTATCCAATGATGAGACGCCAAGT
CGCAGGCAAAAGCGGCGTAATACATACGGAACACCAAATTCAGCGCCGAC
TCCCAGTCTCCCCGATCCAAGATGAAGACGAAGTACCGGTATTGTAACAC
ACACCAAAAACGTTAAAAGTAGTCTTCTCTCTGGCCGAATGTACGTCGTA
ATGTAGGTACGAGCGTACAGCTCGAGGTGCAGGAGACAGTGTGCAAACGC
ACACACATATGTCGAAGAGCCGCATCCACAGCTGAGCAGCTTCCTTATAA
AAGTCTGTGTATCTATGTAGCAGGGCGGGGTTCACTGCAACCGCTACCAC
ACTGCTTTACCACGAGCAACCTCGCGAATGCCGTGGTGTTTTCACTCGTT
TCTTGATCAAGAGCGCGTTCGGCATACGGTGGAAGCGCCTGCTACTGCTG
ATTTCATTATCGCAACGTATTGTTGTACTTCTATATAACAGGCATTTCGA
AGCGTGTTCCTGTTTCTGATATTTCGTTCCCCCGGCGACCTCTCCTGTTG
TGCACCGCAGCCGGGAGGCTTTCGCTGGAAAGTGCTCCTCGAGAGAGCAG
CAAAGCCTCGTGGAGATGACGTCCATCGTCGAGCTGTTTCCCAAGGCGAG
GAGACTGTCTTTCGATCTCCGGACGCTGCTGCAGTACGTCGAGAAGGGGC
ACGCTAGCCCCGAAGACGCGGGCATGAACCTAGAGGAGTTTGGGAGGCAG
CTGGATGTGCTGGAGGGTCTGGTAGGGCAGGAGCGGCCGACACAGCGAGA
AGACTGGCGAAGGTACGTGCGTACATGCGTATCCACTGCACAAAATGTCT
ATGCCTACTGCATGAAGATACTCCCTCCTTAGTTTAAAGTTTATATGTAG
TAGTAGTAGTTTGATCCACACTGCTGAGCGAATGATCTGTACATGAGACG
AAGCCCGCCCTTCGCGGCGGTAAAACCAGCGCGCGCGCGAACGGAAGACA
CCATACTCCCACAACAAAAGTTCCGTGGACAAGAAAGCCACGAACTGCTG
TTGTGCGGCTTGCTGATTTTGTGCCAGTACAATAGTCGGGGGCGGTGAGG
CAGGGTTATTGTTATGGTATGTATGTGTGTCTAGTACAACAGCAGCCCTC
CTGGACGTTTTGTAGACCGCTGACATTTGTAGACATTGGTTAAGAATTGT
AAGATGCCTTGCAGTTGGCACACAAACCACAGCCGCGGCGGCGACGACCA
CCGTACTACTACTACTACCACTACTACTACTATTAATACTACCGTAGGAG
ACACAAGATACCACACCCGCTGGACCGAATTTTAGAGCCCCATTACTCCG
TAACGAAGAGGGTGCCAGCCATTTTCGGACAGCCCTCGACTAGATCTTTC
CAGCGCCACCCCCAATAGGCACTGACACTCTTCTTGCTGGGGAGGAATCG
AGCTTTGACAATCTGTCCAGGGGGTGTGGTATCTCGTGTCAACTACGGTA
CTGCTTGCGGGCTCAAGTTCCAGCATGGCACGATACTGGATAGCTGTGTT
TTGATCACATGAGAGGACGTTGTTGTCTGTCACCTTGTCGTGTTCGTCGA
GTGCGGTTTCTGGGAAAGCACTACAAGTACATAGACTACTCCTCCTCATA
CCAATTTCGCCGCAAGCTCTTGGGTTCCTGCAGGCCGTGTACGCTCTGCC
AGCTGCAACGGCATGAAATGCCGCTTGCTGTGTGCTGCCGGCTGCTCCAC
AGATATCCGTATATCTATCTAGTACATACATAGTCTCGTCCCTACAAACC
CTTGCTTCGAGTATGCTCTCAATATTTCCACGGTACACAGTATACGGCAC
CAAGTAGTACAGAAACACCGGATCATGGGTGAGGACAACAAAGTACTTGA
AGTATCTTTGAAACGAGGCCATATCGTGCTGTTCCATCTACGTTTCTCTT
CGTATTATCTCAGCTCGCAATTTTGTTGCATGCAGCTGTTCATCTCCGGT
ACCGTCACCGGAGTCTGGCATTGTAGCGAGTCCGGAGGTGTGCTGTAGTG
CCTGCTGTATCTAGTGCTGACCTGAGAACGATTGTCCCACGCCCTCCAAC
CACCCGCCATCACAGAAAGCTTCGTGAGTTGCGAAACGAGCGGGATTTCT
TGCGAGATCAGCTGGGGAGGTTCGACCAAGGGCGGCGAAAGGTCAGCCAG
GAGGCGAGGGAGCGAGAGGAGCTTTTGGCACGAAGACATGCGGTAAGCCA
GCCAACCCCCCTCGACGGAATGTGATACTGGTTGTTTTTGTCTCGACATT
GAAAACCGTTCCGATCTCTCTATCCAGTACACCTCCATGAGTCCGTACTA
ACCCAGCAATGACGCGGTGAATTCCCGTGATCACAGGATAGCTTGCCCTA
AAAGGGTACAGATTACTGAAAAAATGAAAAAATAAAACGGACCCGAGGGG
CCCACAAAGCACCAAACAAAATATCAGATATATATAGGCTGGAGCCCTCC
GCTCCCCTCTACACGCTATGCGAAGTGATATGGTGATGCCGTAATCATGC
GAGTCATCGCACCCCCCCCGCAACCATTTTCAAAGCTCGAGTTGTATACC
TTAATGAAAGGGATGTCGGTATCGAAAAGGGTGGCGTTGGGACGATCACG
CCAAGAGCTGCCTTGCATAGAAGCGCGCCGTTTGGTGTTGGTACCCTCTT
CGTTAAGGAGTAATCGAGCTTCGAAAATAGGTACGGGGGGGTGCGATGAC
TCGCATGATACGGTAGTCTATACCTGGTATATCTGTGTACTGGTATATCT
GTGTACTTCGACGCCCCTAAGTGGCTAGCACACCCTTGGCTGAGTTCACA
GGATAGCGAGAAAGAGAGAGAAAGAGAGGGGGAGACAGACAGACAGACAG
ACAGACAGATAAATGAAGGACGTGGACAGTGGACATCAGCGTCAGAAGGT
TATCTCGTAGGATGCCTCGGTGAAATAAAGTCCGATTGGGTCGGCATGTG
CCATTGCTAGTGCTGTAGGTCGGAGGCTGGTGGTGTTTGTTCTGGTCTAC
CCTATATACCACCGCAAGAGAAGGAGGCAATACCCGCGAGTCGGAGCGCA
CAAGGAGCCTCAATGCGATAAAGATTTTGGTGTAAAGCCCAGTCGAGGTG
TGCGCCGCAAAGGCGTCTCGCCTGCTGTGACGCAAATTGTATATCTCGCG
GTAGCTGGGCTCCTAGAGCACCGGCTTGGTTGCTGCACCGTACCATCACA
CCCTTTGCCATCGCAACATTCATCTTATGAAGTATATAGTATCCCTTGCT
CTCTGACACAAGCACTTACAATGCTGCCGGCAGCTGCTGACCTGAGTGAC
TATTTGGCTCTGTCTTGAGCGGGTGTGCCGATCCTCAAAGTTCCGTGTTG
GCGGCTACTGGTGTGCACGCTACATACAGCAGTCGTGCAGGGAATCGTAT
ACCTATCTCCCTCTCAATTTTACATTTGCTGAGGACATCCGAGGCACTGC
TCTACCTTACCATCGTACACCTATAGGTAGGTACAACTGTACACCGAAGC
ACCCCTGACCCTCCCTAAATGTAACGGTAATCGACATCAGGCCCTGCCAT
CGTCGGTCATGGACTCGTACGCGGAGGAGGGGAGCTCTCTGTTGAGGTCT
CGCAGAATGGTGGGCGATTACTTGCAGACAGGACAGGCGTCGCTAGCCAG
CCTTGTCGAGCAGCGATCGAGATTGAAGGTGGGGTGCAGCAGTAGTAGTA
CACACTACTCTATCGTTTGGTAGATAGATAAGGCCTTGTCGTTCTAAGAC
TGTTCTCGCTAATCGCGGGTTCTACTTGTTACGGTGATTGGTTGAAAATA
CGCCGCTTGTCATTATCCTGGTGTTTGTGGTGGGTTGCTCTTCTCGGTTT
ACAGTCGGGTCCAAGCGTGAGTGTAAGGTGACGGGAGATACCACACCCCC
TGGGCCGACTTTTAGAGCTCCATTACTGCCTCACGAAGAGGATGCGAGCA
CCAAACGGCAATTTTTCGGACAGCCCTGGACCAGATATTTTCAACGCCAC
CCCCTTTCGGCACTGGCACTCTTCTTGCTGGGGAGGAATCGAACTTTGAA
AATGTGCCCAGGGGTGTGGTATCTTGTGTCGCCTACGGTTTGTAGCTCGC
TTAAGCTTGTGGATGGCGTGTACAAAGACGTTCGGCTGCAACTACATTTA
GGGTCCAGCGAACGTGGCCCGAGAGCGTGAGAACTCAAAGACACGACACT
CTTGCTCGAGCAGCAGCTCCCTGATGGCACAGCAGTAGTGCCGGTTAGGA
AGCCTCGAAGGGCTTGCTATTGCTGCGCCGGCTGTCGGGTGTTTGGTGCT
GCTACTCAGCGTGCGGGTTAGTGACATGAAGACAGGTGTAACTAGGCGTT
CACTTTTCTCTGTGTCGATATGTAGTTCAAAGTAGTTGTCGAGCGCCGCG
GGCTCGATCGCATCAGCAGCAACCTGATACTTGATACTTACTTACACGCG
TGTTTTGTCGGCACCCCTCCCACCCATGCTGCACCTCGACCCCTTTGGCT
TCCACAGAACGCACGCCGAAAAGTGCTGGATATGGCGAACATCCTGGGGC
TCAGCAATTCCATTTTGAGAGTGGCAGATAGACGAGAAGCCGTTGACAGG
CTGTTGGTGTTGGGGGGGGTCATCATCACCTCGGCGTTTTTGTGGTGGAT
GTGGAGCAGACGAGGTGCATCAGCATCGTAGGTGTTGTTGCCGTTGTGCC
GGATGTTGGTGCTGCTGCTGGTGCATTGCAGCTATTCTTTGCGTCGTGAC
ATTCTTAAGTCGGTCTTGAATCTCAAGTGGATGTACATACATATGGTTCA
GCGCTGCCGTTCAAATTGCATGATGGGTCGCTGGAAGGACATATTATTGC
AGTGTAAATGCACGGAATGTGTAGGTTCTGACGCTTGTCATATGTTAATT
TGTTTCTACCAGTACACCCTTGACGCTTGCTCCCGTTCGCGGAAAGCTTG
GAGCTCGTGGTTGTCGTCGAATGCCAGGAGCTCGTATACTGCAGCAGTAC
GAAACGAACGACGAATGTTAGTGCAAGCACTGGTATTTACCTGGTACATT
GACATGTGTACAAGGCTGACAGTGATTCAAAAAGGAGTTCAATTAACGAG
CGTACTCATCAAGTGCAGATCTTGAGATACCACAAATGGACTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1137:19851..25294-

>mRNA_L-elsbetiae_contig1137.1205.1 ID=mRNA_L-elsbetiae_contig1137.1205.1|Name=mRNA_L-elsbetiae_contig1137.1205.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1272bp|location=Sequence derived from alignment at L-elsbetiae_contig1137:19851..25294- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTCCATCGTCGAGCTGTTTCCCAAGGCGAGGAGACTGTCTTTCGA
TCTCCGGACGCTGCTGCAGTACGTCGAGAAGGGGCACGCTAGCCCCGAAG
ACGCGGGCATGAACCTAGAGGAGTTTGGGAGGCAGCTGGATGTGCTGGAG
GGTCTGGTAGGGCAGGAGCGGCCGACACAGCGAGAAGACTGGCGAAGATG
ACGTCCATCGTCGAGCTGTTTCCCAAGGCGAGGAGACTGTCTTTCGATCT
CCGGACGCTGCTGCAGTACGTCGAGAAGGGGCACGCTAGCCCCGAAGACG
CGGGCATGAACCTAGAGGAGTTTGGGAGGCAGCTGGATGTGCTGGAGGGT
CTGGTAGGGCAGGAGCGGCCGACACAGCGAGAAGACTGGCGAAGAAAGCT
TCGTGAGTTGCGAAACGAGCGGGATTTCTTGCGAGATCAGCTGGGGAGGT
TCGACCAAGGGCGGCGAAAGGTCAGCCAGGAGGCGAGGGAGCGAGAGGAG
CTTTTGGCACGAAGACATGCGAAAGCTTCGTGAGTTGCGAAACGAGCGGG
ATTTCTTGCGAGATCAGCTGGGGAGGTTCGACCAAGGGCGGCGAAAGGTC
AGCCAGGAGGCGAGGGAGCGAGAGGAGCTTTTGGCACGAAGACATGCGGC
CCTGCCATCGTCGGTCATGGACTCGTACGCGGAGGAGGGGAGCTCTCTGT
TGAGGTCTCGCAGAATGGTGGGCGATTACTTGCAGACAGGACAGGCGTCG
CTAGCCAGCCTTGTCGAGCAGCGATCGAGATTGAAGGCCCTGCCATCGTC
GGTCATGGACTCGTACGCGGAGGAGGGGAGCTCTCTGTTGAGGTCTCGCA
GAATGGTGGGCGATTACTTGCAGACAGGACAGGCGTCGCTAGCCAGCCTT
GTCGAGCAGCGATCGAGATTGAAGAACGCACGCCGAAAAGTGCTGGATAT
GGCGAACATCCTGGGGCTCAGCAATTCCATTTTGAGAGTGGCAGATAGAC
GAGAAGCCGTTGACAGGCTGTTGGTGTTGGGGGGGGTCATCATCACCTCG
GCGTTTTTGTGGTGGATGTGGAGCAGACGAGGTGCATCAGCATCGTAGAA
CGCACGCCGAAAAGTGCTGGATATGGCGAACATCCTGGGGCTCAGCAATT
CCATTTTGAGAGTGGCAGATAGACGAGAAGCCGTTGACAGGCTGTTGGTG
TTGGGGGGGGTCATCATCACCTCGGCGTTTTTGTGGTGGATGTGGAGCAG
ACGAGGTGCATCAGCATCGTAG
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