mRNA_L-elsbetiae_contig1137.1203.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: D7FYP1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP1_ECTSI) HSP 1 Score: 484 bits (1246), Expect = 3.450e-162 Identity = 310/496 (62.50%), Postives = 347/496 (69.96%), Query Frame = 2
Query: 2 RVLPISAQRSFRDGAFRAVSDYGVAVGAGVSAVFRPRLAARFLAVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQ---EAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXX----------QLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGMLHTLFDYSHPHLLGGKPHRPTSGDPWSRNTPPAPAT--LQHAQRQPQLNGQDAPRSRSPGCGPSERGASP------------GGDVRDGDTTT----PVLGGPLGGQGHGRASSGVRALGRRLPRSLVVHGTADATVPFSQTAAVAAALKTLGVPTVVRYDPGGDHFGMVGQLMFTKQSLVETAISQFTSQQAKDDARQERAKGDTG 1396
RVLP+SAQRSFRDGAFRAVSD GVAV AGVSAVFRP LAARFL+ GR+RED+RYG HP+QVIEVV P + SR + + PKLIVFVHGGAWGSG TWMYRLMVDRL+ P+L SY+VASVGYRVHPDADT GQVNDLA+AMRWIS N G +GFD +PEVYLMGHSSGAHI +LYL++QAE + EA AAA A+ P G P P G XXXXXXXXXXXX QL+VEGFIGL+GVYDV RHYLYESWRGVHEISPMKA+NGG LHTL DYSH LG HR T WSR P AP++ QH Q PR+++P G SP GG RDG ++ PV G GG A R LGRRLPR LV+HGT+DATVPFSQTAAVAAAL+ LGVPTVVR++ GGDHFGMVGQLMF + SLVETAISQFTS QAK+DAR+ER D G
Sbjct: 32 RVLPVSAQRSFRDGAFRAVSDGGVAVAAGVSAVFRPGLAARFLSAGRRREDHRYGGHPRQVIEVVHPVRDDGPSRSAVGDD--EDPKLIVFVHGGAWGSGSTWMYRLMVDRLSHSHHPRLRSYSVASVGYRVHPDADTDGQVNDLAEAMRWISRNTGTMGFDRDPEVYLMGHSSGAHIGMLYLVQQAEERGMAEAEAAARAN------APTGLPNI--PGGXXXXXXXXXXXXXXXGDGDVIGEDGGRQLDVEGFIGLSGVYDVHRHYLYESWRGVHEISPMKAANGGRLHTLSDYSHQCFLGTGSHRATRT--WSR-PPLAPSSGPSQHQQ----------PRAQAPAKGEEPSTYSPRDTQPRGNVVMSGGGRRDGGSSLASKEPVALG-AGGVPVPEAGDRGRGLGRRLPRVLVMHGTSDATVPFSQTAAVAAALRALGVPTVVRFEQGGDHFGMVGQLMFDQGSLVETAISQFTSNQAKEDARKERQGRDQG 503
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: A0A1Z5KRD0_FISSO (AB hydrolase-1 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRD0_FISSO) HSP 1 Score: 128 bits (322), Expect = 4.440e-28 Identity = 99/290 (34.14%), Postives = 136/290 (46.90%), Query Frame = 2
Query: 5 VLPISAQRSFRD-GAFRAVSDYGVAVGAGVSAVFRPRLAAR-FLAVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVG-QVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGMLHTLFDYSHPHL 865
+LP+ Q RD G FR + D+ V A + A+ P A R FL + + YG HP Q IE+ S +++ L+ FVHGGAWGSG W YRLM DRP VA +GYR +P + TV QV D A ++ + + C+ + +MGHSSGAH++LL L+ QA+ RK K+ A A V++ V F+GL+G YD+ H+ YE+ RGV E+SPMK G F + PHL
Sbjct: 116 ILPLRLQNYTRDSGLFRCIVDHLVQASAPLMALTAPSSALRDFLYLTSVMRKHAYGDHPMQFIELYMSSERPVRN-------------LVFFVHGGAWGSGMPWFYRLMAAPFVCCDRPDTA---VAVIGYRTYPSSPTVDEQVEDCQLAANYLLQEYPDL---CQGIITVMGHSSGAHVALLMLVEQAKEWM---------RKRKSA------AREEAAVAS---------------FNVTNFVGLSGPYDISHHFDYEASRGVEELSPMKPVCG-YSREAFRRNSPHL 355
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: A0A7S1ZUJ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZUJ4_9STRA) HSP 1 Score: 127 bits (318), Expect = 7.450e-28 Identity = 98/289 (33.91%), Postives = 145/289 (50.17%), Query Frame = 2
Query: 5 VLPISAQRSFRD-GAFRAVSDYGVAVGAGVSAVFRPRLAARFLAVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKA-MRWISGNFGLV-----------GFDCEPEVY---LMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNG 823
+LP+S+Q FRD G FR+++D V + + A+ +P AA FL + + E+ RYG H Q +E+ PS+ + + RG L+ FVHGGAWGSG WMYRL+ A P +L V VGYR +PDA+ QV+DL A + + L+ G D E ++GHSSGAHI+ L L++ + + + K K + S +S+ ++ + F+GL+G YD+ H+ YE+ RGV EISPMK + G
Sbjct: 8 LLPLSSQNKFRDNGGFRSLADTSVLLSTPLIALTKPHAAANFLKLSKSYEEIRYGSHDMQRMELYLPSSTTTSDND---VRG-----LVFFVHGGAWGSGMPWMYRLV----ALPFLEEL-RMAVVIVGYRTYPDANVSEQVDDLVSAAIEFARVKPDLIQKKKKYKNNTRGGDDTNEWLGNSIIGHSSGAHIAFLMLLKHLCLKSKLIKSQRNKLKEKEI--------SKIDMSSLSSILG---------IDFDSFVGLSGPYDISHHFDYEAGRGVEEISPMKPACG 266
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: B7FZB1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZB1_PHATC) HSP 1 Score: 127 bits (318), Expect = 1.020e-27 Identity = 95/275 (34.55%), Postives = 134/275 (48.73%), Query Frame = 2
Query: 8 LPISAQRSFRD-GAFRAVSDYGVAVGAGVSAVFRPRLAARFLAVGRQREDYRYGPHPQQVIEVVRP--STESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNG 823
L +++Q FRD G FR + D+ V + A + P FL + +Q + RYG + Q I+ P E+ + R A++ LI FVHGGAWGSG WMYRL+ +LG Y VA VGYR +PD V QV DL A +++ CE +V +MGHSSGAHI+LL+L+ ++ T S TA ++ F+GL+G YD+ H+ YE+ RGV E+SP+K +NG
Sbjct: 98 LSVASQNRFRDSGGFRRLVDFLVVLSAPAIPLSAPSAGWNFLMLTKQVKKLRYGLNSLQYIDFFLPYDPAETFTN-----TRSARR--LIFFVHGGAWGSGEPWMYRLVAGAFL-----ELG-YAVAIVGYRTYPDGTVVDQVADLRDAAAFLAQTHPAW---CERQVTVMGHSSGAHIALLFLVD----------------RFITSTKLSVTANGSG------------------DFRIDSFVGLSGPYDISHHFDYEANRGVEEMSPLKPANG 322
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: A0A1Z5JJK0_FISSO (Prenylcysteine alpha-carboxyl methylesterase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJK0_FISSO) HSP 1 Score: 126 bits (316), Expect = 2.690e-27 Identity = 98/291 (33.68%), Postives = 139/291 (47.77%), Query Frame = 2
Query: 5 VLPISAQRSFRD-GAFRAVSDYGVAVGAGVSAVFRPRLAAR-FLAVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDR-LARPDRPQLGSYTVASVGYRVHPDADTVG-QVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGMLHTLFDYSHPHL 865
VLP+ Q RD G FR + D+ V A + A+ P A R FL++ + + YG HP Q IE+ PS +++ L+ FVHGGAWGSG W YRL+ + R D VA +GYR +P + TV QV D +A ++ + + C+ + +MGHSSGAH++LL L+ QA + RK+ T A V++ V F+GL+G YD+ H+ YE+ RGV E+SPMK G F + PHL
Sbjct: 119 VLPLRLQNYTRDSGLFRWIVDHLVQASAPLMALTAPSSALRDFLSLTSIMQKHAYGSHPMQYIELYLPSERPVRN-------------LVYFVHGGAWGSGVPWFYRLLAAPFVCRRDT------AVAVIGYRTYPSSRTVDEQVEDCQRAANYLLQEYPEL---CQGIITVMGHSSGAHVALLMLVEQANKRM-------RQRKF--------TEREDAAVAS---------------FNVTNFVGLSGPYDISHHFDYEAARGVEELSPMKPVCG-YSREAFRRNSPHL 356
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: A0A8J5XXD4_DIALT (Abhydrolase_3 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXD4_DIALT) HSP 1 Score: 120 bits (300), Expect = 8.330e-26 Identity = 91/279 (32.62%), Postives = 124/279 (44.44%), Query Frame = 2
Query: 2 RVLPISAQRSFRDGAFRAVS-DYGVAVGAGVSAVFRPRLAARFL-AVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWI--SGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGG 826
R LP+ Q RD VS D GA + RP R + A R YGP PQ +++ P+ +R P +IVFVHGGAWGSG +YRL+ +RLA +T +GYR +P A QVND+A+A+ W S FG E +++GHSSGAH++ + ++R+A + A P S G+AGVYD+ RH +E RGVHE+SPMK + GG
Sbjct: 14 RALPLWMQHGMRDSGLLGVSVDMATIAGAAAALAARPAALTRLVRASATSRLGVAYGPLPQHRLDIFEPAPLHAPAR--------PAPDVIVFVHGGAWGSGSRLIYRLVGERLAAE------GFTCLVLGYRRYPRASMEEQVNDVARALEWAADSAEFG------ERARHVLGHSSGAHVASMAVMRRARARLA------------------PLCSS--------------------------LTGVAGVYDIARHLDFERGRGVHEVSPMKPAAGG 228
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: A0A7S1UA30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA30_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.370e-23 Identity = 98/277 (35.38%), Postives = 129/277 (46.57%), Query Frame = 2
Query: 41 GAFRAVSDYGVAVGAGVS-AVFRPRLAARFLAVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWI---SGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGMLHTLFDYSHP 859
G R +SD G A+ G+ AV +P L +L R D YG +Q ++VV R + A +++F HGGAWGSG YR RL+ D TVA VGY V+P A GQV+ +A A RW +G L D + V L GHSSGAHI+ L I AE A A + P G+ + +GF+GLAGVYD+R+HY +E+ RGV ++SPMK + GG LFD P
Sbjct: 39 GLVRGLSD-GSALATGLRRAVDKPALIGAYLRPQRAVLDVTYGAAAEQRLDVV----------PRRSDAAAGARPVVLFFHGGAWGSGTKLFYRNFARRLS--DEVDA---TVAVVGYPVYPTATAWGQVSSVALATRWARSPAGRAVLGAADVDAGVLLCGHSSGAHITSLSAIWAAE-DVANAGFGDRDEDGDEAP----------GLKHMIHAATEVTVEERLAVLPDGFVGLAGVYDIRKHYAFETSRGVADVSPMKPACGGSP-KLFDAMSP 287
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: W7U0V2_9STRA (Peptidase_S9 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V2_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.580e-22 Identity = 100/319 (31.35%), Postives = 135/319 (42.32%), Query Frame = 2
Query: 5 VLPISAQRSFRDGAF----RAVSDYGVAVGAGVSAVFRPRLAARFLAVGRQREDYRYGPH-PQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVH-----------PDADTVG-------------QVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGMLHTLFDYSHPHLLGG 874
++P+SAQR+FRD RAVS VA+G + P+ RFL++ R + + YG P +E+ R G L+VF+HGGAW SG WMYRL+ L R V VGY + PD G QV+DL + ++ + + ++L GHSSGAHI L+L+R+ G Y TLP V+GF+GL+GVYDV H+ YE+ RGVHEIS M A NGG+ F + P L G
Sbjct: 28 IIPLSAQRAFRDRHAHWFDRAVSVSAVALG-----IRHPKALLRFLSLRRTAQTFHYGHESPDHFVELHR--------------CGKPGAPLVVFMHGGAWFSGRPWMYRLISTALNRR------GMDVGIVGYGTYKTLPPIPGTRLPDPALDGTADPAVVLGHVDHQVDDLQHCLEFLMLDPRSPYSADQVPIFLSGHSSGAHICSLFLLRETLGAPG----------YNTLPR-----------------------------RVQGFVGLSGVYDVAVHHEYEARRGVHEISGMGACNGGLAR--FHRNSPTTLAG 280
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: B7S3X1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S3X1_PHATC) HSP 1 Score: 108 bits (269), Expect = 2.420e-22 Identity = 72/235 (30.64%), Postives = 111/235 (47.23%), Query Frame = 2
Query: 128 LAVGRQREDYRYGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGML 832
+ + + E + YG +QVI++++P++ + S + LIVFVHGGAWGSG +YRL+ + DR VA VGYR +P D GQV D+ A+R + + +D ++ L+GHSSGAHISLL L+ + ++++ +IG++GVYD+ HY +E+ RGV ISP+ + GG L
Sbjct: 8 ITIETRLESFSYGSDKKQVIDIIQPASTAPTSNLK------VNSSLIVFVHGGAWGSGFPALYRLIARPFVQTDR------AVAVVGYRTYPTTDVDGQVLDVRNALRALQQRY--TQYD---DITLIGHSSGAHISLLGLLNSTNPMD---------------------------------------------VDIDRWIGISGVYDLASHYRFEAGRGVERISPLAPAGGGSL 180
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Match: A0A7S4T4W7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T4W7_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.530e-22 Identity = 77/232 (33.19%), Postives = 110/232 (47.41%), Query Frame = 2
Query: 161 YGPHPQQVIEVVRPSTESIQSRERERERGAKKPKLIVFVHGGAWGSGCTWMYRLM-VDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWISGNFGLVGFDCEPEVYLMGHSSGAHISLLYLIRQAEGQEAAAAAVAHNRKYKTLPAGSPTAGSPAGVSTXXXXXXXXXXXXXXQLEVEGFIGLAGVYDVRRHYLYESWRGVHEISPMKASNGGMLHTLFDYS 853
YGPH +QV +V+ S +++E E G P L++F+HGGAWGSG MYRL+ + L R +Y V +GYR +PDA GQV+DL +A+ + + VG + P V +MGHSSGAH+++L A N + + V IG +GVYD+ + + E GVHE+SPM A+NG + YS
Sbjct: 17 YGPHEKQVAQVMI----SQKAQEAEMTNGKAAP-LLLFLHGGAWGSGFATMYRLLSLPFLKR-------NYRVVILGYRTYPDATIEGQVDDLVQAVEVFTNKYRGVGGNSGP-VTVMGHSSGAHVTML---------------AAMNGRLSSS-------------------------------SVNALIGASGVYDIEKQFQQEKKIGVHEMSPMSAANGASVENFRKYS 189 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1137.1203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1137.1203.1 >prot_L-elsbetiae_contig1137.1203.1 ID=prot_L-elsbetiae_contig1137.1203.1|Name=mRNA_L-elsbetiae_contig1137.1203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=385bp MYRLMVDRLARPDRPQLGSYTVASVGYRVHPDADTVGQVNDLAKAMRWISback to top mRNA from alignment at L-elsbetiae_contig1137:1774..8348+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1137.1203.1 ID=mRNA_L-elsbetiae_contig1137.1203.1|Name=mRNA_L-elsbetiae_contig1137.1203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6575bp|location=Sequence derived from alignment at L-elsbetiae_contig1137:1774..8348+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1137:1774..8348+ >mRNA_L-elsbetiae_contig1137.1203.1 ID=mRNA_L-elsbetiae_contig1137.1203.1|Name=mRNA_L-elsbetiae_contig1137.1203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2310bp|location=Sequence derived from alignment at L-elsbetiae_contig1137:1774..8348+ (Laminarionema elsbetiae ELsaHSoW15)back to top |