mRNA_L-elsbetiae_contig11360.1197.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: D7FQB7_ECTSI (UDG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB7_ECTSI) HSP 1 Score: 238 bits (608), Expect = 5.780e-73 Identity = 124/184 (67.39%), Postives = 135/184 (73.37%), Query Frame = 1
Query: 1 GFSIPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAAIKTETDDGYPKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQSGKEWT--RHQQS 546
GFSIPGTVSSEFGKKELHSWR GFY RL AHAERAAATVA + + AA IK + +DG P+I+AFAGKRQWEELFFDASAK KA+TKGGK G FRFGLQPA LRPPGWPFP ERTE+FVVPSSSGAAAMT+EARE PYR LG H+ +SG EWT R QQS
Sbjct: 142 GFSIPGTVSSEFGKKELHSWRRGFYDRLTAHAERAAATVAASKSYPAEPATERGTDSTSAAGKGADQGVATAATIKAKIEDGCPRIIAFAGKRQWEELFFDASAKDKAKTKGGKTGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHRRGQQS 325
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: A0A383VAW5_TETOB (UDG domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAW5_TETOB) HSP 1 Score: 95.5 bits (236), Expect = 1.320e-18 Identity = 58/172 (33.72%), Postives = 80/172 (46.51%), Query Frame = 1
Query: 1 GFSIPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAAIKTETDDGYPKIVAFAGKRQWEELF-FDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQ 513
G PGT SS F + WR+ FY RL AH + A+ ++ G P++VAF GKR + EL DAS + + + A GLQP PPGWP P ++TE++V+ S+SGAA M+++ARE PYR L L+Q
Sbjct: 188 GSGQPGTDSSLFTAADFQGWRAAFYARLAAHMKAASDSIGCSCGRC-----------------------------------GAPRLVAFTGKRHYLELLNLDASGQQRRGKDRVASAAVTLGLQPQQQLPPGWPLPADKTEVWVLTSTSGAAPMSNQAREAPYRQLAQRLAQ 324
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: C1EDR1_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EDR1_MICCC) HSP 1 Score: 92.8 bits (229), Expect = 6.910e-18 Identity = 62/181 (34.25%), Postives = 84/181 (46.41%), Query Frame = 1
Query: 7 SIPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAAIKTETDDGYPKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQSGKEWTRHQQSG 549
++PG + + + + WRS Y RL H R A E+ R R + +I + P +VAF+GKRQ+ +LF ++V A G QP PPGWP PERTE++V+PSSSG AAMT EAREGP+ LG L+ W R + G
Sbjct: 155 TVPGNDAGAYNRATMKKWRSDLYARLRGHVARCADASGD---------------------EDARVGHRSSMSIASRHG---PDVVAFSGKRQYAQLFDAVPSRVDA------------GRQPPESLPPGWPLCPERTEVWVMPSSSGRAAMTREAREGPWVELGTRLATI--PWPRAEYRG 297
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: C1MXW2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MXW2_MICPC) HSP 1 Score: 83.2 bits (204), Expect = 4.440e-14 Identity = 59/174 (33.91%), Postives = 76/174 (43.68%), Query Frame = 1
Query: 13 PGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAAIKTETDDGYPKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQSGKEWTR 534
PG ++ +G+ + WR Y RL H RA+ T AAA P +VAFAGKRQ+ +LF +V+ G QP PP WPF + TE++V+PSSSG AAMT EARE PY LG L++ EW R
Sbjct: 239 PGNDANAYGRAVMKEWREDLYARLRGHLCRASGRAIGGEEGDVADEIDDAAKTWRAT----------AAAFG-------PSVVAFAGKRQYAQLFDTIPKRVEV------------GKQPPGSLPPRWPFCEDATEVWVLPSSSGRAAMTREARETPYLELGARLAEV--EWPR 381
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: W7TJD2_9STRA (Uracil-dna glycosylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJD2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.400e-13 Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 250 PKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQ 513
PKIVAF GKRQ+ ELFFD+ A K+ + +GLQ A RP G+PF + T+LFV+ SSSGAAAM++ ARE PY+ L + L Q
Sbjct: 307 PKIVAFTGKRQFRELFFDSKAY--------KSISISYGLQSA--RPDGFPFNADETKLFVLTSSSGAAAMSNAAREMPYQELAELLKQ 384
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: A0A4D9CYU0_9STRA (UDG domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYU0_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 9.330e-13 Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 250 PKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQ 513
PKIVAF GKRQ+ ELFFD+ A K+ + +GLQ A RP G+PF T+LFV+ SSSGAAAM++ ARE PY+ L L Q
Sbjct: 204 PKIVAFTGKRQFRELFFDSKAY--------KSISISYGLQSA--RPDGFPFNANETKLFVLTSSSGAAAMSNAAREMPYQELAQLLKQ 281
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: A0A836CAH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH3_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.890e-12 Identity = 81/188 (43.09%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 1 GFSIPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAA-------------IKTETDD--------GYPKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVV--PSSSGAAAMTSEAREGPYRAL 495
G PGT S+ F + L +WR+G + RL H RA XXXXXXXXXXXXXXXXXXXX +K E +D GYP ++AF GKRQW ELFF + + +A K +GLQ A RPP WPFPP VV SSSGA+A+++EAR PYR L
Sbjct: 175 GHDCPGTNSAAFKRDVLRTWRAGLFERLRGHVRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLEMEDAAAAPERLGYPHVIAFTGKRQWRELFF-GTPEAEALAK-----KVDYGLQQA--RPPDWPFPPPPNGPLVVVLASSSGASALSNEARIAPYRLL 354
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: A0A7S3DHX7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DHX7_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 1.630e-11 Identity = 59/185 (31.89%), Postives = 88/185 (47.57%), Query Frame = 1
Query: 7 SIPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAR----EAAAIKTETDDGYPKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHLSQSGKEWTRHQQSG 549
++PG ++ + K + W RL H R +T+ + E +RE+ R E A+I E + P +VAF GKRQ+ ++F +K G Q TL PPGWPFPP TE++V+PSSSG A M++EAR PY+ LG+ ++ W R ++ G
Sbjct: 233 TVPGNDAAAYDKATMKKWAVDLNKRLNNHLCRVRSTILTIQQRA--------------SRERERESGRDEREEEASICVEAEAIAPAVVAFTGKRQFCQMFSPPLSKCS------------HGKQ-QTL-PPGWPFPPT-TEVWVLPSSSGRAVMSNEARLEPYKQLGERIASI--PWPRVRKDG 386
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: A0A6A3V7X5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3V7X5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.480e-11 Identity = 56/177 (31.64%), Postives = 80/177 (45.20%), Query Frame = 1
Query: 13 PGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAAIKTETDD--------GY-PKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPER-TELFVVPSSSGAAAMTSEAREGPYRALGDHLSQ 513
PG +S++GK+ + +WR F+ RL HA + + A AIK E DD G+ P ++AF+GKRQ+ LF +K++ R+G Q T PPGWP +E++V+PSSSG AAMT+ R PY L + L Q
Sbjct: 162 PGNDASKYGKRTMEAWRDSFFLRLRRHAAQVCLN-------------------------DHSNTADTGTAIKHEADDDDISQCKLGHAPMLIAFSGKRQFSWLFSPPLSKIE-----------RYGKQ--TRLPPGWPHELRADSEVWVLPSSSGRAAMTTAQRTLPYEQLAERLHQ 300
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Match: A0A7S4L8Y2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L8Y2_GUITH) HSP 1 Score: 72.0 bits (175), Expect = 4.180e-11 Identity = 69/166 (41.57%), Postives = 86/166 (51.81%), Query Frame = 1
Query: 10 IPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAXXXXXXXXXXXXXXXXXXXXTPEEDREAAREAAAIKTETDDGYPKIVAFAGKRQWEELFFDASAKVKAQTKGGKNGAFRFGLQPATLRPPGWPFPPERTELFVVPSSSGAAAMTSEAREGPYRALGDHL 507
PG+ ++EFG + WR FY R AH R + + XXXXXXXXXXXXXXXX E + + E D P+IVAF GKR + LF KV + +G Q L PP WPFP TE++++PS SG AAM+S RE PY L L
Sbjct: 62 FPGSDAAEFGHDVMLQWREDFYKRARAHLHRCCSVLKNGEEXXXXXXXXXXXXXXXXXXXXQEEFSAD------ELDRMAPRIVAFTGKRHYSMLFQPQLKKVDS-----------YGKQ--DLLPPRWPFPAS-TEVWILPSPSGRAAMSSADREAPYLELSQRL 207 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11360.1197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11360.1197.1 >prot_L-elsbetiae_contig11360.1197.1 ID=prot_L-elsbetiae_contig11360.1197.1|Name=mRNA_L-elsbetiae_contig11360.1197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp GFSIPGTVSSEFGKKELHSWRSGFYTRLLAHAERAAATVAAASPAAAAVEback to top mRNA from alignment at L-elsbetiae_contig11360:3589..4936- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11360.1197.1 ID=mRNA_L-elsbetiae_contig11360.1197.1|Name=mRNA_L-elsbetiae_contig11360.1197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1348bp|location=Sequence derived from alignment at L-elsbetiae_contig11360:3589..4936- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11360:3589..4936- >mRNA_L-elsbetiae_contig11360.1197.1 ID=mRNA_L-elsbetiae_contig11360.1197.1|Name=mRNA_L-elsbetiae_contig11360.1197.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1122bp|location=Sequence derived from alignment at L-elsbetiae_contig11360:3589..4936- (Laminarionema elsbetiae ELsaHSoW15)back to top |