mRNA_L-elsbetiae_contig11360.1196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: D7FQB8_ECTSI (Folate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB8_ECTSI) HSP 1 Score: 145 bits (365), Expect = 3.020e-41 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKASGVRPYSGLI 276
GLGP+LLGNAVAWGGFFYCYE IK + +V P +LG VHHLGAGYVAGAMMVLATNPVWMIKTRMQLQD+ AK+ GVRPYSGL+
Sbjct: 101 GLGPALLGNAVAWGGFFYCYEKIKTAIRARV------PQEADLGAVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDKKAKSGGVRPYSGLM 186
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A836CHG8_9STRA (Folate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG8_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.070e-21 Identity = 47/95 (49.47%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRN----AKASGVRPYSGL 273
GLGP++LG+ V+WGG+FY YE K + D +LGPVHHL AG AG +VL TNP+W++KTRMQLQ A+G RPY+GL
Sbjct: 59 GLGPAVLGSGVSWGGYFYLYEWAKTSM-------RRFSDTEKLGPVHHLTAGMAAGNALVLLTNPIWLVKTRMQLQQXXXXXXTAAAGRRPYTGL 146
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A7S4D5I4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5I4_HETAK) HSP 1 Score: 89.7 bits (221), Expect = 3.170e-20 Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKASGVRPYSGLI 276
G+GP+LLG+ V+WGG+FYCYE+ K R + LG HHL A AGA++VL TNP+W+IKTR+QLQ R A Y+G +
Sbjct: 113 GMGPALLGSGVSWGGYFYCYENAKKR-------YRGGGGAQRLGAGHHLLAAAEAGALLVLLTNPIWLIKTRLQLQVREGGARAGHHYAGPL 197
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A7S2XN66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN66_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.230e-16 Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIE--LGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKA-------SGVRPYSGL 273
GL P+L+G+A +WGG+F+ YE +K + + + AS D E LG + + GA AGA+MVL TNPVW+IKTRMQLQ +N S RPY+ +
Sbjct: 75 GLAPALIGSAASWGGYFFLYEGMKKEM-LHLKHEASPHDETEHKLGALENFGAACSAGAVMVLLTNPVWLIKTRMQLQMKNVMKERERDGLSMKRPYNNM 173
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A7S2R9Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9Z5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.210e-15 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKAS 249
GL +L G+ ++WGG+F+ YE K R +++T P+HHL A AG +MV TNP+W++KTRMQLQ R A+ +
Sbjct: 8 GLPAALYGSGISWGGYFFFYEIAKER-------WSTTGGPSTQNPLHHLAAATEAGVIMVFLTNPIWLVKTRMQLQKRVAQTA 83
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A7S2D787_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D787_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.660e-15 Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKASGVRPYSGL 273
GL + G+A+AWGG+F+ YE K+R G S+ +G L P +HL A +GA++VL TNP+W++KTRMQLQ + A R Y +
Sbjct: 31 GLSAGMYGSAIAWGGYFWLYEHAKIRWGRFS---ESSSEG--LAPGYHLLAAAESGAILVLLTNPIWLVKTRMQLQQQVAGVGNSRVYRSV 116
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A2P6NXC1_9EUKA (B30.2/SPRY domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXC1_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 6.280e-15 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNA---KASGVRPYSGLIGVSH 288
GL P+L+G + AWG +F+ Y K ++ AS+ ++L P HL AG+ AG + TNP+W++KTR+QLQ ++ K SGV GL GV+H
Sbjct: 939 GLTPNLIGASSAWGLYFWAYTLAKDQMISSQKSDASSSGTVQLSPTQHLLAGFQAGTFTAIVTNPIWVVKTRIQLQQKSGNHGKYSGVT-VPGLFGVTH 1036
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A6A7G9W9_9CRUS (Mitochondrial folate transporter/carrier n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9W9_9CRUS) HSP 1 Score: 76.3 bits (186), Expect = 2.330e-14 Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKASGVRPYSGLI 276
G+ P+L+G+ VAWG +F Y ++K+++ + G EL HHL AG ++G V+ TNP+WM+KTR+QLQ + ++ VR Y+G+
Sbjct: 91 GVLPNLVGSGVAWGTYFLIYSNLKIQIRKNLTA------GKELSSRHHLLAGVLSGMGTVIITNPIWMVKTRLQLQSKFYSSANVR-YNGMF 175
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A5A8DY18_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DY18_CAFRO) HSP 1 Score: 75.5 bits (184), Expect = 3.620e-14 Identity = 35/94 (37.23%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDG--IELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKASGVRPYSGLI 276
G+ P + G+ ++WG +F+ YE +K + V AS+ DG +LGP H+ +G V+ TNPVW++KTR+QLQ PYSG++
Sbjct: 71 GVVPGMAGSGLSWGLYFFFYERLKAKARVWA---ASSADGDSAKLGPAAHMACAMASGCATVMFTNPVWLVKTRLQLQLAAHSPGSPAPYSGMV 161
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Match: A0A3P3YKX1_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YKX1_PLABS) HSP 1 Score: 75.1 bits (183), Expect = 7.850e-14 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 1 GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGAGYVAGAMMVLATNPVWMIKTRMQLQDRNAKASGVRPYSGLI 276
GL P+L+G+ VAWG +F Y K R+ V+ PD LGP+HHL + VAG TNP+WM+KTR+QLQ R+ A+ Y+G++
Sbjct: 133 GLWPNLVGSGVAWGAYFGFYNIAK-RLWVE----HRGPDQ-PLGPLHHLSSAAVAGVATCFLTNPIWMVKTRLQLQFRSGNANS-HDYTGMV 217 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11360.1196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11360.1196.1 >prot_L-elsbetiae_contig11360.1196.1 ID=prot_L-elsbetiae_contig11360.1196.1|Name=mRNA_L-elsbetiae_contig11360.1196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp GLGPSLLGNAVAWGGFFYCYESIKVRVGVQVCCFASTPDGIELGPVHHLGback to top mRNA from alignment at L-elsbetiae_contig11360:864..1472+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11360.1196.1 ID=mRNA_L-elsbetiae_contig11360.1196.1|Name=mRNA_L-elsbetiae_contig11360.1196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=609bp|location=Sequence derived from alignment at L-elsbetiae_contig11360:864..1472+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11360:864..1472+ >mRNA_L-elsbetiae_contig11360.1196.1 ID=mRNA_L-elsbetiae_contig11360.1196.1|Name=mRNA_L-elsbetiae_contig11360.1196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig11360:864..1472+ (Laminarionema elsbetiae ELsaHSoW15)back to top |