mRNA_L-elsbetiae_contig11358.1192.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11358.1192.1
Unique NamemRNA_L-elsbetiae_contig11358.1192.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: A0A6H5JLG2_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG2_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 5.240e-45
Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 1 
Query:    1 RLLKATSNSGYGG-ADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            RLL   ++ G+GG AD+SR TY AI+ADI +    S+DFWPADFGNYGPL IRLAWHCAGSYR+SDGRGGCDGGRIRFFPEHGW DNTNLDK 
Sbjct:   41 RLLSGNNDHGHGGGADYSRETYEAIQADIVSMFVDSKDFWPADFGNYGPLFIRLAWHCAGSYRASDGRGGCDGGRIRFFPEHGWADNTNLDKA 133
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: D8LN39_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN39_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 3.610e-42
Identity = 70/93 (75.27%), Postives = 77/93 (82.80%), Query Frame = 1 
Query:    1 RLLKATSNSGY-GGADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            RLL    + G+ GGAD+SR TY AI+ADI +    S+DFWPADFGNYGPL IRLAWHCAGSYR+SDGRGGCDGGRIRFFPEHGW DNTNLDK 
Sbjct:  103 RLLSGDHDDGHEGGADYSRETYEAIQADIVSMFVDSKDFWPADFGNYGPLFIRLAWHCAGSYRASDGRGGCDGGRIRFFPEHGWADNTNLDKA 195
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BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: D7G7J0_ECTSI (Catalase is an enzyme, present in all aerobic cells, that decomposes hydrogen peroxide to molecular n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J0_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 5.010e-42
Identity = 72/93 (77.42%), Postives = 79/93 (84.95%), Query Frame = 1 
Query:    1 RLLKATSNSGYG-GADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            RLL  +++SGY  GAD+SR TY AI+ADI A    S+DFWPADFGNY PLMIRLAWHCAGSYR+SDGRGGCDGGRIRFFPEHGW DNTNLDK 
Sbjct:   44 RLL--STDSGYEEGADYSRETYEAIKADILAVFVDSKDFWPADFGNYAPLMIRLAWHCAGSYRNSDGRGGCDGGRIRFFPEHGWADNTNLDKA 134
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BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: D7G524_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G524_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.860e-40
Identity = 67/94 (71.28%), Postives = 73/94 (77.66%), Query Frame = 1 
Query:    1 RLLKATSNSGYGG--ADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            R L++  +S Y G  ADFSR TY A++ADI A  T SQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  W DNTNLDK 
Sbjct:   43 RALRSYDDSYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKA 136
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: A0A6H5J7C7_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C7_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.590e-39
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 1 
Query:   22 NSGYGGADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            +S YGGADFSR TY A++ DI A  T+S +FWPADFGNY PLMIRLAWHC+G+YR SDGRGGCDGGRIRF PE  W DN NLDK 
Sbjct:   52 SSYYGGADFSRETYEALQEDITAMFTNSMEFWPADFGNYAPLMIRLAWHCSGTYRQSDGRGGCDGGRIRFNPERSWADNINLDKA 136
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: D7G6M6_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M6_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 9.340e-39
Identity = 67/94 (71.28%), Postives = 73/94 (77.66%), Query Frame = 1 
Query:    1 RLLKATSNSGYGG--ADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            R L++  +S Y G  ADFSR TY A++ADI A  T SQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  W DNTNLDK 
Sbjct:   43 RALRSYDDSYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKA 136
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: D7G523_ECTSI (PEROXIDASE_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G523_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 6.960e-38
Identity = 67/94 (71.28%), Postives = 73/94 (77.66%), Query Frame = 1 
Query:    1 RLLKATSNSGYGG--ADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            R L++  +S Y G  ADFSR TY A++ADI A  T SQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  W DNTNLDK 
Sbjct:   43 RALRSYDDSYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKA 136
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: A0A6H5JXZ4_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ4_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.880e-37
Identity = 67/94 (71.28%), Postives = 72/94 (76.60%), Query Frame = 1 
Query:    1 RLLKATSNSGYGG--ADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKV 276
            R L +  +S Y G  ADFSR TY A++ADI A  T SQDFWPADFGNY PLMIRLAWHC G+YR SDGRGGCDGGRIRF PE  W DNTNLDK 
Sbjct:   43 RALGSYDDSYYSGSGADFSRETYEALQADITAVFTDSQDFWPADFGNYAPLMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDKA 136
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: A0A6H5JB31_9PHAE (KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB31_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 3.820e-37
Identity = 64/93 (68.82%), Postives = 70/93 (75.27%), Query Frame = 1 
Query:    1 RLLKATSN--SGYGGADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDK 273
            R L ++S+  S   GADFS  TY A++ADI A  T SQDFWPADFGN  P MIRLAWHC G+YR SDGRGGCDGGRIRF PE  W DNTNLDK
Sbjct:   65 RALMSSSSYDSSSSGADFSSETYQALQADITAMFTESQDFWPADFGNNVPFMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDK 157
[Close]
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Match: D7FTZ8_ECTSI (Catalase decomposes hydrogen peroxide to molecular oxygen and water n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ8_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.050e-37
Identity = 65/94 (69.15%), Postives = 71/94 (75.53%), Query Frame = 1 
Query:    1 RLLKATSNS---GYGGADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLMIRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDK 273
            R L ++S+S     GGADFS  TY A++ADI    T SQDFWPADFGNY P MIRLAWHC G+YR SDGRGGCDGGRIRF PE  W DNTNLDK
Sbjct:   41 RALMSSSSSYDSSSGGADFSSETYQALQADITTMFTDSQDFWPADFGNYAPFMIRLAWHCNGNYRQSDGRGGCDGGRIRFNPERSWADNTNLDK 134
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11358.1192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLG2_9PHAE5.240e-4575.27KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LN39_ECTSI3.610e-4275.27Catalase is an enzyme, present in all aerobic cell... [more]
D7G7J0_ECTSI5.010e-4277.42Catalase is an enzyme, present in all aerobic cell... [more]
D7G524_ECTSI1.860e-4071.28Catalase decomposes hydrogen peroxide to molecular... [more]
A0A6H5J7C7_9PHAE1.590e-3972.94KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G6M6_ECTSI9.340e-3971.28Catalase decomposes hydrogen peroxide to molecular... [more]
D7G523_ECTSI6.960e-3871.28PEROXIDASE_4 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JXZ4_9PHAE1.880e-3771.28KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JB31_9PHAE3.820e-3768.82KatG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FTZ8_ECTSI8.050e-3769.15Catalase decomposes hydrogen peroxide to molecular... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11358contigL-elsbetiae_contig11358:131..1077 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.8
Seed ortholog evalue2.1e-32
Seed eggNOG ortholog2880.D7G523
Preferred namekatG
KEGG rclassRC00034,RC00213,RC00767,RC02141
KEGG koko:K03782
KEGG ReactionR00602,R00698,R02596,R02670,R03919,R04007,R07443,R11906
KEGG Pathwayko00360,ko00380,ko00940,ko00983,ko01100,ko01110,map00360,map00380,map00940,map00983,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019953,GO:0020037,GO:0022414,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034599,GO:0034605,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042594,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0071496,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748
EggNOG free text desc.catalase activity
EggNOG OGs2QTDY@2759,COG0685@1
EC1.11.1.21
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons3
Model size288
Cds size288
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11358.1192.1prot_L-elsbetiae_contig11358.1192.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11358 131..1077 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815344.6604598-CDS-L-elsbetiae_contig11358:130..1971622815344.6604598-CDS-L-elsbetiae_contig11358:130..197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11358 131..197 -
1691682851.2477746-CDS-L-elsbetiae_contig11358:130..1971691682851.2477746-CDS-L-elsbetiae_contig11358:130..197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11358 131..197 -
1622815344.6731668-CDS-L-elsbetiae_contig11358:530..5761622815344.6731668-CDS-L-elsbetiae_contig11358:530..576Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11358 531..576 -
1691682851.2695527-CDS-L-elsbetiae_contig11358:530..5761691682851.2695527-CDS-L-elsbetiae_contig11358:530..576Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11358 531..576 -
1622815344.6830986-CDS-L-elsbetiae_contig11358:902..10771622815344.6830986-CDS-L-elsbetiae_contig11358:902..1077Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11358 903..1077 -
1691682851.2799237-CDS-L-elsbetiae_contig11358:902..10771691682851.2799237-CDS-L-elsbetiae_contig11358:902..1077Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11358 903..1077 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11358.1192.1

>prot_L-elsbetiae_contig11358.1192.1 ID=prot_L-elsbetiae_contig11358.1192.1|Name=mRNA_L-elsbetiae_contig11358.1192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp
RLLKATSNSGYGGADFSRGTYGAIRADIEAALTHSQDFWPADFGNYGPLM
IRLAWHCAGSYRSSDGRGGCDGGRIRFFPEHGWPDNTNLDKVGKE*
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mRNA from alignment at L-elsbetiae_contig11358:131..1077-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11358.1192.1 ID=mRNA_L-elsbetiae_contig11358.1192.1|Name=mRNA_L-elsbetiae_contig11358.1192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=947bp|location=Sequence derived from alignment at L-elsbetiae_contig11358:131..1077- (Laminarionema elsbetiae ELsaHSoW15)
CGCCTCCTGAAGGCCACAAGCAACAGTGGCTATGGAGGGGCGGATTTCTC
CAGAGGGACGTACGGCGCTATTCGAGCTGATATCGAAGCCGCGCTCACCC
ACTCCCAAGACTTCTGGCCCGCAGATTTCGGAAACTACGGGCCCCTGATG
ATTCGCCTCGCGTGGCACTGCGCCGGTGAGATACAGACGACGGCGAAATT
TTGCTGTGTTTGGTGTTTCATCCGTATGCATACCATCTCGTGCGATATTT
CATAATCTCCTTCTCCTATATCTTGCGTCTTCCATTGTTCCGCTTGATGC
CCCATGTCTATTTTGTGACTTGTCCACCGCTCAGCCGAGTTTGGGTAGAA
GCCATAACCGTTCCTCTGCCCACCGTATTGGCGGCTTCAGGGCGCAAGAT
AAATGTCGGGGCATGCAGCAGGTGTCATTAGTCTACTCTGTACATCCAGC
TCCAGAGGTCCTCAAACCCAAGCATGAACCGATGCATTCGTTCACCCGCA
GGGAGCTACCGCTCGTCCGACGGGCGCGGAGGCTGCGACGGTGGCAGGTA
GGCTGTCTCAAGCGTGAAACGATGTCAAATGGGTTTGCGGGCGGTGCTAC
GTACCTACGCATTTAAGCGTGAAACGCTCAGGGAGGGGACGGTTCGTGTT
TTTCCCAAGCTACGATCATGGCACGTGTACATAAAGCAACATTCTTCTCC
GGTCGAGAAGCCCTACGATACGCTGTCTTGTACATTTTCCTGTACCAAAC
AATCAGACGATCCTCCTTTTTTGCATCATCGAGCACGTGTTGGCAGTCCG
GGTTCGTTTCCGCTTTGCTCTCGCCCCCCGTATATTTGTTATCATCTCCT
CTATTCCTCTCCATCTCCTCTCACTTTCAGGATTCGCTTCTTCCCCGAAC
ACGGCTGGCCCGACAACACCAACCTGGATAAGGTGGGAAAGGAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11358:131..1077-

>mRNA_L-elsbetiae_contig11358.1192.1 ID=mRNA_L-elsbetiae_contig11358.1192.1|Name=mRNA_L-elsbetiae_contig11358.1192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig11358:131..1077- (Laminarionema elsbetiae ELsaHSoW15)
CGCCTCCTGAAGGCCACAAGCAACAGTGGCTATGGAGGGGCGGATTTCTC
CAGAGGGACGTACGGCGCTATTCGAGCTGATATCGAAGCCGCGCTCACCC
ACTCCCAAGACTTCTGGCCCGCAGATTTCGGAAACTACGGGCCCCTGATG
ATTCGCCTCGCGTGGCACTGCGCCGCGCCTCCTGAAGGCCACAAGCAACA
GTGGCTATGGAGGGGCGGATTTCTCCAGAGGGACGTACGGCGCTATTCGA
GCTGATATCGAAGCCGCGCTCACCCACTCCCAAGACTTCTGGCCCGCAGA
TTTCGGAAACTACGGGCCCCTGATGATTCGCCTCGCGTGGCACTGCGCCG
GGAGCTACCGCTCGTCCGACGGGCGCGGAGGCTGCGACGGTGGCAGGGAG
CTACCGCTCGTCCGACGGGCGCGGAGGCTGCGACGGTGGCAGGATTCGCT
TCTTCCCCGAACACGGCTGGCCCGACAACACCAACCTGGATAAGGTGGGA
AAGGAGTGAGATTCGCTTCTTCCCCGAACACGGCTGGCCCGACAACACCA
ACCTGGATAAGGTGGGAAAGGAGTGA
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