mRNA_L-elsbetiae_contig1135.1187.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: A0A6H5JUA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA4_9PHAE) HSP 1 Score: 493 bits (1269), Expect = 3.780e-173 Identity = 241/294 (81.97%), Postives = 262/294 (89.12%), Query Frame = 1
Query: 1 MPSFWQELAGGTVGGVVGMSVVYPLDTVKSRLQTSGHSRYGSIAGVLSSMARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADKNDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDFLDARPR 882
MPS WQELAGGT GGV+GM+VVYPLDT+KSRLQTSG SRY SI+ VL+SMAR EG +SLYRGLLSPV GYGAMFA+SFSSYGYAGRFLLR+R A D +TLPE G+AGAWAGVMNAP+RQVFERVKGVMQVR+GK+L SPYSWSGACVVDLVRREGVAMGL RGMGATMLREP+QF IYYPSYEIAK YLLPPDRTST VPE L LAGG+AGC +WLPP YCLDVIKTRMQTA+ GVYRGV DCL+KT+RA G+ VLFRG GA+MLRAFPMHGLVFLGYETTID L ARPR
Sbjct: 1 MPSLWQELAGGTAGGVIGMTVVYPLDTIKSRLQTSGRSRYSSISNVLTSMARKEGTLSLYRGLLSPVVGYGAMFAVSFSSYGYAGRFLLRRREAKATDELTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGVAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYLLPPDRTSTAVPEPMLLALAGGLAGCVMWLPPTYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPR 294
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: D7FM07_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM07_ECTSI) HSP 1 Score: 350 bits (897), Expect = 9.110e-118 Identity = 168/208 (80.77%), Postives = 185/208 (88.94%), Query Frame = 1
Query: 259 FLLRQRGADKNDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDFLDARPR 882
FLLR+R A D++TLPE G+AGAWAGVMNAP+RQVFERVKGVMQVR+GK+L SPYSWSGACVVDLVRREG+AMGL RGMGATMLREP+QF IYYPSYEIAK Y LPPDRTST VPE L LAGG+AGC +WLPP+YCLDVIKTRMQTA+ GVYRGV DCL+KT+RA G+ VLFRG GA+MLRAFPMHGLVFLGYETTID L ARPR
Sbjct: 12 FLLRRREAKATDKLTLPEKGIAGAWAGVMNAPMRQVFERVKGVMQVRQGKKLQSPYSWSGACVVDLVRREGIAMGLCRGMGATMLREPLQFGIYYPSYEIAKDYFLPPDRTSTAVPEPILLALAGGLAGCVMWLPPIYCLDVIKTRMQTAEPGVYRGVRDCLMKTLRAEGMPVLFRGLGAAMLRAFPMHGLVFLGYETTIDLLGARPR 219
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: D7FLY9_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY9_ECTSI) HSP 1 Score: 310 bits (793), Expect = 1.140e-101 Identity = 165/251 (65.74%), Postives = 184/251 (73.31%), Query Frame = 1
Query: 148 MARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADK----NDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTH----VPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDFLDAR 876
MA EG+MS YRGLLSPVAGYGAMFA+SFSSYG A RFL R + + L E AG +AG MN+P R VF+RVK VMQVR G A+PYSWSGAC DLVRREGV GLFRG+ +TMLRE +Q AIYYPSYE+ K L R ST VPE ALQ+LAGG+AGCA WLPPVYCLDVIKTR+Q+A+ GVY G WDCL KTVR+ G VLFRG G SMLRAFPMHGLVF+GYETTI L R
Sbjct: 1 MAAHEGLMSWYRGLLSPVAGYGAMFAVSFSSYGMASRFLQRXXXXXXXXXXSGEVFLWEKSAAGFFAGAMNSPFRTVFDRVKTVMQVRVGNGRAAPYSWSGACAADLVRREGVMSGLFRGIESTMLREMLQCAIYYPSYEVTKDLLA---RRSTSGKSSVPEPALQMLAGGIAGCATWLPPVYCLDVIKTRLQSAEPGVYGGTWDCLRKTVRSEGTPVLFRGLGLSMLRAFPMHGLVFVGYETTIGLLTTR 248
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: A0A836C8G7_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G7_9STRA) HSP 1 Score: 259 bits (661), Expect = 7.420e-82 Identity = 131/234 (55.98%), Postives = 165/234 (70.51%), Query Frame = 1
Query: 166 VMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADKNDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDFL 867
V SLYRGL SPV GYG +FA+SFS+ G A R+L + G N ++ EM LAGAWAG + AP RQVFERVKGVMQVR G +PYSWSGAC+VDLVR EGV MGLFRGMG+ +RE QFA+YYP+Y++AK +LP D H+ + +LAGG+AG WLPP+Y +DV+KT++QTA G Y+ + D KTV G + LFRG G S++RAFP+H +F GYE T+ L
Sbjct: 18 VKSLYRGLASPVLGYGVLFAMSFSANGQALRYLRNRDGRAANAPASVAEMTLAGAWAGAVQAPARQVFERVKGVMQVRNGAGGKAPYSWSGACLVDLVRTEGVQMGLFRGMGSQFIREVPQFALYYPAYDVAKRAILPADG---HISPIHM-LLAGGIAGTVQWLPPIYNIDVLKTKIQTAAPGTYKSIADAARKTVATEGTKGLFRGLGPSLVRAFPLHATIFAGYELTMAHL 247
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: W7TE76_9STRA (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE76_9STRA) HSP 1 Score: 237 bits (605), Expect = 4.140e-73 Identity = 128/259 (49.42%), Postives = 161/259 (62.16%), Query Frame = 1
Query: 148 MARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADKNDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELAS--PYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLP--------------------PDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTI 858
M R G+ SLYRGLLSP AG+G FAISF+ YG RF R D +TL EM +GAWAG++ +P RQ+FER+K VMQVR+ A PY WSG C+V LVR+EG+ GLFRG+ AT LRE QFA+YYP YE+ L +ST +P L +LAGGVAG WLPP YCLDV+K+RMQ+A GVY VWDC K+ + G+ V FRG +++RAFP++ +FLGYETT+
Sbjct: 1 MVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFF---RKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLVQLVRKEGLYNGLFRGLDATALREVPQFAVYYPLYEMNVRALQKMMAASNASGSSXNESNIVHRKPSSSTPLPPHLL-LLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTL 255
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: K8Z8A3_NANGC (Mitochondrial carrier family n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8A3_NANGC) HSP 1 Score: 231 bits (589), Expect = 1.730e-70 Identity = 133/286 (46.50%), Postives = 172/286 (60.14%), Query Frame = 1
Query: 10 FWQELAGGTVGGVVGMSVVYPLDTVKSRLQTSGHSRYGSIAGVLSSMARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADKNDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELAS--PYSWSGACVVDL-VRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTI 858
F EL GTVGGVVG+++++PLDT K RLQ H Y V+ SM R G+ SLYRGLLSP AG+G FAISF+ YG RF R D +TL EM +GAWAG++ +P RQ+FER+K VMQVR+ A PY WSG C+ ++ VR M G++ S E + P +ST +P L +LAGGVAG WLPP YCLDV+K+RMQ+A GVY VWDC K+ + G+ V FRG +++RAFP++ +FLGYETT+
Sbjct: 7 FVHELLAGTVGGVVGITLIFPLDTAKVRLQAYPH--YKGPIDVIRSMVREGGISSLYRGLLSPQAGFGVTFAISFAGYGQGTRFF---RKGDNKRELTLGEMTASGAWAGLLQSPARQIFERIKSVMQVRKAAGGADKPPYRWSGECLYEMNVRALQKMMAASNASGSS-------------SNESNIVHRKP--SSSTPLPPHLL-LLAGGVAGTVQWLPPFYCLDVLKSRMQSALPGVYDNVWDCAKKSYQQEGIGVFFRGLPVALIRAFPLNACIFLGYETTL 271
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: A0A7S1G657_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G657_9STRA) HSP 1 Score: 190 bits (482), Expect = 9.220e-54 Identity = 115/278 (41.37%), Postives = 161/278 (57.91%), Query Frame = 1
Query: 13 WQELAGGTVGGVVGMSVVYPLDTVKSRLQTSGHSRYGSIAGVLSSMARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADK----NDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLV 834
W+ G GV G++VVYPLDT K RLQT Y L ++ + EG +LYRG+ +P+AGYGA+ ++ S+YG +LR+R A+ + +++ E AGA AGV++ LR ERVK VMQVRR + + S C+V +R EG+ + F AT+LRE Q Y+P++EI K L P +S + L ++AGGVAG WLPP+YC+DV+K+RM+ AG GV L +V G VL RG G +M+RAFPMH +
Sbjct: 50 WKRGVSGLTAGVSGLTVVYPLDTTKLRLQTCP-GEYKGAFDCLRTVVKREGFAALYRGMSAPIAGYGAINSLLLSTYGMTA-VVLRRRNAEAAGGVDRELSMEESMAAGAVAGVVSTVLRAPVERVKAVMQVRRNPDGTKVFRNSWRCLVGTMRTEGL-LSPFAAGRATLLRELFQGVAYFPAFEITKRALTPAGGSSNDLDFWRL-LIAGGVAGITQWLPPMYCIDVVKSRMEVPPAGSTPGVLGVLRASVAKEGGMVLLRGMGPAMVRAFPMHATI 323
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: A0A0D2VZ19_CAPO3 (Solute carrier family 25 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ19_CAPO3) HSP 1 Score: 184 bits (467), Expect = 3.990e-51 Identity = 119/309 (38.51%), Postives = 167/309 (54.05%), Query Frame = 1
Query: 16 QELAGGTVGGVVGMSVVYPLDTVKSRLQTS--GHSRYGSIAGVLSSMARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQR-----GADKNDRMTLP------EMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAK-AYLLPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGV------------YRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDF 864
Q L GGTVGG++G+ YP DTVK R+QT G + Y + + +SEG ++LY G+LSPV G + A+ F SYG ++LL ++ G+++ + P E LA AG++ + ERVK MQ GK S CV+ LVR G++ GLF+G T+LRE + Y+ SY++AK A+ P ST P L LAGG+AG W+P +Y +DVIK+R+Q + Y GV DC V++ RA G+ V FRG ++ RAFP H VFLGYE T+ +
Sbjct: 78 QHLLGGTVGGIMGIVASYPFDTVKVRIQTQPPGSALYTGMVDCFRKIIKSEGALALYSGMLSPVVGVAGVKAVVFGSYGGISQWLLARKQGVVAGSEQPQQQQQPVKLSGFENALASCSAGLVATIVVTPVERVKVSMQASGGKAFKSTLD----CVLSLVRTAGISGGLFKGFVPTVLREVPSYGAYFISYDMAKRAFCQPGQDVSTLSP--GLLALAGGIAGVMAWVP-IYPIDVIKSRIQAQPSSALVAASSGSSSRPYSGVVDCAVRSYRAEGLGVFFRGLTPTIARAFPCHAAVFLGYELTLRY 379
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: A0A068RE90_9FUNG (Mitochondrial carrier n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RE90_9FUNG) HSP 1 Score: 175 bits (444), Expect = 1.700e-48 Identity = 114/289 (39.45%), Postives = 165/289 (57.09%), Query Frame = 1
Query: 22 LAGGTVGGVVGMSVVYPLDTVKSRLQTSGHSRYGSIAGVLSSMARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFLLRQRGADKNDR--MTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQVRRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYLLPPDRTSTHVPEAALQILAGGVAGCAIW---LPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDFLDA 873
LAGG GG+ + V P D VK R+QTS H Y + + +++G++ +YRG+ +P+A +FA+SF SY + + R +DKND+ MTL E AGA++ V ERVK +MQ++ G+ + Y VV + +EG +FRG GAT+LR+ A Y+ +YE+ K L P + A+ ++AGG AG A+W +PP DV+K+R+Q+A AG Y G+ DCL KT++A G LFRG G +MLRAFP + FLG E + LDA
Sbjct: 36 LAGG-FGGMASVMVGQPFDLVKVRMQTS-HGLYKNTFDCFKQIIKNDGILGMYRGMATPLASITPIFAVSFFSYDLGKKIVYAAR-SDKNDKSPMTLAETTFAGAFSAVPTTLFMAPSERVKVLMQIQ-GQGGEAKYK-GPLDVVAKLYKEGGLRSIFRGTGATLLRDAPGSAAYFVAYELIKKGLTPAGSKPEDLSLGAI-LVAGGTAGVAMWTIAIPP----DVLKSRLQSAPAGTYSGLLDCLGKTIKADGASALFRGLGPAMLRAFPANAATFLGVEYSRKMLDA 314
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Match: A0A0L0D911_THETB (Carnitine/acylcarnitine n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D911_THETB) HSP 1 Score: 174 bits (442), Expect = 2.510e-48 Identity = 113/294 (38.44%), Postives = 166/294 (56.46%), Query Frame = 1
Query: 10 FWQELAGGTVGGVVGMSVVYPLDTVKSRLQTSGHSRYGSIAGVLSSMARSEGVMSLYRGLLSPVAGYGAMFAISFSSYGYAGRFL---LRQRGADKNDRMTLPEMGLAGAWAGVMNAPLRQVFERVKGVMQV--RRGKELASPYSWSGACVVDLVRREGVAMGLFRGMGATMLREPVQFAIYYPSYEIAKAYL---LPPDRTSTHVPEAALQILAGGVAGCAIWLPPVYCLDVIKTRMQTAQAGVYRGVWDCLVKTVRAGGVQVLFRGFGASMLRAFPMHGLVFLGYETTIDFL 867
+W + G +GG+VG+++ +PLDT+K R+ +Y S+ L SM SEG SLYRGL +PVAGYG + A++F S+ +A +L + + A ++ +P A A+AG++ + +R E K V Q G A P+ + + +VR +G + LFRG+GAT+ RE Q+AIYYP+Y + K L LP S + P A AG +AG A W+P + +DVIKTRMQ A AG Y V C G+ F+G +++RA P+H VFLGY+TT+ L
Sbjct: 17 WWHSVVAGNMGGIVGLAISFPLDTLKVRMMMEPD-KYVSLGATLRSMVASEGPASLYRGLTAPVAGYGVINAVAFGSFEWAKSWLDEVVDETRAGSMAQVVIP----AAAFAGLVQSFVRGPVELAKTVQQAWHNPGNARAPPFKSAFHGIAHVVRNDGPS-ALFRGLGATIAREVPQYAIYYPTYALLKPALTDALP----SKYAPVAVAA--AGALAGSAQWVPTIP-VDVIKTRMQGAPAGTYTSVVHCARTLWAEQGLATFFKGTAPALIRAAPLHAGVFLGYDTTMKLL 297 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1135.1187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1135.1187.1 >prot_L-elsbetiae_contig1135.1187.1 ID=prot_L-elsbetiae_contig1135.1187.1|Name=mRNA_L-elsbetiae_contig1135.1187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp MPSFWQELAGGTVGGVVGMSVVYPLDTVKSRLQTSGHSRYGSIAGVLSSMback to top mRNA from alignment at L-elsbetiae_contig1135:2559..15354- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1135.1187.1 ID=mRNA_L-elsbetiae_contig1135.1187.1|Name=mRNA_L-elsbetiae_contig1135.1187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12796bp|location=Sequence derived from alignment at L-elsbetiae_contig1135:2559..15354- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1135:2559..15354- >mRNA_L-elsbetiae_contig1135.1187.1 ID=mRNA_L-elsbetiae_contig1135.1187.1|Name=mRNA_L-elsbetiae_contig1135.1187.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1962bp|location=Sequence derived from alignment at L-elsbetiae_contig1135:2559..15354- (Laminarionema elsbetiae ELsaHSoW15)back to top |