mRNA_L-elsbetiae_contig11344.1184.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: A0A6H5JZN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN0_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.660e-71 Identity = 207/523 (39.58%), Postives = 238/523 (45.51%), Query Frame = 1 Query: 334 EVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMRGAVAANGL-------------------------------ATDGATVP-----PAAVAGDGGGGVVSFPTGDDLR----DTDANSVGDTASAREKGRERQGDGAWNGVGKEERGPEGAEEGAGGMAKGSCSVRGLSWGSVGPASIKLAREQWRPQVVLGADVFYSSDHFDSVLATAFMLLSAVSRPSGGRGC-----------------GGAGVDADSAANAAFSVSCTTVGK-----------------------------------------------------------------------------------------------GTASAGGLSARNAYAPVVVAAGVVASTADSKSAAAAITPPGLSLGPTDVADSIAASSSYGSPFSRDKSVFLTAYHERSARRSLRPLLRKWGMEATVLHDAPRQVLPPILWESGRYDSVALLEITL 1446 EVLSEDFGLFTWPSGV+LA LIWARRREF G SVVEIGAGTALPGLLAAKLGA V+LTDRE APWVL+NMRGAVAANGL DG P PA +G GG V D R + D G +S GA + +E+G G G CSV+GLSWGSVG A+IKLARE+ RPQVVLGADVFYSS+HF+ VLATAFMLLS G A + + + AFS +C+ ++ G SA AP S A A+ G T A ++ ++GSPFSR + VFLTAY ERSARRS+RPLLRKWGM+A VLHD P++VLPP LWESGRYDSVALLEITL Sbjct: 291 EVLSEDFGLFTWPSGVVLACLIWARRREFDGASVVEIGAGTALPGLLAAKLGASVVLTDREEAPWVLDNMRGAVAANGLNLGPPDDASPAIGTATAETVSAETVCAAVPAIADGGGGPSTGAAPAPASGAAMGGCVKEWQSKDKRMGAWEPDGRGTGGYSSLAPSVAATAAAGAESFPRDQEKGTTREGRVGGTTRLGRCSVQGLSWGSVGAAAIKLARER-RPQVVLGADVFYSSEHFNDVLATAFMLLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAEISSAATDAPAFSAACSAADDVVVIEHRNSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNSATGTSSAAAPTAPETTXXXXXXXXXXXASLAGAV---GSEWQRTSSAKQADSTPTFGSPFSRSRGVFLTAYQERSARRSIRPLLRKWGMQARVLHDVPQRVLPPALWESGRYDSVALLEITL 809
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: D7FU39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU39_ECTSI) HSP 1 Score: 213 bits (543), Expect = 3.000e-58 Identity = 188/513 (36.65%), Postives = 215/513 (41.91%), Query Frame = 1 Query: 253 GEKGI-ATRSARQQXXXXXHQTVRVVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMRGAVAANGLATDGATVPPAAVAGDGGGGVVSFPTGDDLRDTDANSVGDTASAREKGRERQGDGAWNGVGKEERGPEGAEEGAGGMAK-GSCSVRGLSWGSVGPASIKLAREQWRPQVVLGADVFYSSDHFDSVLATAFMLLSAVSRPS---------------GGRGCGGAGVDADSAANAAFSVSCTTVGKGT-------------------------------------------------------------------------------------------------ASAGGLSARNAYAPVVVAAGVVASTADSKSAAAAITPPGLSLGPTDVADSIAASSSYGSPFSRDKSVFLTAYHERSARRSLRPLLRKWGMEATVLHDAPRQVLPPILWESGRYDSVALLEITLM 1449 GE+G+ TR ARQQ HQ VRVVVHEVLSEDFGLFTWPSGV+LA L+WARRREF G SVVEIGAGTALPGLLAAK EKG R G GG + G CSV+GLSWGSVG A+IKLARE+ RPQVVLGADVFYSS+HF+ VLATAFMLLS S + + + SAA A S S + G SA AP G + + S A + G + AD+ + ++GSPFSR + VFLTAY ERSARRS+RPLLRKWGM+A VL DAP++VLPP LWESGRYDSVALLEITLM Sbjct: 270 GEEGVEVTRGARQQ-----HQAVRVVVHEVLSEDFGLFTWPSGVVLACLVWARRREFDGASVVEIGAGTALPGLLAAK-------------------------------------------------------------------------EKGATRDGR-------------------IGGATRLGRCSVQGLSWGSVGAAAIKLARER-RPQVVLGADVFYSSEHFNDVLATAFMLLSGSSSMAPXXXXXXXXXXXXXXXXXXXXXSVAEISSAATGAPSFSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLKTATGTSSAAAPTAPETTPRGRDTAGGGAASLAGTVGSEGQRTSSAEPADT---TPTFGSPFSRSRGVFLTAYQERSARRSIRPLLRKWGMQARVLRDAPQRVLPPALWESGRYDSVALLEITLM 681
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: W1NM59_AMBTC (Uncharacterized protein n=6 Tax=Amborella trichopoda TaxID=13333 RepID=W1NM59_AMBTC) HSP 1 Score: 97.4 bits (241), Expect = 2.600e-19 Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 322 VVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 V + +V+ ED+G+FTWPS V+LA +W +R F G +V+E+GAGTALPGL+AAK+GA V+LTD P +L+NMR Sbjct: 42 VTIIQVMREDYGMFTWPSSVVLAEYVWQQRAHFSGRTVIELGAGTALPGLVAAKVGADVILTDSSNRPEILDNMR 116
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: D8SEL6_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SEL6_SELML) HSP 1 Score: 94.7 bits (234), Expect = 1.160e-18 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 313 TVRVVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 ++ V + EV+ ED+GL+ WP G+ L +W +R F G +V+E+GAGT LPG++AAK+GARV+LTD + P V ENMR Sbjct: 16 SLAVSISEVMKEDYGLYVWPCGICLGEYVWQQRHRFAGATVIELGAGTGLPGIVAAKVGARVILTDYKLYPEVFENMR 93
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: A0A5N6MK22_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MK22_9ASTR) HSP 1 Score: 95.1 bits (235), Expect = 1.310e-18 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 313 TVRVVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 T+ + V E + ED+GLF WP V+LA +W +R F G+SVVE+GAGT+LPGL+AAK+GA V+LTD VL+NMR Sbjct: 36 TISITVIESMKEDYGLFVWPCSVILAEYVWQQRSRFAGISVVELGAGTSLPGLVAAKVGADVILTDDSDRLEVLDNMR 113
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: A0A2K1KT47_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KT47_PHYPA) HSP 1 Score: 94.4 bits (233), Expect = 2.300e-18 Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 310 QTVRVVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 Q++ V EV+ E++GL+ WP V+LA IW R+ F G V+E+GAGTALPG++AAK+GA V+LTDRE P V ENM+ Sbjct: 34 QSLDVSCSEVMQEEYGLYVWPCSVVLAEYIWQNRQRFVGSRVIELGAGTALPGVVAAKVGASVVLTDREDQPQVFENMQ 112
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: UPI00080A0D25 (methyltransferase-like protein 23 isoform X3 n=1 Tax=Phaseolus angularis TaxID=3914 RepID=UPI00080A0D25) HSP 1 Score: 90.5 bits (223), Expect = 3.840e-18 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 322 VVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 + + E + ED+GLF WP V+LA +W ++ F G +VVE+GAGT+LPGL+AAKLGARV LTD VL+NMR Sbjct: 36 ISIIENMKEDYGLFVWPCSVVLAEYVWQQKHRFSGATVVELGAGTSLPGLVAAKLGARVTLTDNSTRLEVLDNMR 110
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: A0A2I0BF16_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BF16_9ASPA) HSP 1 Score: 94.0 bits (232), Expect = 4.790e-18 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 313 TVRVVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 ++RV V E + ED+G+F WP ++LA IW +R F G +V+E+GAGT+LPGL+AAK+GA V+LTD P VLENMR Sbjct: 54 SLRVDVIENMEEDYGMFVWPCSIILAEYIWQQRSRFSGKNVIELGAGTSLPGLVAAKVGAEVILTDDLHKPEVLENMR 131
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: A9RBK1_PHYPA (Uncharacterized protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RBK1_PHYPA) HSP 1 Score: 91.3 bits (225), Expect = 6.370e-18 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 334 EVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 +V+ E++GL+ WP V+LA IW R+ F G V+E+GAGTALPG++AAK+GA V+LTDRE P V ENM+ Sbjct: 5 QVMQEEYGLYVWPCSVVLAEYIWQNRQRFVGSRVIELGAGTALPGVVAAKVGASVVLTDREDQPQVFENMQ 75
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Match: UPI00053C3104 (methyltransferase-like protein 23 isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3104) HSP 1 Score: 90.9 bits (224), Expect = 9.170e-18 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 322 VVVHEVLSEDFGLFTWPSGVLLAYLIWARRREFGGVSVVEIGAGTALPGLLAAKLGARVLLTDREGAPWVLENMR 546 V + E + E++GLF WP ++LA +W +R F G SV+E+GAGT+LPGL+AAK+GA V LTD P VLENMR Sbjct: 32 VSIIENMKEEYGLFVWPCSIILAEYVWQQRSRFQGSSVLELGAGTSLPGLIAAKVGANVTLTDDSSRPEVLENMR 106 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11344.1184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11344.1184.1 >prot_L-elsbetiae_contig11344.1184.1 ID=prot_L-elsbetiae_contig11344.1184.1|Name=mRNA_L-elsbetiae_contig11344.1184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=485bp DTTAPRDAGQAAGRGHRVGEDGVSLMGWDDAAPEEPGAREKGGNKETIVEback to top mRNA from alignment at L-elsbetiae_contig11344:3107..6165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11344.1184.1 ID=mRNA_L-elsbetiae_contig11344.1184.1|Name=mRNA_L-elsbetiae_contig11344.1184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3059bp|location=Sequence derived from alignment at L-elsbetiae_contig11344:3107..6165- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11344:3107..6165- >mRNA_L-elsbetiae_contig11344.1184.1 ID=mRNA_L-elsbetiae_contig11344.1184.1|Name=mRNA_L-elsbetiae_contig11344.1184.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2910bp|location=Sequence derived from alignment at L-elsbetiae_contig11344:3107..6165- (Laminarionema elsbetiae ELsaHSoW15)back to top |