mRNA_L-elsbetiae_contig11344.1183.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: D7FU34_ECTSI (AAA_31 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU34_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.250e-80 Identity = 123/140 (87.86%), Postives = 134/140 (95.71%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDDAALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 +GARHAMYLADEAVIVTNPEVSSCRDSDKMVGFI+SKSRRAETG PVRQTLLVTRYDPARAESNEMLTL DIQELLGLEVLG++PESKAVLTATNLGQPVI++EGDDAA AYKDAVDRFLGK VDL+FV+PKP GL+++ Sbjct: 194 SGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFIASKSRRAETGQAPVRQTLLVTRYDPARAESNEMLTLADIQELLGLEVLGLIPESKAVLTATNLGQPVIVSEGDDAATAYKDAVDRFLGKTVDLKFVQPKPAGLLKR 333
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A6H5KA54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA54_9PHAE) HSP 1 Score: 236 bits (601), Expect = 7.450e-76 Identity = 118/140 (84.29%), Postives = 127/140 (90.71%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDDAALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 +GARHAMYLADEAVIVTNPEVSSCRDSDKMVGFI+S SRRAE G PVRQTLLVTRYDPARAE NEMLTL DIQELLGLEVLG P SKAVLTATNLGQPVI++EGDDAA AYKDAVDRFLGK VDL+F +PKP GL+++ Sbjct: 143 SGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFIASMSRRAEAGQAPVRQTLLVTRYDPARAECNEMLTLADIQELLGLEVLGFFPVSKAVLTATNLGQPVIVSEGDDAATAYKDAVDRFLGKTVDLKFGQPKPAGLLKR 282
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A4D9DHA4_9STRA (AAA_31 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHA4_9STRA) HSP 1 Score: 197 bits (501), Expect = 7.560e-61 Identity = 93/138 (67.39%), Postives = 114/138 (82.61%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDDAALAYKDAVDRFLGKKVDLRFVEPKPVGLV 414 +GARHAMY AD+A+IVTNPE+SSCRDSDKM+GFISS+S+RAE G PVRQ+LLVTRYDP RA+ E L L DI+ELLGLE+LGV+PESK +LTATNLGQPVI DA AY D V+RFLG++ + RF+ P+P G++ Sbjct: 132 SGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGIL 269
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A6U2QQG7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2QQG7_9STRA) HSP 1 Score: 191 bits (484), Expect = 9.550e-58 Identity = 96/144 (66.67%), Postives = 117/144 (81.25%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTP---VRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVI-MTEGDDAALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 +GARHAMY AD+AVIVTNPE+SSCRD+DKMVGFISS+SRRAE G+ V QTLL+TRYDP RAE+ E L + DI+ELLGL V+GV+PESK++LT TNLGQPVI + E D AA AY D VDRFLG+K +LR+V P+PV ++ Sbjct: 174 SGARHAMYFADDAVIVTNPELSSCRDADKMVGFISSRSRRAEMGENETKSVTQTLLITRYDPVRAEAEESLAIADIEELLGLPVVGVIPESKSILTCTNLGQPVITLGEEDQAAGAYSDMVDRFLGEKKELRYVTPEPVSFFKR 317
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A7S2E996_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E996_TRICV) HSP 1 Score: 186 bits (473), Expect = 4.710e-56 Identity = 93/143 (65.03%), Postives = 117/143 (81.82%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDT--PVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVI-MTEGDDAALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 +GARHAMY AD+A+IVTNPE+SSCRD+DKM+GFISS+SRR+E GD PV QTLL+TRYDP RA + E L+L DI+ELLGL V+GV+PES+ VLT TNLG P+I + E +DAA AY D VDRFLG++ +LRFV P+PV ++ Sbjct: 178 SGARHAMYFADDAIIVTNPELSSCRDADKMIGFISSRSRRSEIGDAVNPVSQTLLITRYDPERAAAEESLSLLDIEELLGLPVVGVIPESRDVLTCTNLGTPIITLGEENDAASAYSDMVDRFLGEEKELRFVMPEPVSFFKR 320
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A7S4V4S5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V4S5_9STRA) HSP 1 Score: 186 bits (472), Expect = 7.230e-56 Identity = 95/144 (65.97%), Postives = 116/144 (80.56%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDT--PVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDD--AALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 +GARHAMY AD+A+IVTNPE+SSCRD+DKMVGF+SS+SRRAE GD PV QTLL+TRYD RA + E L+L DI+ELLGL ++GV+PESK VLT TNLG P+I T GDD AA AY D VDRFLG++ DLRF+ P+PV ++ Sbjct: 181 SGARHAMYFADDAIIVTNPELSSCRDADKMVGFVSSRSRRAEIGDDVDPVSQTLLITRYDAQRAVAEECLSLNDIEELLGLPIIGVIPESKDVLTCTNLGTPII-TLGDDNPAAGAYSDMVDRFLGEEKDLRFITPEPVSFFKR 323
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A7S2XZY4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZY4_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.170e-55 Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDDAALAYKDAVDRFLGKKVDLRFVE-PKPVGLVRK 420 +GA HAMY AD+A+IVTNPE+SSCRDSDKMVGFISSKS RAE G + V QTLLVTRYDP R ES +ML L D+++LLGL +LGV+PES VL ATNLG+PVI EG+D + AY+DAV RFLG++++LRF E P P L ++ Sbjct: 183 SGAHHAMYFADDALIVTNPELSSCRDSDKMVGFISSKSLRAEEGRSGVSQTLLVTRYDPQRVESEDMLHLDDVKDLLGLPLLGVIPESSLVLAATNLGKPVITMEGNDVSEAYQDAVGRFLGEELELRFTEIPPPTSLFQR 323
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A7S2WWU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWU1_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.290e-54 Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 1 Query: 4 GARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDDAALAYKDAVDRFLGKKVDLRFVEP 396 GARHAMY AD+AVI NPE+SSCRDSDKM+GFI+S+S+R+E G PVRQ LL+ RYD +R ES EML L DIQELLGLE++GV+PESKAVLTATNLGQPV+ + AA A++D V RFLG+ LRF+EP Sbjct: 188 GARHAMYFADDAVITVNPELSSCRDSDKMIGFIASRSKRSEEGLEPVRQMLLINRYDASRVESQEMLQLDDIQELLGLELIGVIPESKAVLTATNLGQPVVSLSEEPAAQAFEDTVARFLGEDRPLRFIEP 318
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A7S1DCP0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCP0_CYCTE) HSP 1 Score: 180 bits (457), Expect = 6.830e-54 Identity = 93/145 (64.14%), Postives = 117/145 (80.69%), Query Frame = 1 Query: 1 TGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTP---VRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDD--AALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 +GARHAMY AD+A+IVTNPE+S+CRD+DKM+GFISSKSRRAE G+T V QTLL+ RYDP+RAE++E L++ DI+ELLGL V+GVVPESK +L TN+G PVI T GDD AA A+ D VDRFLG + +LRFV P+PV ++ Sbjct: 156 SGARHAMYFADDAIIVTNPELSACRDADKMIGFISSKSRRAELGETQTKSVSQTLLINRYDPSRAEADESLSMFDIEELLGLPVVGVVPESKDILPCTNIGNPVI-TLGDDNPAAGAFHDMVDRFLGHEKELRFVTPEPVSFFKR 299
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Match: A0A1G5Q0K6_9GAMM (Septum site-determining protein MinD n=2 Tax=Thiohalomonas denitrificans TaxID=415747 RepID=A0A1G5Q0K6_9GAMM) HSP 1 Score: 175 bits (444), Expect = 2.090e-52 Identity = 86/139 (61.87%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 4 GARHAMYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRYDPARAESNEMLTLGDIQELLGLEVLGVVPESKAVLTATNLGQPVIMTEGDDAALAYKDAVDRFLGKKVDLRFVEPKPVGLVRK 420 GA+ AMY ADEAV+VTNPEVSS RDSD+M+G I+SKSRRAE GD PVR+ LL+TRY P R +ML++ DI EL+G+ +LGV+PES++VL A+N GQPVI+ + D A AY DAV RFLG++V LRFVE +P GL+++ Sbjct: 122 GAQMAMYYADEAVVVTNPEVSSVRDSDRMLGIIASKSRRAEQGDEPVREHLLITRYAPERVSGGDMLSVDDIVELIGIGLLGVIPESESVLQASNAGQPVILDQKDRAGQAYSDAVARFLGEQVPLRFVEAEPKGLLKR 260 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11344.1183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11344.1183.1 >prot_L-elsbetiae_contig11344.1183.1 ID=prot_L-elsbetiae_contig11344.1183.1|Name=mRNA_L-elsbetiae_contig11344.1183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MYLADEAVIVTNPEVSSCRDSDKMVGFISSKSRRAETGDTPVRQTLLVTRback to top mRNA from alignment at L-elsbetiae_contig11344:325..2048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11344.1183.1 ID=mRNA_L-elsbetiae_contig11344.1183.1|Name=mRNA_L-elsbetiae_contig11344.1183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1724bp|location=Sequence derived from alignment at L-elsbetiae_contig11344:325..2048+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11344:325..2048+ >mRNA_L-elsbetiae_contig11344.1183.1 ID=mRNA_L-elsbetiae_contig11344.1183.1|Name=mRNA_L-elsbetiae_contig11344.1183.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig11344:325..2048+ (Laminarionema elsbetiae ELsaHSoW15)back to top |