mRNA_L-elsbetiae_contig11313.1169.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11313.1169.1
Unique NamemRNA_L-elsbetiae_contig11313.1169.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 4.720e-56
Identity = 183/473 (38.69%), Postives = 222/473 (46.93%), Query Frame = 2
Query:  116 MNELHFAAGVGSAERTIAVLSRGVVSVDHSTPVKGRTPLMLAASFGHTQVVNILLNRGANVALADYNGFAALHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLTFSNP--GASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQG--DGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKI-NGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTP----LMLMMPILRRRAGRPRVLLAALFRNSKK 1507
            +N+LH A  VGSAE T AVL+ G V +D      G TPLM+A   GH+++  +L+ +GANV++AD  GF ALH                                         XXXXXXXXXXXXX                                                                 PLL  ++P    + VPLD A             GH  V RELIQ  GIEGC   S G  AL  AA  QHL+IM +LT  GVVDTG AL  AA  G E S+KFLL+ +  K  G G    YL+A    G TPLV   Q C  S +PRI+R+LVDAGADTT+ V++    G V F+DTPLA   L LR K + +G+ AT+  L  +EA  RLL+RV+AVHAVSWLW S  P          G ATE    P    L LM+PIL+RR  R   L+A L R S K
Sbjct:  106 LNQLHRAVLVGSAELTQAVLAGGTVEIDQRNSY-GATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNAN-------------------------------PLLIQTSPPGNTTTVPLDLAAKH----------GHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRH-KEGGCGVEGAYLNARDVNGYTPLVVCTQGC-FSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFI--------GRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 7.560e-52
Identity = 133/275 (48.36%), Postives = 168/275 (61.09%), Query Frame = 2
Query:  695 LLTFSNP-GASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNK-KINGED-ATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTPLMLMMPILRRRAGRPRVLLAALFRNSKKP 1510
            L T  +P G + +PLDAA  +          GH  V  ELI+  GI+GCGG+SGGV+ALQ AAQ ++L IM +LT+ GVVDTGLAL  AA  G E  +KFLL+Q   + +     Y++   R G TPL+  IQ  R    PR++RLLV+AGADTT+ V +    G      TPL L    +R+K K+ G   A+  QLH +EA RRLL+RVEAVHAVSWLW SD+ + T A A GT   T A ST + L M + RRRA   +V LAAL R S KP
Sbjct:  176 LTTVPDPSGRTFLPLDAAAEN----------GHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYR----PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTT-AISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.740e-49
Identity = 210/470 (44.68%), Postives = 259/470 (55.11%), Query Frame = 2
Query:  116 MNELHFAAGVGSAERTIAVLSRGVVSVDHSTPVKGRTPLMLAASFGHTQVVNILLNRGANVALADYNGFAALHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLTFSNPGASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQACRL---SCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYA--NAEGTGGATEATSTPLMLMMPILRRRAGRPRVLLAALFRNSKKP 1510
            MN LH AA  GS ERT  +L+ G   ++  T V   TPL+ AAS GH+ V+ ILL++GANV++    G  ALH                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   PL+T + P  + +PLD+A  +          G+L V RELIQ  GIEGCGG S G  AL  A + + +  M LLT  GVVDTG AL  +A  G+E S+K+LLQ    K  G G  Y++   R G TPL+ SI  C +   S  PR+ RLLV+AGADTTT +R   + G V F  TPL L    L++KK++G   ++ +L  +E  RRLL++VEAVHA SWLW S          NA     AT A +  L  ++PILRRRA RP V+  AL R+ +KP
Sbjct:    1 MNSLHDAAFKGSTERTAELLATGSWDINQGT-VNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALH--------------------------------VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRA-PLPTLLPLDSAARN----------GNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA-KHYGPG-AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.790e-49
Identity = 113/242 (46.69%), Postives = 149/242 (61.57%), Query Frame = 2
Query:  785 GHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTP-LMLMMPILRRRAGRPRVLLAALFRNSKK 1507
            GH  V RELIQ  G+ GCGG S GV++L+ AA EQ+++IMG+LT  GVVDTG AL  AA   +E S+KFLLQ Q    +   +  LD    FG TPLVC+I+AC  S SPRI R L+D GADT +TV +  +G      DTPL  A   LR  K+ G++ATE QL S++A  RLL ++EAVHAVSWLW S      +A    +      T+ P L  M  +LR   G+  V+L A++R +++
Sbjct:  191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDP---FGRTPLVCTIEACGSS-SPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEE 428          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.060e-47
Identity = 119/262 (45.42%), Postives = 152/262 (58.02%), Query Frame = 2
Query:  716 GASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTPLMLMMP-ILRRRAG-RPRVLLAALFR 1495
            GA+ VPLD A             GH  V REL    G+ GCGG SGGV++L+ A  EQ ++IMG+LT  GVVDTG AL  AA   +E S+KFLLQ Q    +   +  LD    FG TPLVC+I+AC  S SPRI R L+DA ADT +TV +  +G      DTPL  A   LR  K+  ++ATE QL S++A  RLL +V+AVHAVSWLW S     +YA    +       + PL+  MP +LR   G R  V+L A++R
Sbjct:  168 GATFVPLDVAVQH----------GHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDP---FGRTPLVCTIEACGSS-SPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 6.810e-47
Identity = 122/276 (44.20%), Postives = 160/276 (57.97%), Query Frame = 2
Query:  692 PLLTFSNPGASP--VPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGG--ATEATSTPLMLMMPILRRRAGRPRVLLAALFRNSKK 1507
            PLLT ++       +PLD A  +          GH  V  ELI+  GI+GCGG+SGG  AL+ AA    L+IM +LT  GVVDTGLAL  AA  G E  +KFLL+Q   + S     Y++     G T L+  IQ CR    PR+++LLV+AGADTT+ V +    G+  F  TPL L    L  +  + +  T  + + +E  RRLL+R EAVHAVSWLW SD P+ T+A A+GTG   AT   +TP +++M I RR  GR + LLAAL R S K
Sbjct:  174 PLLTCASDSGKERFLPLDVAAQN----------GHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCR----PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM-IGRRTRGR-KGLLAALLRYSSK 431          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 1.920e-46
Identity = 243/477 (50.94%), Postives = 291/477 (61.01%), Query Frame = 2
Query:  113 PMNELHFAAGVGSAERTIAVLSRGVVSVDHSTPVKGRTPLMLAASFGHTQVVNILLNRGANVALADYNGFAALHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLL-TFSNPGASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDG---YLDAP--GRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLA-GAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDV-----PSFTYANAEGTGGATEATSTPLMLMMPILRRRAGRPRVLLAALFRNSKK 1507
            P NELH AA  GS++RT ++L+ G + +D   P +G TPLM AA  GH+ V+ +LLNRGA++   D + +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 PLL T  + G + VPLD A  +          GHLAVAREL+Q FGI GC GAS GV AL  AA +QHL++M LL   GVVDTG AL A    G+ER++KFLL+Q+     G+G     Y   P  GR G TPL+ ++      CSPR++RLLVDAGAD T  VR+  G G    +  TPL  A   L  K ++ + AT  QL ++ A+RRLL++VE VHA SWLW         P    A  E T G       PL   +PI+ RR+ R    L  +FR +KK
Sbjct:   11 PRNELHKAALDGSSQRTESLLAGGRIDIDQGDP-RGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------PLLPTRMSSGNTFVPLDGAALN----------GHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQK-----GEGTARTTYASTPRDGR-GHTPLLSAVTTG--PCSPRVVRLLVDAGADATLAVRVPDGFGRSTKY--TPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGK------PLKSRLPIMWRRSARRGAALPGVFRLAKK 427          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.880e-46
Identity = 100/206 (48.54%), Postives = 132/206 (64.08%), Query Frame = 2
Query:  887 QHLEIMGLLTSTGVVDT-GLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTPLMLMMPILRRRAGRPRVLLAALFRNS 1501
            QH++IM +LT  GV D  G  L   A  G+E S++FLL+Q+  ++      Y ++    G TPL CSI+ C  S +PRI+RLLVDAGADTT+TVR+    G V ++DTPLA+    LR K ++G+ ATE QLH ++A RRLL+RV+AVHAVSWLW SD PS  +A     G   E    PL L +PIL+RRA    V +A L R+S
Sbjct:    3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCS-SGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCG--PEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS 205          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 5.850e-46
Identity = 130/282 (46.10%), Postives = 167/282 (59.22%), Query Frame = 2
Query:  692 PLLTFSNP-GASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMG-LLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAPGRFGATPLVCSIQ--ACRLSCSPRIMRLLVDAGADTTTTV---RLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEG---TGGATEATSTPLMLMMPILRRRAGRPRVLLAALFRNSKK 1507
            PLL    P G S VPL+ A             G+  VARE+I+  GI GCGG SGGV+AL+ AA E+HLE M  LL + GVVDTG AL  AA  G+  ++KFLL++++  A    +G  D    +G TP++C++   A RL CSP+I+RLLVDAGA+TT  V   R+          +TPLA     LR  +++GE AT+ QL  ++  R LL R EAVHAVSWLWAS  P    A A G   T  A+ A +TPL  M P+LRR+ G   VLL  LFR S+K
Sbjct:  171 PLLCSHTPMGVSYVPLEMAA----------LHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDP---YGRTPVMCAVDVGAGRL-CSPKIVRLLVDAGANTTRAVGVTRITPRWEKT--SETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPP-RIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 1.530e-44
Identity = 121/277 (43.68%), Postives = 154/277 (55.60%), Query Frame = 2
Query:  692 PLLTFSNPGASPVPLDAATNDAXXXXXXXXXGHLAVARELIQHFGIEGCGGASGGVQALQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWKASGQGDGYLDAP-GRFGATPLVCSIQA-CRLSCSPRIMRLLVDAGADTTTTVRLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMRVEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTP---LMLMMPILRRRAGRPRVLLAALFRNSKK 1507
            PLLT  N     +PLD A  +          G L V  EL+Q FGI GCGG +GGV ALQ AA + H+++M  LT+ GVVDTG+AL  A   G    +KFLLQQQ    S +   Y+  P    G TPL+C+I      SCSP+++RLLVDAGADTT+ VR     G +    TPL+LA   LR K    +   +  L  +E  RRLL+RVEAVHA SWLW + VP             TE++ST    L  ++PILRRRA     + A+L R + K
Sbjct:  173 PLLTRVNLAWQHLPLDTAAQN----------GRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPS-EKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11313.1169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI4.720e-5638.69EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KJA9_9PHAE7.560e-5248.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI1.740e-4944.68EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1U9_ECTSI1.790e-4946.69EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE4.060e-4745.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE6.810e-4744.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI1.920e-4650.94EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LSC5_ECTSI2.880e-4648.54EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI5.850e-4646.10EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVK3_ECTSI1.530e-4443.68EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11313contigL-elsbetiae_contig11313:923..3894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.2
Seed ortholog evalue5.1e-52
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2510
Cds size1398
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11313.1169.1prot_L-elsbetiae_contig11313.1169.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11313 1920..3779 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815342.6769214-UTR-L-elsbetiae_contig11313:922..19191622815342.6769214-UTR-L-elsbetiae_contig11313:922..1919Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11313 923..1919 -
1691682849.808941-UTR-L-elsbetiae_contig11313:922..19191691682849.808941-UTR-L-elsbetiae_contig11313:922..1919Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11313 923..1919 -
1622815342.7113063-UTR-L-elsbetiae_contig11313:3779..38941622815342.7113063-UTR-L-elsbetiae_contig11313:3779..3894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11313 3780..3894 -
1691682849.8380551-UTR-L-elsbetiae_contig11313:3779..38941691682849.8380551-UTR-L-elsbetiae_contig11313:3779..3894Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11313 3780..3894 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815342.6901238-CDS-L-elsbetiae_contig11313:1919..19381622815342.6901238-CDS-L-elsbetiae_contig11313:1919..1938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11313 1920..1938 -
1691682849.819412-CDS-L-elsbetiae_contig11313:1919..19381691682849.819412-CDS-L-elsbetiae_contig11313:1919..1938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11313 1920..1938 -
1622815342.6994371-CDS-L-elsbetiae_contig11313:2400..37791622815342.6994371-CDS-L-elsbetiae_contig11313:2400..3779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11313 2401..3779 -
1691682849.828781-CDS-L-elsbetiae_contig11313:2400..37791691682849.828781-CDS-L-elsbetiae_contig11313:2400..3779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11313 2401..3779 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11313.1169.1

>prot_L-elsbetiae_contig11313.1169.1 ID=prot_L-elsbetiae_contig11313.1169.1|Name=mRNA_L-elsbetiae_contig11313.1169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp
MNELHFAAGVGSAERTIAVLSRGVVSVDHSTPVKGRTPLMLAASFGHTQV
VNILLNRGANVALADYNGFAALHHAAGFGHTQVVNILLNRGANVALVDYN
GFAALHLTAHRGFLAVTKLLVEAGADLEATTPSGSTPLHLASEKGYSEVM
RVLIEAGANPNSRAMDGATPLCIAANDGHVGAIKVLFRAGAEPLLTFSNP
GASPVPLDAATNDAVPLDAAANNGHLAVARELIQHFGIEGCGGASGGVQA
LQAAAQEQHLEIMGLLTSTGVVDTGLALRAAAVCGQERSMKFLLQQQEWK
ASGQGDGYLDAPGRFGATPLVCSIQACRLSCSPRIMRLLVDAGADTTTTV
RLAGAGGDVFFDDTPLALADLYLRNKKINGEDATESQLHSVEAARRLLMR
VEAVHAVSWLWASDVPSFTYANAEGTGGATEATSTPLMLMMPILRRRAGR
PRVLLAALFRNSKKP*
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mRNA from alignment at L-elsbetiae_contig11313:923..3894-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11313.1169.1 ID=mRNA_L-elsbetiae_contig11313.1169.1|Name=mRNA_L-elsbetiae_contig11313.1169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2972bp|location=Sequence derived from alignment at L-elsbetiae_contig11313:923..3894- (Laminarionema elsbetiae ELsaHSoW15)
GTACTTGAAGGGTTGAAGGGTACTTGAACTGTCCGTCTGCTCTGGACCTA CAGCTTATGCGTTTTCTAGTCATTGTTCCATAGCCCGCAGCGAGGGAAAG TGAGCCTGGGATCCTATGAACGAACTGCACTTTGCCGCGGGTGTTGGCTC CGCCGAGCGTACGATAGCTGTGCTCTCGAGGGGCGTTGTCAGCGTCGATC ACAGTACACCAGTGAAGGGCCGCACCCCTCTCATGCTTGCCGCCAGCTTC GGTCATACGCAAGTTGTCAACATCCTCCTGAACAGGGGAGCCAACGTGGC ATTAGCGGATTATAATGGTTTCGCTGCTCTGCACCATGCCGCCGGCTTCG GTCATACGCAAGTTGTCAACATCCTCTTGAACAGGGGAGCCAACGTGGCA TTAGTGGATTATAATGGTTTCGCTGCTCTGCACCTGACGGCTCACCGAGG ATTTTTGGCCGTGACGAAGCTGCTGGTGGAGGCCGGCGCAGACCTGGAAG CAACGACCCCTTCAGGCTCCACACCGCTTCACCTGGCTTCGGAGAAAGGG TACTCGGAGGTGATGAGAGTGCTGATCGAGGCAGGAGCAAACCCCAACAG TCGTGCGATGGATGGTGCGACACCGCTGTGCATCGCGGCTAATGATGGGC ACGTGGGTGCGATCAAGGTGCTCTTTCGTGCGGGAGCAGAGCCGCTGCTG ACTTTTTCGAATCCAGGGGCTTCCCCCGTACCTCTGGACGCGGCAACGAA TGACGCCGTACCTCTGGACGCGGCAGCGAATAACGGGCACTTAGCAGTTG CACGCGAGCTGATTCAGCACTTTGGGATCGAGGGCTGTGGCGGTGCAAGC GGCGGTGTGCAAGCTCTCCAAGCAGCCGCCCAGGAACAGCATTTGGAGAT TATGGGGTTGCTGACCAGCACCGGAGTGGTTGATACGGGTTTAGCCCTAC GAGCTGCCGCCGTGTGTGGCCAAGAGCGATCCATGAAGTTTCTGTTGCAG CAGCAAGAGTGGAAAGCTAGTGGTCAAGGAGATGGCTACCTGGACGCCCC GGGCCGTTTCGGTGCAACGCCCTTAGTATGTAGTATTCAGGCTTGCCGCT TATCATGCTCTCCCAGAATCATGAGGTTGCTCGTGGATGCGGGAGCAGAC ACTACGACGACCGTTCGACTAGCAGGCGCAGGGGGTGACGTGTTTTTCGA TGACACGCCCCTGGCTCTCGCGGACTTGTACCTCCGTAACAAGAAGATCA ACGGAGAGGATGCCACAGAGAGCCAGCTCCACAGCGTGGAGGCTGCCCGG CGGTTGCTGATGAGGGTGGAGGCTGTTCATGCGGTCTCTTGGTTGTGGGC AAGTGACGTCCCCTCCTTTACGTATGCTAATGCAGAGGGTACGGGCGGCG CTACCGAGGCAACTTCGACCCCGCTGATGTTGATGATGCCGATCTTGAGA AGAAGGGCTGGAAGGCCCAGGGTGCTCTTGGCCGCCCTGTTCAGGTGGGT GGTGATGAGTACCATGGTTGCTGTGTCATATTGGCATAATGGTTTACATG CGATAACTGCATGATGGAGGAGGCTCTCGTATCGACGTAGCCACTATGTA CCTCTGTGCCTGATGTCTCGATCAGTATTTGCGTCACAGTACACTTGTTT TATGTGTGAGCACCTAGAGCCTAGAGTCGTCTTGGCTCGCCGTGCCGTCT CTCGGGTGCGTCCTGAAAAGTTACAAATGATTAGTTTTTCCTTCTCGGGA AGGTGTGCTCGAAGGTTTGACGTTGACAAGTTTCGGTCACTAGACTATGT ATGCAGTGATTTCCCACTCAACTCGTTCTTCGAGGGTAGACGCACAATAT AATCAGCGTATCGAATGCCGTGCGTCCCCAGTCTCGGCCCCGCCACACAA CTGTCTGTCCGGTATGTTTTGGTTCGTTGCCTTGTCGCGCTCGCGTGCTT TTGCAGGAATTCGAAGAAGCCTTGAACAAGACCGTTTCGCAGGATGTGGA GAGCGGTGCTTTGTCGCCCTAGTCGTGTACGGGCCACTCACTTACAGAAG TAGCATTATACCACAACACACGCTTTGCTTTGGAGAAGTAGCGGTAGTTT CTAGGGTGCTCGAACGGTTCTATATGTTCGTGTTCGTAGGCTCCGTAGAC TGGGTATTTACATCGGGACAACGTGGCGAGGGTGTATGGCTCAAGTTGGT GCTTGCTCCTACCGCAATCTGAGAACTTGGTCTGGTTATATGGGTCAGGT TGCAGTGTGTGTTTACGCTCATCTTTCTGGCATTGGGATATTGTTTAATG TACATATTTATTTATTTTCTTCACATTTATTTCCAGTGCTCGATAGGCTC CCTGTCACGAGGACATCTTGCCAGAGTACTGAACCGTGGTCACACAGAAG GGTTCCTTTTCCCCAAGGCCCCCACTCCCCCGGTCTGCGGTGCTTGCCTA AGATTTTTGTCGCGAGAAGGGTTCAGCCTTCCTTTTCCCTCGTCGACGGT GAGGTCGAAGACACGCTAAGCGCTATCCGCTGACAGGGACGGAAGCCAGA GAAAAAAACTCACTTTGCAAGAAAAAATGTAGAAGTATTAGTCATGGCCA AGAAGAAGTTTTATTTCGTCGGTCATCTTCCTCCTGCGGTGCTGCGTTGA ATATATCTGCCTGATGCTGTATGTAGTTACTAGGGTTAAAGAACGCCCCC CCCCGCCTTGACGGGGCGGTGGGGCCAGAATGTGTTTGATATGCAGACCG GATGTGAAAACCGTAAAAGCCGGCGGGAGACGAGATCAGTCGTCGCACGA GGCATCGTTTAGAAAGGAAAGAAAGCGAAATCCCTCGTTTAGTGTTTTAT GCTGAGAGAAGTGCAGAAAAAGCAACAAATGTAGAGAAAGCGTGTGTACC ACGAACGTCGCAAGACGATTCGTTGGCACGTAGTTACGGGAAAAATAACT ACGGGAAATCCAAGAAGCAGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11313:923..3894-

>mRNA_L-elsbetiae_contig11313.1169.1 ID=mRNA_L-elsbetiae_contig11313.1169.1|Name=mRNA_L-elsbetiae_contig11313.1169.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2796bp|location=Sequence derived from alignment at L-elsbetiae_contig11313:923..3894- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACGAACTGCACTTTGCCGCGGGTGTTGGCTCCGCCGAGCGTACGAT
AGCTGTGCTCTCGAGGGGCGTTGTCAGCGTCGATCACAGTACACCAGTGA
AGGGCCGCACCCCTCTCATGCTTGCCGCCAGCTTCGGTCATACGCAAGTT
GTCAACATCCTCCTGAACAGGGGAGCCAACGTGGCATTAGCGGATTATAA
TGGTTTCGCTGCTCTGCACCATGCCGCCGGCTTCGGTCATACGCAAGTTG
TCAACATCCTCTTGAACAGGGGAGCCAACGTGGCATTAGTGGATTATAAT
GGTTTCGCTGCTCTGCACCTGACGGCTCACCGAGGATTTTTGGCCGTGAC
GAAGCTGCTGGTGGAGGCCGGCGCAGACCTGGAAGCAACGACCCCTTCAG
GCTCCACACCGCTTCACCTGGCTTCGGAGAAAGGGTACTCGGAGGTGATG
AGAGTGCTGATCGAGGCAGGAGCAAACCCCAACAGTCGTGCGATGGATGG
TGCGACACCGCTGTGCATCGCGGCTAATGATGGGCACGTGGGTGCGATCA
AGGTGCTCTTTCGTGCGGGAGCAGAGCCGCTGCTGACTTTTTCGAATCCA
GGGGCTTCCCCCGTACCTCTGGACGCGGCAACGAATGACGCCGTACCTCT
GGACGCGGCAGCGAATAACGGGCACTTAGCAGTTGCACGCGAGCTGATTC
AGCACTTTGGGATCGAGGGCTGTGGCGGTGCAAGCGGCGGTGTGCAAGCT
CTCCAAGCAGCCGCCCAGGAACAGCATTTGGAGATTATGGGGTTGCTGAC
CAGCACCGGAGTGGTTGATACGGGTTTAGCCCTACGAGCTGCCGCCGTGT
GTGGCCAAGAGCGATCCATGAAGTTTCTGTTGCAGCAGCAAGAGTGGAAA
GCTAGTGGTCAAGGAGATGGCTACCTGGACGCCCCGGGCCGTTTCGGTGC
AACGCCCTTAGTATGTAGTATTCAGGCTTGCCGCTTATCATGCTCTCCCA
GAATCATGAGGTTGCTCGTGGATGCGGGAGCAGACACTACGACGACCGTT
CGACTAGCAGGCGCAGGGGGTGACGTGTTTTTCGATGACACGCCCCTGGC
TCTCGCGGACTTGTACCTCCGTAACAAGAAGATCAACGGAGAGGATGCCA
CAGAGAGCCAGCTCCACAGCGTGGAGGCTGCCCGGCGGTTGCTGATGAGG
GTGGAGGCTGTTCATGCGGTCTCTTGGTTGTGGGCAAGTGACGTCCCCTC
CTTTACGTATGCTAATGCAGAGGGTACGGGCGGCGCTACCGAGGCAACTT
CGACCCCGCTGATGTTGATGATGCCGATCTTGAGAAGAAGGGCTGGAAGG
CCCAGGGTGCTCTTGGCCGCCCTGTTCAGATGAACGAACTGCACTTTGCC
GCGGGTGTTGGCTCCGCCGAGCGTACGATAGCTGTGCTCTCGAGGGGCGT
TGTCAGCGTCGATCACAGTACACCAGTGAAGGGCCGCACCCCTCTCATGC
TTGCCGCCAGCTTCGGTCATACGCAAGTTGTCAACATCCTCCTGAACAGG
GGAGCCAACGTGGCATTAGCGGATTATAATGGTTTCGCTGCTCTGCACCA
TGCCGCCGGCTTCGGTCATACGCAAGTTGTCAACATCCTCTTGAACAGGG
GAGCCAACGTGGCATTAGTGGATTATAATGGTTTCGCTGCTCTGCACCTG
ACGGCTCACCGAGGATTTTTGGCCGTGACGAAGCTGCTGGTGGAGGCCGG
CGCAGACCTGGAAGCAACGACCCCTTCAGGCTCCACACCGCTTCACCTGG
CTTCGGAGAAAGGGTACTCGGAGGTGATGAGAGTGCTGATCGAGGCAGGA
GCAAACCCCAACAGTCGTGCGATGGATGGTGCGACACCGCTGTGCATCGC
GGCTAATGATGGGCACGTGGGTGCGATCAAGGTGCTCTTTCGTGCGGGAG
CAGAGCCGCTGCTGACTTTTTCGAATCCAGGGGCTTCCCCCGTACCTCTG
GACGCGGCAACGAATGACGCCGTACCTCTGGACGCGGCAGCGAATAACGG
GCACTTAGCAGTTGCACGCGAGCTGATTCAGCACTTTGGGATCGAGGGCT
GTGGCGGTGCAAGCGGCGGTGTGCAAGCTCTCCAAGCAGCCGCCCAGGAA
CAGCATTTGGAGATTATGGGGTTGCTGACCAGCACCGGAGTGGTTGATAC
GGGTTTAGCCCTACGAGCTGCCGCCGTGTGTGGCCAAGAGCGATCCATGA
AGTTTCTGTTGCAGCAGCAAGAGTGGAAAGCTAGTGGTCAAGGAGATGGC
TACCTGGACGCCCCGGGCCGTTTCGGTGCAACGCCCTTAGTATGTAGTAT
TCAGGCTTGCCGCTTATCATGCTCTCCCAGAATCATGAGGTTGCTCGTGG
ATGCGGGAGCAGACACTACGACGACCGTTCGACTAGCAGGCGCAGGGGGT
GACGTGTTTTTCGATGACACGCCCCTGGCTCTCGCGGACTTGTACCTCCG
TAACAAGAAGATCAACGGAGAGGATGCCACAGAGAGCCAGCTCCACAGCG
TGGAGGCTGCCCGGCGGTTGCTGATGAGGGTGGAGGCTGTTCATGCGGTC
TCTTGGTTGTGGGCAAGTGACGTCCCCTCCTTTACGTATGCTAATGCAGA
GGGTACGGGCGGCGCTACCGAGGCAACTTCGACCCCGCTGATGTTGATGA
TGCCGATCTTGAGAAGAAGGGCTGGAAGGCCCAGGGTGCTCTTGGCCGCC
CTGTTCAGGAATTCGAAGAAGCCTTGAGAATTCGAAGAAGCCTTGA
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