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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-12_004490.1 |
| Exons | 2 |
| Model size | 689 |
| Cds size | 687 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815340.6294086-CDS-L-elsbetiae_contig11298:2233..2888 | 1622815340.6294086-CDS-L-elsbetiae_contig11298:2233..2888 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11298 2234..2888 - |
| 1691682848.3479185-CDS-L-elsbetiae_contig11298:2233..2888 | 1691682848.3479185-CDS-L-elsbetiae_contig11298:2233..2888 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11298 2234..2888 - |
| 1622815340.6388383-CDS-L-elsbetiae_contig11298:3533..3565 | 1622815340.6388383-CDS-L-elsbetiae_contig11298:3533..3565 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11298 3534..3565 - |
| 1691682848.3605378-CDS-L-elsbetiae_contig11298:3533..3565 | 1691682848.3605378-CDS-L-elsbetiae_contig11298:3533..3565 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig11298 3534..3565 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11298.1152.1 >prot_L-elsbetiae_contig11298.1152.1 ID=prot_L-elsbetiae_contig11298.1152.1|Name=mRNA_L-elsbetiae_contig11298.1152.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
LQAGAHPEDRWLDFVRPLDERIPSDDEEEEDDDKDDDSYKDDTESAASLS
QSQSRSSWQKGGATSRGTLSRPRPPRAGKTRGRGKEGDDPTTDDGSEGRR
GKGTRANRGEGGGDEGGGAGGRPTSPGDEAATATGDSVDENGEVMVTAVV
STSASSDREARYLQRRRNRGRAPTTAARTNASKNEKNAGSSSSQPAAAAL
AAGSPSRKSVRLERGRQTEGEWSVGKDSG back to topmRNA from alignment at L-elsbetiae_contig11298:2233..3565- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig11298.1152.1 ID=mRNA_L-elsbetiae_contig11298.1152.1|Name=mRNA_L-elsbetiae_contig11298.1152.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1333bp|location=Sequence derived from alignment at L-elsbetiae_contig11298:2233..3565- (Laminarionema elsbetiae ELsaHSoW15)
CTCCAGGCCGGGGCGCATCCGGAAGACCGGTGGTGAGTGAACCGGCGGCG
GCAGCAGTGGCGGCAGCAGTGTTGATTATTGATTTCAGGTTACGGCTTCC
GTGTTCACCTTGTTATACGTGCTATGTACCTCCTACACGCGGAGTTTCCG
AGGCATCGTGTTGTGGCATGCTTTCGTATCCACGTGATCCTTCTTACCAG
TACCCACGCTGCTCTGGAAAGCTCAGTTTATTTCTGTGTGTCTCGTCCCC
AGCAAGCGAGCTCTTTCTCGGGTTGTATACGGACGCATAAACCGCGCGGC
TTGGCATTTAACCCTTGTAAAAACAGGCGGGGCGTGTGAGCGGTTGACCA
GCACAATGAAATACTACCGGACGCTCGGCGGCTGGCTCGCGCCCCCGATC
TGTTTGGCCGCGCCGCAGTCCTTTGCGTAAAGTGTACGTTCACGGTGTCC
GAAATGCCTGTGTGTGTATCCCTCCCCACGGTTGGGTGCCTCTTCGTGTA
TGTGTGTGTGCCATTTGTGTGGCGTCACCCGCGCAAACTGATTGGCCAAT
GAATCGTCTGTCACAGGCTAAACGTGCGCGCCTGTGTGCTTGTGTGCGTA
TACACCCACCTCTTTCCCCTTTCCTTCTCTTCTCTTCCCTTCCCTTCCCT
TCCCTTCCCTGTGGTGTGCTTTTCCAGGCTGGACTTCGTGCGGCCTCTAG
ACGAGCGGATACCCAGCGACGACGAGGAAGAAGAGGACGACGACAAGGAC
GACGACAGCTACAAGGACGACACGGAGAGCGCCGCATCGCTGTCCCAGTC
GCAATCTCGAAGCTCTTGGCAAAAAGGCGGCGCCACCTCCCGCGGAACAT
TGTCCAGGCCCCGACCGCCGAGAGCAGGAAAGACGCGCGGACGGGGAAAG
GAGGGCGACGACCCAACCACGGACGACGGTAGCGAGGGCCGCAGAGGGAA
GGGAACCAGGGCAAACAGAGGAGAAGGAGGTGGAGACGAAGGCGGAGGCG
CTGGAGGGAGGCCCACCTCCCCGGGGGACGAGGCTGCTACCGCGACCGGG
GATAGCGTCGACGAGAACGGCGAGGTCATGGTCACGGCGGTGGTGTCGAC
TTCGGCGTCAAGCGACCGCGAAGCGCGATACCTCCAGCGGCGCCGCAACA
GAGGTAGAGCACCGACGACAGCCGCGCGAACGAACGCTTCGAAGAACGAA
AAGAACGCAGGGTCGTCATCATCTCAGCCCGCGGCGGCGGCGTTGGCGGC
GGGGAGCCCGTCTCGGAAGAGCGTCAGGTTGGAGCGGGGGCGACAGACGG
AAGGAGAGTGGAGTGTGGGCAAGGACAGCGGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig11298:2233..3565- >mRNA_L-elsbetiae_contig11298.1152.1 ID=mRNA_L-elsbetiae_contig11298.1152.1|Name=mRNA_L-elsbetiae_contig11298.1152.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig11298:2233..3565- (Laminarionema elsbetiae ELsaHSoW15)
CTCCAGGCCGGGGCGCATCCGGAAGACCGGTGCTCCAGGCCGGGGCGCAT
CCGGAAGACCGGTGGCTGGACTTCGTGCGGCCTCTAGACGAGCGGATACC
CAGCGACGACGAGGAAGAAGAGGACGACGACAAGGACGACGACAGCTACA
AGGACGACACGGAGAGCGCCGCATCGCTGTCCCAGTCGCAATCTCGAAGC
TCTTGGCAAAAAGGCGGCGCCACCTCCCGCGGAACATTGTCCAGGCCCCG
ACCGCCGAGAGCAGGAAAGACGCGCGGACGGGGAAAGGAGGGCGACGACC
CAACCACGGACGACGGTAGCGAGGGCCGCAGAGGGAAGGGAACCAGGGCA
AACAGAGGAGAAGGAGGTGGAGACGAAGGCGGAGGCGCTGGAGGGAGGCC
CACCTCCCCGGGGGACGAGGCTGCTACCGCGACCGGGGATAGCGTCGACG
AGAACGGCGAGGTCATGGTCACGGCGGTGGTGTCGACTTCGGCGTCAAGC
GACCGCGAAGCGCGATACCTCCAGCGGCGCCGCAACAGAGGTAGAGCACC
GACGACAGCCGCGCGAACGAACGCTTCGAAGAACGAAAAGAACGCAGGGT
CGTCATCATCTCAGCCCGCGGCGGCGGCGTTGGCGGCGGGGAGCCCGTCT
CGGAAGAGCGTCAGGTTGGAGCGGGGGCGACAGACGGAAGGAGAGTGGAG
TGTGGGCAAGGACAGCGGAGCTGGACTTCGTGCGGCCTCTAGACGAGCGG
ATACCCAGCGACGACGAGGAAGAAGAGGACGACGACAAGGACGACGACAG
CTACAAGGACGACACGGAGAGCGCCGCATCGCTGTCCCAGTCGCAATCTC
GAAGCTCTTGGCAAAAAGGCGGCGCCACCTCCCGCGGAACATTGTCCAGG
CCCCGACCGCCGAGAGCAGGAAAGACGCGCGGACGGGGAAAGGAGGGCGA
CGACCCAACCACGGACGACGGTAGCGAGGGCCGCAGAGGGAAGGGAACCA
GGGCAAACAGAGGAGAAGGAGGTGGAGACGAAGGCGGAGGCGCTGGAGGG
AGGCCCACCTCCCCGGGGGACGAGGCTGCTACCGCGACCGGGGATAGCGT
CGACGAGAACGGCGAGGTCATGGTCACGGCGGTGGTGTCGACTTCGGCGT
CAAGCGACCGCGAAGCGCGATACCTCCAGCGGCGCCGCAACAGAGGTAGA
GCACCGACGACAGCCGCGCGAACGAACGCTTCGAAGAACGAAAAGAACGC
AGGGTCGTCATCATCTCAGCCCGCGGCGGCGGCGTTGGCGGCGGGGAGCC
CGTCTCGGAAGAGCGTCAGGTTGGAGCGGGGGCGACAGACGGAAGGAGAG
TGGAGTGTGGGCAAGGACAGCGGA back to top
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