mRNA_L-elsbetiae_contig1116.1045.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 755 bits (1950), Expect = 2.860e-251 Identity = 385/513 (75.05%), Postives = 419/513 (81.68%), Query Frame = 3 Query: 1665 LTPGPLFDIHSEYCKSGRLNRDYLRFLWMYRKIEPPGPAVVLTDAEFESVVSTMARLLVMYTAPGADVLVVPARLREYGDQRVLTRDRIQDVVLTRQCSFGQVYPPPGIVGRFLAWSAQRVVDYEECWQHGAFFSYTFQHARYDVFLYESTFEEDHEDGTRCMFAGLVLGIQGPPPQAAEVLAELTASLDKLVSHKIHGYPGLTGLMYFRPAEKIESSLLVGLRSTLDNVGNLGNVAERMEVAAGXXXXXXXXXXETARKLGGIVTQLLEQKLLAATDEQGEYPRLVLVRPELELENEGGGTHERIQRAGWDRWTSALSDITLHKFRLHFLCEHDLSEVPCGPDGRGFPIEQPKDWVKQWLPLMQVSLWMLRVAVGVVSNVDLPLNEVLGAFVMATGAELLDGVGKVPERIDSAALPVFSEGATRAEIEGFKDLRGTAYEALCKFVRDVEPSPPQRLCGCFPCRRTLAVVDWRDHMVQVTNPHTGGRAWVLKTNEEAYVRERGGDPATARAPL 3203 L PLFDIH+ YC+SGRLNR YLRFLWM+RKIE PGP V LTD EFES+VSTM RLLVMYTA AD LVVPARL+EYGDQR+ DR+ ++VL +CSFGQVYPPPGIVGRFLAWSAQ+V DY ECWQHGAFFSY +Q+ARYDVFLYES EE H+DGT MFAGL LGIQGPPPQAAEVL EL SL+ LVS +GYPGL G MYFRPAE+IESSLLV L S LD XXXXX ET RKLGGIVTQLLEQ LL A+DEQ YPRLVLVRPELE + THERIQRAGWDRWT ALS++ HKFR+HFLC HDLSEVPCGP GRGFPI+ PKDWVKQWLPLMQVSLWMLRVAVG VSNVDLPLN+VLGAFVMATGAELL+GVGKVP+RI SAALPVFSEGATRAE++GFKDLRG +YE LCKF+RDVE SPPQ L GC PC RTLAVVDWRDHMVQV NP TG RAWVLKTNE+A++RE GG PATA AP+ Sbjct: 660 LAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRI--PDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGPMYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXX---XXXXXSLEETVRKLGGIVTQLLEQDLLPASDEQSAYPRLVLVRPELETAEDM--THERIQRAGWDRWTKALSEMGFHKFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVGKVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPCHRTLAVVDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHGGAPATAGAPV 1165
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 246 bits (629), Expect = 1.060e-62 Identity = 175/515 (33.98%), Postives = 249/515 (48.35%), Query Frame = 3 Query: 1680 LFDIHSEYCKSGRLNRDYLRFLWMYRKIEPPGP--AVVLTDAEFESVVSTMARLLVMYTAPGA-----DVLVVPARLREYGDQRVLTRD-RIQDVVLTRQCSFGQVYPPPGIVGRFLAWSAQRVVDYEECWQHGAFFSYTFQHARYDVFLYESTFEEDHEDGTRCMFAGLVLGIQGPPPQAAEVLAELTASLDKLVSHKIHGYPGLTGLMYFRPAEKIESSLLVGLRSTLDNVGNLGNVAERMEVAAGXXXXXXXXXXETARKLGGIVTQLLEQKLLAATDEQGEYPRLVLVRP-------ELELENEGGGTHERIQRAGWDRWTSALSDITLHKFRLHFLCEHDLSEVPCGPDGRGFPIEQPKDWVKQWLPLMQVSLWMLRVAVGVVSNVDLPLNEVLGAFVMATGAELLDGVGKVPERIDSAALPVFSEGAT--RAEIEGFKDLRGTAYEALCKFVRDVEPSPPQRLC-GCFPCRRTL------AVVDWRDHMVQVTNPHTGGRAWVLKTNEE 3152 L + H+ + + GRLNRDYLRFLW++RK+E G L F+S+V TM + L +Y + G D +VPARL E+G+ +L + +VV+ + F + + P GI+GRFLA+++ R +CWQHGA + +DV L E+T E+D G + F + + ++G +A VL E+ L L+ IHGYPGL L F +S V +A E+ R + L YPRLVL++P E + E G + R WDRW F L FLCE D SE+PCGP G+GF + P PL+Q +LW++++AVG V++VDLPL++VL AF+ AT AE+L+ AA FS AT + EGFK+L G AY+ALC F+ E P + C C P R + DWR HM + N G +WV K++E+ Sbjct: 1653 LCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDAFDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEESIGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPG-QSTFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLR-LPIFEELNITQSDQF--------------QVHFERYLATQLAKILEDTRRESVRMFRAAFPSYGDPVELP-------YPRLVLLKPVETTSIQETQAEESVNGAIQL--RRTWDRWIDLCRSGGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVLE-----------AAPSQFSPSATLDEGQQEGFKELHGPAYKALCDFMTKEEFGPEEARCESCLPWYRPRVHEPIPSEFDWRSHMEMIKNGI--GYSWVRKSSEQ 2129
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.630e-59 Identity = 169/515 (32.82%), Postives = 249/515 (48.35%), Query Frame = 3 Query: 1680 LFDIHSEYCKSGRLNRDYLRFLWMYRKIEPPG--PAVVLTDAEFESVVSTMARLLVMYTAPGA-----DVLVVPARLREYGDQRVLTRD-RIQDVVLTRQCSFGQVYPPPGIVGRFLAWSAQRVVDYEECWQHGAFFSYTFQHARYDVFLYESTFEEDHEDGTRCMFAGLVLGIQGPPPQAAEVLAELTASLDKLVSHKIHGYPGLTGLMYFRPAEKIESSLLVGLRSTLDNVGNLGNVAERMEVAAGXXXXXXXXXXETARKLGGIVTQLLEQKLLAATDEQGEYPRLVLVRP-------ELELENEGGGTHERIQRAGWDRWTSALSDITLHKFRLHFLCEHDLSEVPCGPDGRGFPIEQPKDWVKQWLPLMQVSLWMLRVAVGVVSNVDLPLNEVLGAFVMATGAELLDGVGKVPERIDSAALPVFSEGAT--RAEIEGFKDLRGTAYEALCKFVRDVEPSPPQ-RLCGCFPCRRT------LAVVDWRDHMVQVTNPHTGGRAWVLKTNEE 3152 L + H+ + + GRLNR YLRFLW++RK+E G V L + F+S+V TM + L +Y + G +VPARL E G VL + +VV+ + F + + P GI+G FLA+++ R ECWQHGA + +D+ L E+T E+D G + A + + ++G +A VL E+ L L+ IH + E L L + L++ E+ R E L YPRLVL++P E ++E+ G ++++R WDRW F L LCE D SE+PCGP G+GF + P PL+Q +LW++++AVG V++V LPL++VL AF+ AT AE+L+ AA FS AT + EGFK+L G AY+ALC F+R E P + + C C P R L+ DWR HM ++ N G +WV K++E+ Sbjct: 207 LCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEESIGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGTLPA-IAICVKGKTAEAKGVLREVGEQLLSLLKDVIHVH--------------FERYLATKLATILEDTRR-----------------------ESVRMFRAAFPSYGEHVELL-------YPRLVLLKPVETTSIQETQVESVSGA--KKLRRT-WDRWIDLCWSGGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVLE-----------AAPSQFSPSATLDEGQQEGFKELHGPAYKALCDFMRKEEFGPEEAQCCPCLPWHRPRVHEPILSEFDWRSHMYKIKNGV--GYSWVRKSSEQ 660
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 211 bits (536), Expect = 6.270e-52 Identity = 180/563 (31.97%), Postives = 253/563 (44.94%), Query Frame = 1 Query: 148 MAQTDRDALIALHNATDGPNWNTNANWSTDADLSEWYGVKLNGEGRVAELSLDYNNLRGPIPPELGILTALTYLDLE------------------------------------------------RNQLSEIPPELLELCRGNLGEPSWSY--NPWSRPPSTVLDSGYESALGWWEDVKRFGEGKSNRLKTVLVGLAEAGKTTVVRHFTGGTVPNRLD-RTVGIEI-TPDWRPLIEGPLQVNIWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVESGVDNFTDPRRRIFWWLEMLHMRVPGAAIALVGSHVDDMEKEGVDADLAGSRLYTVVSKFIQDKAGN--ASKRQSNRCIDAESTTTTXXXXXXXTEIDHLRVAQRSGSSKFVAKPLVLHDHVFKVSLAPSSVFELRQWIVKAASGRECPPEFNFPAVDQTVSNAWIKAYDAMDVLK-GTAP--------------------CVLWNRAVEEFS---KTMSTSLPDAGDAGKVLLRAMQHREAEGGVLLSLADASAPVATDMVHLDPSWLIELVRRLADHNLVD 1602 MA TD DAL+AL++ATDG NW N NW TD DLS+WYGV+LN +GRVA L+L NNLRG IP EL LT L L L S+IP E + + E S NPW PP V+ G++ + + E + + G LK VLVG AGKTT+ R G + L RT GI++ W P + PL+V IWDFAG DY+S+HQ+FLT GAL LLVVDLH F ++V S ++ WL+ L RVPG+A+ +V +H D + + A L V++ ++ K + A+KR R + +++ + T D + S + + P LH F +S++ S+ L K P F P+V + V W + + MD L G P V +A E +S + +T L AG G+ L R + R + + L S ++HL+PSW+ L+R + DH L D Sbjct: 1 MAATDYDALVALYHATDGANWKQNRNWITDTDLSQWYGVELNDQGRVACLNLYSNNLRGLIPKELEALTMLEQLLLAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDIPGATAERLKA-MPELSVDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSRGGG-------VYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPAS-------TGRDFM---SESPADRSKPAPPSLHLCGF-ISVSGRSLDGLSTVGEKIWEVANEPAVF--PSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQL-RLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTD 541
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 162 bits (410), Expect = 6.720e-37 Identity = 134/449 (29.84%), Postives = 207/449 (46.10%), Query Frame = 1 Query: 457 NPWSRPPSTVLDSGYESALGWWEDVKRFGEGKSNRLKTVLVGLAEAGKTTVVRHFTG----GTVPNRLDRTVGIEITPDWRPLIEGP----------LQVNIWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVESGVDNFTDPRRRIFWWLEMLHMRVPGAAIALVGSHVDDMEKEG-----VDADLAGSRLYTVVSKFIQDKAGNASKRQSNRCIDAESTTTTXXXXXXXTEIDHLRVAQRSGSSKFVAKPLVLHDHVFKVSLAPS---SVFELRQWIVKAASGRECPPEFNFPAVDQTVSNAWIKAYDAMDVLK---------------------GTA-----PCVLWNRAVEEFSKTMSTSLPDAGDA---GKVLLRAMQHREAEGGVLLSLADASAPVATDM-------VHLDPSWLIELVRRLADHNLVDNDKKKRGTV 1629 NPW+ PP+ VL G A + +D++ FG SNRLK VLVGL AGKT+V G +P+ +RTVG+EI D R L GP L V +WDFAGQ YY +HQ+FLT GALF+LVVD+ A+S++ S D WL++L RVPG+ + L+G+H D + VD + G L + FI + G+ K ++R H V + ++ +V+ + ++L+PS + ELR+ I A G ++FP+V+ V + A ++ ++ GT P VL+ A+ F + G A +V L A++ E +G +LL+ AD + DM +H++P+W +L+RR+ D L+D + ++ V Sbjct: 13 NPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIR-DIR-LGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGE-LLPLYKNFIMKRIGDECKAAADR--------------------GHAGVQD---NRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVH--DGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEME-DMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKV 425
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 154 bits (390), Expect = 2.770e-34 Identity = 133/469 (28.36%), Postives = 209/469 (44.56%), Query Frame = 1 Query: 457 NPWSRPPSTVLDSGYESALGWWEDVKRFGEGKSNRLKTVLVGLAEAGKTTVVRHFT---GGTVPNRLDRTVGIEITPDWRPLIEGP------------LQVNIWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVESGVDNFTDPRRRIFWWLEMLHMRVPGAAIALVGSHVDDMEKEGVDADLAGSRLYTVVSKFIQDKAGNASKRQSNRCIDAESTTTTXXXXXXXTEIDHLRVAQRSGSSKFVAKPLVLHDHVFKVSLAPSS---VFELRQWIVKAA-SGRECPPEFNFPAVDQTVSNAWIKAYDAMDVLKGTAPC-------------------------VLWNRAVEEFSKT-------MSTSLPDAGDAGKVLLRAMQHREAEGGVLLSLAD--------------ASAPVATDMVHLDPSWLIELVRRLADHNLVDNDKKKRGTVEQGLRAYAKLCTS 1668 NPW PP+ V++ G A + D+ +G SNRLK VLVGL EAGKT++ G + P +RTVG+EI R + GP L V++WDFAGQ YY +HQ+FLT GALF+LVVD+ ++ E +S D WLE+L RVPG+ + LVG+H D + + R V + + R C A+ T T++ G+ ++ +VL + + + L S + L+Q + A +G + ++FP+V V ++ A ++ ++ A V ++ AV F+K +S AG+ ++ L A++ EA G +LL+ D A+A A ++H++PS +LVRR+ D LVD +++ VE+ + A CTS Sbjct: 321 NPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEI----RDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYT-EGQSREDALEQ-------WLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMT--------RLRCECDSAKDRVETELGEGHTTDL--------KGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYD---GYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVD--PRQQAKVEEAMEA----CTS 752
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 153 bits (386), Expect = 7.860e-34 Identity = 126/447 (28.19%), Postives = 199/447 (44.52%), Query Frame = 1 Query: 457 NPWSRPPSTVLDSGYESALGWWEDVKRFGEGKSNRLKTVLVGLAEAGKTTVVRHFTG----GTVPNRLDRTVGIEITPDWRPLIEGP----------LQVNIWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVESGVDNFTDPRRRIFWWLEMLHMRVPGAAIALVGSHVD------DMEKEGVDADLAGSRLYTVVSKFIQDKAGNASKRQSNRCIDAESTTTTXXXXXXXTEIDHLRVAQRSGSSKFVAKPLVLHDHVFKVSLAPS---SVFELRQWIVKAASGRECPPEFNFPAVDQTVSNAWIKAYDAMDVLK--------GTAPCVLWNRAVEE----------FSKTMSTSLPDAGDAG----------KVLLRAMQHREAEGGVLLSLADASA------PVATD--MVHLDPSWLIELVRRLADHNLVDNDKKKR 1620 NPW+ PP+ VL+ G A + +D+ FG SNRLK VLVGL AGKT+V G +P +RTVG+EI L GP L V +WDFAGQ YY +HQ+FLT GALF+LVVD+ A+S++ S D WL++L RVPG+ + LVG+H D D K + D G + + Q+ AGN+ + A S ++ +V+ D + ++L PS + +L++ A G ++FP+V+ V + A ++ ++ G P + R E F + +S L AG+ + L A+ E +G +L++ AD P + ++H++P+W +L+RR+ D L+D ++++ Sbjct: 185 NPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDI--QLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDI-MDRVGRECKSARERARQESAGNSDREY----------------------------AGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVH--DGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEK 591
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 141 bits (355), Expect = 2.880e-30 Identity = 130/480 (27.08%), Postives = 202/480 (42.08%), Query Frame = 1 Query: 457 NPWSRPPSTVLDSGYESALGWWEDVKRFGEGKSNRLKTVLVGLAEAGKTTVVRHFT---GGTVPNRLDRTVGIEIT-----PDWRPLIEGP---LQVNIWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVESGVDNFTDPRRRIFWWLEMLHMRVPGAAIALVGSHVDDMEKEGVDADLAGSRLYTVVSKFIQDKAGNASKRQSNRCIDAESTTTTXXXXXXXTEIDHLRVAQRSGSSKFVAKPLVLHDHVFKVSLAPSSVFEL----RQWIVKAASGRECPPEFNFPAVDQTVSNAWIKAYDAMDVLK---------GTAPCVLWN---------RAVEEFSKTMSTSLPDAGDAG------------------------------------KVLLRAMQHREAEGGVLLSLAD--------------ASAPVATDMVHLDPSWLIELVRRLADHNLVDNDKKKRGTVEQGLRA 1647 NPW PP+ V+ G A + D+ +G SNRLK VLVGL AGKT++ GG PN +RTVG+EI P GP L V++WDFAGQ YY +HQ+FLT+GALF+LVVD+ A+++ P + WL++L RVPGA + LVG+H D E + R V K + KR S +C A++ T R G+ + +VL + + + L S ++ R+ A +G + ++F +V V ++ ++ ++ GT V+ R+ FS+ +S ++ ++ L A++ EA G +LL+ D A+A A ++H++PS +LVRR+ D LVD +++ VEQ + A Sbjct: 26 NPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAEG--------HSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIM--------KRISCQCDSAKNLAETELGE---------RHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYD---GYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVD--PRQQVKVEQAMAA 475
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.870e-26 Identity = 125/453 (27.59%), Postives = 199/453 (43.93%), Query Frame = 1 Query: 457 NPWSRPPSTVLDSGYESALGWWEDVKRFGEGKSNRLKTVLVGLAEAGKTTVVRHFTG---GTVPNRLDRTVGIEITPDWRPLIEGP------------LQVNIWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEVESGVDNFTDPRRRIFWWLEMLHMRVPGAAIALVGSHVD-------------DMEKEGVDADLAGSRLYTVVSKFIQDKAGNASKRQSNRCIDAESTTTTXXXXXXXTEIDHLRVAQRSGSSKFVAKPLVLHDHVFKVSLAPSS-----VFELRQWIVKAASGRECPPEFNF-PAVDQTVSNAWIKAYDAMDVLKGTAPCVLWNRAVEEFSKT--------MSTSLPDAGDAGKVLLRAMQHREAEGGVLLSLAD--------------ASAPVATDMVHLDPSWLIELVRRLADHNLVDNDKKKRGTVEQGLRA 1647 NPW PP+ V++ G + +D+ +G NRLK VLVGL EAGKT++ G + P +RTVG+EI R + GP L V++WDFAGQ YY +HQ+FLT GALF+LVVD+ F+ EV ++ + WLE+L RVPG+ + LVG+H D D KEG + + S + +S + D + R C A+ T++ G+ ++ +VL + + ++LA S + + R + G + + AV Q + K + V ++ AV F+ +S S + ++ L A++ EA G + L+ D A+A A ++H++PS +LVRR+ D LV +++ VE+ + A Sbjct: 66 NPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEI----RDIKLGPGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDM--FTYEVGQSKEDALEQ------WLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEG-RSYCSTSSNNSYLSPWPTD-VDDIMTRMRYECDSAKDRAEAELGEGHTTDL--------KGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNGGADLRGSGSTREAVAQRLREGNPKKRRSF---------VRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVA--PRQQAKVEEAMEA 485
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 8.660e-19 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 145 TMAQTDRDALIALHNATDGPNWNTNANWSTDADLSEWYGVKLNGEGRVAELSLDYNNLRGPIPPELGILTAL 360 TMAQTDR AL+AL+NAT G W N NW+T A LS+W+GV++N +GRV +LSL +NNLRGPIP ELG L+ L Sbjct: 70 TMAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRL 141 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1116.1045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1116.1045.1 >prot_L-elsbetiae_contig1116.1045.1 ID=prot_L-elsbetiae_contig1116.1045.1|Name=mRNA_L-elsbetiae_contig1116.1045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=525bp MAQTDRDALIALHNATDGPNWNTNANWSTDADLSEWYGVKLNGEGRVAELback to top mRNA from alignment at L-elsbetiae_contig1116:3031..10205- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1116.1045.1 ID=mRNA_L-elsbetiae_contig1116.1045.1|Name=mRNA_L-elsbetiae_contig1116.1045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7175bp|location=Sequence derived from alignment at L-elsbetiae_contig1116:3031..10205- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1116:3031..10205- >mRNA_L-elsbetiae_contig1116.1045.1 ID=mRNA_L-elsbetiae_contig1116.1045.1|Name=mRNA_L-elsbetiae_contig1116.1045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3150bp|location=Sequence derived from alignment at L-elsbetiae_contig1116:3031..10205- (Laminarionema elsbetiae ELsaHSoW15)back to top |