mRNA_L-elsbetiae_contig11155.1041.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11155.1041.1
Unique NamemRNA_L-elsbetiae_contig11155.1041.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: D7FMQ4_ECTSI (Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ4_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 1.890e-138
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 1 
Query:   25 ENGGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAPPAEDA 642
            ENGGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGME+APATSNNANLIDIKLSAAPP EDA
Sbjct:    6 ENGGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNANLIDIKLSAAPPTEDA 211
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BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: A0A7S2UZT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZT5_9STRA)

HSP 1 Score: 339 bits (870), Expect = 2.190e-116
Identity = 172/197 (87.31%), Postives = 184/197 (93.40%), Query Frame = 1 
Query:   37 APAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            +P VPQI PLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMY+ DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKW+EDVRNERGNDVV+MLVGNKTDL +RRQVSVEEGE+RAK+E IMFIETSAK GYN+KALF KLATALPGM++    + N N+IDIKLSAAP
Sbjct:   15 SPGVPQITPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYMPDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWVEDVRNERGNDVVIMLVGNKTDLSDRRQVSVEEGEERAKSEQIMFIETSAKAGYNVKALFNKLATALPGMDATQPLAPNTNMIDIKLSAAP 211
[Close]
BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: A0A836CM24_9STRA (Rab6, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM24_9STRA)

HSP 1 Score: 339 bits (869), Expect = 2.520e-116
Identity = 174/201 (86.57%), Postives = 189/201 (94.03%), Query Frame = 1 
Query:   34 GAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAPPAE 636
            G   +PQ+APLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLN+S+WI+DVR ERGN+VV+MLVGNKTDL +RRQVSVEEGED+AK EG+M IETSAK GYNIK LFRKLATALPGMESAP+T+++ NLIDIKLSA PP E
Sbjct:   12 GQSRIPQVAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNSSEWIKDVRAERGNEVVIMLVGNKTDLADRRQVSVEEGEDKAKKEGVMHIETSAKAGYNIKPLFRKLATALPGMESAPSTASS-NLIDIKLSAQPPEE 211
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BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: A0A6V1RZC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZC8_HETAK)

HSP 1 Score: 335 bits (858), Expect = 2.850e-114
Identity = 173/196 (88.27%), Postives = 183/196 (93.37%), Query Frame = 1 
Query:   40 PAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            P VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVR+ERGNDVV+MLVGNKTDL +RRQVS EEG DRA+AEG++F E SAK G N+K +FR+LA ALPGMESAP TSN ANLIDIKL A+P
Sbjct:   35 PGVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRSERGNDVVIMLVGNKTDLADRRQVSAEEGGDRAQAEGVIFAEASAKSGANVKGVFRQLAAALPGMESAPTTSN-ANLIDIKLQASP 229
[Close]
BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: K3WVM7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVM7_GLOUD)

HSP 1 Score: 328 bits (841), Expect = 8.080e-112
Identity = 173/220 (78.64%), Postives = 189/220 (85.91%), Query Frame = 1 
Query:    7 TLTRNRENGGAPA--------VPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAPPAEDA 642
            T    +E+GGA A        VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ ERRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME+  A S ++NLIDIKL+AAP  ++A
Sbjct:   10 TAAETQESGGADAGVVANTVSVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISERRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENT-AISGDSNLIDIKLTAAPAPKEA 228
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BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: A0A4D9D1C8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1C8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 3.070e-111
Identity = 167/195 (85.64%), Postives = 181/195 (92.82%), Query Frame = 1 
Query:   43 AVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            ++PQI  LAKYKLVFLGDQ VGKTSIITRFMYD F+KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVRNERGNDV++MLVGNKTDL +RRQVS EEGED+AK + IMFIETSAK G+NIK LFRKLATALPGMESA  T  +ANLIDIKL+AAP
Sbjct:   15 SLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQ-TQGSANLIDIKLAAAP 208
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BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: A0A8K1CRQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRQ3_PYTOL)

HSP 1 Score: 323 bits (829), Expect = 6.450e-110
Identity = 166/199 (83.42%), Postives = 180/199 (90.45%), Query Frame = 1 
Query:   31 GGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            GG+  VPQIAPLAKYKLVFLGDQ VGKTSIITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK G+NIKALFRKLAT LPGME+  A S ++NLIDIKL+AAP
Sbjct:   31 GGSVTVPQIAPLAKYKLVFLGDQGVGKTSIITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGFNIKALFRKLATVLPGMENT-AISGDSNLIDIKLTAAP 228
[Close]
BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: W7U9T7_9STRA (Small gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9T7_9STRA)

HSP 1 Score: 326 bits (836), Expect = 7.420e-110
Identity = 167/195 (85.64%), Postives = 181/195 (92.82%), Query Frame = 1 
Query:   43 AVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            ++PQI  LAKYKLVFLGDQ VGKTSIITRFMYD F+KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW++DVRNERGNDV++MLVGNKTDL +RRQVS EEGED+AK + IMFIETSAK G+NIK LFRKLATALPGMESA  T  +ANLIDIKL+AAP
Sbjct:  108 SLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQ-TQGSANLIDIKLAAAP 301
[Close]
BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: T0QYI2_SAPDV (Ras-like protein Rab-6A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QYI2_SAPDV)

HSP 1 Score: 322 bits (825), Expect = 1.060e-109
Identity = 164/191 (85.86%), Postives = 176/191 (92.15%), Query Frame = 1 
Query:   55 IAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            IAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK G+NIKALFRKLAT LPGME+ PA + +ANLIDIKLSAAP
Sbjct:   12 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDIADRRQVSIEEGADKAKEENVMFIETSAKAGHNIKALFRKLATVLPGMETTPAAATDANLIDIKLSAAP 202
[Close]
BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Match: A0A5D6XJX8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJX8_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.910e-109
Identity = 165/197 (83.76%), Postives = 179/197 (90.86%), Query Frame = 1 
Query:   37 APAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANLIDIKLSAAP 627
            A +VPQIAPLAKYKLVFLGDQ VGKTS+ITRFMYD FD  YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+ YDITNRASFLNTSKWIEDVR ERG DVV+MLVGNKTD+ +RRQVS+EEG D+AK E +MFIETSAK GYNIKALFRKLAT LPGME+  A S ++NLIDIKL+AAP
Sbjct:   34 AVSVPQIAPLAKYKLVFLGDQGVGKTSVITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVAYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGADKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENT-AISGDSNLIDIKLTAAP 229
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11155.1041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ4_ECTSI1.890e-13899.03Rab6, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UZT5_9STRA2.190e-11687.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CM24_9STRA2.520e-11686.57Rab6, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RZC8_HETAK2.850e-11488.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WVM7_GLOUD8.080e-11278.64Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A4D9D1C8_9STRA3.070e-11185.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8K1CRQ3_PYTOL6.450e-11083.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7U9T7_9STRA7.420e-11085.64Small gtp-binding protein n=1 Tax=Nannochloropsis ... [more]
T0QYI2_SAPDV1.060e-10985.86Ras-like protein Rab-6A n=4 Tax=Saprolegniaceae Ta... [more]
A0A5D6XJX8_9STRA1.910e-10983.76Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11155contigL-elsbetiae_contig11155:16..4642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score398.7
Seed ortholog evalue1.8e-108
Seed eggNOG ortholog2880.D7FMQ4
Preferred nameRab6
KEGG koko:K07893,ko:K07976
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005911,GO:0006810,GO:0006890,GO:0006891,GO:0008150,GO:0009506,GO:0012505,GO:0016020,GO:0016192,GO:0016197,GO:0016482,GO:0017076,GO:0019001,GO:0030054,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042147,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055044,GO:0071944,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:1901265,GO:1901363
EggNOG free text desc.retrograde vesicle-mediated transport, Golgi to ER
EggNOG OGsKOG0094@1,KOG0094@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131,ko04147
Ec32 ortholog descriptionRab6, RAB family GTPase
Ec32 orthologEc-23_001190.1
Exons6
Model size642
Cds size642
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11155.1041.1prot_L-elsbetiae_contig11155.1041.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11155 16..4642 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815329.520112-CDS-L-elsbetiae_contig11155:15..451622815329.520112-CDS-L-elsbetiae_contig11155:15..45Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 16..45 -
1691682842.2056453-CDS-L-elsbetiae_contig11155:15..451691682842.2056453-CDS-L-elsbetiae_contig11155:15..45Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 16..45 -
1622815329.5302763-CDS-L-elsbetiae_contig11155:1012..10991622815329.5302763-CDS-L-elsbetiae_contig11155:1012..1099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 1013..1099 -
1691682842.2182543-CDS-L-elsbetiae_contig11155:1012..10991691682842.2182543-CDS-L-elsbetiae_contig11155:1012..1099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 1013..1099 -
1622815329.5393696-CDS-L-elsbetiae_contig11155:2236..23231622815329.5393696-CDS-L-elsbetiae_contig11155:2236..2323Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 2237..2323 -
1691682842.226557-CDS-L-elsbetiae_contig11155:2236..23231691682842.226557-CDS-L-elsbetiae_contig11155:2236..2323Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 2237..2323 -
1622815329.5491357-CDS-L-elsbetiae_contig11155:2710..28161622815329.5491357-CDS-L-elsbetiae_contig11155:2710..2816Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 2711..2816 -
1691682842.2347803-CDS-L-elsbetiae_contig11155:2710..28161691682842.2347803-CDS-L-elsbetiae_contig11155:2710..2816Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 2711..2816 -
1622815329.558256-CDS-L-elsbetiae_contig11155:3674..38091622815329.558256-CDS-L-elsbetiae_contig11155:3674..3809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 3675..3809 -
1691682842.242893-CDS-L-elsbetiae_contig11155:3674..38091691682842.242893-CDS-L-elsbetiae_contig11155:3674..3809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 3675..3809 -
1622815329.569025-CDS-L-elsbetiae_contig11155:4445..46421622815329.569025-CDS-L-elsbetiae_contig11155:4445..4642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 4446..4642 -
1691682842.2509735-CDS-L-elsbetiae_contig11155:4445..46421691682842.2509735-CDS-L-elsbetiae_contig11155:4445..4642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11155 4446..4642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11155.1041.1

>prot_L-elsbetiae_contig11155.1041.1 ID=prot_L-elsbetiae_contig11155.1041.1|Name=mRNA_L-elsbetiae_contig11155.1041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp
MRTLTRNRENGGAPAVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFD
KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVA
VIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVE
EGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMESAPATSNNANL
IDIKLSAAPPAEDA
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mRNA from alignment at L-elsbetiae_contig11155:16..4642-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11155.1041.1 ID=mRNA_L-elsbetiae_contig11155.1041.1|Name=mRNA_L-elsbetiae_contig11155.1041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4627bp|location=Sequence derived from alignment at L-elsbetiae_contig11155:16..4642- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTACCCTAACCCGAAACAGAGAGAACGGCGGGGCACCGGCGGTGCC
TCAGATCGCCCCCCTCGCCAAGTACAAGCTGGTGTTCCTGGGGGACCAGA
GCGTGGGAAAGACGAGCATAATCACTCGGTTCATGTACGACAACTTCGAC
AAGAACTACCAGGCAACCATCGGGATCGACTTCCTCTCCAAGACGATGTG
AGTTGTGTTGACTCGCGTGCGTACATATGTACGTCGCTGCACGGCACGGC
ACAACACGGGACCCCCCTTAGAAACACAAAGCACATGTGCGGCTTTGTGG
TTCCATGGTTTTGATTGATTTGTACCTCGTCGACAAGGATTGGTTTCAAT
GGTAGTTTCGGAGGCGGTACCGCGAGGGTCGCCGACGGCAGATAGATATA
CCAGTCATGTAGCTTTCGTATGTGCATAACAGGTCTCGTACTTTTGATAT
ATACGTTCCTACCTGTGGTGGTGTGCATTACACTTGGGCTTCCTTGCCTG
CGAGACGCTAGGCTACCGTAGGTGACATAAGATAAGACACCCCCTGGACC
GATTTTGAAAGCTTGGTTACTCCGCAACGAATACGATTCTAACCACAAAC
GCAACATTTTTGGAAAGCTCTCGGCGAGATCTTTCCAATGCCGCCCTTTT
TCCGGGACTGACGCTCTGCTTGCTGTGGAGTTCTTGAGCTTTGAAAATCT
GTCCAGGGGGTGTGCTATCTTGTGTCAACGGTAGGGCCCTAGAGCGTCTC
TGCTACTGCTGTGTGGCCTCTGTTCAAGCCGCGGCTCTCCGGTGTGTGTG
TGTGTATGTGTGTGTGCGTGCGTTGTGTTGCAGGTACTTGGAAGACCGCA
CGGTGCGGCTGCAGCTTTGGGATACCGCCGGGCAGGAGCGGTTCCGGTCT
CTCATCCCCAGCTATATCAGAGACTCTTCTGTGGCGGTGATCGTGTACGA
CATCACCAACAGGGCGAGGTGGGCTGGTTCAAGTGTTGCGCTGCTGCTGC
TGCTGTTGGTGTTGTTGATGCTGTTGCTCTGCTGTGGTAGGTAGGGTGTT
GGATGACGTGGTACCGCCAGAGGTTTCCGCGGAGGCGTGTGTCTCTCCCA
GTGCCGCCACTTCGGCAAGGCGGGCATATCTCGTCCCTTAATAGGGGGGG
GGGGGTGAGTGCTGTCTACTCTTTCGCTCGGTTAAAACATATCTTTGCAG
GCGCAAGCAAATGGTTGCATATCTCTTCTACAGGTGCAAAGCAAGCGCGT
CAGCGACCCCCGCGACGCACAGCAGTCGAGCGTGGTATTGGGGGACCGAT
TTGTTCTCGACTCTCGGAGAGTGATCTATCTTGCCTGTCAATGCGAGCAC
CCCCGATTCCGCCAACTCCGTCGGCCAACCACATAGTCTTTCCCGCCGTT
TTAGGTACCGTAGGTGACATAAGATAAGACACCCCCTTGACCGATTTTCA
AAGCTCAAGAACTCCACAGCAAGCAGAGGGTCAGTCCCGAAAAGGGCGGC
GTTGGCAAGATCTCGTCGTGAGCTTTCCGAAAATGTGGCGTTCGTGGTTA
GAATCGTATTCGTTGCGGAGTAACCAAGCTTTCAATATCGGTCCAGGGGG
TGTCTTATCTTATGTCACCTACGATAAGAAAGAAAATTGTAGACGACCAC
AGCGAACGACATGTAAACTGGCGGCGTCAAGCGAAGTCTAGAACCGTTCC
TAGGAACGGTTCCTAGTTAGACCCGTCTCCCGAACTGGCGGTCTGATTTT
GGCTGGTCGCGTTCCTCTGCGCTGTTCTTGCCGTGTCTGTTTTTTGCGTT
GTGTTGTGTTGTGTTGTGTTGGACAGCTTCCTGAATACAAGCAAGTGGAT
CGAAGACGTCCGTAACGAACGGGGGAACGATGTGGTGATGATGCTGGTCG
GAAACAAGACCGACCTCAAGGAGCGGCGACAGGTTCGTCTTTTGGTGTTG
TTGTTGTTGTTGTTGTTTTTGTTGTTGTGTCGTTTTTGCTGTGCTGTTGT
TACTATGCTGTTGTTGCTGCTGTTATTGTTTTTGTTATTGTTGCTGCTGT
GCTGTTGTTGTTTTTTTTCTTCTTTTTTTTTGTTGTTTTTGTTGTTGTAT
TGTTGCTGTGCTGTTGTTGTTGCTGCTGTTACTGTTTTTGTTGTTGTTGC
TGTGCTGTTGTTGTTGTGGTTGTGGTTTTTGTGGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGCTGGTGCTGGTGCTGGTGCTGGTGCTGCCGCCGCCG
CCGCTGCCGCCGCCGCCGCCGCTGAAGCTGCTGTGGATCACTAACCACGG
TCTGTTTGTATTGTTTCAGGTGTCTGTAGAAGAGGGGGAGGACCGAGCTA
AGGCGGAGGGGATAATGTTCATCGAGACAAGCGCCAAGGGGGGCTACAAC
ATCAAGGTAAAACGGTGCCCCCACGGTGTTTTTTCTCCTCCCGATGATGC
TACTGTGTGCCCCCTGCTTTTTACACACAGCGAGGACAGAGCGCCCTTGG
CCGCAAAGAAACACACTGGGGTCGGGCGGGGCCAAGATAACCTAACCCCA
TTCTGTCCTCGGAAACCTTGTTGCGACGCTTTCCTCCCTACGTGCTGGTT
CTCTTTCGCTCTCTCCATGCTGGTTTTATTTCGCGATTGAAAGTGTTTTC
TGTGTGGGTCCGTGTAAGAAGCGTCGGCGGATGCCACAAAACCACCAGGA
GAGCAAGGGACCAAAAGCGGCGCGGAGCCTACCCCGCTTCTAAAAACCGG
AACAGACGAGAAGGATATGTTGGAGAACGGAATACGGAACATGGGACGCG
GAAATTTAGTCGCATTTGTCCCGCCCAATCCGGGGCCCGGTTGCAGCTAT
ATACTTACGGATGCAGCATGTTGTTGAAAACAACCCGCGGAACACTGCAC
TACGGAGTACTGAATGCACATATGTATGTAGCACGCAAAACGCGAAATAT
GGAATGCGGAACGCCTTTCCATGGTGAACGGACGGAGAAGGGGCTATTGG
GCGGAATGTGGAGGTACAAAGCCGGGTTTGCAGATGTTGAGCTAGCCGGT
CGCTCGGGCTAAGACGAATTGGGAGGAAACTTCCACAACAAGGGCTCTTG
CGTCCACCAATAACGCTGCTTGTTGCATGATTTCGTGTCCCAAGTGATCC
ACACAAACCAGCACAAAAATGCACGCTTCCTCCTCGCCTGGTACGGGACT
CGGGAGAGACGGGGGGGTAGGGGGTCAGGGGGGGCGTGTTGTATGATTGA
ATCGGCGTACCCCCGAAAAACACGCCTTTGTATTTCGTAATATCTCATCC
GTCCCGGTTTGTGTCACCTTGTTGTGTTGTGCCGTCTTGTGTTGGGGGTG
GAGGGGTGCCGTGTACGATTGGGAATCGGCTTCCACACTCCTGAACGTGT
GTGTCGACAAGCCGTCAGATGCTCGTAGCCATCTATCCCATCGTGTGAGC
AAGCCGTCAGATGCTCGAAGCCATCTCATCCATCCCGGTTTGCGTCACCT
CATTTTGCGCTGTACTGCTCTGTGTTTTGCTGTGGCGTCCCAGGCGTTGT
TTCGGAAGCTCGCGACGGCGCTGCCGGGGATGGAGAGCGCGCCTGCCACG
TCCAATAATGCGAATTTGATCGACATCAAGGTCCGCTGAAATAATACAGA
CAGATACGCAGCGGTCGTGCCATTCCAGTTCATTTTCGCTTGCCAATTTT
GTCGTCTGGCCTCTGCCTTTCCCCCTTATGTTTTGCTTCCTCTGGGGTGT
GTGTGTCCGAGTGGCCGTCGGAAGTCCTTACTCTCTGACGGTGCTTGTTT
CGTGTTTGTTTTGTTCTTTTATTTATCTTTCATGCGAATCTTTGTCACTG
CTAGCTAGCCTAGCTAGCTAGCTAGCTACCGTCAGGGGGCGTCGGGCGGC
CCGGCTCCGTATGTGTCTTGGTGTAGATTTTCAAAGCTCGGTTACTCTTG
CAACGAGTATGATTATAATACATACCAAACGACACGTTTTCGGGCAGAGA
GCTCTCGACGAGATATTTCCAATGCCGCCCTTTTCGGGACGGACACCCTT
TTTCTCTCGCCGCGGAGTACATACTTGAGCCTTAAAAACCGGCCCAGCGG
GTGTGTTGTCGTGTGTGCCGTATACGGTACTCAACAGCGCTAGCACCAAC
CACTTTTTCCATGTTCCGTGCGAGACCAATCGTGCTGAATATTTCACCCA
CCAGCCGCCTCTGCGGTGCATATCTTGTATTTACTTCGCACATGTAACAG
TTATTTAGTAAAAAACTCTTTTCCTTTCGCTTCGTCCATTTTTTTTCAAG
GCCCGTTTTTTGTTTAAACGCCATATACATTTATTGTTCATACCTTTCAT
TTATGTACTTACGCTTGTGGGCTTGTTTGTGTGTGTGTGTGTGTGTGTGT
GTGCTCGATCCCATCCCATCCTGTCCCATCCCATCCCATCCCATCCCATT
GCATCCCATTCCATCGCATTCCATCCCATCCCATCCCATTCCATCCCTGG
CACGCGCCGCGCCGCCTCACTCATGGATTCCCCCCTTCGTTTCGTCTCGT
GTTTTTTTTTTTTTTTTTTGCCGACGGACCGACCCGACCCGCAACAGCTG
TCGGCTGCCCCCCCCGCAGAAGACGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11155:16..4642-

>mRNA_L-elsbetiae_contig11155.1041.1 ID=mRNA_L-elsbetiae_contig11155.1041.1|Name=mRNA_L-elsbetiae_contig11155.1041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig11155:16..4642- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTACCCTAACCCGAAACAGAGAGAACGGCGGGGCACCGGCGGTGCC
TCAGATCGCCCCCCTCGCCAAGTACAAGCTGGTGTTCCTGGGGGACCAGA
GCGTGGGAAAGACGAGCATAATCACTCGGTTCATGTACGACAACTTCGAC
AAGAACTACCAGGCAACCATCGGGATCGACTTCCTCTCCAAGACGATATG
CGTACCCTAACCCGAAACAGAGAGAACGGCGGGGCACCGGCGGTGCCTCA
GATCGCCCCCCTCGCCAAGTACAAGCTGGTGTTCCTGGGGGACCAGAGCG
TGGGAAAGACGAGCATAATCACTCGGTTCATGTACGACAACTTCGACAAG
AACTACCAGGCAACCATCGGGATCGACTTCCTCTCCAAGACGATGTACTT
GGAAGACCGCACGGTGCGGCTGCAGCTTTGGGATACCGCCGGGCAGGAGC
GGTTCCGGTCTCTCATCCCCAGCTATATCAGAGACTCTTCTGTGGCGGTG
ATCGTGTACGACATCACCAACAGGGCGAGGTACTTGGAAGACCGCACGGT
GCGGCTGCAGCTTTGGGATACCGCCGGGCAGGAGCGGTTCCGGTCTCTCA
TCCCCAGCTATATCAGAGACTCTTCTGTGGCGGTGATCGTGTACGACATC
ACCAACAGGGCGAGCTTCCTGAATACAAGCAAGTGGATCGAAGACGTCCG
TAACGAACGGGGGAACGATGTGGTGATGATGCTGGTCGGAAACAAGACCG
ACCTCAAGGAGCGGCGACAGCTTCCTGAATACAAGCAAGTGGATCGAAGA
CGTCCGTAACGAACGGGGGAACGATGTGGTGATGATGCTGGTCGGAAACA
AGACCGACCTCAAGGAGCGGCGACAGGTGTCTGTAGAAGAGGGGGAGGAC
CGAGCTAAGGCGGAGGGGATAATGTTCATCGAGACAAGCGCCAAGGGGGG
CTACAACATCAAGGTGTCTGTAGAAGAGGGGGAGGACCGAGCTAAGGCGG
AGGGGATAATGTTCATCGAGACAAGCGCCAAGGGGGGCTACAACATCAAG
GCGTTGTTTCGGAAGCTCGCGACGGCGCTGCCGGGGATGGAGAGCGCGCC
TGCCACGTCCAATAATGCGAATTTGATCGACATCAAGGCGTTGTTTCGGA
AGCTCGCGACGGCGCTGCCGGGGATGGAGAGCGCGCCTGCCACGTCCAAT
AATGCGAATTTGATCGACATCAAGCTGTCGGCTGCCCCCCCCGCAGAAGA
CGCGCTGTCGGCTGCCCCCCCCGCAGAAGACGCG
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