mRNA_L-elsbetiae_contig11154.1038.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.370e-21 Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 +FG A L HLRVVGARAFVH E + +KL RAWEGRLVGYS DS++YRIYN+ TR+V E+RN FIET PP+ Sbjct: 790 LFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPS 864
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.420e-21 Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 +FG A L HLRVVGARAFVH E + +KL RAWEGRLVGYS DS++YRIYN+ TR+V E+RN FIET PP+ Sbjct: 1019 LFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPS 1093
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.240e-21 Identity = 49/75 (65.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 +FG A L HLRVVGARAFVH E + +KL RAWEGRLVGYS DS++YRIYN+ TR+V E+RN FIET PP+ Sbjct: 696 LFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPPS 770
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 4.310e-21 Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 ++G+ A L HLRV+G+RAFVH E + KL+ RAWEGRLVGYS DS++YRIYNS TR+V +RN FIETP PA Sbjct: 260 LYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETPPVAPA 334
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.470e-20 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 +FG A L H RVVGARAFVH E + +KL RAWEGRLVGYS DS++YRIYN+ TR+V E+RN FIET +PP+ Sbjct: 46 LFGTDAHLGHPRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPSPPS 120
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5JRS9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS9_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.550e-20 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETP 210 M+G++A LS LRV+GAR+FV+YERY +KL DR +EG+L G+S+DS+ YRIYN T VVE+RN TFIETP Sbjct: 1141 MYGKEADLSRLRVIGARSFVNYERYTKKLSDRTFEGKLCGFSRDSKTYRIYNPATGNVVESRNVTFIETP 1210
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 9.890e-20 Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPAAA 231 ++G+ A L HLRV+G+RAFVH E + KL+ RAWEGRLVGYS DS++YRIYNS TR+V +R FI+TP PA A Sbjct: 729 LYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRIVVFIKTPPVAPALA 805
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5KL30_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL30_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.350e-19 Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 ++G+ A L H RV+G+RAFVH E + KL+ AWEGRLVGYS DS++YRIYNS TR+ +RNF FIETP PA Sbjct: 448 LYGKDAYLGHNRVIGSRAFVHEETHTRKLEHLAWEGRLVGYSTDSKSYRIYNSETRRARVSRNFVFIETPPVAPA 522
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 2.360e-19 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIE 204 MFG+QA L HLRV+G+ AFVH E Y+ KL +RAW G L+GYS DSRAYR++N T+++V +RN TFIE Sbjct: 203 MFGKQASLRHLRVIGSTAFVHLETYKSKLANRAWPGILIGYSPDSRAYRVFNPRTKRIVHSRNVTFIE 270
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 6.330e-19 Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 1 MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIYNSTTRQVVENRNFTFIETPDTPPA 225 ++G+ A L HLRV+G+RAFVH + KL+ RAWEGRLVGYS S++YRIYNS TR+V +RN FIETP PA Sbjct: 811 LYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETPPIAPA 885 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11154.1038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11154.1038.1 >prot_L-elsbetiae_contig11154.1038.1 ID=prot_L-elsbetiae_contig11154.1038.1|Name=mRNA_L-elsbetiae_contig11154.1038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MFGEQAVLSHLRVVGARAFVHYERYREKLQDRAWEGRLVGYSKDSRAYRIback to top mRNA from alignment at L-elsbetiae_contig11154:3426..3797+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11154.1038.1 ID=mRNA_L-elsbetiae_contig11154.1038.1|Name=mRNA_L-elsbetiae_contig11154.1038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=372bp|location=Sequence derived from alignment at L-elsbetiae_contig11154:3426..3797+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11154:3426..3797+ >mRNA_L-elsbetiae_contig11154.1038.1 ID=mRNA_L-elsbetiae_contig11154.1038.1|Name=mRNA_L-elsbetiae_contig11154.1038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig11154:3426..3797+ (Laminarionema elsbetiae ELsaHSoW15)back to top |