mRNA_L-elsbetiae_contig11152.1036.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11152.1036.1
Unique NamemRNA_L-elsbetiae_contig11152.1036.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 5.040e-47
Identity = 202/345 (58.55%), Postives = 235/345 (68.12%), Query Frame = -1
Query:   23 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIK---YSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIG---QPREPPSRRPR 1039
            A+GG+A VV  L RAGA AD +A+ P  G TPLH+A +GG  A AKAL MA ADVN+ D     XXXXXXXXXXXXXXXXXXXXXXXXXXX                D++V+ALA K   L   G  E  PL  A  ++++STVRVLLA GA+AN P     Y  TVLHF AE +  +AI  L++AGA++++      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ET V   GS+P   +P++A A +ED  RLERLSKLL  APQDR+WRRRGFL +CR H DRLRL +E+P  A EA G   Q +E PSRR R
Sbjct:   54 AKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLE--GVAE-PPLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRAR 395          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 3.250e-44
Identity = 184/339 (54.28%), Postives = 219/339 (64.60%), Query Frame = -1
Query:   62 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGAD-----ANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGAD--------ETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEA 1039
            AEGGN  V+ +L RAGAG D  AK    G TPL +A IGGK+AAAKALIMAGADVN  D +      XXXXXXXXXXXXXXXXXXXXXXXX           A+ GLDEVV+AL +K   LN L ++  TPL +A   ++++TV+VLL+EGAD     AN P+K    +LH  A+ N+  AI AL +AG NIE  +SS              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 ET V+ +       M  +A ++E  RP  ER+SKLLA APQDR+WRRRGFLV+CR H DR+RL +++P  AAEA
Sbjct:   78 AEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLK----LLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRV-------MQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEA 405          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 6.600e-35
Identity = 112/328 (34.15%), Postives = 145/328 (44.21%), Query Frame = -1
Query:   29 GAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLC-----IAALEENLSTVRVLLAEGADANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGL-MPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPPSRR 994
            GAG D  AK P    TPL +   GGK+AAAKALIMAGAD ++    EH                              NG++PIH AA  GLDEVV+A+ +K   LN L  +   PL      IAA E   + +RVL   GAD    +   Q      ++ N+ +   +   +  N +A                                                       LLL WG DE  + S G +   + M  +A A    RP LERLS+LLA APQDR+WRRRGFLV+ R H DR+RL +E+P  AA+A  QP++ P RR
Sbjct:   46 GAGGDIKAKAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMW---EHRVAKDLLLSGANPIQAGS------------NGNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAG-----------------------------------------------------LLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRR 305          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 3.190e-32
Identity = 143/338 (42.31%), Postives = 168/338 (49.70%), Query Frame = -1
Query:   38 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALE---ENLSTVRVLLAEGADANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLM-PSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPP 1039
            AEGGN  V+  L RAGAG D  AK    G TPL +A +GGK AAA+ALIMAGADVN+ D     XXXXXXXXXXXXXXXXXXXXXXXXXXX                        +K   LN L  +  TPL +A +    E  + +R L   GAD   P    +T L   A      AI                XXXXXX                                            DLLLRWGADET V   G +   ++   +A A E   P LER+SKLLA APQDR+WRRRGFLV+CR H+DR+RL +E+P  AAEA   P++ P
Sbjct:   81 AEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKGIDLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXCACFFCHHDAA---------------------------------DLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAAEATEGPQQRP 385          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 7.340e-32
Identity = 92/248 (37.10%), Postives = 118/248 (47.58%), Query Frame = -1
Query:   23 GDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANF-PIKYSQTVLHFMAECNKTMAIAALVDAGANIEAES-SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPS-VAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPPSRRPR 757
            G +PIH AA+ GLDEVV++L  K      +  RE T L +A    +++ +  LLAEGAD NF   +    + H  A  N   A+ AL  AG  IE  S                                                     DLLLRWGADET V S   +   +M   +  A    R RLER+S+LLA APQDR+WRRRGFLV C +H DR++L +E+P+ A EAI Q +E P R  R
Sbjct:   25 GWFPIHFAAHHGLDEVVVSLFHKGIDPTCVTTREETHLLLAVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHAR 272          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.030e-31
Identity = 107/328 (32.62%), Postives = 143/328 (43.60%), Query Frame = -1
Query:   44 LIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSS-PKG------LMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPRE 1006
            L RAGAG D  AK    G TPL +A +GG +AAA+ALIMAGAD+N+ D                                  NG++PIH  A +G DEV + L QK   LN +    RTPL +A  E ++STV+VLLAEGAD N     S  +L                    +IE  +S                                                     LL+ GA+  +  + G   PKG      ++  +A       PRLE +S+LL  APQDR+WRRRGF+V+ R   +R+RL +E+P  AAEA  QP++
Sbjct:   45 LRRAGAGGDMKAKTLDTGHTPLDLAVVGGNEAAAEALIMAGADMNVLDVKNDGLLHLTITGGHAGS----------------NGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIERRTPLYVAVRENHVSTVKVLLAEGADPN-----SLNLLLMXXXXXXXXXXXXXXXXXXDIERRTSRESTPLHATAAFGSCAAMLT---------------------------------LLQLGANVNSKENRGKPRPKGKAAISVVIRCMAETRAASLPRLEHVSELLVPAPQDRAWRRRGFVVLRRALPNRVRLAVEIPARAAEATEQPQQ 318          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5L7V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V4_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 1.940e-28
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = -1
Query:   23 DLLLRWGADETTVTSLGSSPKGL-MPSVAGATE---EDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPPSRRPR 310
            DLLLRWGADET V   G +P     P+ A   E   E+R   +RLSKLL HAPQDRSWRRRGFLVMCRTHQDRLRL ++VPD AA AI Q  EPPSR+ R
Sbjct:   35 DLLLRWGADETVVDDEGHTPYSYHFPAGADEAEWDEENRRTYKRLSKLLTHAPQDRSWRRRGFLVMCRTHQDRLRLVVDVPDTAATAIRQTSEPPSRQAR 134          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5K8L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L4_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.860e-24
Identity = 137/342 (40.06%), Postives = 170/342 (49.71%), Query Frame = -1
Query:   23 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIKY-SQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVA-GATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEA-IGQPREPPSRRPR 1039
            AEGGN  VV  L R GAG  +D K+     TPLH+A   G    A+ L+++GAD+N++  +                                 G +                                +PL  A  ++ +ST+RVLLAEGAD      Y S+TVL   A+ NK  AI AL +AGA+IE+  +                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              S G +P   +P++A  A E  R RLER SK L  APQDR+WRRRGFLV+CR H DR+RL +E+P  AAEA + Q  E PS R R
Sbjct:    7 AEGGNVHVVSLLHRTGAGV-RDEKR----HTPLHLAVQEGHVEIAEYLLLSGADLNLQGST---------------------------------GAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNISPLERAICQDRMSTLRVLLAEGADVTHRRYYDSETVLQLAAKLNKVAAIPALTEAGADIESPDAFGRTPLYSSAVHGSFSSMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSQGKTPSFYIPAIAEDADEGHRKRLERRSKRLTRAPQDRAWRRRGFLVLCRAHPDRVRLMVEIPKTAAEASVQQLLERPSCRAR 310          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 3.750e-18
Identity = 122/355 (34.37%), Postives = 160/355 (45.07%), Query Frame = -1
Query:   98 GGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPN-----GDYPIHCAAYWGLDEVVIALAQKDGR----LNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPI--------------------------------KYSQTVLHFMAECNKTMAIAALVDAGANIEAE--SSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLR 1033
            GGN  VV  L+RAG   D +        + LH++A+ G +AAA+ LI+AGAD N  D      XXXXXXXXXXXXXXXXXXXXXXXXXX PN     G  P+H AAY G D VV  L          L++ G    +PL +A+   +LSTV+ LL  GAD +                                   K+  T LH     N+  A+  L+DAGA+++ +   +S                                                  DLLLRWG  E T+   G++P  L+    G++      +ER   LLA+AP DR+WRRR +LVM R   +R R
Sbjct:   77 GGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVD----PAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGL---SPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERER 424          
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.820e-18
Identity = 121/319 (37.93%), Postives = 148/319 (46.39%), Query Frame = -1
Query:  107 GAEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIKYSQTVLHFMAE-CNKTMAIA------ALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQD 1042
            GAEGG+ QV+  L RAGAG   + + PL G TPLH+A  GGK AA K L++AGADVN  D    XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        LC A    ++STV V L  G     P   S+T +      C  T +I+      AL+  GA++ A+                                                     DLLLRWGADET V   G++   ++P +  A EE+ P + RL+KLL  A QDR+WRRRG LVMCR H +
Sbjct:   77 GAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPT--SKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAA--------------------------------DLLLRWGADETAVDWNGATTSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAHPE 361          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KB54_9PHAE5.040e-4758.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2A3_ECTSI3.250e-4454.28Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JU78_9PHAE6.600e-3534.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G292_ECTSI3.190e-3242.31Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KFY7_9PHAE7.340e-3237.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYJ2_9PHAE1.030e-3132.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7V4_9PHAE1.940e-2865.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8L4_9PHAE1.860e-2440.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBP9_ECTSI3.750e-1834.37Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7FM65_ECTSI3.820e-1837.93Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11152contigL-elsbetiae_contig11152:1601..2642 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1042
Cds size606
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11152.1036.1prot_L-elsbetiae_contig11152.1036.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11152 1726..2331 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815329.0818486-UTR-L-elsbetiae_contig11152:1600..17251622815329.0818486-UTR-L-elsbetiae_contig11152:1600..1725Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11152 1601..1725 +
1691682842.0530655-UTR-L-elsbetiae_contig11152:1600..17251691682842.0530655-UTR-L-elsbetiae_contig11152:1600..1725Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11152 1601..1725 +
1622815329.1022787-UTR-L-elsbetiae_contig11152:2331..26421622815329.1022787-UTR-L-elsbetiae_contig11152:2331..2642Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11152 2332..2642 +
1691682842.0707757-UTR-L-elsbetiae_contig11152:2331..26421691682842.0707757-UTR-L-elsbetiae_contig11152:2331..2642Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11152 2332..2642 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815329.0914342-CDS-L-elsbetiae_contig11152:1725..23311622815329.0914342-CDS-L-elsbetiae_contig11152:1725..2331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11152 1726..2331 +
1691682842.0627432-CDS-L-elsbetiae_contig11152:1725..23311691682842.0627432-CDS-L-elsbetiae_contig11152:1725..2331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11152 1726..2331 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11152.1036.1

>prot_L-elsbetiae_contig11152.1036.1 ID=prot_L-elsbetiae_contig11152.1036.1|Name=mRNA_L-elsbetiae_contig11152.1036.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MTRKPLRRQDLSWGACASSLDRRSSLGRSSSVAPATLGIKPLGLLPKLVT
VVSSAPHRSSKSAASALPFLHATYRAVQPLCAFASTFTPSCSRESVAAHE
PALAAAWRGVLRLELSASILAPASTRAAMAMVLLHSAIKCRTVWEYLIGK
FASAPSARRTLTVERFSSSAAIQRGVLSRAPRRFRRPSFWAKAITTSSRP
Q*
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mRNA from alignment at L-elsbetiae_contig11152:1601..2642+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11152.1036.1 ID=mRNA_L-elsbetiae_contig11152.1036.1|Name=mRNA_L-elsbetiae_contig11152.1036.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1042bp|location=Sequence derived from alignment at L-elsbetiae_contig11152:1601..2642+ (Laminarionema elsbetiae ELsaHSoW15)
ACCTCGACTTTCACCTGGCCCCCCTGGGACGGCGGCTAGGGGGCTCTCGC GGCTGGCCGATCGCCTCAGCCGCCCCATCGGGAACCTCAATACATAGACG CAGCCTGTCTTGGTGCGTGCGGCACATGACGAGGAAGCCCCTGCGACGCC AGGATCTGTCTTGGGGGGCGTGCGCCAGCAGCTTGGACAGGCGTTCAAGC CTCGGGCGGTCTTCTTCGGTAGCTCCGGCGACGCTTGGCATCAAACCTTT GGGACTGCTGCCCAAGCTGGTAACGGTTGTTTCGTCAGCACCCCATCGTA GCAGCAAGTCCGCGGCGTCGGCTTTGCCGTTCTTGCACGCGACATACAGG GCGGTCCAGCCGCTCTGTGCTTTCGCGTCGACTTTCACTCCCAGTTGTAG CAGAGAAAGCGTAGCCGCGCACGAGCCGGCCCTAGCTGCAGCGTGGAGGG GTGTTCTCCGGCTGGAACTCTCCGCTTCGATATTGGCCCCGGCATCGACG AGAGCTGCGATGGCCATGGTCTTGTTACATTCGGCCATAAAATGCAGGAC AGTCTGGGAGTATTTAATCGGAAAGTTCGCATCTGCACCCTCCGCCAGGA GAACTCTCACGGTGGAAAGGTTTTCCTCCAGCGCCGCGATACAGAGGGGC GTCCTCTCGCGTGCGCCAAGGCGGTTCAGACGGCCATCCTTTTGGGCCAA AGCGATCACTACCTCATCCAGGCCCCAGTAGGCAGCGCAGTGAATAGGGT AGTCACCGTTGGGATACTTGGCGCTGGGATCGGCTCCGCTAAGCAGCAGG GTGTCAGCAAGCCCCCCATGACTACCTTCGATGGCAAGGTGCAGGGGGGT GTGTTCGCTGAAGTCGCGGATGTTCACGTCAGCTCCGGCCATAATCAGCG CCTTTGCCGCGGCCTGCTTCCCGCCAATAGCTGCCATATGAAGCGGAGTG CTGCCAATCAAGGGCTTCTTTGCGTCCTTGTCTGCTCCTGCGCCAGCCCT GATCAACGCCCTGACCACTTGCGCGTTACCGCCCTCAGCTCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11152:1601..2642+

>mRNA_L-elsbetiae_contig11152.1036.1 ID=mRNA_L-elsbetiae_contig11152.1036.1|Name=mRNA_L-elsbetiae_contig11152.1036.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig11152:1601..2642+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGAGGAAGCCCCTGCGACGCCAGGATCTGTCTTGGGGGGCGTGCGC
CAGCAGCTTGGACAGGCGTTCAAGCCTCGGGCGGTCTTCTTCGGTAGCTC
CGGCGACGCTTGGCATCAAACCTTTGGGACTGCTGCCCAAGCTGGTAACG
GTTGTTTCGTCAGCACCCCATCGTAGCAGCAAGTCCGCGGCGTCGGCTTT
GCCGTTCTTGCACGCGACATACAGGGCGGTCCAGCCGCTCTGTGCTTTCG
CGTCGACTTTCACTCCCAGTTGTAGCAGAGAAAGCGTAGCCGCGCACGAG
CCGGCCCTAGCTGCAGCGTGGAGGGGTGTTCTCCGGCTGGAACTCTCCGC
TTCGATATTGGCCCCGGCATCGACGAGAGCTGCGATGGCCATGGTCTTGT
TACATTCGGCCATAAAATGCAGGACAGTCTGGGAGTATTTAATCGGAAAG
TTCGCATCTGCACCCTCCGCCAGGAGAACTCTCACGGTGGAAAGGTTTTC
CTCCAGCGCCGCGATACAGAGGGGCGTCCTCTCGCGTGCGCCAAGGCGGT
TCAGACGGCCATCCTTTTGGGCCAAAGCGATCACTACCTCATCCAGGCCC
CAGTAGATGACGAGGAAGCCCCTGCGACGCCAGGATCTGTCTTGGGGGGC
GTGCGCCAGCAGCTTGGACAGGCGTTCAAGCCTCGGGCGGTCTTCTTCGG
TAGCTCCGGCGACGCTTGGCATCAAACCTTTGGGACTGCTGCCCAAGCTG
GTAACGGTTGTTTCGTCAGCACCCCATCGTAGCAGCAAGTCCGCGGCGTC
GGCTTTGCCGTTCTTGCACGCGACATACAGGGCGGTCCAGCCGCTCTGTG
CTTTCGCGTCGACTTTCACTCCCAGTTGTAGCAGAGAAAGCGTAGCCGCG
CACGAGCCGGCCCTAGCTGCAGCGTGGAGGGGTGTTCTCCGGCTGGAACT
CTCCGCTTCGATATTGGCCCCGGCATCGACGAGAGCTGCGATGGCCATGG
TCTTGTTACATTCGGCCATAAAATGCAGGACAGTCTGGGAGTATTTAATC
GGAAAGTTCGCATCTGCACCCTCCGCCAGGAGAACTCTCACGGTGGAAAG
GTTTTCCTCCAGCGCCGCGATACAGAGGGGCGTCCTCTCGCGTGCGCCAA
GGCGGTTCAGACGGCCATCCTTTTGGGCCAAAGCGATCACTACCTCATCC
AGGCCCCAGTAG
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