mRNA_L-elsbetiae_contig11152.1036.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 174 bits (442), Expect = 5.040e-47 Identity = 202/345 (58.55%), Postives = 235/345 (68.12%), Query Frame = -1 Query: 23 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIK---YSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIG---QPREPPSRRPR 1039 A+GG+A VV L RAGA AD +A+ P G TPLH+A +GG A AKAL MA ADVN+ D XXXXXXXXXXXXXXXXXXXXXXXXXXX D++V+ALA K L G E PL A ++++STVRVLLA GA+AN P Y TVLHF AE + +AI L++AGA++++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ET V GS+P +P++A A +ED RLERLSKLL APQDR+WRRRGFL +CR H DRLRL +E+P A EA G Q +E PSRR R Sbjct: 54 AKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLE--GVAE-PPLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRAR 395
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 167 bits (424), Expect = 3.250e-44 Identity = 184/339 (54.28%), Postives = 219/339 (64.60%), Query Frame = -1 Query: 62 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGAD-----ANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGAD--------ETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEA 1039 AEGGN V+ +L RAGAG D AK G TPL +A IGGK+AAAKALIMAGADVN D + XXXXXXXXXXXXXXXXXXXXXXXX A+ GLDEVV+AL +K LN L ++ TPL +A ++++TV+VLL+EGAD AN P+K +LH A+ N+ AI AL +AG NIE +SS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ET V+ + M +A ++E RP ER+SKLLA APQDR+WRRRGFLV+CR H DR+RL +++P AAEA Sbjct: 78 AEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLK----LLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRV-------MQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEA 405
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 140 bits (353), Expect = 6.600e-35 Identity = 112/328 (34.15%), Postives = 145/328 (44.21%), Query Frame = -1 Query: 29 GAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLC-----IAALEENLSTVRVLLAEGADANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGL-MPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPPSRR 994 GAG D AK P TPL + GGK+AAAKALIMAGAD ++ EH NG++PIH AA GLDEVV+A+ +K LN L + PL IAA E + +RVL GAD + Q ++ N+ + + + N +A LLL WG DE + S G + + M +A A RP LERLS+LLA APQDR+WRRRGFLV+ R H DR+RL +E+P AA+A QP++ P RR Sbjct: 46 GAGGDIKAKAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMW---EHRVAKDLLLSGANPIQAGS------------NGNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAG-----------------------------------------------------LLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRR 305
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI) HSP 1 Score: 134 bits (338), Expect = 3.190e-32 Identity = 143/338 (42.31%), Postives = 168/338 (49.70%), Query Frame = -1 Query: 38 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALE---ENLSTVRVLLAEGADANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLM-PSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPP 1039 AEGGN V+ L RAGAG D AK G TPL +A +GGK AAA+ALIMAGADVN+ D XXXXXXXXXXXXXXXXXXXXXXXXXXX +K LN L + TPL +A + E + +R L GAD P +T L A AI XXXXXX DLLLRWGADET V G + ++ +A A E P LER+SKLLA APQDR+WRRRGFLV+CR H+DR+RL +E+P AAEA P++ P Sbjct: 81 AEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKGIDLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXCACFFCHHDAA---------------------------------DLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAAEATEGPQQRP 385
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 131 bits (330), Expect = 7.340e-32 Identity = 92/248 (37.10%), Postives = 118/248 (47.58%), Query Frame = -1 Query: 23 GDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANF-PIKYSQTVLHFMAECNKTMAIAALVDAGANIEAES-SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPS-VAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPPSRRPR 757 G +PIH AA+ GLDEVV++L K + RE T L +A +++ + LLAEGAD NF + + H A N A+ AL AG IE S DLLLRWGADET V S + +M + A R RLER+S+LLA APQDR+WRRRGFLV C +H DR++L +E+P+ A EAI Q +E P R R Sbjct: 25 GWFPIHFAAHHGLDEVVVSLFHKGIDPTCVTTREETHLLLAVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHAR 272
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE) HSP 1 Score: 132 bits (332), Expect = 1.030e-31 Identity = 107/328 (32.62%), Postives = 143/328 (43.60%), Query Frame = -1 Query: 44 LIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIKYSQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSS-PKG------LMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPRE 1006 L RAGAG D AK G TPL +A +GG +AAA+ALIMAGAD+N+ D NG++PIH A +G DEV + L QK LN + RTPL +A E ++STV+VLLAEGAD N S +L +IE +S LL+ GA+ + + G PKG ++ +A PRLE +S+LL APQDR+WRRRGF+V+ R +R+RL +E+P AAEA QP++ Sbjct: 45 LRRAGAGGDMKAKTLDTGHTPLDLAVVGGNEAAAEALIMAGADMNVLDVKNDGLLHLTITGGHAGS----------------NGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIERRTPLYVAVRENHVSTVKVLLAEGADPN-----SLNLLLMXXXXXXXXXXXXXXXXXXDIERRTSRESTPLHATAAFGSCAAMLT---------------------------------LLQLGANVNSKENRGKPRPKGKAAISVVIRCMAETRAASLPRLEHVSELLVPAPQDRAWRRRGFVVLRRALPNRVRLAVEIPARAAEATEQPQQ 318
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5L7V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V4_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.940e-28 Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = -1 Query: 23 DLLLRWGADETTVTSLGSSPKGL-MPSVAGATE---EDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEAIGQPREPPSRRPR 310 DLLLRWGADET V G +P P+ A E E+R +RLSKLL HAPQDRSWRRRGFLVMCRTHQDRLRL ++VPD AA AI Q EPPSR+ R Sbjct: 35 DLLLRWGADETVVDDEGHTPYSYHFPAGADEAEWDEENRRTYKRLSKLLTHAPQDRSWRRRGFLVMCRTHQDRLRLVVDVPDTAATAIRQTSEPPSRQAR 134
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: A0A6H5K8L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L4_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.860e-24 Identity = 137/342 (40.06%), Postives = 170/342 (49.71%), Query Frame = -1 Query: 23 AEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIKY-SQTVLHFMAECNKTMAIAALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVA-GATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLRLCIEVPDGAAEA-IGQPREPPSRRPR 1039 AEGGN VV L R GAG +D K+ TPLH+A G A+ L+++GAD+N++ + G + +PL A ++ +ST+RVLLAEGAD Y S+TVL A+ NK AI AL +AGA+IE+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S G +P +P++A A E R RLER SK L APQDR+WRRRGFLV+CR H DR+RL +E+P AAEA + Q E PS R R Sbjct: 7 AEGGNVHVVSLLHRTGAGV-RDEKR----HTPLHLAVQEGHVEIAEYLLLSGADLNLQGST---------------------------------GAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNISPLERAICQDRMSTLRVLLAEGADVTHRRYYDSETVLQLAAKLNKVAAIPALTEAGADIESPDAFGRTPLYSSAVHGSFSSMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSQGKTPSFYIPAIAEDADEGHRKRLERRSKRLTRAPQDRAWRRRGFLVLCRAHPDRVRLMVEIPKTAAEASVQQLLERPSCRAR 310
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 3.750e-18 Identity = 122/355 (34.37%), Postives = 160/355 (45.07%), Query Frame = -1 Query: 98 GGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPN-----GDYPIHCAAYWGLDEVVIALAQKDGR----LNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPI--------------------------------KYSQTVLHFMAECNKTMAIAALVDAGANIEAE--SSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQDRLR 1033 GGN VV L+RAG D + + LH++A+ G +AAA+ LI+AGAD N D XXXXXXXXXXXXXXXXXXXXXXXXXX PN G P+H AAY G D VV L L++ G +PL +A+ +LSTV+ LL GAD + K+ T LH N+ A+ L+DAGA+++ + +S DLLLRWG E T+ G++P L+ G++ +ER LLA+AP DR+WRRR +LVM R +R R Sbjct: 77 GGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVD----PAXXXXXXXXXXXXXXXXXXXXXXXXXXXPNARDLLGRTPLHRAAYMGQDMVVAVLTDMPSTDKDILDKSGL---SPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTERER 424
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 3.820e-18 Identity = 121/319 (37.93%), Postives = 148/319 (46.39%), Query Frame = -1 Query: 107 GAEGGNAQVVRALIRAGAGADKDAKKPLIGSTPLHMAAIGGKQAAAKALIMAGADVNIRDFSEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPNGDYPIHCAAYWGLDEVVIALAQKDGRLNRLGARERTPLCIAALEENLSTVRVLLAEGADANFPIKYSQTVLHFMAE-CNKTMAIA------ALVDAGANIEAESSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLLRWGADETTVTSLGSSPKGLMPSVAGATEEDRPRLERLSKLLAHAPQDRSWRRRGFLVMCRTHQD 1042 GAEGG+ QV+ L RAGAG + + PL G TPLH+A GGK AA K L++AGADVN D XXXXXXXXXXXXXXXXXXXXXXXXXXXX LC A ++STV V L G P S+T + C T +I+ AL+ GA++ A+ DLLLRWGADET V G++ ++P + A EE+ P + RL+KLL A QDR+WRRRG LVMCR H + Sbjct: 77 GAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPT--SKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAA--------------------------------DLLLRWGADETAVDWNGATTSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAHPE 361 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11152.1036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11152.1036.1 >prot_L-elsbetiae_contig11152.1036.1 ID=prot_L-elsbetiae_contig11152.1036.1|Name=mRNA_L-elsbetiae_contig11152.1036.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MTRKPLRRQDLSWGACASSLDRRSSLGRSSSVAPATLGIKPLGLLPKLVTback to top mRNA from alignment at L-elsbetiae_contig11152:1601..2642+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11152.1036.1 ID=mRNA_L-elsbetiae_contig11152.1036.1|Name=mRNA_L-elsbetiae_contig11152.1036.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1042bp|location=Sequence derived from alignment at L-elsbetiae_contig11152:1601..2642+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11152:1601..2642+ >mRNA_L-elsbetiae_contig11152.1036.1 ID=mRNA_L-elsbetiae_contig11152.1036.1|Name=mRNA_L-elsbetiae_contig11152.1036.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig11152:1601..2642+ (Laminarionema elsbetiae ELsaHSoW15)back to top |