mRNA_L-elsbetiae_contig1115.1034.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: D8LQ11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ11_ECTSI) HSP 1 Score: 233 bits (593), Expect = 6.820e-72 Identity = 135/182 (74.18%), Postives = 138/182 (75.82%), Query Frame = 1 Query: 1 RPASQVPEARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEG---AGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 537 R VPE RFLGSQAVIGPLREAYERNLFRW+H+ LVRANLEA LELKLPSPATTAKADYSADCGICYAYRL A G X XXXXXXXXXXXG AE+ GAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF Sbjct: 236 RAPGDVPEVRFLGSQAVIGPLREAYERNLFRWNHSLLVRANLEAALELKLPSPATTAKADYSADCGICYAYRLQRDDAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXTRXXXXXXXXXXXGAAAEDAGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 417
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: A0A6A3ZA97_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZA97_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.700e-38 Identity = 73/181 (40.33%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 4 PASQVPEARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKFTQG 546 P + + E F G+QA +G LRE + N RWD T ++ NLE LE+ LPSP TT +++ +CGICY YRL + RK+ E+ IPDR+C+NA C RP+H KCLF WL+ LPTSR SF T+FG+CPYC + IS KF G Sbjct: 246 PRALLSELSFFGNQASVGVLRERWGSNTSRWDETRSLQKNLEDVLEVTLPSPKTTKTEEFAVECGICYLYRLEDEDESNEEVQEDNQRKVE-----------------------------TEQGSRIPDRLCENANCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKFQPG 397
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: G5AAM0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AAM0_PHYSP) HSP 1 Score: 142 bits (358), Expect = 1.810e-37 Identity = 74/181 (40.88%), Postives = 97/181 (53.59%), Query Frame = 1 Query: 4 PASQVPEARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKFTQG 546 P + + E F G+QA +G LRE + N RWD T ++ NLE L + LPSP TT +++ +CGICY YRL + E G K G ++ AEE IP+R+C+N C RP+H KCLF WL+ LPTSR SF T+FG+CPYC + IS KF G Sbjct: 246 PTAMLSELSFFGNQANVGALRERWGSNASRWDETKSLQKNLENVLGVALPSPKTTKPEEFAVECGICYLYRLEG-EDESTGERKDGNQRKA----------------------------VAEEGSRIPNRLCENPNCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCRETISAKFQPG 397
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: M4BBE4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBE4_HYAAE) HSP 1 Score: 139 bits (350), Expect = 3.270e-36 Identity = 74/178 (41.57%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 4 PASQVPEARFLGSQAVIGPLREAYERNLF-RWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVK 534 PA+ E F G+Q +G LRE + + + RWD + ++ANLE L +KLPSP TT + +A+CGICYAYRL + E A+ G+ + S E +PDR+C+N KC RP+H KCL+ WL+ LPTSR SF TIFG+CPYC D IS K Sbjct: 250 PAAMPRELSFFGNQVSVGALRELWGSSAWSRWDESRSMQANLEDVLNIKLPSPTTTKLEELAAECGICYAYRLEDGKDETNNKAERGSGALPMQSESK-----------------------QERGSCLPDRLCENVKCNRPFHAKCLYDWLRALPTSRQSFHTIFGECPYCRDAISAK 404
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: D0NA27_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NA27_PHYIT) HSP 1 Score: 137 bits (346), Expect = 1.050e-35 Identity = 75/180 (41.67%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 4 PASQVPEARFLGSQAVIGPLREAYERNLF-RWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGA-IPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 537 P + + E F G+QA +G LRE + N RWD + NLE LEL LPSP TT +++ +CGICY+YRL + A RK EE G+ IPDR+C+N KC RP+H KCLF WL+ LPTSR SF T+FG+CPYC + IS KF Sbjct: 246 PTAVLTELNFFGNQASVGVLRERWGNNASSRWDELRPLHKNLEDVLELTLPSPKTTKAEEFAIECGICYSYRLEVEEGNEEEAKNPMQRKA------------------------------VEEQGSRIPDRLCENTKCNRPFHAKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKF 395
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: A0A3M6VQD3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQD3_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.370e-35 Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 1 Query: 4 PASQVPEARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAE------GAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 537 P + + E F G+QA +G LRE + RWD T ++ NLE L++ LPS TT +++ +CGICY+YRL + G+GA ++ R P E+ IPDR+C+NAKC RP+H KCLF WL+ LPTSR SF T+FG+CPYC + IS KF Sbjct: 257 PTAMLSELSFFGNQASVGALRERWGSASSRWDETRSLQENLEDVLKITLPSQKTTKPDEFAVECGICYSYRLEEEDEDTEETKQGSGATSM--QQKRAP----------------------------EQGSRIPDRLCENAKCNRPFHVKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKF 410
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: H3GXE1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXE1_PHYRM) HSP 1 Score: 136 bits (342), Expect = 4.130e-35 Identity = 70/179 (39.11%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 4 PASQVPEARFLGSQAVIGPLREAYERNLF-RWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 537 P + + + F G+QA +G LRE + N RWD ++ NLE LE+ LPSP TT +++ +CGICY+YRL + A +AG + E+ IPDR+C+N+ C RP+H KCLF WL+ LPTSR SF T+FG+CPYC + IS KF Sbjct: 245 PTAMLNDLSFFGNQASVGSLREKWGNNASSRWDENKSLQRNLEHVLEVTLPSPQTTKPEEFAVECGICYSYRLEGEDDDDDEAQEAGTASTQRN---------------------------TEQGSRIPDRLCENSNCNRPFHSKCLFDWLRALPTSRQSFHTVFGECPYCREAISAKF 396
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: A0A2P4X1Z8_9STRA (E3 ubiquitin-protein ligase FANCL-like n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X1Z8_9STRA) HSP 1 Score: 135 bits (340), Expect = 7.950e-35 Identity = 70/180 (38.89%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 1 RPASQVPEARFLGSQAVIGPLREAYERN-LFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 537 +P + + E F G++A +G LRE + N + +WD T ++ NLE LE+ LPSP TT +++ +CGICY+YRL + E K M+ + E+ IPDR+C+NA C RP+H KCLF WL+ LPTSR SF ++FG+CPYC + IS KF Sbjct: 244 QPTAMLRELSFFGNEASVGVLRERWGTNAVSKWDETRSLQKNLEEVLEVILPSPKTTKPEEFAVECGICYSYRL---EEENGEEVKDDVGSMQDKTTT-------------------------EQGSRIPDRLCENANCNRPFHAKCLFDWLRALPTSRQSFHSVFGECPYCREAISAKF 395
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: A0A8K1CHB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHB5_PYTOL) HSP 1 Score: 134 bits (338), Expect = 1.580e-34 Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 16 VPEARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLPPPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVK 534 V + RF G+++ I PLRE + +LF+W V NLE LE++LPSP T +++ +CGICY YRL E A+ G+ R + +IPDR+C+N KC RP+H KCLF WL+ LPT+R SF+T+FG+CPYC + IS K Sbjct: 254 VCDVRFYGNESSIAPLRERWSEHLFQWTEELSVPDNLERLLEIELPSPRVTKTDEFALECGICYCYRLEMEVDEPTEGAQDGSGAER------------------------------HVETSIPDRLCENVKCNRPFHEKCLFEWLKALPTARQSFNTVFGECPYCREAISAK 396
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Match: K3X2N1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2N1_GLOUD) HSP 1 Score: 134 bits (338), Expect = 1.610e-34 Identity = 67/174 (38.51%), Postives = 94/174 (54.02%), Query Frame = 1 Query: 22 EARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLPSPATTAKADYSADCGICYAYRLP--PPQAEGAGAAKAGARKMRGPCASSGGKGAAXXXXXXXXXXXXXXGGPAEEDGAIPDRVCDNAKCRRPYHPKCLFVWLQGLPTSRVSFDTIFGQCPYCSDPISVKF 537 E F G+ A +G LRE + +F+WD T +R NLE+ L+++ PSP T +++ +CGICY YRL P +E A R A+ IPD++C+N+KC RP+H KCLF WL+ LPT+R SF+T+FG+CPYC + IS KF Sbjct: 255 ELSFFGNDATVGSLREKWSEGVFQWDETLPLRDNLESILDVEFPSPTHTQADEFAIECGICYCYRLEMDAPSSEETTTATTAKRPHA-----------------------------AQPRTLIPDKLCENSKCNRPFHEKCLFDWLKALPTARQSFNTVFGECPYCREAISAKF 399 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1115.1034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1115.1034.1 >prot_L-elsbetiae_contig1115.1034.1 ID=prot_L-elsbetiae_contig1115.1034.1|Name=mRNA_L-elsbetiae_contig1115.1034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp RPASQVPEARFLGSQAVIGPLREAYERNLFRWDHTALVRANLEATLELKLback to top mRNA from alignment at L-elsbetiae_contig1115:25114..28777- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1115.1034.1 ID=mRNA_L-elsbetiae_contig1115.1034.1|Name=mRNA_L-elsbetiae_contig1115.1034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3664bp|location=Sequence derived from alignment at L-elsbetiae_contig1115:25114..28777- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1115:25114..28777- >mRNA_L-elsbetiae_contig1115.1034.1 ID=mRNA_L-elsbetiae_contig1115.1034.1|Name=mRNA_L-elsbetiae_contig1115.1034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig1115:25114..28777- (Laminarionema elsbetiae ELsaHSoW15)back to top |