mRNA_L-elsbetiae_contig11147.1032.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11147.1032.1
Unique NamemRNA_L-elsbetiae_contig11147.1032.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A6H5L9W6_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 9.100e-147
Identity = 204/248 (82.26%), Postives = 227/248 (91.53%), Query Frame = 3
Query:   78 MWRPPVVDMESPEAPNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRWRVTS 821
            MW PPVVDMESPEAP VLA ACK+FGFFYVENHGVS++VM EVFRQSKAFFSLGI DK+A+KAD++NRGFTPMHEEILDP++Q+KGDTKEGYYIFRE+   S     D ++DDARPLKGPNQWPSE+L+P W+ATMQ YF +MHA+GVRLSGLLS GLGL+PSFFE CTSEMAHALRLLHYSAEVSDP KGV+GAGAHSDYGLLTLLATDEVPGLQVRL+GEWLDVPPR+GAFICNLGDMLQRWRV +
Sbjct:    1 MWEPPVVDMESPEAPKVLAKACKEFGFFYVENHGVSKDVMREVFRQSKAFFSLGIDDKMALKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPS-----DGEEDDARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLNGEWLDVPPREGAFICNLGDMLQRWRVVT 243          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: D7FYW9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 2.720e-131
Identity = 187/244 (76.64%), Postives = 211/244 (86.48%), Query Frame = 3
Query:   78 MWRPPVVDMESPEAPNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRW 809
            MW PPVVDM+S  AP VLA AC+DFGFFYVENHGVSEEVM EVFRQSK FFSLG+ DK++V+ADKNNRG+TPMHE++LD   Q KGDTKEGYYIFRE    SA AA D + DDARPL GPNQWPSEEL+P WK TMQ +F+ MHA+G RL+GLLS GLGL+P+ F  C SE AH LRLLHYSAEVSDPGKGV+GAGAH+D+GL+TLLATDEVPGLQVRL+G+WLD+PPRKGAFICNLGDMLQRW
Sbjct:    1 MWAPPVVDMDSSSAPAVLAKACRDFGFFYVENHGVSEEVMREVFRQSKLFFSLGMDDKMSVRADKNNRGYTPMHEQVLDLENQTKGDTKEGYYIFREG---SAGAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFGTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLNGKWLDIPPRKGAFICNLGDMLQRW 241          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A7J7QM00_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM00_9CHLO)

HSP 1 Score: 255 bits (652), Expect = 2.240e-78
Identity = 131/242 (54.13%), Postives = 167/242 (69.01%), Query Frame = 3
Query:   90 PVVDMESPEAPNV--LATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRW 809
            P+VD+   EA     +  AC   GFFY  NHG+ +E++ EVFRQ +A F++    K+A+ AD+NNRG+TP  EE LDPA+Q +GDTKEG+Y  RE++  S E           PL GPNQWP E+L+P ++ T+ AYF ++ ALG+RL  LL+  LGL P +F    +    ALR LHY+AEVS PG+GV GAGAHSDYG+LTLLATDEVPGLQV L+G W +V P  GAFI NLGDML+RW
Sbjct:   10 PLVDLSQDEAAAAQQVYAACSGPGFFYAANHGIPQELLSEVFRQMRAAFAMPDEAKMAMLADENNRGYTPYAEETLDPAQQARGDTKEGFYFGREVSADSEEGK--------LPLHGPNQWPPEQLVPGFRLTVTAYFDALAALGMRLLRLLALSLGLPPDYFAPHFTHPMVALRPLHYTAEVSAPGQGVFGAGAHSDYGMLTLLATDEVPGLQVHLNGSWQEVAPLPGAFIVNLGDMLERW 243          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A250WWS1_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWS1_9CHLO)

HSP 1 Score: 250 bits (639), Expect = 4.360e-76
Identity = 132/262 (50.38%), Postives = 166/262 (63.36%), Query Frame = 3
Query:   90 PVVDMESPE--APNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRWRVTSCTRSCPNSQGSFKGGL 869
            PV++M   E  A  ++  AC   GFFYVENHGV  +++ E F Q+K  FSL + +K  + ADKNNRG+TP  EE LDPA Q +GDTKEG+Y  RE+   S EA         +PL GPNQWP E L+P  + T Q YF  + ALG+RL  LL+  L L P +F          LR LHYS  +SDPG+G+ GAGAH+DYG+LT+LATDEVPGLQ+R +G+W  V PR GAFI NLGDM++RW           + GSFK  L
Sbjct:   37 PVINMALAEGDAAKLVRDACMGPGFFYVENHGVDSQLINETFSQTKKLFSLPLEEKKRLLADKNNRGWTPYQEETLDPAVQKQGDTKEGFYFGREVPADSPEAL--------KPLHGPNQWPEESLMPGLRDTYQQYFEELRALGMRLLRLLALALDLPPLYFHPYFEPPMIMLRPLHYSGVISDPGEGIFGAGAHTDYGMLTILATDEVPGLQIRQNGKWTHVSPRNGAFIINLGDMVERW-----------TNGSFKSTL 279          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A7S0S1L0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1L0_9CHLO)

HSP 1 Score: 243 bits (621), Expect = 1.520e-73
Identity = 126/242 (52.07%), Postives = 155/242 (64.05%), Query Frame = 3
Query:   90 PVVDMESPE--APNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRW 809
            PV+D+   E      L  AC+  GFFY+  HGVSEE+MG +F  ++A F L +  K A+ AD NNRG+TP  EE LDP+ Q  GDTKEG+Y  R++   S EA+         PL GPNQWP EEL+P ++AT +AY  +M ALG R+  +L+  LGL P+ FE   +     LR LHY A  SDP  GV GAGAH+DYGLLT LATDEVPGLQ+   G W DV PR G  I NLGDML+RW
Sbjct:   23 PVIDLSQGEEQVAAALKHACESVGFFYLAGHGVSEELMGRLFAANRALFGLPLEQKRAMTADANNRGWTPFREETLDPSVQTTGDTKEGFYFGRDIPADSPEAS--------LPLHGPNQWPREELVPGYRATAEAYLAAMMALGARMLRVLALSLGLPPAHFERHFTSPMVFLRPLHYDATRSDPDAGVFGAGAHTDYGLLTFLATDEVPGLQIHAGGAWRDVAPRPGCLIVNLGDMLERW 256          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A150G899_GONPE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G899_GONPE)

HSP 1 Score: 242 bits (618), Expect = 4.140e-73
Identity = 131/262 (50.00%), Postives = 158/262 (60.31%), Query Frame = 3
Query:   90 PVVDMESPE--APNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLD--------------------GEWLDVPPRKGAFICNLGDMLQRW 809
            PV+D+   E  A   +  AC   GFFYV NHGV   ++ E F Q +A F L +  K+A+  D NNRG+TP  EE LDPARQ  GDTKEG+Y  RE+   S EA+        +PL GPNQWP  +LLP ++   Q YF +M ALG+RL  LL+  L L P +F         ALR LHYS EVSDPG GV GAGAHSDYG+LT+LATDEVPGLQ+ L                     G W DVPP+ GAF+ NLGDML+RW
Sbjct:    5 PVIDLGQTEDAAAAEVRAACTSSGFFYVRNHGVPAPLVEEAFAQQRALFGLPLEAKMAMLQDANNRGYTPFREETLDPARQAHGDTKEGFYFGREVPLDSPEAS--------KPLHGPNQWPDPQLLPDYRRVTQQYFDAMTALGMRLLRLLALSLELPPDYFAPMFDAPMLALRPLHYSGEVSDPGAGVFGAGAHSDYGMLTILATDEVPGLQIWLPDGGPEAAADAGAARGEEGVGGRWWDVPPQPGAFVINLGDMLERW 258          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A0D2LKH6_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LKH6_9CHLO)

HSP 1 Score: 239 bits (611), Expect = 5.490e-72
Identity = 129/253 (50.99%), Postives = 160/253 (63.24%), Query Frame = 3
Query:   90 PVVDMESP--EAPNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIK-----------GDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRW 809
            P++D+ +P  EA   L  AC+  GFF    HGV ++V+  +F Q ++ F L I+DK+A+  D+NNRG+TP+ EE LDP  Q K           GDTKEGYYI RE+   S EA          PL GPN WP E+LLP ++AT +AYF S+ ALG RL  LL+  L LEP  F+         LR LHYSAEVS PG GV GAGAHSDYG+LT+LATD  PGLQV + G W+DVP     F+CNLGDML+RW
Sbjct:    9 PIIDLSAPDPEAAAALGAACRGSGFFLAAGHGVPDDVVISMFDQIRSLFDLPIADKMALLQDENNRGYTPLLEETLDPGSQTKARAIDVFGFAQGDTKEGYYIGREVPADSPEAQ--------LPLHGPNLWPPEKLLPGFRATTEAYFSSVTALGHRLLRLLAISLDLEPGHFDPFFDPPMVFLRPLHYSAEVSRPGDGVFGAGAHSDYGMLTVLATDGQPGLQVHVGGAWVDVPAAPRCFVCNLGDMLERW 253          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: A0A836BN92_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BN92_9CHLO)

HSP 1 Score: 239 bits (609), Expect = 1.470e-71
Identity = 126/265 (47.55%), Postives = 161/265 (60.75%), Query Frame = 3
Query:   90 PVVDMESPE--APNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLD-----------------------GEWLDVPPRKGAFICNLGDMLQRW 809
            P++DM  PE  A   +A AC   GFFYV +HGV +E++  VF Q +A F+L   DK+A+  D+NNRG+TP  EE LDPARQ  GDTKEG+Y  RE+A  S EA+        +PL GPNQWP    LP ++     Y+ +++ LG+RL  LL+  LGL P  F     +    LR LHY+AE+SDPG GV GAGAH+DYG++T+LATD VPGLQ+ L                        G W DVPP  GAF+ NLGDML+RW
Sbjct:   17 PLIDMSLPEPQAAAQVAAACARSGFFYVTHHGVPQELVDAVFEQQRAVFALPQEDKMALLQDRNNRGYTPFREETLDPARQRHGDTKEGFYFGREVAADSPEAS--------KPLHGPNQWPDPARLPHYRQATWQYYEALYGLGMRLLRLLALSLGLPPDHFHPAFEQPMVTLRPLHYTAEISDPGAGVFGAGAHTDYGMVTILATDTVPGLQIWLPEGEGAEGQGAGHDAAEAAPGPGRGRWWDVPPVPGAFVVNLGDMLERW 273          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: D8T5M6_SELML (Fe2OG dioxygenase domain-containing protein n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T5M6_SELML)

HSP 1 Score: 237 bits (605), Expect = 2.750e-71
Identity = 124/248 (50.00%), Postives = 161/248 (64.92%), Query Frame = 3
Query:   96 VDMESPEAPNV---LATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFE--GCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQVRLDGE-----WLDVPPRKGAFICNLGDMLQRW 809
            +D+  P+   +   L  AC + GFFYV NHG+SEE M +VF QS+ FF+L + +K+ V  D+N RG+TP+ +E LDPA+Q  GD KEGYYI RE++ +   A D        PL+GPNQWPS + LP WK TM+ YF     L  +L  L++  L LE SFF+  G       A+RLLHY A+ SDP +G  GAGAHSDYG+LTLLA+D VPGLQ+  + +     W +V P KGAFI NLGDML+RW
Sbjct:   12 IDLSCPDVERLAQQLRKACLETGFFYVANHGISEEFMAQVFEQSRKFFTLPLEEKMKVYQDENFRGYTPIFDEKLDPAKQRLGDAKEGYYIRREVSGSDPRAKD--------PLQGPNQWPSPDTLPEWKQTMEMYFDQAEKLSRKLIKLIALALELEESFFDKPGMFDHPMAAVRLLHYPAQASDPEEGFFGAGAHSDYGMLTLLASDGVPGLQICKEKDAKEQVWTNVQPLKGAFIVNLGDMLERW 251          
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Match: K8YRZ9_NANGC (Fe2OG dioxygenase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRZ9_NANGC)

HSP 1 Score: 238 bits (606), Expect = 3.750e-71
Identity = 123/249 (49.40%), Postives = 162/249 (65.06%), Query Frame = 3
Query:   90 PVVDMESPE-APNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAFFSLGISDK--LAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMARTSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRLSGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSDYGLLTLLATDEVPGLQV------RLDGEWLDVPPRKGAFICNLGDMLQRW 809
            P+VD+ +PE AP +L  AC+DFGFFY+ NHGV + ++ ++  +SKAFFSL + +K  ++V+ +K NRG+T   EE LDP RQ +GDTKEG+Y+ RE+A  S EA        + PL GPN WP    LPRW+  M AYF ++ +LG+R   LL   LGL     +   +    ALRLLHYS + S+P +GV  AGAH+DYG+ T L TD  PGLQV      + DG W +VP  +GAFI NLGDMLQRW
Sbjct:   23 PIVDLAAPEEAPRILYDACRDFGFFYLINHGVPQALIDDMLTESKAFFSLPLDEKEKVSVRHNKINRGYTAFEEETLDPTRQTRGDTKEGFYLGREVAMESEEAR-------SFPLHGPNVWPDPVKLPRWRPVMNAYFTALSSLGLRTVRLLLRALGLPEHHLDDTFTRPMAALRLLHYSTQASNPSEGVYAAGAHTDYGMFTFLMTDHTPGLQVWRGGAGQEDGSWQEVPAVEGAFIVNLGDMLQRW 264          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11147.1032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9W6_9PHAE9.100e-14782.26Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
D7FYW9_ECTSI2.720e-13176.64Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7J7QM00_9CHLO2.240e-7854.13Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A250WWS1_9CHLO4.360e-7650.38Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S0S1L0_9CHLO1.520e-7352.07Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A150G899_GONPE4.140e-7350.00Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A0D2LKH6_9CHLO5.490e-7250.99Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A836BN92_9CHLO1.470e-7147.55Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
D8T5M6_SELML2.750e-7150.00Fe2OG dioxygenase domain-containing protein n=5 Ta... [more]
K8YRZ9_NANGC3.750e-7149.40Fe2OG dioxygenase domain-containing protein n=3 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11147contigL-elsbetiae_contig11147:1501..6264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score426.0
Seed ortholog evalue1.3e-116
Seed eggNOG ortholog2880.D7FYW8
KEGG koko:K06901
KEGG TC2.A.1.40
Hectar predicted targeting categoryother localisation
GOsGO:0007275,GO:0008150,GO:0009653,GO:0009791,GO:0010015,GO:0010101,GO:0010102,GO:0010468,GO:0019222,GO:0022622,GO:0032501,GO:0032502,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050789,GO:0060255,GO:0065007,GO:0090696,GO:0090697,GO:0090698,GO:0099402,GO:1905392
EggNOG free text desc.Belongs to the iron ascorbate-dependent oxidoreductase family
EggNOG OGsCOG3491@1,KOG0143@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionGibberellin 2-beta-dioxygenase
Ec32 orthologEc-19_002750.1
Exons6
Model size1351
Cds size819
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11147.1032.1prot_L-elsbetiae_contig11147.1032.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11147 1578..5809 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.7246096-UTR-L-elsbetiae_contig11147:1500..15771622815328.7246096-UTR-L-elsbetiae_contig11147:1500..1577Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11147 1501..1577 +
1691682841.8825598-UTR-L-elsbetiae_contig11147:1500..15771691682841.8825598-UTR-L-elsbetiae_contig11147:1500..1577Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11147 1501..1577 +
1622815328.806627-UTR-L-elsbetiae_contig11147:5809..62641622815328.806627-UTR-L-elsbetiae_contig11147:5809..6264Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11147 5810..6264 +
1691682841.94854-UTR-L-elsbetiae_contig11147:5809..62641691682841.94854-UTR-L-elsbetiae_contig11147:5809..6264Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11147 5810..6264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.7355952-CDS-L-elsbetiae_contig11147:1577..16371622815328.7355952-CDS-L-elsbetiae_contig11147:1577..1637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 1578..1637 +
1691682841.8935628-CDS-L-elsbetiae_contig11147:1577..16371691682841.8935628-CDS-L-elsbetiae_contig11147:1577..1637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 1578..1637 +
1622815328.747068-CDS-L-elsbetiae_contig11147:2641..28481622815328.747068-CDS-L-elsbetiae_contig11147:2641..2848Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 2642..2848 +
1691682841.9030588-CDS-L-elsbetiae_contig11147:2641..28481691682841.9030588-CDS-L-elsbetiae_contig11147:2641..2848Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 2642..2848 +
1622815328.7603729-CDS-L-elsbetiae_contig11147:3485..36101622815328.7603729-CDS-L-elsbetiae_contig11147:3485..3610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 3486..3610 +
1691682841.9130073-CDS-L-elsbetiae_contig11147:3485..36101691682841.9130073-CDS-L-elsbetiae_contig11147:3485..3610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 3486..3610 +
1622815328.7729893-CDS-L-elsbetiae_contig11147:4144..43041622815328.7729893-CDS-L-elsbetiae_contig11147:4144..4304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 4145..4304 +
1691682841.9238794-CDS-L-elsbetiae_contig11147:4144..43041691682841.9238794-CDS-L-elsbetiae_contig11147:4144..4304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 4145..4304 +
1622815328.7836263-CDS-L-elsbetiae_contig11147:4905..49801622815328.7836263-CDS-L-elsbetiae_contig11147:4905..4980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 4906..4980 +
1691682841.9315715-CDS-L-elsbetiae_contig11147:4905..49801691682841.9315715-CDS-L-elsbetiae_contig11147:4905..4980Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 4906..4980 +
1622815328.794581-CDS-L-elsbetiae_contig11147:5617..58091622815328.794581-CDS-L-elsbetiae_contig11147:5617..5809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 5618..5809 +
1691682841.939348-CDS-L-elsbetiae_contig11147:5617..58091691682841.939348-CDS-L-elsbetiae_contig11147:5617..5809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11147 5618..5809 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11147.1032.1

>prot_L-elsbetiae_contig11147.1032.1 ID=prot_L-elsbetiae_contig11147.1032.1|Name=mRNA_L-elsbetiae_contig11147.1032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MWRPPVVDMESPEAPNVLATACKDFGFFYVENHGVSEEVMGEVFRQSKAF
FSLGISDKLAVKADKNNRGFTPMHEEILDPARQIKGDTKEGYYIFREMAR
TSAEAADDEKKDDARPLKGPNQWPSEELLPRWKATMQAYFLSMHALGVRL
SGLLSAGLGLEPSFFEGCTSEMAHALRLLHYSAEVSDPGKGVLGAGAHSD
YGLLTLLATDEVPGLQVRLDGEWLDVPPRKGAFICNLGDMLQRWRVTSCT
RSCPNSQGSFKGGLGWNEEIIL*
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mRNA from alignment at L-elsbetiae_contig11147:1501..6264+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11147.1032.1 ID=mRNA_L-elsbetiae_contig11147.1032.1|Name=mRNA_L-elsbetiae_contig11147.1032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4764bp|location=Sequence derived from alignment at L-elsbetiae_contig11147:1501..6264+ (Laminarionema elsbetiae ELsaHSoW15)
GAGCAAAGCGAGTGGTGTGCGCGCGGGGCTGGGTTCGGCGTGAAGGTGAA GAAACCAAAACACTTCCCTTCAAAACCATGTGGAGGCCTCCGGTAGTGGA CATGGAGAGTCCGGAAGCACCGAATGTTCTCGCAACGGTGAGCCGGCAGA GTAGCCAGATTGGATGGAGGAGGTGGCGCCACTAGTCTGTCTAGTAGTCT GCGCTGCTTCGTGCCCACCACTTTGTTGTAAACCGTGCTGCAAGAATGAA AAGCAAACCAACACGAGAAACACTTTGTTGGAGTTTCCAAAAGAACTCCA CTAGAACAGTAGTAGGACGGGAAGGCAATTCCCCCGTAGGGCGACGTTTT CGCCGCCCACGAGGAGGCTAGCTTGAGATGAGCACATCTCTCCTCGTTCA GTCTACAGCAGGATATCGGTTCTTCAGGAGGGTGCCGAGTTAGGCGTGTG GGCGGGTCCTGCGGCCGATGTCGTGGGGTACGTAATCACTTCGTAAGAGA ATTCCACAAAATACGCGGGTGCATTCCGGATCTGCGCGAATACAGGGAGA GCGCGGGCATCTCCTATGTACATCAACCCGTTTTGCTGCCTGTTATCTGC CAATGCTGCGAAGTCGGTTCGGACGTTTGCTCGGTAAAGTTTGGAGCTGC TGGTGCGCAGGTAAAACCGATCAAAGCTGTGCGGACGGTGGAGGATTAAC ACGGCTATGGTTGCCATCTCAAAAAAAGAAACAAAATTCTGTGCATCCAA CCGCGAAGCTCAAGCGCAGCTACTCGGCTCATTGTTTTGAACACCTGCCA TCTAACAACTAAGGCATAGATCGCCTGAGAATATGCTTACCGTGTGGTTC GAACCTGTGTCCGTCTTCCTTTTAGCAGCGAGTAGTCTACCTTTTCGTCG CACGAGTCAACTCAGGTTTTCCTGTGAGCGGCCCACCGGCTTCGGTTTTT GTCCGATGTCAGTCAGAAAAACGCAACAGGCAGCACGTTTTGTGCTCGGG ATCAATGCAGTGTTAGTACGGACAAGGGGGTTTGCCGAAGAGACGAGCTC GCAAGTGTCTGAGGCAGCAGAGTTTTCCCGAGAGACCAGTCGTCGAAAGA TAAAAAATTGATCCTTTGGTATTTCCTCCTCGCCGACGCAGGCGTGCAAA GACTTCGGGTTCTTCTACGTGGAAAACCATGGCGTTTCGGAGGAGGTGAT GGGAGAGGTCTTCCGGCAGTCGAAGGCGTTTTTCTCCCTCGGCATCAGCG ACAAGTTGGCTGTCAAGGCCGACAAGAACAACCGTGGCTTCACCCCCATG CACGAGGAGATCCTGGACCCCGCGAGACAGATCAAGGGGGATACCAAGGT GCGCAAATGTTTCTTCCAGTTCTTGCTGCCTAGCTCCGAGTAGTTCAGCG CCATCGTTGTTTGACGTGAATAGCGGGGAGATGGTGGTGGCAGTGGTGAT GGCGTGGTGTGAGGTTGGTGGTTGACAGTGAGCAGCAGTTGTGGCGTTAC AACGCAACATTTGGCAAACTGTTGCTGGCGGCAGCAGTCGGCATCATCGG TTTGTTCATGTGCTCGCCCTGTTCGTGGGTAGTTCTGCGAGGCCCAAAAT AACCGCGATTTTGGTCCGTACGCCCTGGGCCCGTACATTCTGCAGCGACT TTAAGAGAGTACCCTTTGATACAATGGCCACTCAAGTTGCATTTTGTGCT ATATAGAGGTGATCCGATCCCACGGATCACGGAGATGAATGTTTGGAGTC TTGTTTATGTCCAACATGTGAGCTGCCTGAATGGCGGCTCGAACTAGGGG GGCAGCGGACCAGATAATCATGTAGGGGAGGAGATTAGCGCCAAGAAATG GCGGGGCACTCAACGTCAACGGAGGGAACGGCAAACGTACACGATGTCAA TAGACAAACCAGTGTCTCAGTGCAAACAATGCTAACACTTCCCTGCACGC TGCCGGCCGCGTGTGGTGCTTACTCTGCCTGGCAGGAAGGGTACTACATA TTCCGAGAGATGGCTCGCACGTCAGCAGAAGCTGCCGATGATGAGAAAAA AGACGACGCCAGGCCCCTGAAGGGGCCCAACCAATGGCCCTCGGAAGAGC TTCTGCCGCGGTGGGTTACGAAACCGAGCTCACTCTAGAGACGCCTTTAA CAAGCCGTCCGAATTTTCCGCTATTGATTCTCTTGCAACGGTCCTCAATT TCCTCAGCCTATCTGTGGCAATGCCGTTAACTCATCGAATCTCGTAGCCT TGGCTTTAAGCTTCAAGCTGGTGGTCACCATTCGCCAAGACCAGCCGCGG CCGTAGTCCGGCTGTCTGTGCTTCCTTCTGTGGCGGCCTGCGCTGGAGTT TTGTTTCACTGATACTGCGGCAGAGTTGAACACTAGGACGATTTGGATGC CAATGGTCGACATGACGACACCACCCCGCAAGGCGGAAATATTTGCTTTG AAGGTTCATCGATAACTTGCTCCACCGGAAGGTTGATTTTTCGCGGATGG ATTCGTGCTTCAGGGTTTGTATGTCATACGTGTTGAGTATTCACTCGGAT TGGCATGGCAGGACAGCGCACCCACTACCACCGCCACTACCATCACCATT CGTCATCATCAACCACAACGACAACGACAACAACGCAAACGCAGGTGGAA GGCTACGATGCAAGCCTACTTTTTGTCGATGCACGCGCTGGGAGTGCGCC TGTCCGGACTGCTGTCGGCCGGCCTTGGGCTCGAGCCATCATTCTTTGAG GGGTGCACTTCCGAGATGGCGCACGCTCTGCGCCTGCTTCACTATTCGGC CGAGGTGGGGTAATTTCGGTCGTGATTTCTTTGCCGTCTTTATTCTATGT ACATAAGTAAGCACCAACGTTTGTTCATGTACTGCCGGTGCTGAGCCTCG GCGTTTAGTGCGTGTAAGCTAGTGAGGTAGCATACATTGGGTCGACTACT ACTCGTTTCCGATGTGGTGGTTGGGATTCCAACCACGCGAGCGAGGCCTC AGCTACTGAGCGATTAGCCAACGCGCTAGCTTTGTTCCAGCACGTTACGA AGGTGGAAAAGGTGCGTTGGTCGATCTGTGAGGACACATTTCTCGTTTAC CTTGATTTGTGTTTTAGTTTCGTGTCTATGTCTTTTCAGTCACGATTGCT CACGGGGGTGGGCTGTTGACGTTGGCGAGGTACACAAGAAGCAAGAAGAG TCTGCTGGTGGAGAGAAGATCGGTCAGTTGCCCGCACACCCTCCAATCGA AAATCAAACTGTTATACCGTGAGCTGCTGCTGCCTGCTGCAGCCTTCATT GCGCACAGCACTCTGAGATGTTTGTGGGCGGGTTGCGCACTATTGCGCGT TGTCTGTGCACCCAGCTCAGTGATAGGTGCCCTGTTTTGACTTTGCCGCC GTCAGGTTTCAGACCCAGGGAAGGGCGTGCTGGGTGCAGGGGCTCACTCG GATTACGGGTTACTCACTTTGCTCGCCACAGTGAGTGTGCATGTACAGAA CTGGTTTCTTCCTCTTCCGATCCTGAGTCTCGAGTCTAGTCAATGGTACC CCAGGCAACGGAAATATGTTGTGAACGTTGAGTCAGTCTGCACGCCTCTC TCTCATCAGGGGTGGTAAACGGCTTTTAAGGGTGCCGGTATGCGCTCGGG CATTAATAGCGTGTTTTCCGGTGTTGCCCCGTGACGCCCCCTCTGCTTTC CTTGCCCCGCTTTTCCGTGCCCCCGCGCACTATAACTATGCAGTTACGCT GTAACTGGTGTTGGTTTTGACAGCGGTTTGACGTCGGTTGGACATCGGAT GGATTGCGCACCGACCGTGCTTGTGTCGTCACGAGGCCGCCTACTGGTGC TTTGGCTGGCAATTCATGTTTAACGAAAAACGTTCTCATGTTGAACCGAG CCTTCTTGGTATAATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATGTTG TTGTTGTTGCTGTTGTTGTTGCACTTGCTCTTGGTGCAGACGGTTTTGAC GGCTTGAACAGGTAGACATCCGCGCTTTTGCCTGCGATGCTTTATACTCT GTTTTCACTCTTGCCAGGACGAGGTGCCGGGGCTGCAGGTGAGGCTGGAC GGAGAGTGGCTGGACGTGCCTCCCAGAAAAGGGGCCTTCATCTGCAACCT CGGCGACATGCTCCAGAGATGGCGAGTGACATCCTGCACGCGTTCCTGCC CAAACTCGCAAGGGTCTTTTAAGGGTGGCTTGGGGTGGAATGAAGAAATT ATATTGTAGGAATAAGCAATGGCGCCTGCTTTGTGCTTCCCCCCAGGTAA CGCCCTTCCCCGTCCCACCCAGAATCAGGGCTCCTAATCACCAAAGGTCG TGGCCGAAAAAGTTGTCAAGTACTAAAAGTGGCGGCGCGAAAGTTCCGCA CAACGATGATTGTCACCTAACTGTCAATATCAACCCCACTTGGCCTTTTC TAAAATCCATTTATGGGTTTTAGTCCTTCTCGAACCAAACAGTTCAATCC TAAAAGCGTAAACCCGCCGCATTTTTAGGCCCTTTTTTTCAAAAAAACCC GCCGCATTTTGAGACTAATTTTTTTCAAAAACGCGTTCTCGCGTTTTCTT GCCGCACACGTTACCAACGGGCGTCATTTTTCGCCGGTGAACGCATCTGG GCCTCAAGGTTATGCACCCCCAATATCCCCTCTCGCCGAGGCCGGGTGCG AGAGAAAATGCCCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11147:1501..6264+

>mRNA_L-elsbetiae_contig11147.1032.1 ID=mRNA_L-elsbetiae_contig11147.1032.1|Name=mRNA_L-elsbetiae_contig11147.1032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1638bp|location=Sequence derived from alignment at L-elsbetiae_contig11147:1501..6264+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGAGGCCTCCGGTAGTGGACATGGAGAGTCCGGAAGCACCGAATGT
TCTCGCAACGATGTGGAGGCCTCCGGTAGTGGACATGGAGAGTCCGGAAG
CACCGAATGTTCTCGCAACGGCGTGCAAAGACTTCGGGTTCTTCTACGTG
GAAAACCATGGCGTTTCGGAGGAGGTGATGGGAGAGGTCTTCCGGCAGTC
GAAGGCGTTTTTCTCCCTCGGCATCAGCGACAAGTTGGCTGTCAAGGCCG
ACAAGAACAACCGTGGCTTCACCCCCATGCACGAGGAGATCCTGGACCCC
GCGAGACAGATCAAGGGGGATACCAAGGCGTGCAAAGACTTCGGGTTCTT
CTACGTGGAAAACCATGGCGTTTCGGAGGAGGTGATGGGAGAGGTCTTCC
GGCAGTCGAAGGCGTTTTTCTCCCTCGGCATCAGCGACAAGTTGGCTGTC
AAGGCCGACAAGAACAACCGTGGCTTCACCCCCATGCACGAGGAGATCCT
GGACCCCGCGAGACAGATCAAGGGGGATACCAAGGAAGGGTACTACATAT
TCCGAGAGATGGCTCGCACGTCAGCAGAAGCTGCCGATGATGAGAAAAAA
GACGACGCCAGGCCCCTGAAGGGGCCCAACCAATGGCCCTCGGAAGAGCT
TCTGCCGCGGAAGGGTACTACATATTCCGAGAGATGGCTCGCACGTCAGC
AGAAGCTGCCGATGATGAGAAAAAAGACGACGCCAGGCCCCTGAAGGGGC
CCAACCAATGGCCCTCGGAAGAGCTTCTGCCGCGGTGGAAGGCTACGATG
CAAGCCTACTTTTTGTCGATGCACGCGCTGGGAGTGCGCCTGTCCGGACT
GCTGTCGGCCGGCCTTGGGCTCGAGCCATCATTCTTTGAGGGGTGCACTT
CCGAGATGGCGCACGCTCTGCGCCTGCTTCACTATTCGGCCGAGGTGGAA
GGCTACGATGCAAGCCTACTTTTTGTCGATGCACGCGCTGGGAGTGCGCC
TGTCCGGACTGCTGTCGGCCGGCCTTGGGCTCGAGCCATCATTCTTTGAG
GGGTGCACTTCCGAGATGGCGCACGCTCTGCGCCTGCTTCACTATTCGGC
CGAGGTTTCAGACCCAGGGAAGGGCGTGCTGGGTGCAGGGGCTCACTCGG
ATTACGGGTTACTCACTTTGCTCGCCACAGTTTCAGACCCAGGGAAGGGC
GTGCTGGGTGCAGGGGCTCACTCGGATTACGGGTTACTCACTTTGCTCGC
CACAGACGAGGTGCCGGGGCTGCAGGTGAGGCTGGACGGAGAGTGGCTGG
ACGTGCCTCCCAGAAAAGGGGCCTTCATCTGCAACCTCGGCGACATGCTC
CAGAGATGGCGAGTGACATCCTGCACGCGTTCCTGCCCAAACTCGCAAGG
GTCTTTTAAGGGTGGCTTGGGGTGGAATGAAGAAATTATATTGTAGGACG
AGGTGCCGGGGCTGCAGGTGAGGCTGGACGGAGAGTGGCTGGACGTGCCT
CCCAGAAAAGGGGCCTTCATCTGCAACCTCGGCGACATGCTCCAGAGATG
GCGAGTGACATCCTGCACGCGTTCCTGCCCAAACTCGCAAGGGTCTTTTA
AGGGTGGCTTGGGGTGGAATGAAGAAATTATATTGTAG
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